AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37596

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37596.t1 MTR_5g088640 54.510 255 61 8 21 266 13 221 9.59e-76 233
MS.gene37596.t1 MTR_5g488170 54.118 255 62 8 21 266 13 221 1.32e-74 229
MS.gene37596.t1 MTR_5g088080 54.118 255 62 8 21 266 13 221 1.37e-74 229
MS.gene37596.t1 MTR_5g088150 54.118 255 62 8 21 266 13 221 1.37e-74 229
MS.gene37596.t1 MTR_5g488210 54.118 255 62 8 21 266 13 221 1.37e-74 229
MS.gene37596.t1 MTR_5g062790 57.333 225 54 7 21 238 10 199 3.04e-72 225
MS.gene37596.t1 MTR_5g088610 50.385 260 94 3 19 274 8 236 5.68e-66 211
MS.gene37596.t1 MTR_1g085770 48.438 256 83 7 15 259 6 223 2.41e-59 192
MS.gene37596.t1 MTR_1g085880 51.376 218 71 5 15 226 6 194 2.43e-58 186
MS.gene37596.t1 MTR_1g083630 46.311 244 105 11 10 249 2 223 5.31e-49 172
MS.gene37596.t1 MTR_4g128190 51.176 170 58 5 15 174 6 160 4.46e-48 161
MS.gene37596.t1 MTR_8g042410 41.935 248 107 7 13 233 20 257 2.41e-47 166
MS.gene37596.t1 MTR_1g021230 52.113 142 67 1 20 161 57 197 7.21e-44 155
MS.gene37596.t1 MTR_3g052430 59.167 120 46 2 20 139 41 157 1.32e-42 154
MS.gene37596.t1 MTR_3g052450 59.167 120 46 2 20 139 40 156 1.73e-42 153
MS.gene37596.t1 MTR_3g011610 47.887 142 66 2 3 137 13 153 2.28e-41 150
MS.gene37596.t1 MTR_2g088170 55.714 140 56 2 8 142 17 155 9.12e-41 147
MS.gene37596.t1 MTR_1g112760 49.231 130 62 3 16 142 9 137 1.14e-39 139
MS.gene37596.t1 MTR_3g077110 52.991 117 53 2 16 131 8 123 2.22e-39 141
MS.gene37596.t1 MTR_4g105130 52.137 117 54 2 16 131 8 123 4.42e-39 140
MS.gene37596.t1 MTR_5g007370 53.435 131 55 4 17 142 7 136 9.32e-39 138
MS.gene37596.t1 MTR_7g110830 55.263 114 49 2 19 131 11 123 1.84e-38 139
MS.gene37596.t1 MTR_1g017000 42.353 170 93 4 18 185 10 176 2.39e-38 136
MS.gene37596.t1 MTR_5g029840 53.982 113 50 2 20 131 12 123 5.21e-38 137
MS.gene37596.t1 MTR_4g478180 54.098 122 52 3 20 138 13 133 6.41e-38 137
MS.gene37596.t1 MTR_4g091490 53.448 116 52 2 17 131 10 124 6.52e-38 137
MS.gene37596.t1 MTR_1g085640 53.509 114 51 2 19 131 11 123 1.03e-37 138
MS.gene37596.t1 MTR_2g011660 54.310 116 51 2 17 131 10 124 1.30e-37 136
MS.gene37596.t1 MTR_1g085040 53.043 115 52 2 18 131 10 123 1.53e-37 137
MS.gene37596.t1 MTR_2g089620 51.639 122 55 3 20 138 12 132 6.25e-37 134
MS.gene37596.t1 MTR_3g074520 53.097 113 51 2 20 131 12 123 1.16e-36 134
MS.gene37596.t1 MTR_7g115650 52.885 104 48 1 20 123 12 114 1.46e-36 130
MS.gene37596.t1 MTR_2g089450 54.808 104 46 1 20 123 12 114 1.65e-36 131
MS.gene37596.t1 MTR_1g076150 54.808 104 46 1 20 123 12 114 1.93e-36 131
MS.gene37596.t1 MTR_8g017440 48.739 119 59 2 19 136 11 128 2.91e-36 133
MS.gene37596.t1 MTR_4g082290 50.413 121 58 2 20 139 12 131 3.44e-36 134
MS.gene37596.t1 MTR_7g076740 54.386 114 49 3 20 131 12 124 6.13e-36 131
MS.gene37596.t1 MTR_4g082230 50.413 121 58 2 20 139 12 131 8.63e-36 133
MS.gene37596.t1 MTR_7g111290 58.000 100 41 1 19 118 11 109 9.56e-36 132
MS.gene37596.t1 MTR_1g100653 46.032 126 67 1 20 145 12 136 1.15e-35 130
MS.gene37596.t1 MTR_1g043080 52.885 104 48 1 20 123 12 114 1.59e-35 129
MS.gene37596.t1 MTR_4g065017 49.167 120 59 2 15 133 12 130 1.96e-35 130
MS.gene37596.t1 MTR_8g017500 48.246 114 57 2 19 131 11 123 2.48e-35 130
MS.gene37596.t1 MTR_3g461490 50.435 115 55 2 18 131 10 123 3.05e-35 130
MS.gene37596.t1 MTR_0251s0050 50.000 108 53 1 20 127 13 119 4.60e-35 128
MS.gene37596.t1 MTR_7g011170 47.581 124 63 2 20 142 12 134 4.97e-35 129
MS.gene37596.t1 MTR_2g099740 50.877 114 54 2 19 131 11 123 5.38e-35 130
MS.gene37596.t1 MTR_6g012690 48.000 125 63 2 20 143 12 135 6.92e-35 129
MS.gene37596.t1 MTR_0008s0390 51.923 104 49 1 20 123 13 115 8.12e-35 127
MS.gene37596.t1 MTR_4g073420 52.252 111 51 2 22 131 14 123 8.79e-35 127
MS.gene37596.t1 MTR_1g043050 43.421 152 80 3 20 166 12 162 9.32e-35 127
MS.gene37596.t1 MTR_8g017540 49.123 114 56 2 19 131 57 169 1.87e-34 129
MS.gene37596.t1 MTR_8g095390 54.054 111 49 2 22 131 14 123 2.60e-34 127
MS.gene37596.t1 MTR_3g097450 53.153 111 50 2 22 131 14 123 3.11e-34 126
MS.gene37596.t1 MTR_2g064160 49.123 114 56 2 19 131 10 122 4.48e-34 126
MS.gene37596.t1 MTR_8g031360 52.632 114 51 3 20 131 13 125 5.10e-34 126
MS.gene37596.t1 MTR_6g009430 49.558 113 55 2 20 131 12 123 5.61e-34 127
MS.gene37596.t1 MTR_4g029540 50.806 124 58 3 20 141 10 132 6.02e-34 125
MS.gene37596.t1 MTR_0008s0470 50.962 104 50 1 20 123 13 115 6.25e-34 125
MS.gene37596.t1 MTR_5g079670 47.826 115 58 2 18 131 9 122 7.00e-34 123
MS.gene37596.t1 MTR_1g110460 44.094 127 68 2 1 127 9 132 7.40e-34 125
MS.gene37596.t1 MTR_2g097910 51.923 104 49 1 20 123 20 122 7.86e-34 126
MS.gene37596.t1 MTR_8g098860 49.091 110 54 2 19 127 11 119 1.23e-33 125
MS.gene37596.t1 MTR_1g017140 55.238 105 45 2 20 123 12 115 2.13e-33 125
MS.gene37596.t1 MTR_7g096930 51.923 104 49 1 20 123 12 114 2.40e-33 124
MS.gene37596.t1 MTR_2g089420 49.533 107 53 1 17 123 8 113 3.01e-33 127
MS.gene37596.t1 MTR_3g028740 52.381 105 49 1 19 123 21 124 3.64e-33 125
MS.gene37596.t1 MTR_5g010020 51.485 101 48 1 19 119 11 110 3.71e-33 124
MS.gene37596.t1 MTR_1g062940 51.923 104 49 1 20 123 6 108 5.14e-33 121
MS.gene37596.t1 MTR_8g020490 52.475 101 47 1 19 119 7 106 6.18e-33 122
MS.gene37596.t1 MTR_6g006030 50.476 105 51 1 19 123 13 116 7.92e-33 120
MS.gene37596.t1 MTR_4g097570 57.000 100 41 2 20 118 12 110 9.83e-33 122
MS.gene37596.t1 MTR_2g067420 55.446 101 44 1 19 119 13 112 1.10e-32 123
MS.gene37596.t1 MTR_7g035075 49.524 105 52 1 19 123 13 116 1.31e-32 120
MS.gene37596.t1 MTR_5g078140 52.632 114 52 2 20 132 12 124 1.61e-32 122
MS.gene37596.t1 MTR_3g065440 53.097 113 51 2 20 131 12 123 1.66e-32 122
MS.gene37596.t1 MTR_5g014990 54.286 105 46 2 20 123 12 115 1.77e-32 122
MS.gene37596.t1 MTR_4g485530 45.600 125 66 2 15 138 7 130 1.99e-32 119
MS.gene37596.t1 MTR_4g057635 47.967 123 59 3 20 141 12 130 2.43e-32 122
MS.gene37596.t1 MTR_4g102380 50.000 114 55 2 20 132 12 124 3.87e-32 120
MS.gene37596.t1 MTR_4g125520 52.000 100 47 1 20 119 12 110 4.07e-32 121
MS.gene37596.t1 MTR_3g083540 46.903 113 58 2 20 131 41 152 5.23e-32 120
MS.gene37596.t1 MTR_2g095520 53.465 101 45 2 20 119 12 111 7.21e-32 120
MS.gene37596.t1 MTR_8g027345 45.082 122 66 1 20 141 12 132 7.86e-32 120
MS.gene37596.t1 MTR_5g042030 50.442 113 54 2 20 131 7 118 8.18e-32 120
MS.gene37596.t1 MTR_7g010210 50.000 108 52 2 20 126 12 118 1.62e-31 119
MS.gene37596.t1 MTR_7g010210 50.000 108 52 2 20 126 12 118 1.96e-31 120
MS.gene37596.t1 MTR_0063s0090 52.000 100 47 1 20 119 12 110 2.30e-31 117
MS.gene37596.t1 MTR_8g006470 48.696 115 57 2 13 126 3 116 3.11e-31 118
MS.gene37596.t1 MTR_8g017350 49.138 116 56 3 18 131 10 124 3.14e-31 123
MS.gene37596.t1 MTR_0008s0280 48.113 106 54 1 21 126 13 117 3.53e-31 117
MS.gene37596.t1 MTR_4g097570 56.436 101 41 3 20 118 12 111 3.68e-31 118
MS.gene37596.t1 MTR_1g086530 46.296 108 57 1 20 127 33 139 4.23e-31 117
MS.gene37596.t1 MTR_5g078910 48.077 104 53 1 20 123 7 109 4.71e-31 118
MS.gene37596.t1 MTR_3g103570 51.429 105 49 2 20 123 12 115 5.11e-31 119
MS.gene37596.t1 MTR_1g073170 48.113 106 54 1 18 123 18 122 6.80e-31 117
MS.gene37596.t1 MTR_8g017390 47.664 107 54 2 18 123 10 115 1.14e-30 120
MS.gene37596.t1 MTR_2g034790 50.000 104 51 1 20 123 12 114 1.42e-30 117
MS.gene37596.t1 MTR_8g017340 48.276 116 57 3 18 131 10 124 1.57e-30 120
MS.gene37596.t1 MTR_4g128670 53.465 101 45 2 20 119 12 111 1.60e-30 118
MS.gene37596.t1 MTR_6g090405 39.865 148 87 2 19 165 11 157 1.76e-30 115
MS.gene37596.t1 MTR_4g121460 48.077 104 53 1 20 123 12 114 2.31e-30 117
MS.gene37596.t1 MTR_1g086510 47.525 101 52 1 20 120 21 120 2.95e-30 115
MS.gene37596.t1 MTR_1g100667 49.515 103 51 1 21 123 14 115 3.22e-30 115
MS.gene37596.t1 MTR_7g117730 48.000 100 51 1 20 119 12 110 4.75e-30 114
MS.gene37596.t1 MTR_6g055910 49.524 105 52 1 21 125 15 118 9.08e-30 114
MS.gene37596.t1 MTR_7g102110 48.571 105 52 2 20 123 12 115 1.24e-29 114
MS.gene37596.t1 MTR_5g079290 44.037 109 60 1 15 123 12 119 1.63e-29 113
MS.gene37596.t1 MTR_4g100720 42.982 114 64 1 14 127 7 119 1.82e-29 110
MS.gene37596.t1 MTR_5g079120 46.154 104 55 1 20 123 61 163 2.03e-29 114
MS.gene37596.t1 MTR_8g060940 47.000 100 52 1 20 119 7 105 4.69e-29 111
MS.gene37596.t1 MTR_7g017260 46.087 115 57 3 13 123 16 129 5.10e-29 112
MS.gene37596.t1 MTR_1g045610 45.946 111 58 2 14 123 14 123 5.26e-29 112
MS.gene37596.t1 MTR_0140s0030 45.370 108 57 2 20 126 13 119 9.83e-29 112
MS.gene37596.t1 MTR_0489s0020 45.370 108 57 2 20 126 13 119 9.83e-29 112
MS.gene37596.t1 MTR_3g039990 47.115 104 54 1 20 123 13 115 1.04e-28 112
MS.gene37596.t1 MTR_0247s0040 44.660 103 56 1 20 122 7 108 1.77e-28 108
MS.gene37596.t1 MTR_5g078930 46.465 99 52 1 21 119 10 107 1.98e-28 109
MS.gene37596.t1 MTR_5g078950 43.519 108 60 1 15 122 2 108 2.20e-28 110
MS.gene37596.t1 MTR_5g079220 45.192 104 56 1 20 123 21 123 2.66e-28 110
MS.gene37596.t1 MTR_6g012180 48.000 100 51 1 20 119 12 110 2.95e-28 111
MS.gene37596.t1 MTR_5g078860 46.154 104 55 1 20 123 7 109 6.91e-28 110
MS.gene37596.t1 MTR_4g063100 47.573 103 53 1 21 123 8 109 8.10e-28 108
MS.gene37596.t1 MTR_0001s0360 43.119 109 61 1 15 123 2 109 9.86e-28 108
MS.gene37596.t1 MTR_7g109320 55.000 100 44 1 20 119 12 110 1.98e-27 109
MS.gene37596.t1 MTR_2g096380 45.370 108 58 1 16 123 2 108 2.24e-27 107
MS.gene37596.t1 MTR_7g087130 46.296 108 56 2 20 126 12 118 2.31e-27 109
MS.gene37596.t1 MTR_0193s0090 42.308 104 59 1 20 123 7 109 3.61e-27 105
MS.gene37596.t1 MTR_5g078800 45.192 104 56 1 20 123 7 109 4.20e-27 107
MS.gene37596.t1 MTR_2g033170 46.667 105 55 1 19 123 23 126 8.01e-27 107
MS.gene37596.t1 MTR_0197s0010 44.000 100 55 1 24 123 5 103 1.15e-26 105
MS.gene37596.t1 MTR_4g123040 44.068 118 63 2 10 127 16 130 2.12e-26 106
MS.gene37596.t1 MTR_6g013135 42.308 156 49 3 105 259 148 263 5.82e-26 106
MS.gene37596.t1 MTR_3g463400 48.077 104 52 2 20 123 131 232 8.01e-26 106
MS.gene37596.t1 MTR_4g105660 44.828 116 60 3 20 133 178 291 8.20e-26 106
MS.gene37596.t1 MTR_7g035350 49.515 103 50 2 22 124 225 325 1.11e-25 106
MS.gene37596.t1 MTR_1g026870 46.903 113 57 3 16 127 79 189 1.23e-25 107
MS.gene37596.t1 MTR_1g026870 37.113 97 60 1 22 118 33 128 1.55e-14 74.3
MS.gene37596.t1 MTR_5g070020 48.077 104 52 2 20 123 120 221 1.49e-25 104
MS.gene37596.t1 MTR_4g019370 37.569 181 92 9 22 190 38 209 2.06e-25 104
MS.gene37596.t1 MTR_5g049190 48.039 102 51 2 22 123 19 118 2.76e-25 101
MS.gene37596.t1 MTR_7g451170 49.515 103 48 3 22 123 191 290 6.05e-25 103
MS.gene37596.t1 MTR_3g077650 44.737 114 59 3 22 133 181 292 6.31e-25 103
MS.gene37596.t1 MTR_5g016510 49.515 103 49 3 22 123 5 105 1.59e-24 101
MS.gene37596.t1 MTR_7g061330 37.908 153 85 4 16 160 107 257 1.92e-24 103
MS.gene37596.t1 MTR_7g061330 35.052 97 62 1 22 118 61 156 1.54e-13 71.2
MS.gene37596.t1 MTR_7g461410 37.908 153 85 4 16 160 107 257 1.92e-24 103
MS.gene37596.t1 MTR_7g461410 35.052 97 62 1 22 118 61 156 1.54e-13 71.2
MS.gene37596.t1 MTR_6g074860 41.441 111 63 2 22 132 4 112 2.18e-24 99.4
MS.gene37596.t1 MTR_7g061330 37.908 153 85 4 16 160 71 221 2.39e-24 103
MS.gene37596.t1 MTR_7g061330 35.052 97 62 1 22 118 25 120 1.87e-13 70.9
MS.gene37596.t1 MTR_6g027360 39.850 133 73 4 11 142 66 192 4.93e-24 99.8
MS.gene37596.t1 MTR_3g110028 45.133 113 59 3 16 127 79 189 5.04e-24 102
MS.gene37596.t1 MTR_3g110028 36.082 97 61 1 22 118 33 128 1.32e-14 74.7
MS.gene37596.t1 MTR_7g037260 45.872 109 55 3 15 123 140 244 6.07e-24 100
MS.gene37596.t1 MTR_6g027340 39.098 133 74 4 11 142 4 130 8.50e-24 96.7
MS.gene37596.t1 MTR_5g082910 45.299 117 61 3 3 119 1 114 1.26e-23 98.2
MS.gene37596.t1 MTR_4g094982 50.485 103 48 3 22 123 5 105 1.33e-23 97.8
MS.gene37596.t1 MTR_7g111290 61.194 67 25 1 52 118 2 67 1.43e-23 99.0
MS.gene37596.t1 MTR_7g450950 45.714 105 55 2 22 126 157 259 3.09e-23 97.8
MS.gene37596.t1 MTR_1g057980 45.714 105 55 2 20 124 78 180 3.20e-23 97.1
MS.gene37596.t1 MTR_5g010650 49.020 102 50 2 17 118 105 204 4.38e-23 99.0
MS.gene37596.t1 MTR_7g037130 45.045 111 57 3 15 125 140 246 6.95e-23 97.4
MS.gene37596.t1 MTR_3g101290 44.898 98 52 2 22 119 37 132 9.61e-23 94.4
MS.gene37596.t1 MTR_3g045430 38.793 116 69 2 17 131 10 124 1.05e-22 95.9
MS.gene37596.t1 MTR_4g088015 44.231 104 56 2 20 123 219 320 1.18e-22 97.4
MS.gene37596.t1 MTR_6g015455 47.423 97 49 2 22 118 5 99 1.55e-22 98.2
MS.gene37596.t1 MTR_5g007300 52.000 75 36 0 20 94 64 138 4.45e-22 90.1
MS.gene37596.t1 MTR_4g082040 40.541 111 64 2 22 132 105 213 5.08e-21 92.8
MS.gene37596.t1 MTR_0023s0210 50.000 70 35 0 20 89 7 76 5.61e-21 85.5
MS.gene37596.t1 MTR_6g055910 53.425 73 33 1 53 125 18 89 1.18e-20 89.4
MS.gene37596.t1 MTR_5g041570 42.857 105 55 3 22 123 134 236 1.38e-20 91.7
MS.gene37596.t1 MTR_3g089045 44.762 105 53 3 22 123 16 118 2.15e-20 89.4
MS.gene37596.t1 MTR_7g061550 40.708 113 64 2 16 126 1 112 2.23e-20 90.5
MS.gene37596.t1 MTR_4g063100 52.778 72 33 1 52 123 10 80 2.71e-20 87.8
MS.gene37596.t1 MTR_6g027370 41.284 109 62 2 22 130 99 205 2.24e-19 87.4
MS.gene37596.t1 MTR_2g096380 51.389 72 34 1 52 123 19 89 3.95e-19 84.3
MS.gene37596.t1 MTR_7g086960 40.541 111 64 2 22 132 89 197 3.45e-18 84.0
MS.gene37596.t1 MTR_5g038910 37.143 105 59 3 16 115 15 117 3.39e-14 73.2
MS.gene37596.t1 MTR_5g038910 37.143 105 59 3 16 115 15 117 4.94e-14 72.4
MS.gene37596.t1 MTR_8g468380 30.894 123 83 2 1 123 1 121 5.91e-14 72.0
MS.gene37596.t1 MTR_7g115550 37.778 90 53 3 20 109 5 91 9.00e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37596.t1 AT5G55020 58.400 125 48 2 12 136 21 141 3.68e-45 160
MS.gene37596.t1 AT4G26930 55.372 121 53 1 20 140 19 138 6.36e-45 157
MS.gene37596.t1 AT2G26960 49.342 152 72 2 10 157 10 160 2.22e-44 156
MS.gene37596.t1 AT2G32460 58.824 119 48 1 20 138 6 123 2.35e-44 157
MS.gene37596.t1 AT2G32460 58.824 119 48 1 20 138 18 135 2.35e-44 157
MS.gene37596.t1 AT3G11440 57.025 121 51 1 20 140 41 160 3.32e-43 154
MS.gene37596.t1 AT3G11440 57.025 121 51 1 20 140 41 160 1.38e-42 154
MS.gene37596.t1 AT3G11440 57.025 121 51 1 20 140 41 160 1.38e-42 154
MS.gene37596.t1 AT3G11440 57.025 121 51 1 20 140 41 160 1.38e-42 154
MS.gene37596.t1 AT5G06100 54.688 128 56 2 20 147 32 157 2.32e-42 151
MS.gene37596.t1 AT5G06100 57.265 117 49 1 20 136 32 147 6.57e-42 151
MS.gene37596.t1 AT5G06100 57.265 117 49 1 20 136 32 147 6.57e-42 151
MS.gene37596.t1 AT5G06100 57.265 117 49 1 20 136 32 147 6.57e-42 151
MS.gene37596.t1 AT5G06100 57.265 117 49 1 20 136 32 147 6.57e-42 151
MS.gene37596.t1 AT2G26950 35.985 264 139 7 7 270 3 236 3.71e-41 147
MS.gene37596.t1 AT5G26660 55.263 114 49 2 19 131 11 123 5.79e-39 140
MS.gene37596.t1 AT4G21440 50.000 136 62 3 20 154 12 142 6.50e-39 140
MS.gene37596.t1 AT4G01680 55.263 114 49 2 19 131 11 123 7.39e-39 137
MS.gene37596.t1 AT4G01680 55.263 114 49 2 19 131 11 123 3.37e-38 138
MS.gene37596.t1 AT1G57560 46.104 154 76 4 19 166 11 163 5.84e-38 137
MS.gene37596.t1 AT5G14750 51.754 114 54 1 10 123 6 118 6.11e-37 131
MS.gene37596.t1 AT5G10280 55.752 113 48 2 20 131 12 123 7.67e-37 134
MS.gene37596.t1 AT3G61250 53.982 113 50 2 20 131 12 123 8.46e-37 133
MS.gene37596.t1 AT1G22640 52.212 113 52 2 20 131 12 123 1.44e-36 131
MS.gene37596.t1 AT1G57560 52.632 114 52 2 19 131 11 123 1.88e-36 132
MS.gene37596.t1 AT5G16770 52.212 113 52 2 20 131 12 123 2.73e-36 132
MS.gene37596.t1 AT5G16770 52.212 113 52 2 20 131 12 123 2.73e-36 132
MS.gene37596.t1 AT1G74080 37.379 206 114 5 20 223 12 204 3.16e-36 132
MS.gene37596.t1 AT5G16770 52.212 113 52 2 20 131 12 123 4.64e-36 132
MS.gene37596.t1 AT5G16770 52.212 113 52 2 20 131 12 123 4.64e-36 132
MS.gene37596.t1 AT5G54230 53.097 113 51 2 20 131 12 123 8.99e-36 131
MS.gene37596.t1 AT1G09540 51.754 114 53 2 19 131 11 123 1.08e-35 132
MS.gene37596.t1 AT3G27920 48.760 121 58 2 17 137 11 127 1.38e-35 128
MS.gene37596.t1 AT4G38620 54.054 111 49 2 22 131 14 123 1.55e-35 129
MS.gene37596.t1 AT5G40330 41.875 160 88 4 19 177 11 166 1.87e-35 127
MS.gene37596.t1 AT5G61420 41.818 165 91 3 20 180 12 175 1.88e-35 131
MS.gene37596.t1 AT3G12720 50.877 114 54 2 19 131 21 133 1.96e-35 130
MS.gene37596.t1 AT4G17785 47.692 130 62 3 15 143 8 132 2.09e-35 131
MS.gene37596.t1 AT4G34990 52.174 115 53 2 18 131 10 123 2.15e-35 129
MS.gene37596.t1 AT4G17785 47.692 130 62 3 15 143 8 132 2.20e-35 130
MS.gene37596.t1 AT4G05100 53.097 113 51 2 20 131 13 124 2.28e-35 130
MS.gene37596.t1 AT4G28110 53.097 113 51 2 20 131 12 123 2.91e-35 129
MS.gene37596.t1 AT5G65230 50.820 122 58 2 20 140 12 132 3.15e-35 129
MS.gene37596.t1 AT1G18570 51.327 113 53 2 20 131 13 124 3.32e-35 130
MS.gene37596.t1 AT4G09460 52.252 111 51 2 22 131 14 123 3.83e-35 127
MS.gene37596.t1 AT3G01530 42.361 144 76 3 20 160 25 164 5.48e-35 126
MS.gene37596.t1 AT3G02940 51.327 113 53 2 20 131 12 123 6.69e-35 129
MS.gene37596.t1 AT1G34670 53.097 113 51 2 20 131 12 123 7.90e-35 130
MS.gene37596.t1 AT4G01680 50.000 126 49 3 19 131 11 135 8.08e-35 129
MS.gene37596.t1 AT3G02940 51.327 113 53 2 20 131 12 123 1.17e-34 128
MS.gene37596.t1 AT3G02940 51.327 113 53 2 20 131 12 123 1.17e-34 128
MS.gene37596.t1 AT5G15310 46.094 128 67 2 20 146 12 138 1.42e-34 126
MS.gene37596.t1 AT5G35550 47.934 121 62 1 18 138 12 131 2.87e-34 125
MS.gene37596.t1 AT1G35515 50.442 113 54 2 20 131 12 123 2.96e-34 124
MS.gene37596.t1 AT3G01140 41.844 141 80 2 20 159 12 151 3.48e-34 127
MS.gene37596.t1 AT3G01140 41.844 141 80 2 20 159 55 194 3.73e-34 128
MS.gene37596.t1 AT5G15310 46.094 128 67 2 20 146 12 138 3.75e-34 127
MS.gene37596.t1 AT1G18710 45.161 124 64 3 18 138 10 132 4.03e-34 125
MS.gene37596.t1 AT5G15310 46.094 128 67 2 20 146 12 138 4.10e-34 127
MS.gene37596.t1 AT1G63910 48.760 121 58 2 19 136 11 130 4.49e-34 128
MS.gene37596.t1 AT2G16720 49.565 115 56 2 18 131 10 123 4.55e-34 125
MS.gene37596.t1 AT5G60890 35.407 209 123 6 20 223 12 213 9.99e-34 125
MS.gene37596.t1 AT1G79180 49.153 118 57 2 20 135 14 130 1.02e-33 125
MS.gene37596.t1 AT5G57620 55.238 105 45 2 20 123 12 115 1.08e-33 126
MS.gene37596.t1 AT5G56110 48.696 115 57 2 18 131 10 123 1.08e-33 125
MS.gene37596.t1 AT3G13890 50.476 105 51 1 19 123 11 114 1.28e-33 126
MS.gene37596.t1 AT1G16490 53.846 104 47 1 20 123 14 116 1.61e-33 124
MS.gene37596.t1 AT3G08500 53.571 112 50 2 13 123 22 132 2.68e-33 125
MS.gene37596.t1 AT5G07690 54.286 105 47 1 20 124 12 115 2.95e-33 125
MS.gene37596.t1 AT5G12870 52.381 105 49 1 19 123 17 120 4.00e-33 123
MS.gene37596.t1 AT3G23250 50.467 107 51 2 20 125 12 117 4.29e-33 123
MS.gene37596.t1 AT3G27810 50.476 105 51 1 19 123 19 122 5.23e-33 121
MS.gene37596.t1 AT4G37780 51.429 105 49 2 20 123 12 115 5.76e-33 123
MS.gene37596.t1 AT3G13540 46.903 113 58 2 20 131 23 134 5.93e-33 122
MS.gene37596.t1 AT5G40350 49.524 105 52 1 19 123 16 119 7.25e-33 120
MS.gene37596.t1 AT5G07700 51.327 113 53 2 20 131 12 123 7.40e-33 124
MS.gene37596.t1 AT5G07700 51.327 113 53 2 20 131 12 123 7.40e-33 124
MS.gene37596.t1 AT1G74430 45.217 115 61 2 18 131 10 123 1.07e-32 122
MS.gene37596.t1 AT3G49690 55.238 105 45 2 20 123 12 115 1.13e-32 122
MS.gene37596.t1 AT3G28470 54.000 100 45 1 20 119 12 110 2.27e-32 122
MS.gene37596.t1 AT3G60460 50.909 110 52 2 18 126 9 117 2.61e-32 121
MS.gene37596.t1 AT2G31180 50.000 104 51 1 20 123 12 114 4.29e-32 119
MS.gene37596.t1 AT5G16600 51.754 114 53 2 20 132 12 124 5.20e-32 121
MS.gene37596.t1 AT1G06180 50.926 108 52 1 20 127 12 118 6.21e-32 119
MS.gene37596.t1 AT5G23000 51.887 106 49 2 19 123 11 115 1.13e-31 120
MS.gene37596.t1 AT1G66230 50.877 114 54 2 20 132 12 124 1.34e-31 119
MS.gene37596.t1 AT4G22680 51.327 113 53 2 20 131 12 123 2.12e-31 118
MS.gene37596.t1 AT1G68320 45.946 111 59 1 17 127 16 125 2.21e-31 119
MS.gene37596.t1 AT3G12820 50.476 105 51 1 19 123 13 116 2.44e-31 117
MS.gene37596.t1 AT5G49330 52.000 100 47 1 20 119 12 110 2.53e-31 120
MS.gene37596.t1 AT1G25340 43.200 125 70 1 3 127 1 124 3.46e-31 118
MS.gene37596.t1 AT5G65790 53.333 105 47 2 20 123 12 115 3.73e-31 120
MS.gene37596.t1 AT2G47460 50.943 106 50 2 20 124 12 116 8.33e-31 119
MS.gene37596.t1 AT1G56160 50.000 106 52 1 18 123 12 116 1.11e-30 117
MS.gene37596.t1 AT3G13890 46.491 114 51 2 19 123 11 123 1.15e-30 119
MS.gene37596.t1 AT5G52600 50.000 100 49 1 20 119 12 110 1.72e-30 114
MS.gene37596.t1 AT5G14340 39.456 147 83 4 20 161 24 169 1.74e-30 116
MS.gene37596.t1 AT2G47190 44.144 111 61 1 17 127 17 126 2.07e-30 115
MS.gene37596.t1 AT3G48920 47.414 116 60 1 8 123 6 120 2.82e-30 115
MS.gene37596.t1 AT1G48000 45.714 105 56 1 19 123 31 134 3.62e-30 114
MS.gene37596.t1 AT5G62320 49.167 120 52 3 20 131 13 131 4.62e-30 114
MS.gene37596.t1 AT3G62610 47.826 115 56 3 20 133 12 123 5.17e-30 116
MS.gene37596.t1 AT4G12350 49.558 113 55 2 20 131 12 123 1.08e-29 114
MS.gene37596.t1 AT4G13480 50.485 103 50 1 21 123 7 108 1.34e-29 113
MS.gene37596.t1 AT2G36890 46.087 115 60 2 20 133 12 125 1.69e-29 114
MS.gene37596.t1 AT3G47600 46.296 108 56 2 20 126 12 118 2.74e-29 114
MS.gene37596.t1 AT2G36890 46.087 115 60 2 20 133 53 166 2.80e-29 114
MS.gene37596.t1 AT5G62470 46.296 108 56 2 20 126 12 118 4.06e-29 114
MS.gene37596.t1 AT3G24310 48.544 103 52 1 21 123 19 120 7.06e-29 112
MS.gene37596.t1 AT1G74650 46.667 105 55 1 19 123 11 114 9.32e-29 112
MS.gene37596.t1 AT5G59780 42.500 120 68 1 16 135 4 122 1.08e-28 110
MS.gene37596.t1 AT3G28910 47.115 104 54 1 20 123 12 114 2.80e-28 111
MS.gene37596.t1 AT3G30210 46.226 106 56 1 21 126 28 132 3.61e-28 110
MS.gene37596.t1 AT3G53200 47.170 106 55 1 18 123 7 111 6.40e-28 108
MS.gene37596.t1 AT3G46130 44.348 115 63 1 21 135 10 123 6.84e-28 108
MS.gene37596.t1 AT1G08810 46.296 108 56 2 20 126 12 118 1.49e-27 108
MS.gene37596.t1 AT5G26660 56.471 85 35 2 48 131 9 92 1.79e-27 109
MS.gene37596.t1 AT1G79180 38.158 152 58 3 19 135 13 163 3.34e-27 108
MS.gene37596.t1 AT5G62470 46.296 108 55 3 20 126 12 117 3.67e-27 108
MS.gene37596.t1 AT4G18770 42.336 137 75 3 20 154 215 349 4.71e-27 109
MS.gene37596.t1 AT4G25560 46.602 103 54 1 21 123 11 112 6.30e-27 107
MS.gene37596.t1 AT1G66370 46.000 100 53 1 20 119 8 106 8.20e-27 105
MS.gene37596.t1 AT1G25340 40.000 125 69 2 3 127 1 119 5.82e-26 104
MS.gene37596.t1 AT1G25340 40.000 125 69 2 3 127 1 119 8.68e-26 104
MS.gene37596.t1 AT3G06490 44.167 120 64 2 6 123 3 121 1.54e-25 103
MS.gene37596.t1 AT5G40360 40.458 131 69 3 1 124 130 258 2.41e-25 104
MS.gene37596.t1 AT5G52260 47.573 103 53 1 21 123 13 114 5.97e-25 101
MS.gene37596.t1 AT1G56650 38.931 131 68 3 20 139 8 137 6.10e-25 100
MS.gene37596.t1 AT1G66380 46.000 100 53 1 20 119 8 106 6.42e-25 97.8
MS.gene37596.t1 AT4G37260 47.826 115 57 3 17 130 8 120 8.71e-25 102
MS.gene37596.t1 AT1G17950 39.200 125 74 2 22 146 5 127 1.22e-24 100
MS.gene37596.t1 AT5G67300 49.541 109 51 4 16 123 1 106 1.61e-24 100
MS.gene37596.t1 AT5G17800 36.306 157 80 5 3 142 61 214 2.93e-24 100
MS.gene37596.t1 AT3G50060 49.541 109 51 4 16 123 1 106 3.54e-24 100
MS.gene37596.t1 AT5G49620 43.810 105 58 1 19 123 25 128 5.45e-24 99.8
MS.gene37596.t1 AT5G11510 34.320 169 93 5 16 168 75 241 6.50e-24 102
MS.gene37596.t1 AT5G11510 35.052 97 62 1 22 118 29 124 2.54e-14 73.9
MS.gene37596.t1 AT5G11510 34.320 169 93 5 16 168 75 241 6.50e-24 102
MS.gene37596.t1 AT5G11510 35.052 97 62 1 22 118 29 124 2.54e-14 73.9
MS.gene37596.t1 AT5G11510 34.320 169 93 5 16 168 75 241 6.50e-24 102
MS.gene37596.t1 AT5G11510 35.052 97 62 1 22 118 29 124 2.54e-14 73.9
MS.gene37596.t1 AT5G11510 34.320 169 93 5 16 168 75 241 6.56e-24 102
MS.gene37596.t1 AT5G11510 35.052 97 62 1 22 118 29 124 2.49e-14 73.9
MS.gene37596.t1 AT5G11510 34.320 169 93 5 16 168 75 241 6.65e-24 102
MS.gene37596.t1 AT5G11510 35.052 97 62 1 22 118 29 124 2.40e-14 73.9
MS.gene37596.t1 AT5G11050 46.078 102 53 2 22 123 105 204 1.31e-23 100
MS.gene37596.t1 AT5G58850 46.154 104 54 2 20 123 103 204 1.34e-23 100
MS.gene37596.t1 AT1G66390 44.231 104 57 1 20 123 8 110 1.34e-23 97.4
MS.gene37596.t1 AT3G27785 38.849 139 69 4 20 157 187 310 1.95e-23 99.8
MS.gene37596.t1 AT4G32730 45.133 113 59 3 16 127 81 191 3.35e-23 100
MS.gene37596.t1 AT4G32730 37.113 97 60 1 22 118 35 130 5.80e-15 75.9
MS.gene37596.t1 AT4G32730 45.133 113 59 3 16 127 81 191 3.35e-23 100
MS.gene37596.t1 AT4G32730 37.113 97 60 1 22 118 35 130 5.80e-15 75.9
MS.gene37596.t1 AT4G32730 45.133 113 59 3 16 127 81 191 3.35e-23 100
MS.gene37596.t1 AT4G32730 37.113 97 60 1 22 118 35 130 5.80e-15 75.9
MS.gene37596.t1 AT4G32730 45.133 113 59 3 16 127 81 191 3.35e-23 100
MS.gene37596.t1 AT4G32730 37.113 97 60 1 22 118 35 130 5.80e-15 75.9
MS.gene37596.t1 AT4G32730 45.133 113 59 3 16 127 81 191 3.52e-23 100
MS.gene37596.t1 AT4G32730 37.113 97 60 1 22 118 35 130 5.85e-15 75.9
MS.gene37596.t1 AT5G02320 45.045 111 58 3 16 125 121 229 8.83e-23 98.6
MS.gene37596.t1 AT5G02320 37.113 97 60 1 22 118 75 170 4.21e-14 72.8
MS.gene37596.t1 AT5G02320 45.045 111 58 3 16 125 121 229 8.83e-23 98.6
MS.gene37596.t1 AT5G02320 37.113 97 60 1 22 118 75 170 4.21e-14 72.8
MS.gene37596.t1 AT5G02320 45.045 111 58 3 16 125 61 169 1.17e-22 97.8
MS.gene37596.t1 AT5G02320 37.113 97 60 1 22 118 15 110 5.00e-14 72.8
MS.gene37596.t1 AT3G09230 45.098 102 54 2 22 123 55 154 1.76e-22 96.7
MS.gene37596.t1 AT3G09370 40.132 152 79 6 16 163 129 272 2.43e-22 97.1
MS.gene37596.t1 AT3G09370 37.113 97 60 1 22 118 83 178 1.29e-14 74.3
MS.gene37596.t1 AT3G09370 40.132 152 79 6 16 163 124 267 2.62e-22 97.1
MS.gene37596.t1 AT3G09370 37.113 97 60 1 22 118 78 173 1.29e-14 74.3
MS.gene37596.t1 AT3G55730 47.573 103 50 3 22 123 56 155 2.63e-22 96.3
MS.gene37596.t1 AT4G33450 40.000 110 64 2 21 130 18 125 3.44e-22 93.6
MS.gene37596.t1 AT3G09370 40.132 152 79 6 16 163 137 280 3.72e-22 96.7
MS.gene37596.t1 AT3G09370 37.113 97 60 1 22 118 91 186 1.60e-14 74.3
MS.gene37596.t1 AT2G39880 47.826 115 53 4 10 123 41 149 3.83e-22 95.5
MS.gene37596.t1 AT5G49620 38.983 118 59 1 19 123 25 142 4.05e-22 94.7
MS.gene37596.t1 AT5G35550 47.826 92 47 1 47 138 44 134 4.44e-22 93.6
MS.gene37596.t1 AT2G23290 47.573 103 51 3 22 123 13 113 5.20e-22 94.4
MS.gene37596.t1 AT3G53200 56.164 73 31 1 51 123 7 78 1.18e-21 90.9
MS.gene37596.t1 AT1G26780 39.823 113 66 2 20 132 96 206 3.67e-21 91.3
MS.gene37596.t1 AT3G27810 53.521 71 32 1 53 123 4 73 3.92e-21 89.0
MS.gene37596.t1 AT1G26780 39.823 113 66 2 20 132 96 206 4.88e-21 92.4
MS.gene37596.t1 AT1G69560 38.938 113 67 2 20 132 105 215 5.11e-21 91.7
MS.gene37596.t1 AT1G69560 38.938 113 67 2 20 132 121 231 5.70e-21 92.0
MS.gene37596.t1 AT5G40350 52.113 71 33 1 53 123 5 74 9.38e-21 87.4
MS.gene37596.t1 AT5G14750 52.941 68 31 1 56 123 18 84 2.05e-20 86.7
MS.gene37596.t1 AT1G73410 42.727 110 61 2 22 131 6 113 2.69e-20 88.2
MS.gene37596.t1 AT3G12820 55.882 68 29 1 56 123 2 68 2.93e-20 87.0
MS.gene37596.t1 AT3G29020 32.044 181 110 4 22 202 65 232 2.96e-20 87.8
MS.gene37596.t1 AT1G73410 45.918 98 51 2 22 119 6 101 4.39e-20 86.7
MS.gene37596.t1 AT3G46130 47.619 84 43 1 52 135 9 91 4.67e-20 87.0
MS.gene37596.t1 AT3G29020 40.541 111 64 2 22 132 67 175 5.66e-20 88.6
MS.gene37596.t1 AT5G59780 47.059 85 44 1 51 135 18 101 6.43e-20 86.7
MS.gene37596.t1 AT3G46130 47.059 85 44 1 51 135 18 101 7.59e-20 86.7
MS.gene37596.t1 AT2G25230 41.121 107 61 2 19 125 23 127 1.01e-19 86.3
MS.gene37596.t1 AT2G37630 40.367 109 62 2 21 127 3 110 1.02e-19 88.6
MS.gene37596.t1 AT4G00540 41.739 115 61 4 16 126 97 209 4.07e-19 87.4
MS.gene37596.t1 AT4G00540 41.739 115 61 4 16 126 95 207 5.81e-19 87.0
MS.gene37596.t1 AT3G47600 49.333 75 36 2 53 126 39 112 2.71e-18 84.0
MS.gene37596.t1 AT1G66380 49.206 63 32 0 20 82 8 70 1.36e-17 77.4
MS.gene37596.t1 AT5G39700 38.462 104 62 2 23 126 57 158 3.62e-16 75.5
MS.gene37596.t1 AT5G40430 30.180 222 112 11 19 237 51 232 9.94e-16 75.9
MS.gene37596.t1 AT1G14350 36.538 104 64 2 24 127 27 128 3.59e-15 75.9
MS.gene37596.t1 AT1G14350 36.538 104 64 2 24 127 27 128 3.59e-15 75.9
MS.gene37596.t1 AT1G22640 53.030 66 29 2 67 131 2 66 3.78e-15 73.2
MS.gene37596.t1 AT2G02820 35.577 104 65 2 24 127 32 133 1.40e-14 74.3
MS.gene37596.t1 AT2G02820 35.577 104 65 2 24 127 32 133 1.45e-14 73.9
MS.gene37596.t1 AT1G66380 48.529 68 34 1 52 119 7 73 2.97e-14 68.2
MS.gene37596.t1 AT2G02820 36.538 104 64 2 24 127 32 133 4.18e-14 72.0
MS.gene37596.t1 AT3G18100 40.206 97 56 2 21 117 497 591 5.95e-13 69.7
MS.gene37596.t1 AT3G18100 40.206 97 56 2 21 117 545 639 6.11e-13 69.7
MS.gene37596.t1 AT3G18100 40.206 97 56 2 21 117 384 478 6.89e-13 69.3
MS.gene37596.t1 AT3G18100 40.206 97 56 2 21 117 332 426 8.53e-13 68.9
MS.gene37596.t1 AT5G14750 47.368 57 29 1 67 123 2 57 4.07e-12 63.2
MS.gene37596.t1 AT5G14750 47.368 57 29 1 67 123 2 57 4.07e-12 63.2
MS.gene37596.t1 AT3G23250 46.774 62 31 2 67 127 2 62 8.14e-12 64.3
MS.gene37596.t1 AT1G71030 34.409 93 58 3 47 138 8 98 3.49e-11 62.0
MS.gene37596.t1 AT1G71030 35.802 81 50 2 59 138 5 84 5.39e-11 60.8

Find 48 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAAGTTGAGGTGAAATT+TGG 0.218114 5.3:+71354649 MS.gene37596:CDS
CAAAATATGGAGTCGGAAAT+TGG 0.252221 5.3:+71352860 MS.gene37596:CDS
GAAGCATATGTGACAAAATA+TGG 0.254177 5.3:+71352847 MS.gene37596:CDS
GAAGTTGATAGTTCGTATTT+TGG 0.272514 5.3:-71355157 None:intergenic
AACCCTACAGTGACGGATTC+CGG 0.343128 5.3:+71357140 MS.gene37596:CDS
ATGGCATTATCTGTTCTTCC+AGG 0.344181 5.3:-71354499 None:intergenic
CAAATTTCACCTCAACTTGT+TGG 0.350613 5.3:-71354648 None:intergenic
ATTCGATTATACGATAAGTT+TGG 0.354757 5.3:+71353006 MS.gene37596:CDS
TTTATCTCATCACAAATTGA+TGG 0.368195 5.3:-71354697 None:intergenic
TATTAGTATGTCTTTGTCTT+CGG 0.401663 5.3:+71352741 None:intergenic
CTCACCTGTCAATCAAAGTT+GGG 0.403127 5.3:-71354846 None:intergenic
AATGTGGGAAGTACTTCAAT+AGG 0.420224 5.3:+71354811 MS.gene37596:CDS
CGGTCAATGTCCACGGGATA+CGG 0.439758 5.3:+71357112 MS.gene37596:CDS
TTGACCGACGGCTGAACGAC+TGG 0.442129 5.3:-71357096 None:intergenic
CGACCCCAACTTTGATTGAC+AGG 0.446732 5.3:+71354842 MS.gene37596:CDS
ATTCATATCACCACCGTCAT+TGG 0.461587 5.3:-71352776 None:intergenic
CTTCCTTCATATACGATGTC+TGG 0.462969 5.3:+71355176 MS.gene37596:CDS
ATGTATGAACATGGTGGGAG+TGG 0.476310 5.3:-71355134 None:intergenic
ACTCACCTGTCAATCAAAGT+TGG 0.481270 5.3:-71354847 None:intergenic
GATGATAAGTTGAATGGTAA+TGG 0.486642 5.3:+71354598 MS.gene37596:CDS
AAACATGATGATAAGTTGAA+TGG 0.487343 5.3:+71354592 MS.gene37596:CDS
CAGCCGTCGGTCAATGTCCA+CGG 0.504700 5.3:+71357105 MS.gene37596:CDS
CGATTATACGATAAGTTTGG+AGG 0.518687 5.3:+71353009 MS.gene37596:CDS
GTTGCCAGTCGTTCAGCCGT+CGG 0.519372 5.3:+71357092 MS.gene37596:CDS
AATGGAGAAGGTAGTTTGAG+TGG 0.529566 5.3:+71354616 MS.gene37596:CDS
AAATATGCTATACAATAATG+TGG 0.534435 5.3:+71354795 MS.gene37596:CDS
ACTTGATTTGTAGTGACAGC+CGG 0.537510 5.3:-71357159 None:intergenic
CAGCCGGAATCCGTCACTGT+AGG 0.557570 5.3:-71357143 None:intergenic
AGCCGGAATCCGTCACTGTA+GGG 0.564622 5.3:-71357142 None:intergenic
TCACCAGACATCGTATATGA+AGG 0.571643 5.3:-71355179 None:intergenic
TTCTAGCAGCCAACAAGTTG+AGG 0.572587 5.3:+71354639 MS.gene37596:CDS
AGATGTGATACCATAGCCAT+AGG 0.586469 5.3:-71355107 None:intergenic
ATAAGTTTGGAGGACCCAAA+TGG 0.588703 5.3:+71353019 MS.gene37596:CDS
AGCCGTCGGTCAATGTCCAC+GGG 0.588721 5.3:+71357106 MS.gene37596:CDS
AAGTTGAATGGTAATGGAGA+AGG 0.590521 5.3:+71354604 MS.gene37596:CDS
TATGAACATGGTGGGAGTGG+AGG 0.597613 5.3:-71355131 None:intergenic
AGGAACATGGTCAAAAGATG+AGG 0.600705 5.3:+71352813 MS.gene37596:CDS
ATAGCCATAGGTATACGAAA+AGG 0.602609 5.3:-71355095 None:intergenic
AAGGCAGGGCTTAAACGTTG+TGG 0.603457 5.3:+71352898 MS.gene37596:CDS
AATATGCTATACAATAATGT+GGG 0.606173 5.3:+71354796 MS.gene37596:CDS
GGGTTAATTTCCGTATCCCG+TGG 0.608436 5.3:-71357122 None:intergenic
TATGTGACAAAATATGGAGT+CGG 0.609591 5.3:+71352853 MS.gene37596:CDS
GGAAATTAACCCTACAGTGA+CGG 0.630552 5.3:+71357133 MS.gene37596:CDS
ATCCCGTGGACATTGACCGA+CGG 0.639777 5.3:-71357108 None:intergenic
TCACCTGTCAATCAAAGTTG+GGG 0.646828 5.3:-71354845 None:intergenic
AAAAGAAAACTTGAAAGACA+TGG 0.648245 5.3:+71354544 MS.gene37596:CDS
TTTGGATGTATGAACATGGT+GGG 0.654519 5.3:-71355139 None:intergenic
ATGGTCTAAAATGACTACCC+AGG 0.661434 5.3:+71353038 MS.gene37596:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTCAAATTTAAAAGAAA+GGG - chr5.3:71353873-71353892 None:intergenic 10.0%
!! GTTTAAGAAATTTATAATTA+TGG - chr5.3:71353356-71353375 None:intergenic 10.0%
!!! AAAATCATATTATTTTTTGT+TGG - chr5.3:71354038-71354057 None:intergenic 10.0%
!!! AATGTTTTTTTTTTTTTTTG+AGG - chr5.3:71356135-71356154 None:intergenic 10.0%
!!! AATTGTTTTTTTTTAAAACT+CGG + chr5.3:71355780-71355799 MS.gene37596:intron 10.0%
!!! ATGTTTTTTTTTTTTTTTGA+GGG - chr5.3:71356134-71356153 None:intergenic 10.0%
!!! ATTGATTAAACTAATTTTAA+TGG + chr5.3:71356859-71356878 MS.gene37596:intron 10.0%
!! ATAAAGTTTAAATCTGATAT+GGG + chr5.3:71354960-71354979 MS.gene37596:intron 15.0%
!! ATATTAAGAACGATAAAATA+TGG - chr5.3:71353616-71353635 None:intergenic 15.0%
!! ATGTGAATTATTATTGTTAT+TGG + chr5.3:71355751-71355770 MS.gene37596:intron 15.0%
!! CAATTTCAAATTTAAAAGAA+AGG - chr5.3:71353874-71353893 None:intergenic 15.0%
!! TGGATCAATATTTAATATTT+GGG - chr5.3:71354018-71354037 None:intergenic 15.0%
!! TTGGATCAATATTTAATATT+TGG - chr5.3:71354019-71354038 None:intergenic 15.0%
!!! AAAATTATATTTTTTCGACT+TGG + chr5.3:71353303-71353322 MS.gene37596:intron 15.0%
!!! AAATTATATTTTTTCGACTT+GGG + chr5.3:71353304-71353323 MS.gene37596:intron 15.0%
!!! AAATTTGGAAAAGATTTTTT+GGG + chr5.3:71354664-71354683 MS.gene37596:CDS 15.0%
!!! ATAAATCTAGTTGATAAAAA+AGG + chr5.3:71355347-71355366 MS.gene37596:intron 15.0%
!!! ATATTTTTTTTGACAAGTAT+AGG + chr5.3:71353770-71353789 MS.gene37596:intron 15.0%
!!! ATTAGTTTAATCAATATCAT+TGG - chr5.3:71356854-71356873 None:intergenic 15.0%
!!! ATTTTGTATTTGTTTTCTTT+GGG + chr5.3:71354469-71354488 MS.gene37596:intron 15.0%
!!! ATTTTTTCATGATTTTCTAA+TGG - chr5.3:71353640-71353659 None:intergenic 15.0%
!!! GATTTGTTTTATATGTTTTT+TGG + chr5.3:71355652-71355671 MS.gene37596:intron 15.0%
!!! GTTGTTTTTTTTTTTTTGAT+AGG - chr5.3:71356102-71356121 None:intergenic 15.0%
!!! TAAATCTAGTTGATAAAAAA+GGG + chr5.3:71355348-71355367 MS.gene37596:intron 15.0%
!!! TATTTTGTATTTGTTTTCTT+TGG + chr5.3:71354468-71354487 MS.gene37596:intron 15.0%
!! AAAAGAGGAAAAAACAAAAA+AGG - chr5.3:71355625-71355644 None:intergenic 20.0%
!! AAATATGCTATACAATAATG+TGG + chr5.3:71354795-71354814 MS.gene37596:CDS 20.0%
!! AATAATGTGCTAAACAAAAT+TGG + chr5.3:71356508-71356527 MS.gene37596:intron 20.0%
!! AATATGCTATACAATAATGT+GGG + chr5.3:71354796-71354815 MS.gene37596:CDS 20.0%
!! ACTAATCTAAATAACCAATA+TGG - chr5.3:71354432-71354451 None:intergenic 20.0%
!! ATAATGTGCTAAACAAAATT+GGG + chr5.3:71356509-71356528 MS.gene37596:intron 20.0%
!! GATAAAGTTTAAATCTGATA+TGG + chr5.3:71354959-71354978 MS.gene37596:intron 20.0%
!! TAATGAAAATAACAATAGCT+TGG + chr5.3:71355460-71355479 MS.gene37596:intron 20.0%
!! TAGATTTCACATATATTACA+TGG + chr5.3:71353830-71353849 MS.gene37596:intron 20.0%
!! TTCATTTCTCACTTAATTTA+TGG - chr5.3:71356640-71356659 None:intergenic 20.0%
!! TTTGAATCATCAGAAAAATT+TGG - chr5.3:71354778-71354797 None:intergenic 20.0%
!!! AAGTGATTGTAAGTTTTTTT+AGG + chr5.3:71356532-71356551 MS.gene37596:intron 20.0%
!!! ATAATGCCATAAAAAACTTT+TGG + chr5.3:71354512-71354531 MS.gene37596:CDS 20.0%
!!! ATCTTTTTTTTTTTCAGTTG+TGG - chr5.3:71354346-71354365 None:intergenic 20.0%
!!! ATTATATATTTTTTCAGCAG+TGG + chr5.3:71356332-71356351 MS.gene37596:intron 20.0%
!!! ATTCTATCATGATTTTTTCA+AGG + chr5.3:71353247-71353266 MS.gene37596:intron 20.0%
!!! CAATCTCTAAATTGATTTTT+TGG + chr5.3:71353661-71353680 MS.gene37596:intron 20.0%
!!! GAAATTTGGAAAAGATTTTT+TGG + chr5.3:71354663-71354682 MS.gene37596:CDS 20.0%
! AAAAGAAAACTTGAAAGACA+TGG + chr5.3:71354544-71354563 MS.gene37596:CDS 25.0%
! AAAATGTGTTCAATACAATC+TGG - chr5.3:71356053-71356072 None:intergenic 25.0%
! AACAAATCAAATCTCAAAAG+AGG - chr5.3:71355640-71355659 None:intergenic 25.0%
! AGAACAAAATGAGACAATAT+TGG + chr5.3:71355973-71355992 MS.gene37596:intron 25.0%
! ATTCGATTATACGATAAGTT+TGG + chr5.3:71353006-71353025 MS.gene37596:CDS 25.0%
! ATTGTGAAGAAGAAAAAAGT+TGG - chr5.3:71355719-71355738 None:intergenic 25.0%
! CTACAACCAGATTTAAAAAA+GGG + chr5.3:71352952-71352971 MS.gene37596:CDS 25.0%
! TAATAAGGATCTCGAATTAT+AGG + chr5.3:71353741-71353760 MS.gene37596:intron 25.0%
! TCTCAGAGTCATAAATAATA+AGG + chr5.3:71353696-71353715 MS.gene37596:intron 25.0%
! TTCAATCATTTCCTTACTTA+GGG - chr5.3:71356177-71356196 None:intergenic 25.0%
! TTGGAATGCAATATCAAAAA+AGG + chr5.3:71352879-71352898 MS.gene37596:CDS 25.0%
! TTGTTTAGCACATTATTGAT+AGG - chr5.3:71356505-71356524 None:intergenic 25.0%
! TTTATCTCATCACAAATTGA+TGG - chr5.3:71354700-71354719 None:intergenic 25.0%
! TTTCAATCATTTCCTTACTT+AGG - chr5.3:71356178-71356197 None:intergenic 25.0%
!! AAACATGATGATAAGTTGAA+TGG + chr5.3:71354592-71354611 MS.gene37596:CDS 25.0%
!! AATCTTTGGTGTATAGAAAA+TGG - chr5.3:71355288-71355307 None:intergenic 25.0%
!! AGTTTGACTTTATAACTTCA+AGG + chr5.3:71354936-71354955 MS.gene37596:intron 25.0%
!! ATGAATGATGAGTTGAAAAA+AGG + chr5.3:71352793-71352812 MS.gene37596:CDS 25.0%
!! CCATGAATTTTATAGAGTTT+GGG + chr5.3:71356360-71356379 MS.gene37596:intron 25.0%
!! GGTCTTTAATGTTTTCAAAA+TGG + chr5.3:71356978-71356997 MS.gene37596:intron 25.0%
!! GTTTGACTTTATAACTTCAA+GGG + chr5.3:71354937-71354956 MS.gene37596:intron 25.0%
!! TTATCATCATGTTTTATGCT+AGG - chr5.3:71354586-71354605 None:intergenic 25.0%
!! TTTTCTTCTTCTTCACTAAA+TGG - chr5.3:71352979-71352998 None:intergenic 25.0%
!!! AAATTTGGAAGCTGATTTTT+CGG - chr5.3:71354763-71354782 None:intergenic 25.0%
!!! CAATTCTAAGACCATAATTT+CGG - chr5.3:71355898-71355917 None:intergenic 25.0%
!!! TGCATTCCAAAAGTTTTTTA+TGG - chr5.3:71354521-71354540 None:intergenic 25.0%
AAGCATGAATAGAAAAACCT+GGG - chr5.3:71353058-71353077 None:intergenic 30.0%
AATGCAATATCAAAAAAGGC+AGG + chr5.3:71352883-71352902 MS.gene37596:CDS 30.0%
ACATTATTCTCGAACGAAAT+TGG - chr5.3:71355380-71355399 None:intergenic 30.0%
ACCTTAGATGCAGTTATATA+TGG + chr5.3:71355512-71355531 MS.gene37596:intron 30.0%
ACTGTAAAACTTCATTGTGA+AGG + chr5.3:71353407-71353426 MS.gene37596:intron 30.0%
AGCGTCAAAAAACAAAACAA+CGG - chr5.3:71353536-71353555 None:intergenic 30.0%
AGCTACATTTATCTACTTCA+GGG + chr5.3:71355061-71355080 MS.gene37596:intron 30.0%
ATCAACTAGATTTATCTCAG+AGG - chr5.3:71355342-71355361 None:intergenic 30.0%
ATGCAATATCAAAAAAGGCA+GGG + chr5.3:71352884-71352903 MS.gene37596:CDS 30.0%
ATTTCGTTCGAGAATAATGT+TGG + chr5.3:71355380-71355399 MS.gene37596:intron 30.0%
CAATATGGTATAACACAAAG+TGG - chr5.3:71354417-71354436 None:intergenic 30.0%
CACTTTGTGTTATACCATAT+TGG + chr5.3:71354415-71354434 MS.gene37596:intron 30.0%
CCAAATCTATAAAGTTGCTA+TGG - chr5.3:71355412-71355431 None:intergenic 30.0%
CCATAGCAACTTTATAGATT+TGG + chr5.3:71355409-71355428 MS.gene37596:intron 30.0%
CCCAAACTCTATAAAATTCA+TGG - chr5.3:71356363-71356382 None:intergenic 30.0%
CCTACAACCAGATTTAAAAA+AGG + chr5.3:71352951-71352970 MS.gene37596:CDS 30.0%
CTGATAAGCTATTATGAAGA+GGG + chr5.3:71356599-71356618 MS.gene37596:intron 30.0%
GAAGCATATGTGACAAAATA+TGG + chr5.3:71352847-71352866 MS.gene37596:CDS 30.0%
GGCATAATAGTTCATAGTTA+GGG + chr5.3:71356759-71356778 MS.gene37596:intron 30.0%
TAACCATGCCTACAAAATTA+AGG + chr5.3:71353444-71353463 MS.gene37596:intron 30.0%
TATACACCAAAGATTTCGAA+AGG + chr5.3:71355293-71355312 MS.gene37596:intron 30.0%
TATGTGACAAAATATGGAGT+CGG + chr5.3:71352853-71352872 MS.gene37596:CDS 30.0%
TCAATCATTTCCTTACTTAG+GGG - chr5.3:71356176-71356195 None:intergenic 30.0%
TCCATATATAACTGCATCTA+AGG - chr5.3:71355516-71355535 None:intergenic 30.0%
TCTGATAAGCTATTATGAAG+AGG + chr5.3:71356598-71356617 MS.gene37596:intron 30.0%
TGGCATAATAGTTCATAGTT+AGG + chr5.3:71356758-71356777 MS.gene37596:intron 30.0%
TTTATATGAGTTCAGTTCAG+CGG + chr5.3:71354909-71354928 MS.gene37596:intron 30.0%
! ATGAGTTGAAAAAAGGAACA+TGG + chr5.3:71352800-71352819 MS.gene37596:CDS 30.0%
! ATGTTTAGGACGTTAAAACA+TGG + chr5.3:71353271-71353290 MS.gene37596:intron 30.0%
! GAAGAAAAAAGTTGGTTATG+TGG - chr5.3:71355711-71355730 None:intergenic 30.0%
! GATGATAAGTTGAATGGTAA+TGG + chr5.3:71354598-71354617 MS.gene37596:CDS 30.0%
! GCCATGAATTTTATAGAGTT+TGG + chr5.3:71356359-71356378 MS.gene37596:intron 30.0%
! GTTTCGTTCCTTAATTTTGT+AGG - chr5.3:71353455-71353474 None:intergenic 30.0%
! TAAAATCTCTATTAGTCTCG+CGG + chr5.3:71354990-71355009 MS.gene37596:intron 30.0%
!! AATTTGGAAGCTGATTTTTC+GGG - chr5.3:71354762-71354781 None:intergenic 30.0%
!! GTAGTCATTTTAGACCATTT+GGG - chr5.3:71353036-71353055 None:intergenic 30.0%
!! GTATTTTGGATGTATGAACA+TGG - chr5.3:71355146-71355165 None:intergenic 30.0%
!! TAGTTGATAAAAAAGGGAAG+AGG + chr5.3:71355354-71355373 MS.gene37596:intron 30.0%
!! TGGTTGTTTTCTTGATATAG+AGG - chr5.3:71354326-71354345 None:intergenic 30.0%
!!! AATGGTCCCTTTTTTAAATC+TGG - chr5.3:71352961-71352980 None:intergenic 30.0%
!!! ATATATTTTTTCAGCAGTGG+TGG + chr5.3:71356335-71356354 MS.gene37596:intron 30.0%
!!! CCTTTTTTAAATCTGGTTGT+AGG - chr5.3:71352954-71352973 None:intergenic 30.0%
!!! GAAAAAGTTGTCGTTTTAGA+TGG + chr5.3:71352920-71352939 MS.gene37596:CDS 30.0%
!!! GAAGTTGATAGTTCGTATTT+TGG - chr5.3:71355160-71355179 None:intergenic 30.0%
!!! GATTTTTTCAAGGCATGTTT+AGG + chr5.3:71353257-71353276 MS.gene37596:intron 30.0%
!!! TTTGGTGCTTTTTTCTTTGA+GGG - chr5.3:71354211-71354230 None:intergenic 30.0%
!!! TTTTGGTGCTTTTTTCTTTG+AGG - chr5.3:71354212-71354231 None:intergenic 30.0%
ATAGCCATAGGTATACGAAA+AGG - chr5.3:71355098-71355117 None:intergenic 35.0%
ATATGATACTGAGTCTCCTT+AGG - chr5.3:71355224-71355243 None:intergenic 35.0%
CAAAATATGGAGTCGGAAAT+TGG + chr5.3:71352860-71352879 MS.gene37596:CDS 35.0%
CAAATTTCACCTCAACTTGT+TGG - chr5.3:71354651-71354670 None:intergenic 35.0%
CAATCATTTCCTTACTTAGG+GGG - chr5.3:71356175-71356194 None:intergenic 35.0%
CAGCTACATTTATCTACTTC+AGG + chr5.3:71355060-71355079 MS.gene37596:intron 35.0%
CATGATAGAATTCAACCTCT+AGG - chr5.3:71353238-71353257 None:intergenic 35.0%
CATTGTTTGCATATACTCAC+AGG - chr5.3:71353482-71353501 None:intergenic 35.0%
CCAAAAACTTTCATACAAGG+TGG + chr5.3:71354226-71354245 MS.gene37596:intron 35.0%
CCTTTACAAATCACTTAGGA+TGG - chr5.3:71355547-71355566 None:intergenic 35.0%
CGATCCTTTACAAATCACTT+AGG - chr5.3:71355551-71355570 None:intergenic 35.0%
CGATTATACGATAAGTTTGG+AGG + chr5.3:71353009-71353028 MS.gene37596:CDS 35.0%
GAAGCATGAATAGAAAAACC+TGG - chr5.3:71353059-71353078 None:intergenic 35.0%
GACTTGGGACAGATTAATTA+TGG + chr5.3:71353319-71353338 MS.gene37596:intron 35.0%
GCACCAAAAACTTTCATACA+AGG + chr5.3:71354223-71354242 MS.gene37596:intron 35.0%
GCTACATTTATCTACTTCAG+GGG + chr5.3:71355062-71355081 MS.gene37596:intron 35.0%
TAAAATCGTAGGTGATTCTG+AGG - chr5.3:71357007-71357026 None:intergenic 35.0%
TAACAATAGCTTGGATGACA+AGG + chr5.3:71355469-71355488 MS.gene37596:intron 35.0%
TCCTAAGTATGTAGTAGCAA+AGG - chr5.3:71354380-71354399 None:intergenic 35.0%
TCTTAGAATTGTTGCTGAGA+GGG + chr5.3:71355907-71355926 MS.gene37596:intron 35.0%
TTACCTACGGATAAAATCGT+AGG - chr5.3:71357018-71357037 None:intergenic 35.0%
TTGGACTACGCGTATATTAT+AGG - chr5.3:71353207-71353226 None:intergenic 35.0%
TTGTGTCACATGTGAATTTG+AGG - chr5.3:71356397-71356416 None:intergenic 35.0%
TTTCCTGAGAAAATCTTGTG+TGG - chr5.3:71354260-71354279 None:intergenic 35.0%
TTTGGATGTATGAACATGGT+GGG - chr5.3:71355142-71355161 None:intergenic 35.0%
! AAGGTATCCTTTATATCGTG+TGG - chr5.3:71355497-71355516 None:intergenic 35.0%
! ACGATTTTATCCGTAGGTAA+TGG + chr5.3:71357018-71357037 MS.gene37596:intron 35.0%
! AGTGATTTGTAAAGGATCGT+AGG + chr5.3:71355552-71355571 MS.gene37596:intron 35.0%
! ATGTTTTCCACCATTACCTA+CGG - chr5.3:71357031-71357050 None:intergenic 35.0%
! CAACAAGTTGAGGTGAAATT+TGG + chr5.3:71354649-71354668 MS.gene37596:CDS 35.0%
! CATCATGTTTTATGCTAGGA+GGG - chr5.3:71354582-71354601 None:intergenic 35.0%
! CCACCTTGTATGAAAGTTTT+TGG - chr5.3:71354229-71354248 None:intergenic 35.0%
! CCATCCTAAGTGATTTGTAA+AGG + chr5.3:71355544-71355563 MS.gene37596:intron 35.0%
! GTTCCTTAATTTTGTAGGCA+TGG - chr5.3:71353450-71353469 None:intergenic 35.0%
! TCATCATGTTTTATGCTAGG+AGG - chr5.3:71354583-71354602 None:intergenic 35.0%
! TGAACCTTTTCGTATACCTA+TGG + chr5.3:71355091-71355110 MS.gene37596:CDS 35.0%
! TTTTCGTATACCTATGGCTA+TGG + chr5.3:71355097-71355116 MS.gene37596:CDS 35.0%
! TTTTGGATGTATGAACATGG+TGG - chr5.3:71355143-71355162 None:intergenic 35.0%
!! AAGTTGAATGGTAATGGAGA+AGG + chr5.3:71354604-71354623 MS.gene37596:CDS 35.0%
!! AATGTGGGAAGTACTTCAAT+AGG + chr5.3:71354811-71354830 MS.gene37596:CDS 35.0%
!! ATTTTATCCGTAGGTAATGG+TGG + chr5.3:71357021-71357040 MS.gene37596:intron 35.0%
!! GGTAGTCATTTTAGACCATT+TGG - chr5.3:71353037-71353056 None:intergenic 35.0%
!! TTCTAAGACCATAATTTCGG+TGG - chr5.3:71355895-71355914 None:intergenic 35.0%
AACATGCAGTGACATCCATT+TGG + chr5.3:71357046-71357065 MS.gene37596:intron 40.0%
AATGGAGAAGGTAGTTTGAG+TGG + chr5.3:71354616-71354635 MS.gene37596:CDS 40.0%
ACAAAGAGGAACAACCCTTA+TGG - chr5.3:71355935-71355954 None:intergenic 40.0%
ACATTTATCTACTTCAGGGG+TGG + chr5.3:71355065-71355084 MS.gene37596:intron 40.0%
ACTCACCTGTCAATCAAAGT+TGG - chr5.3:71354850-71354869 None:intergenic 40.0%
AGATGTGATACCATAGCCAT+AGG - chr5.3:71355110-71355129 None:intergenic 40.0%
AGGAACATGGTCAAAAGATG+AGG + chr5.3:71352813-71352832 MS.gene37596:CDS 40.0%
AGTCCAAAAAAGTGACCTAG+AGG + chr5.3:71353220-71353239 MS.gene37596:intron 40.0%
ATAAGGGTTGTTCCTCTTTG+TGG + chr5.3:71355934-71355953 MS.gene37596:intron 40.0%
ATAAGTTTGGAGGACCCAAA+TGG + chr5.3:71353019-71353038 MS.gene37596:CDS 40.0%
ATATAGCTACCTCCACAAAG+AGG - chr5.3:71355949-71355968 None:intergenic 40.0%
ATCCATTTGGCAATGACAGA+TGG + chr5.3:71357059-71357078 MS.gene37596:intron 40.0%
ATGGCATTATCTGTTCTTCC+AGG - chr5.3:71354502-71354521 None:intergenic 40.0%
ATTCATATCACCACCGTCAT+TGG - chr5.3:71352779-71352798 None:intergenic 40.0%
ATTGCAACCATGCATGCATT+TGG + chr5.3:71353916-71353935 MS.gene37596:intron 40.0%
CAAGGTTCCACACGATATAA+AGG + chr5.3:71355487-71355506 MS.gene37596:intron 40.0%
CTCACCTGTCAATCAAAGTT+GGG - chr5.3:71354849-71354868 None:intergenic 40.0%
CTTAGAATTGTTGCTGAGAG+GGG + chr5.3:71355908-71355927 MS.gene37596:intron 40.0%
CTTCCTTCATATACGATGTC+TGG + chr5.3:71355176-71355195 MS.gene37596:CDS 40.0%
GAGCAAGAAAAAGCCAATGA+CGG + chr5.3:71352763-71352782 MS.gene37596:CDS 40.0%
GCCTTTGCTACTACATACTT+AGG + chr5.3:71354376-71354395 MS.gene37596:intron 40.0%
GGAAATTAACCCTACAGTGA+CGG + chr5.3:71357133-71357152 MS.gene37596:CDS 40.0%
GTCTTAGAATTGTTGCTGAG+AGG + chr5.3:71355906-71355925 MS.gene37596:intron 40.0%
TCAATTGCTCCACATAGTAG+TGG + chr5.3:71355251-71355270 MS.gene37596:intron 40.0%
TCACCAGACATCGTATATGA+AGG - chr5.3:71355182-71355201 None:intergenic 40.0%
TCACCTGTCAATCAAAGTTG+GGG - chr5.3:71354848-71354867 None:intergenic 40.0%
TCCATTTGGCAATGACAGAT+GGG + chr5.3:71357060-71357079 MS.gene37596:intron 40.0%
TCTGAGCCTTTCGAAATCTT+TGG - chr5.3:71355302-71355321 None:intergenic 40.0%
TGCAATGAACCACTACTATG+TGG - chr5.3:71355263-71355282 None:intergenic 40.0%
TGTGTATCCAAATGCATGCA+TGG - chr5.3:71353926-71353945 None:intergenic 40.0%
TTCCTTACTTAGGGGGAAAA+AGG - chr5.3:71356168-71356187 None:intergenic 40.0%
TTGTAAAGGATCGTAGGCAA+CGG + chr5.3:71355558-71355577 MS.gene37596:intron 40.0%
! AGCTTTGCTCTGGTTTAGAA+CGG - chr5.3:71355858-71355877 None:intergenic 40.0%
! ATGGTCTAAAATGACTACCC+AGG + chr5.3:71353038-71353057 MS.gene37596:CDS 40.0%
! ATGTTTTATGCTAGGAGGGT+AGG - chr5.3:71354578-71354597 None:intergenic 40.0%
! CTATGTGGAGCAATTGATTC+TGG - chr5.3:71355248-71355267 None:intergenic 40.0%
! TCACCTACGATTTTATCCGT+AGG + chr5.3:71357012-71357031 MS.gene37596:intron 40.0%
! TGTTTTATGCTAGGAGGGTA+GGG - chr5.3:71354577-71354596 None:intergenic 40.0%
!! ACTTGATTTGTAGTGACAGC+CGG - chr5.3:71357162-71357181 None:intergenic 40.0%
!! TTGATATAGAGGTGTCTCGT+GGG - chr5.3:71354315-71354334 None:intergenic 40.0%
!!! CAACCTCTAGGTCACTTTTT+TGG - chr5.3:71353226-71353245 None:intergenic 40.0%
AAAACTCGGTATCCGATCCA+AGG + chr5.3:71355794-71355813 MS.gene37596:intron 45.0%
AACCAGAGCAAAGCTCTGTA+TGG + chr5.3:71355863-71355882 MS.gene37596:intron 45.0%
ACAGCTGCAATCGTAGATAG+AGG + chr5.3:71356957-71356976 MS.gene37596:intron 45.0%
CAAGAAAAAGCCAATGACGG+TGG + chr5.3:71352766-71352785 MS.gene37596:CDS 45.0%
CTTTCATACAAGGTGGCAAG+TGG + chr5.3:71354233-71354252 MS.gene37596:intron 45.0%
GGACTTGTCCACCGAAATTA+TGG + chr5.3:71355884-71355903 MS.gene37596:intron 45.0%
TGATACTGAGTCTCCTTAGG+TGG - chr5.3:71355221-71355240 None:intergenic 45.0%
TTCTAGCAGCCAACAAGTTG+AGG + chr5.3:71354639-71354658 MS.gene37596:CDS 45.0%
! AGCCTTTTTCCCCCTAAGTA+AGG + chr5.3:71356163-71356182 MS.gene37596:intron 45.0%
! ATGTATGAACATGGTGGGAG+TGG - chr5.3:71355137-71355156 None:intergenic 45.0%
! CTTTGCTCTGGTTTAGAACG+GGG - chr5.3:71355856-71355875 None:intergenic 45.0%
! GCTTTGCTCTGGTTTAGAAC+GGG - chr5.3:71355857-71355876 None:intergenic 45.0%
! GGGATAACCCTAGAGTTTTG+GGG - chr5.3:71354294-71354313 None:intergenic 45.0%
! GGGGATAACCCTAGAGTTTT+GGG - chr5.3:71354295-71354314 None:intergenic 45.0%
! GGTCCACACAAGATTTTCTC+AGG + chr5.3:71354254-71354273 MS.gene37596:intron 45.0%
! TGGGGATAACCCTAGAGTTT+TGG - chr5.3:71354296-71354315 None:intergenic 45.0%
!! CTTGATATAGAGGTGTCTCG+TGG - chr5.3:71354316-71354335 None:intergenic 45.0%
!! GGATAACCCTAGAGTTTTGG+GGG - chr5.3:71354293-71354312 None:intergenic 45.0%
!! TGATATAGAGGTGTCTCGTG+GGG - chr5.3:71354314-71354333 None:intergenic 45.0%
!!! TCCTTAGGTGGTGGATTTTG+CGG - chr5.3:71355209-71355228 None:intergenic 45.0%
!!! TTTTCTTTGGGACAGTTGCC+TGG + chr5.3:71354481-71354500 MS.gene37596:intron 45.0%
!! CAAAAAATAAATAAATAATA+AGG + chr5.3:71353726-71353745 MS.gene37596:intron 5.0%
!! TTTAAGAAATTTATAATTAT+GGG - chr5.3:71353355-71353374 None:intergenic 5.0%
!!! AACATATTTTTATTTTTTTT+TGG - chr5.3:71355033-71355052 None:intergenic 5.0%
AAGGCAGGGCTTAAACGTTG+TGG + chr5.3:71352898-71352917 MS.gene37596:CDS 50.0%
AGAGTAGCCCCCAAAACTCT+AGG + chr5.3:71354283-71354302 MS.gene37596:intron 50.0%
AGGGTTGTTCCTCTTTGTGG+AGG + chr5.3:71355937-71355956 MS.gene37596:intron 50.0%
CGACCCCAACTTTGATTGAC+AGG + chr5.3:71354842-71354861 MS.gene37596:CDS 50.0%
GAGTAGCCCCCAAAACTCTA+GGG + chr5.3:71354284-71354303 MS.gene37596:intron 50.0%
GCCCATCTGTCATTGCCAAA+TGG - chr5.3:71357064-71357083 None:intergenic 50.0%
GGGTTAATTTCCGTATCCCG+TGG - chr5.3:71357125-71357144 None:intergenic 50.0%
GTCCATACAGAGCTTTGCTC+TGG - chr5.3:71355868-71355887 None:intergenic 50.0%
TACTGAGTCTCCTTAGGTGG+TGG - chr5.3:71355218-71355237 None:intergenic 50.0%
TCCGCAAAATCCACCACCTA+AGG + chr5.3:71355205-71355224 MS.gene37596:intron 50.0%
TTGCTGAGAGGGGACCATAA+GGG + chr5.3:71355918-71355937 MS.gene37596:intron 50.0%
! TATGAACATGGTGGGAGTGG+AGG - chr5.3:71355134-71355153 None:intergenic 50.0%
!! AACCCTACAGTGACGGATTC+CGG + chr5.3:71357140-71357159 MS.gene37596:CDS 50.0%
AGCCGGAATCCGTCACTGTA+GGG - chr5.3:71357145-71357164 None:intergenic 55.0%
ATCCCGTGGACATTGACCGA+CGG - chr5.3:71357111-71357130 None:intergenic 55.0%
CGGTCAATGTCCACGGGATA+CGG + chr5.3:71357112-71357131 MS.gene37596:CDS 55.0%
GTATCCGATCCAAGGACCGA+AGG + chr5.3:71355802-71355821 MS.gene37596:intron 55.0%
GTCTCCTTCGGTCCTTGGAT+CGG - chr5.3:71355809-71355828 None:intergenic 55.0%
GTTGCTGAGAGGGGACCATA+AGG + chr5.3:71355917-71355936 MS.gene37596:intron 55.0%
!! GATTGGTCTCCTTCGGTCCT+TGG - chr5.3:71355814-71355833 None:intergenic 55.0%
AGCCGTCGGTCAATGTCCAC+GGG + chr5.3:71357106-71357125 MS.gene37596:CDS 60.0%
CAGCCGGAATCCGTCACTGT+AGG - chr5.3:71357146-71357165 None:intergenic 60.0%
CAGCCGTCGGTCAATGTCCA+CGG + chr5.3:71357105-71357124 MS.gene37596:CDS 60.0%
GTTGCCAGTCGTTCAGCCGT+CGG + chr5.3:71357092-71357111 MS.gene37596:CDS 60.0%
TTGACCGACGGCTGAACGAC+TGG - chr5.3:71357099-71357118 None:intergenic 60.0%
!! GCGGTGGGATTGGTCTCCTT+CGG - chr5.3:71355821-71355840 None:intergenic 60.0%
AATCCCACCGCCCACTTGCG+GGG + chr5.3:71355830-71355849 MS.gene37596:intron 65.0%
CAATCCCACCGCCCACTTGC+GGG + chr5.3:71355829-71355848 MS.gene37596:intron 65.0%
CCAATCCCACCGCCCACTTG+CGG + chr5.3:71355828-71355847 MS.gene37596:intron 65.0%
TAGAACGGGGCCCCGCAAGT+GGG - chr5.3:71355843-71355862 None:intergenic 65.0%
TTAGAACGGGGCCCCGCAAG+TGG - chr5.3:71355844-71355863 None:intergenic 65.0%
CCGCAAGTGGGCGGTGGGAT+TGG - chr5.3:71355831-71355850 None:intergenic 70.0%
AACGGGGCCCCGCAAGTGGG+CGG - chr5.3:71355840-71355859 None:intergenic 75.0%
! GGGCCCCGCAAGTGGGCGGT+GGG - chr5.3:71355836-71355855 None:intergenic 80.0%
! GGGGCCCCGCAAGTGGGCGG+TGG - chr5.3:71355837-71355856 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 71352748 71357190 71352748 ID=MS.gene37596
chr5.3 mRNA 71352748 71357190 71352748 ID=MS.gene37596.t1;Parent=MS.gene37596
chr5.3 exon 71352748 71353059 71352748 ID=MS.gene37596.t1.exon1;Parent=MS.gene37596.t1
chr5.3 CDS 71352748 71353059 71352748 ID=cds.MS.gene37596.t1;Parent=MS.gene37596.t1
chr5.3 exon 71354496 71354863 71354496 ID=MS.gene37596.t1.exon2;Parent=MS.gene37596.t1
chr5.3 CDS 71354496 71354863 71354496 ID=cds.MS.gene37596.t1;Parent=MS.gene37596.t1
chr5.3 exon 71355082 71355197 71355082 ID=MS.gene37596.t1.exon3;Parent=MS.gene37596.t1
chr5.3 CDS 71355082 71355197 71355082 ID=cds.MS.gene37596.t1;Parent=MS.gene37596.t1
chr5.3 exon 71357078 71357190 71357078 ID=MS.gene37596.t1.exon4;Parent=MS.gene37596.t1
chr5.3 CDS 71357078 71357190 71357078 ID=cds.MS.gene37596.t1;Parent=MS.gene37596.t1
Gene Sequence

>MS.gene37596

ATGTCTTTGTCTTCGGAGCAAGAAAAAGCCAATGACGGTGGTGATATGAATGATGAGTTGAAAAAAGGAACATGGTCAAAAGATGAGGATGAAATATTAGAAGCATATGTGACAAAATATGGAGTCGGAAATTGGAATGCAATATCAAAAAAGGCAGGGCTTAAACGTTGTGGAAAAAGTTGTCGTTTTAGATGGTATAATCACCTACAACCAGATTTAAAAAAGGGACCATTTAGTGAAGAAGAAGAAAAAAAAGTTATTCGATTATACGATAAGTTTGGAGGACCCAAATGGTCTAAAATGACTACCCAGGTTTTTCTATTCATGCTTCATATTTTCTTTTAGTGTTAATTGTTCAAATTGATCATGTAATATATACTATATTCAAAAAATGACTTTGTAAAATAAGAAACATATATTATAGTCTTGTAATTTGATATTATTCTTATTTTTAATCCTATAATATACGCGTAGTCCAAAAAAGTGACCTAGAGGTTGAATTCTATCATGATTTTTTCAAGGCATGTTTAGGACGTTAAAACATGGTTTTGCACAAAAATTATATTTTTTCGACTTGGGACAGATTAATTATGGATTTTTATTTCCCATAATTATAAATTTCTTAAACAATTTATAATTAATTTGTCTCTCGTTTAAAAACTGTAAAACTTCATTGTGAAGGTTCTTATTATGTTCTAACCATGCCTACAAAATTAAGGAACGAAACTTGACCTGTGAGTATATGCAAACAATGAGCTCAAAATTCAATTTATAATTCAAGATTTCCGTTGTTTTGTTTTTTGACGCTTTAAAAATTCATAACTAATTTGTTGCTTGACAAAAATTTCTAATTTTTTGTGTAAAGCCATATTTTATCGTTCTTAATATGCCATTAGAAAATCATGAAAAAATTCAATCTCTAAATTGATTTTTTGGACTTCACGTATATCTCAGAGTCATAAATAATAAGGATTTTGTCAAAAAATAAATAAATAATAAGGATCTCGAATTATAGGATCAGAATATTTTTTTTGACAAGTATAGGATCAGAATATGTTTTTTTATTTTACAAGATCATTTGTTAGATTTCACATATATTACATGGTCAAATTCAATAATTAACCCTTTCTTTTAAATTTGAAATTGATATGATCTATATCAATCTACAATTGCAACCATGCATGCATTTGGATACACATTATGCAATTTAATCGAATACTATTCTATTATTTGTATGTTGTTATTAATTTCTGACGTTATATTTGATCCCAAATATTAAATATTGATCCAACAAAAAATAATATGATTTTTTTTCAAATATTATGATTTTTTTTTTTCTTTCTGCAATTGCAAACTTTTATTATGAAACTCTTAGAACAAAGTACAATACAAGCAATATATACTTTAAACAAGAAAAGAGAGATACAACACTGTCACAACATTACAAATCGAAACTACTACCCTCAAAGAAAAAAGCACCAAAAACTTTCATACAAGGTGGCAAGTGGTCCACACAAGATTTTCTCAGGAAACAAAGAGTAGCCCCCAAAACTCTAGGGTTATCCCCACGAGACACCTCTATATCAAGAAAACAACCACAACTGAAAAAAAAAAAGATGTTATACATAGCCTTTGCTACTACATACTTAGGAGACTCAAATATTTACCACTTTGTGTTATACCATATTGGTTATTTAGATTAGTTTGTTGATCATGTAATTATTTTGTATTTGTTTTCTTTGGGACAGTTGCCTGGAAGAACAGATAATGCCATAAAAAACTTTTGGAATGCAAGAAAAAGAAAACTTGAAAGACATGGCTTGTCACCCTACCCTCCTAGCATAAAACATGATGATAAGTTGAATGGTAATGGAGAAGGTAGTTTGAGTGGTTCTAGCAGCCAACAAGTTGAGGTGAAATTTGGAAAAGATTTTTTGGGTAGAAAATATCCATCAATTTGTGATGAGATAAATGAAAACAACGTTGAAAAACGTTCAAACTTATATGATGTCCCGAAAAATCAGCTTCCAAATTTTTCTGATGATTCAAATATGCTATACAATAATGTGGGAAGTACTTCAATAGGCAATCATACGACCCCAACTTTGATTGACAGGTGAGTAGATTATGCAATGTCAATTCAAATTATACGTTAAAAATGTTTATATGAGTTCAGTTCAGCGGTGAGAGTTTGACTTTATAACTTCAAGGGATAAAGTTTAAATCTGATATGGGACATATGTAAAATCTCTATTAGTCTCGCGGTTATAAATAATAATTTTCCAAAAAAAAATAAAAATATGTTAGACTTACAGCTACATTTATCTACTTCAGGGGTGGCGTTGAACCTTTTCGTATACCTATGGCTATGGTATCACATCTTCCTCCACTCCCACCATGTTCATACATCCAAAATACGAACTATCAACTTCCTTCATATACGATGTCTGGTGAGTATCCGCAAAATCCACCACCTAAGGAGACTCAGTATCATATGCCAGAATCAATTGCTCCACATAGTAGTGGTTCATTGCAGTCCATTTTCTATACACCAAAGATTTCGAAAGGCTCAGATGCTAGTCGAATGCATTCCTCTGAGATAAATCTAGTTGATAAAAAAGGGAAGAGGCCAATTTCGTTCGAGAATAATGTTGGAGAAAACCATAGCAACTTTATAGATTTGGATCTTTTGTTTGACTCAAGTTCATTAGATAATGAAAATAACAATAGCTTGGATGACAAGGTTCCACACGATATAAAGGATACCTTAGATGCAGTTATATATGGAAAAAGCTTCCATCCTAAGTGATTTGTAAAGGATCGTAGGCAACGGCAAGTCAGCTTATAGTGTGCTTGAAGTTGCAGTGCAAGTTTCCTTTTTTGTTTTTTCCTCTTTTGAGATTTGATTTGTTTTATATGTTTTTTGGCAAAACAATTTAGTCTAATTGATCTATTTTATTCCACATAACCAACTTTTTTCTTCTTCACAATGTTGTTTTTTAAATGTGAATTATTATTGTTATTGGTCTTAGAATTGTTTTTTTTTAAAACTCGGTATCCGATCCAAGGACCGAAGGAGACCAATCCCACCGCCCACTTGCGGGGCCCCGTTCTAAACCAGAGCAAAGCTCTGTATGGACTTGTCCACCGAAATTATGGTCTTAGAATTGTTGCTGAGAGGGGACCATAAGGGTTGTTCCTCTTTGTGGAGGTAGCTATATATATAGAACAAAATGAGACAATATTGGTGTATTATATGTAAATGATTCATATAAGCGTACAACAACATTAATCTTACTATACCAGATTGTATTGAACACATTTTAAGTAATGAAATGCTATAAGTCTTTTCCTATCAAAAAAAAAAAAACAACATTAATCTTCCCTCAAAAAAAAAAAAAAACATTAATCTTAAAGCCTTTTTCCCCCTAAGTAAGGAAATGATTGAAATCAATTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATGAAAATTACTCAAATTTGAACAATTGTTTACATATTATATATTTTTTCAGCAGTGGTGGAGCCATGAATTTTATAGAGTTTGGGTAAAATTGTAACCTCAAATTCACATGTGACACAATATATAAATAATCATAAATCGAAATAAAAGAGACTCTTCATTTTATCAACAAAAGTACAATTGAAATAAGACAGATGAAACATAACCTATCAATAATGTGCTAAACAAAATTGGGAAGTGATTGTAAGTTTTTTTAGGTATGAAGTGATTGTAAGTTGTAACTTGATAGTATGTCATTTTGTCTGATAAGCTATTATGAAGAGGGCTTCAAATTTTGTTACCATAAATTAAGTGAGAAATGAAGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTGATTTCTGTGAGTGTTGAGTATTGGTTTGGGTGAATGGCATAATAGTTCATAGTTAGGGAGAATTATTCTAATTTAGTCACTTCGAGAATTTATTTTAAAAATTGATTAAAGTAATCAATTTCAAATTCCAATGATATTGATTAAACTAATTTTAATGGTAATCTTATGATTTATTCATTTTTAGAATTTAAAGTAGAAAAGAAAAAAAAATAAAGCAATGATAAGTTTTAGTGACAGCTGCAATCGTAGATAGAGGTCTTTAATGTTTTCAAAATGGTATCCTCAGAATCACCTACGATTTTATCCGTAGGTAATGGTGGAAAACATGCAGTGACATCCATTTGGCAATGACAGATGGGCATATTTTCGTTGCCAGTCGTTCAGCCGTCGGTCAATGTCCACGGGATACGGAAATTAACCCTACAGTGACGGATTCCGGCTGTCACTACAAATCAAGTTTCTTGTAA
Protein sequence

>MS.gene37596.t1

MSLSSEQEKANDGGDMNDELKKGTWSKDEDEILEAYVTKYGVGNWNAISKKAGLKRCGKSCRFRWYNHLQPDLKKGPFSEEEEKKVIRLYDKFGGPKWSKMTTQLPGRTDNAIKNFWNARKRKLERHGLSPYPPSIKHDDKLNGNGEGSLSGSSSQQVEVKFGKDFLGRKYPSICDEINENNVEKRSNLYDVPKNQLPNFSDDSNMLYNNVGSTSIGNHTTPTLIDRGGVEPFRIPMAMVSHLPPLPPCSYIQNTNYQLPSYTMSDGHIFVASRSAVGQCPRDTEINPTVTDSGCHYKSSFL