AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37628

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37628.t1 MTR_5g062790 75.161 310 25 4 1 264 1 304 2.03e-154 432
MS.gene37628.t1 MTR_5g088640 71.972 289 23 8 9 264 12 275 5.26e-129 367
MS.gene37628.t1 MTR_5g088080 71.583 278 27 6 9 259 12 264 1.39e-126 360
MS.gene37628.t1 MTR_5g088150 71.583 278 27 6 9 259 12 264 1.39e-126 360
MS.gene37628.t1 MTR_5g488210 71.583 278 27 6 9 259 12 264 1.39e-126 360
MS.gene37628.t1 MTR_5g488170 78.182 220 21 3 9 201 12 231 2.40e-114 328
MS.gene37628.t1 MTR_4g128190 54.610 282 46 9 1 243 1 239 1.58e-83 250
MS.gene37628.t1 MTR_5g088610 72.611 157 40 1 1 154 1 157 2.36e-74 231
MS.gene37628.t1 MTR_1g085770 54.054 222 81 8 2 205 4 222 1.00e-61 197
MS.gene37628.t1 MTR_1g085880 61.765 170 57 5 2 163 4 173 2.81e-58 184
MS.gene37628.t1 MTR_1g021230 42.690 171 84 3 10 167 58 227 6.59e-41 146
MS.gene37628.t1 MTR_3g052450 47.297 148 75 3 7 152 38 184 1.21e-39 144
MS.gene37628.t1 MTR_1g083630 50.676 148 68 3 1 144 1 147 1.22e-39 145
MS.gene37628.t1 MTR_1g017000 41.341 179 95 4 9 178 12 189 1.24e-39 138
MS.gene37628.t1 MTR_3g052430 52.542 118 55 1 7 124 39 155 1.05e-38 142
MS.gene37628.t1 MTR_8g042410 38.265 196 104 3 3 191 31 216 2.63e-38 140
MS.gene37628.t1 MTR_4g073420 49.231 130 62 3 7 135 10 136 2.08e-37 133
MS.gene37628.t1 MTR_0008s0280 50.847 118 57 1 9 126 12 128 4.61e-37 131
MS.gene37628.t1 MTR_5g029840 52.066 121 56 2 9 128 12 131 5.59e-37 133
MS.gene37628.t1 MTR_2g088170 53.782 119 54 1 10 128 30 147 7.80e-37 135
MS.gene37628.t1 MTR_3g461490 50.427 117 56 2 9 124 12 127 9.19e-37 132
MS.gene37628.t1 MTR_3g011610 39.130 161 91 3 10 164 38 197 1.01e-36 136
MS.gene37628.t1 MTR_8g095390 53.509 114 51 2 8 120 11 123 7.09e-36 130
MS.gene37628.t1 MTR_3g097450 52.632 114 52 2 8 120 11 123 2.12e-35 128
MS.gene37628.t1 MTR_2g089620 52.212 113 52 2 10 121 13 124 2.16e-35 129
MS.gene37628.t1 MTR_5g007370 48.092 131 64 3 10 137 13 142 2.60e-35 128
MS.gene37628.t1 MTR_7g035075 50.000 116 57 1 2 117 7 121 5.35e-35 125
MS.gene37628.t1 MTR_4g091490 51.327 113 53 2 10 121 14 125 6.68e-35 128
MS.gene37628.t1 MTR_2g064160 48.718 117 58 2 5 120 7 122 9.16e-35 127
MS.gene37628.t1 MTR_1g043080 51.456 103 49 1 10 112 13 114 9.25e-35 125
MS.gene37628.t1 MTR_2g011660 52.212 113 52 2 10 121 14 125 9.29e-35 128
MS.gene37628.t1 MTR_4g478180 50.000 116 56 2 10 124 14 128 1.11e-34 128
MS.gene37628.t1 MTR_7g110830 45.270 148 70 4 10 147 13 159 1.24e-34 128
MS.gene37628.t1 MTR_3g074520 48.333 120 60 2 10 128 13 131 1.38e-34 127
MS.gene37628.t1 MTR_6g006030 51.351 111 53 1 2 112 7 116 1.50e-34 124
MS.gene37628.t1 MTR_7g115650 50.467 107 51 2 10 115 13 118 2.11e-34 123
MS.gene37628.t1 MTR_7g076740 50.442 113 53 3 10 120 13 124 2.19e-34 126
MS.gene37628.t1 MTR_1g076150 51.456 103 49 1 10 112 13 114 2.84e-34 124
MS.gene37628.t1 MTR_1g085640 45.522 134 71 2 10 142 13 145 4.27e-34 127
MS.gene37628.t1 MTR_1g085040 48.413 126 59 3 10 130 13 137 5.20e-34 126
MS.gene37628.t1 MTR_4g065017 43.056 144 75 3 10 147 18 160 5.68e-34 125
MS.gene37628.t1 MTR_0008s0390 46.825 126 59 3 10 135 14 131 6.03e-34 124
MS.gene37628.t1 MTR_1g043050 49.558 113 54 2 10 120 13 124 8.65e-34 123
MS.gene37628.t1 MTR_4g105130 42.254 142 80 2 10 150 13 153 1.07e-33 125
MS.gene37628.t1 MTR_1g100653 42.400 125 71 1 9 133 12 135 1.38e-33 124
MS.gene37628.t1 MTR_5g078140 45.652 138 71 3 10 146 13 147 1.64e-33 124
MS.gene37628.t1 MTR_1g110460 37.500 176 80 4 10 156 27 201 1.89e-33 124
MS.gene37628.t1 MTR_2g097910 49.180 122 57 3 10 130 21 138 1.90e-33 124
MS.gene37628.t1 MTR_6g009430 48.718 117 58 2 9 124 12 127 2.04e-33 124
MS.gene37628.t1 MTR_0251s0050 40.845 142 74 3 10 150 14 146 2.33e-33 122
MS.gene37628.t1 MTR_8g017440 47.154 123 62 3 2 122 5 126 2.71e-33 124
MS.gene37628.t1 MTR_3g065440 46.457 127 66 2 10 135 13 138 2.85e-33 123
MS.gene37628.t1 MTR_3g077110 50.000 116 56 2 10 124 13 127 3.05e-33 124
MS.gene37628.t1 MTR_1g112760 47.581 124 63 2 2 124 6 128 3.57e-33 120
MS.gene37628.t1 MTR_6g012690 46.032 126 66 2 10 134 13 137 5.01e-33 123
MS.gene37628.t1 MTR_5g079670 40.136 147 86 2 11 156 13 158 5.55e-33 120
MS.gene37628.t1 MTR_1g017140 55.140 107 46 2 7 112 10 115 5.75e-33 123
MS.gene37628.t1 MTR_2g095520 56.311 103 43 2 7 108 10 111 6.34e-33 122
MS.gene37628.t1 MTR_7g011170 47.414 116 59 2 10 124 13 127 1.31e-32 121
MS.gene37628.t1 MTR_4g057635 54.286 105 46 2 9 112 12 115 1.55e-32 121
MS.gene37628.t1 MTR_5g014990 54.206 107 47 2 7 112 10 115 1.83e-32 121
MS.gene37628.t1 MTR_2g089450 50.485 103 50 1 10 112 13 114 2.28e-32 119
MS.gene37628.t1 MTR_8g031360 48.673 113 55 3 10 120 14 125 2.49e-32 120
MS.gene37628.t1 MTR_2g099740 47.500 120 61 2 2 120 5 123 2.62e-32 122
MS.gene37628.t1 MTR_0008s0470 43.704 135 65 4 10 141 14 140 3.38e-32 120
MS.gene37628.t1 MTR_3g028740 51.456 103 49 1 10 112 23 124 3.58e-32 121
MS.gene37628.t1 MTR_4g485530 47.748 111 56 2 11 120 14 123 4.23e-32 117
MS.gene37628.t1 MTR_4g082290 44.776 134 70 3 10 140 13 145 4.73e-32 122
MS.gene37628.t1 MTR_4g097570 55.882 102 43 2 7 107 10 110 4.93e-32 119
MS.gene37628.t1 MTR_7g111290 55.102 98 43 1 10 107 13 109 5.04e-32 121
MS.gene37628.t1 MTR_8g017500 46.903 113 58 2 9 120 12 123 7.94e-32 120
MS.gene37628.t1 MTR_1g086530 43.966 116 64 1 1 116 25 139 8.84e-32 118
MS.gene37628.t1 MTR_3g103570 52.336 107 49 2 7 112 10 115 1.01e-31 120
MS.gene37628.t1 MTR_1g062940 51.456 103 49 1 10 112 7 108 1.35e-31 116
MS.gene37628.t1 MTR_7g096930 48.544 103 52 1 10 112 13 114 1.50e-31 118
MS.gene37628.t1 MTR_4g082230 44.030 134 71 3 10 140 13 145 1.95e-31 120
MS.gene37628.t1 MTR_4g102380 49.123 114 56 2 9 121 12 124 2.04e-31 117
MS.gene37628.t1 MTR_8g017540 47.748 111 57 1 2 112 51 160 2.20e-31 120
MS.gene37628.t1 MTR_8g020490 49.533 107 52 2 11 116 10 115 2.21e-31 117
MS.gene37628.t1 MTR_4g029540 43.624 149 78 4 7 151 8 154 2.33e-31 117
MS.gene37628.t1 MTR_5g010020 50.000 100 49 1 9 108 12 110 2.38e-31 119
MS.gene37628.t1 MTR_7g102110 41.830 153 73 4 7 158 10 147 2.39e-31 117
MS.gene37628.t1 MTR_4g121460 49.515 103 51 1 10 112 13 114 3.72e-31 118
MS.gene37628.t1 MTR_5g042030 48.276 116 58 2 10 124 8 122 4.66e-31 117
MS.gene37628.t1 MTR_4g128670 53.398 103 46 2 7 108 10 111 5.05e-31 118
MS.gene37628.t1 MTR_8g098860 45.690 116 61 2 2 116 5 119 5.28e-31 117
MS.gene37628.t1 MTR_0063s0090 45.794 107 57 1 9 115 12 117 5.76e-31 115
MS.gene37628.t1 MTR_1g073170 49.057 106 53 1 10 115 21 125 7.89e-31 115
MS.gene37628.t1 MTR_0140s0030 48.598 107 53 2 10 115 14 119 1.29e-30 117
MS.gene37628.t1 MTR_0489s0020 48.598 107 53 2 10 115 14 119 1.29e-30 117
MS.gene37628.t1 MTR_1g086510 46.296 108 57 1 9 116 21 127 1.47e-30 115
MS.gene37628.t1 MTR_4g097570 55.340 103 43 3 7 107 10 111 1.86e-30 115
MS.gene37628.t1 MTR_4g100720 39.241 158 91 5 11 166 15 169 2.55e-30 112
MS.gene37628.t1 MTR_6g090405 36.413 184 107 6 9 190 12 187 2.76e-30 114
MS.gene37628.t1 MTR_3g083540 42.975 121 67 2 5 124 37 156 3.20e-30 115
MS.gene37628.t1 MTR_4g063100 44.538 119 62 2 5 120 3 120 8.75e-30 112
MS.gene37628.t1 MTR_6g012180 48.000 100 51 1 9 108 12 110 8.82e-30 114
MS.gene37628.t1 MTR_8g006470 46.789 109 56 2 8 115 9 116 1.10e-29 113
MS.gene37628.t1 MTR_8g027345 47.170 106 55 1 11 116 14 118 1.27e-29 113
MS.gene37628.t1 MTR_7g010210 48.148 108 54 2 9 115 12 118 1.45e-29 112
MS.gene37628.t1 MTR_3g039990 46.296 108 57 1 9 116 13 119 1.54e-29 113
MS.gene37628.t1 MTR_7g010210 48.148 108 54 2 9 115 12 118 2.11e-29 113
MS.gene37628.t1 MTR_2g089420 47.573 103 53 1 10 112 12 113 2.50e-29 115
MS.gene37628.t1 MTR_8g017340 47.107 121 61 3 2 120 5 124 2.53e-29 115
MS.gene37628.t1 MTR_2g067420 50.485 103 50 1 7 109 12 113 2.88e-29 113
MS.gene37628.t1 MTR_4g125520 48.980 98 49 1 11 108 14 110 3.88e-29 112
MS.gene37628.t1 MTR_1g045610 44.643 112 58 2 10 121 22 129 4.88e-29 110
MS.gene37628.t1 MTR_8g017390 48.571 105 52 2 9 112 12 115 5.02e-29 114
MS.gene37628.t1 MTR_7g087130 49.533 107 52 2 10 115 13 118 5.81e-29 112
MS.gene37628.t1 MTR_8g017350 46.281 121 62 3 2 120 5 124 6.16e-29 115
MS.gene37628.t1 MTR_7g117730 46.939 98 51 1 11 108 14 110 6.40e-29 110
MS.gene37628.t1 MTR_2g034790 48.544 103 52 1 10 112 13 114 6.73e-29 112
MS.gene37628.t1 MTR_1g100667 45.872 109 58 1 10 118 14 121 9.10e-29 110
MS.gene37628.t1 MTR_6g055910 47.222 108 56 1 10 117 15 121 9.95e-29 110
MS.gene37628.t1 MTR_5g078910 47.573 103 53 1 10 112 8 109 1.21e-28 110
MS.gene37628.t1 MTR_2g033170 47.664 107 55 1 10 116 25 130 1.99e-28 110
MS.gene37628.t1 MTR_7g109320 52.525 99 46 1 10 108 13 110 5.66e-28 110
MS.gene37628.t1 MTR_5g079290 45.192 104 56 1 9 112 17 119 1.50e-27 107
MS.gene37628.t1 MTR_7g017260 31.818 264 157 11 1 247 17 274 1.86e-27 107
MS.gene37628.t1 MTR_8g060940 44.231 104 57 1 5 108 3 105 2.29e-27 106
MS.gene37628.t1 MTR_2g096380 46.154 104 55 1 9 112 6 108 2.58e-27 105
MS.gene37628.t1 MTR_4g123040 46.729 107 56 1 10 116 25 130 3.02e-27 107
MS.gene37628.t1 MTR_5g079220 42.857 112 63 1 1 112 13 123 4.90e-27 106
MS.gene37628.t1 MTR_0197s0010 46.000 100 53 1 13 112 5 103 6.22e-27 104
MS.gene37628.t1 MTR_0193s0090 35.294 136 87 1 4 139 2 136 8.46e-27 103
MS.gene37628.t1 MTR_5g078930 39.535 129 74 2 1 129 1 125 8.63e-27 103
MS.gene37628.t1 MTR_0247s0040 41.667 108 62 1 4 111 2 108 1.80e-26 102
MS.gene37628.t1 MTR_5g078950 44.660 103 56 1 9 111 7 108 3.03e-26 103
MS.gene37628.t1 MTR_4g019370 48.624 109 49 4 11 118 38 140 5.00e-26 104
MS.gene37628.t1 MTR_5g078860 45.631 103 55 1 10 112 8 109 9.99e-26 103
MS.gene37628.t1 MTR_3g101290 45.872 109 57 2 11 119 37 143 1.04e-25 101
MS.gene37628.t1 MTR_5g079120 42.718 103 58 1 10 112 62 163 1.08e-25 103
MS.gene37628.t1 MTR_0001s0360 43.269 104 58 1 9 112 7 109 1.95e-25 101
MS.gene37628.t1 MTR_3g077650 44.737 114 59 3 11 122 181 292 2.98e-25 103
MS.gene37628.t1 MTR_5g078800 44.660 103 56 1 10 112 8 109 5.87e-25 100
MS.gene37628.t1 MTR_5g016510 49.515 103 49 3 11 112 5 105 6.09e-25 101
MS.gene37628.t1 MTR_7g035350 49.524 105 51 2 9 113 223 325 1.17e-24 102
MS.gene37628.t1 MTR_5g049190 43.363 113 60 3 1 112 9 118 1.22e-24 99.0
MS.gene37628.t1 MTR_3g463400 45.794 107 54 3 11 116 133 236 1.97e-24 101
MS.gene37628.t1 MTR_7g451170 46.078 102 53 2 11 112 191 290 6.15e-24 100
MS.gene37628.t1 MTR_4g105660 45.631 103 52 3 11 112 180 279 7.07e-24 100
MS.gene37628.t1 MTR_5g070020 43.363 113 60 3 5 116 116 225 8.48e-24 99.0
MS.gene37628.t1 MTR_6g015455 48.980 98 46 3 11 107 5 99 2.76e-23 99.4
MS.gene37628.t1 MTR_3g045430 37.903 124 75 2 2 124 6 128 5.58e-23 95.5
MS.gene37628.t1 MTR_6g074860 39.048 105 62 2 11 115 4 106 6.28e-23 94.4
MS.gene37628.t1 MTR_7g037260 45.098 102 54 2 11 112 145 244 6.59e-23 96.3
MS.gene37628.t1 MTR_5g082910 47.959 98 49 2 11 108 19 114 7.84e-23 95.1
MS.gene37628.t1 MTR_4g094982 48.544 103 50 3 11 112 5 105 1.39e-22 94.0
MS.gene37628.t1 MTR_6g027340 37.719 114 69 2 11 124 16 127 1.43e-22 92.4
MS.gene37628.t1 MTR_7g450950 39.823 113 66 2 4 116 150 260 2.93e-22 94.4
MS.gene37628.t1 MTR_7g111290 56.716 67 28 1 41 107 2 67 3.09e-22 94.4
MS.gene37628.t1 MTR_4g088015 44.118 102 55 2 11 112 221 320 3.16e-22 95.5
MS.gene37628.t1 MTR_1g057980 31.156 199 117 5 10 192 79 273 3.41e-22 93.6
MS.gene37628.t1 MTR_5g010650 48.454 97 48 2 11 107 110 204 4.79e-22 95.1
MS.gene37628.t1 MTR_4g063100 49.398 83 38 2 41 120 10 91 7.86e-22 90.9
MS.gene37628.t1 MTR_7g037130 43.396 106 58 2 11 116 145 248 1.28e-21 92.8
MS.gene37628.t1 MTR_6g027360 38.261 115 67 3 11 124 78 189 5.22e-21 90.5
MS.gene37628.t1 MTR_1g026870 41.176 102 58 2 11 112 85 184 1.11e-20 91.7
MS.gene37628.t1 MTR_1g026870 37.374 99 61 1 9 107 31 128 8.94e-15 74.3
MS.gene37628.t1 MTR_3g110028 41.176 102 58 2 11 112 85 184 1.48e-20 91.3
MS.gene37628.t1 MTR_3g110028 37.374 99 61 1 9 107 31 128 3.47e-15 75.5
MS.gene37628.t1 MTR_3g089045 41.880 117 60 4 2 112 4 118 2.17e-20 88.6
MS.gene37628.t1 MTR_2g096380 51.389 72 34 1 41 112 19 89 2.79e-20 86.7
MS.gene37628.t1 MTR_6g055910 48.684 76 38 1 42 117 18 92 5.49e-20 86.7
MS.gene37628.t1 MTR_5g007300 45.679 81 44 0 3 83 58 138 5.64e-20 84.0
MS.gene37628.t1 MTR_7g061550 42.308 104 57 2 14 115 10 112 7.46e-20 87.8
MS.gene37628.t1 MTR_7g061330 39.316 117 64 3 11 122 113 227 1.26e-19 88.2
MS.gene37628.t1 MTR_7g061330 36.082 97 61 1 11 107 61 156 2.14e-13 70.1
MS.gene37628.t1 MTR_7g461410 39.316 117 64 3 11 122 113 227 1.26e-19 88.2
MS.gene37628.t1 MTR_7g461410 36.082 97 61 1 11 107 61 156 2.14e-13 70.1
MS.gene37628.t1 MTR_7g061330 39.316 117 64 3 11 122 77 191 1.64e-19 87.8
MS.gene37628.t1 MTR_7g061330 36.082 97 61 1 11 107 25 120 2.17e-13 70.1
MS.gene37628.t1 MTR_4g082040 41.441 111 58 4 6 112 100 207 1.95e-19 87.4
MS.gene37628.t1 MTR_5g041570 40.000 110 61 3 6 112 129 236 2.47e-19 87.0
MS.gene37628.t1 MTR_7g086960 42.718 103 57 2 6 108 84 184 1.51e-18 84.3
MS.gene37628.t1 MTR_0023s0210 46.053 76 41 0 5 80 3 78 2.95e-18 77.4
MS.gene37628.t1 MTR_6g027370 37.719 114 69 2 11 124 99 210 1.02e-17 82.0
MS.gene37628.t1 MTR_5g038910 36.893 103 63 2 13 115 28 128 1.20e-14 73.6
MS.gene37628.t1 MTR_8g468380 34.951 103 65 2 13 115 24 124 1.80e-14 72.8
MS.gene37628.t1 MTR_5g038910 36.893 103 63 2 13 115 28 128 2.33e-14 72.4
MS.gene37628.t1 MTR_6g013135 36.842 114 63 4 94 204 148 255 4.32e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37628.t1 AT2G26960 45.570 158 73 2 11 156 22 178 4.30e-44 154
MS.gene37628.t1 AT2G32460 44.444 144 72 2 10 153 7 142 6.89e-41 147
MS.gene37628.t1 AT2G32460 44.444 144 72 2 10 153 19 154 7.72e-41 147
MS.gene37628.t1 AT5G55020 52.542 118 55 1 10 127 27 143 2.28e-40 146
MS.gene37628.t1 AT3G11440 51.667 120 57 1 10 129 42 160 3.05e-39 142
MS.gene37628.t1 AT5G06100 52.586 116 54 1 10 125 33 147 5.80e-39 141
MS.gene37628.t1 AT4G38620 45.161 155 79 4 7 158 10 161 8.54e-39 137
MS.gene37628.t1 AT3G11440 44.375 160 82 3 10 163 42 200 8.88e-39 142
MS.gene37628.t1 AT3G11440 44.375 160 82 3 10 163 42 200 8.88e-39 142
MS.gene37628.t1 AT3G11440 44.375 160 82 3 10 163 42 200 8.88e-39 142
MS.gene37628.t1 AT5G06100 52.586 116 54 1 10 125 33 147 1.21e-38 141
MS.gene37628.t1 AT5G06100 52.586 116 54 1 10 125 33 147 1.21e-38 141
MS.gene37628.t1 AT5G06100 52.586 116 54 1 10 125 33 147 1.21e-38 141
MS.gene37628.t1 AT5G06100 52.586 116 54 1 10 125 33 147 1.21e-38 141
MS.gene37628.t1 AT4G26930 45.324 139 71 2 10 148 20 153 2.78e-38 138
MS.gene37628.t1 AT4G09460 44.667 150 79 3 7 153 10 158 4.82e-38 134
MS.gene37628.t1 AT5G56110 52.137 117 54 2 9 124 12 127 8.57e-38 135
MS.gene37628.t1 AT4G01680 44.966 149 74 4 1 142 1 148 1.69e-36 130
MS.gene37628.t1 AT1G35515 50.435 115 55 2 7 120 10 123 2.66e-36 128
MS.gene37628.t1 AT3G12720 49.167 120 59 2 9 127 22 140 4.60e-36 130
MS.gene37628.t1 AT5G26660 50.400 125 60 2 10 133 13 136 4.61e-36 131
MS.gene37628.t1 AT2G26950 50.435 115 56 1 11 125 18 131 5.13e-36 132
MS.gene37628.t1 AT1G57560 46.853 143 70 3 10 147 13 154 8.62e-36 129
MS.gene37628.t1 AT4G34990 46.377 138 70 3 8 144 11 145 1.33e-35 128
MS.gene37628.t1 AT4G21440 52.679 112 51 2 10 120 13 123 1.40e-35 130
MS.gene37628.t1 AT4G01680 46.715 137 68 3 10 142 13 148 1.52e-35 130
MS.gene37628.t1 AT1G57560 41.667 180 92 5 10 180 13 188 1.71e-35 129
MS.gene37628.t1 AT5G54230 50.877 114 54 2 9 121 12 124 2.29e-35 129
MS.gene37628.t1 AT1G22640 49.167 120 59 2 7 125 10 128 2.43e-35 127
MS.gene37628.t1 AT1G09540 53.571 112 50 2 10 120 13 123 4.20e-35 129
MS.gene37628.t1 AT3G61250 49.107 112 55 2 10 120 13 123 4.38e-35 127
MS.gene37628.t1 AT3G27810 50.893 112 54 1 5 116 16 126 4.84e-35 125
MS.gene37628.t1 AT1G18570 49.138 116 57 2 10 124 14 128 7.16e-35 128
MS.gene37628.t1 AT5G65230 48.438 128 64 2 3 129 6 132 7.86e-35 127
MS.gene37628.t1 AT4G28110 51.754 114 53 2 9 121 12 124 9.37e-35 126
MS.gene37628.t1 AT5G10280 49.167 120 59 2 10 128 13 131 1.34e-34 127
MS.gene37628.t1 AT5G40350 51.887 106 50 1 7 112 15 119 1.34e-34 124
MS.gene37628.t1 AT4G05100 53.097 113 51 2 10 121 14 125 2.36e-34 126
MS.gene37628.t1 AT5G16770 46.667 120 62 2 10 128 13 131 4.15e-34 125
MS.gene37628.t1 AT5G16770 46.667 120 62 2 10 128 13 131 4.15e-34 125
MS.gene37628.t1 AT5G16770 46.667 120 62 2 10 128 13 131 8.26e-34 125
MS.gene37628.t1 AT5G16770 46.667 120 62 2 10 128 13 131 8.26e-34 125
MS.gene37628.t1 AT2G16720 42.857 133 74 2 8 139 11 142 1.07e-33 123
MS.gene37628.t1 AT4G37780 51.786 112 50 3 9 117 12 122 1.56e-33 124
MS.gene37628.t1 AT3G23250 50.000 106 51 2 10 114 13 117 1.60e-33 123
MS.gene37628.t1 AT1G74080 46.825 126 65 2 10 134 13 137 1.78e-33 124
MS.gene37628.t1 AT5G15310 45.600 125 66 2 10 133 13 136 2.07e-33 122
MS.gene37628.t1 AT3G49690 55.140 107 46 2 7 112 10 115 2.11e-33 123
MS.gene37628.t1 AT3G01140 42.963 135 75 2 7 140 10 143 3.58e-33 124
MS.gene37628.t1 AT3G01140 42.963 135 75 2 7 140 53 186 4.27e-33 124
MS.gene37628.t1 AT5G52600 43.885 139 67 3 7 135 10 147 4.38e-33 120
MS.gene37628.t1 AT3G27920 51.456 103 49 1 10 112 15 116 4.69e-33 120
MS.gene37628.t1 AT5G15310 45.600 125 66 2 10 133 13 136 5.88e-33 122
MS.gene37628.t1 AT5G15310 45.600 125 66 2 10 133 13 136 6.21e-33 122
MS.gene37628.t1 AT5G16600 47.692 130 64 3 10 138 13 139 7.86e-33 122
MS.gene37628.t1 AT5G14750 51.515 99 47 1 10 108 17 114 8.39e-33 119
MS.gene37628.t1 AT5G12870 52.336 107 50 1 10 116 19 124 8.85e-33 121
MS.gene37628.t1 AT5G61420 46.552 116 60 2 10 124 13 127 9.59e-33 123
MS.gene37628.t1 AT3G02940 45.833 120 63 2 10 128 13 131 1.07e-32 122
MS.gene37628.t1 AT1G56160 50.962 104 50 1 9 112 14 116 1.30e-32 121
MS.gene37628.t1 AT3G01530 52.475 101 47 1 9 109 25 124 1.42e-32 119
MS.gene37628.t1 AT4G17785 50.000 114 55 2 9 121 13 125 1.69e-32 122
MS.gene37628.t1 AT4G17785 50.000 114 55 2 9 121 13 125 1.72e-32 122
MS.gene37628.t1 AT3G02940 45.833 120 63 2 10 128 13 131 2.14e-32 121
MS.gene37628.t1 AT3G02940 45.833 120 63 2 10 128 13 131 2.14e-32 121
MS.gene37628.t1 AT3G08500 50.485 103 50 1 10 112 31 132 2.35e-32 121
MS.gene37628.t1 AT5G65790 55.140 107 46 2 7 112 10 115 2.54e-32 122
MS.gene37628.t1 AT3G13890 50.000 104 51 1 9 112 12 114 2.62e-32 122
MS.gene37628.t1 AT1G79180 42.759 145 75 3 9 146 14 157 2.81e-32 120
MS.gene37628.t1 AT5G40330 48.544 103 52 1 10 112 13 114 2.85e-32 118
MS.gene37628.t1 AT4G01680 42.953 149 68 4 10 142 13 160 2.91e-32 121
MS.gene37628.t1 AT5G07690 47.414 116 59 2 10 124 13 127 4.51e-32 120
MS.gene37628.t1 AT1G16490 50.000 104 51 1 9 112 14 116 4.70e-32 119
MS.gene37628.t1 AT5G07700 46.552 116 60 2 10 124 13 127 5.19e-32 120
MS.gene37628.t1 AT5G07700 46.552 116 60 2 10 124 13 127 5.19e-32 120
MS.gene37628.t1 AT3G12820 48.649 111 55 2 7 116 12 121 5.71e-32 118
MS.gene37628.t1 AT5G57620 53.571 112 49 3 7 116 10 120 6.96e-32 120
MS.gene37628.t1 AT1G34670 49.558 113 55 2 10 121 13 124 7.73e-32 120
MS.gene37628.t1 AT1G66230 46.825 126 61 3 10 130 13 137 8.90e-32 119
MS.gene37628.t1 AT1G74430 44.248 113 61 2 10 121 13 124 9.40e-32 118
MS.gene37628.t1 AT5G14340 46.552 116 60 2 10 124 25 139 1.47e-31 118
MS.gene37628.t1 AT3G28470 52.000 100 47 1 9 108 12 110 1.49e-31 119
MS.gene37628.t1 AT3G13540 40.000 135 72 3 10 136 24 157 1.74e-31 117
MS.gene37628.t1 AT1G68320 46.729 107 56 1 10 116 20 125 1.84e-31 118
MS.gene37628.t1 AT5G60890 46.552 116 60 2 10 124 13 127 2.04e-31 118
MS.gene37628.t1 AT4G22680 42.208 154 83 4 9 158 12 163 2.06e-31 117
MS.gene37628.t1 AT2G31180 44.348 115 63 1 9 123 12 125 2.34e-31 117
MS.gene37628.t1 AT5G23000 53.333 105 47 2 9 112 12 115 2.59e-31 118
MS.gene37628.t1 AT1G48000 48.113 106 54 1 10 115 33 137 2.62e-31 116
MS.gene37628.t1 AT1G18710 42.982 114 63 2 10 122 13 125 2.80e-31 117
MS.gene37628.t1 AT1G06180 50.485 103 50 1 10 112 13 114 2.94e-31 116
MS.gene37628.t1 AT1G63910 47.826 115 58 2 2 115 5 118 3.22e-31 119
MS.gene37628.t1 AT2G47190 47.664 107 55 1 9 115 20 125 3.62e-31 117
MS.gene37628.t1 AT5G62320 44.118 136 67 3 10 137 14 148 7.99e-31 115
MS.gene37628.t1 AT1G25340 45.455 110 59 1 7 116 16 124 8.98e-31 116
MS.gene37628.t1 AT2G36890 47.009 117 60 2 7 122 10 125 1.94e-30 115
MS.gene37628.t1 AT1G74650 47.115 104 54 1 9 112 12 114 2.82e-30 115
MS.gene37628.t1 AT3G28910 49.074 108 53 2 9 115 12 118 3.26e-30 115
MS.gene37628.t1 AT2G36890 47.009 117 60 2 7 122 51 166 3.67e-30 115
MS.gene37628.t1 AT4G13480 50.000 106 52 1 10 115 7 111 5.41e-30 113
MS.gene37628.t1 AT3G47600 48.148 108 54 2 9 115 12 118 5.97e-30 115
MS.gene37628.t1 AT1G08810 49.533 107 52 2 10 115 13 118 6.87e-30 114
MS.gene37628.t1 AT3G60460 47.222 108 55 2 9 115 11 117 1.02e-29 114
MS.gene37628.t1 AT5G62470 48.148 108 54 2 9 115 12 118 1.45e-29 114
MS.gene37628.t1 AT5G59780 47.368 114 56 2 10 120 9 121 1.60e-29 111
MS.gene37628.t1 AT3G24310 48.113 106 54 1 10 115 19 123 1.78e-29 112
MS.gene37628.t1 AT2G47460 49.524 105 51 2 10 113 13 116 2.07e-29 114
MS.gene37628.t1 AT3G13890 46.018 113 51 2 9 112 12 123 2.30e-29 114
MS.gene37628.t1 AT3G30210 47.170 106 55 1 10 115 28 132 4.72e-29 111
MS.gene37628.t1 AT3G62610 48.571 105 52 2 10 113 13 116 5.49e-29 112
MS.gene37628.t1 AT3G46130 46.491 114 57 2 10 120 10 122 5.68e-29 110
MS.gene37628.t1 AT5G49330 47.475 99 51 1 10 108 13 110 1.51e-28 111
MS.gene37628.t1 AT3G53200 48.544 103 52 1 10 112 10 111 2.65e-28 108
MS.gene37628.t1 AT5G62470 48.148 108 53 3 9 115 12 117 2.83e-28 110
MS.gene37628.t1 AT5G35550 46.078 102 54 1 11 112 16 116 3.07e-28 108
MS.gene37628.t1 AT4G12350 47.788 113 57 2 9 120 12 123 3.75e-28 109
MS.gene37628.t1 AT4G18770 50.000 102 49 2 11 112 217 316 2.39e-27 109
MS.gene37628.t1 AT1G79180 35.393 178 74 4 9 146 14 190 6.74e-27 106
MS.gene37628.t1 AT3G06490 48.598 107 54 1 10 116 20 125 6.93e-27 106
MS.gene37628.t1 AT1G25340 42.727 110 57 2 7 116 16 119 1.36e-26 105
MS.gene37628.t1 AT1G25340 44.340 106 53 2 7 112 16 115 1.78e-26 105
MS.gene37628.t1 AT5G40360 48.544 103 51 2 11 113 158 258 2.30e-26 105
MS.gene37628.t1 AT1G56650 39.844 128 67 2 4 122 3 129 3.00e-26 103
MS.gene37628.t1 AT4G25560 46.602 103 54 1 10 112 11 112 3.69e-26 103
MS.gene37628.t1 AT5G26660 50.538 93 44 2 42 133 14 105 4.10e-26 104
MS.gene37628.t1 AT5G49620 46.296 108 57 1 9 116 26 132 4.71e-26 104
MS.gene37628.t1 AT5G52260 47.788 113 55 2 10 122 13 121 5.01e-26 103
MS.gene37628.t1 AT3G27785 43.363 113 62 2 4 116 182 292 1.20e-25 105
MS.gene37628.t1 AT3G48920 44.660 103 56 1 10 112 19 120 1.95e-25 101
MS.gene37628.t1 AT1G66370 44.444 99 54 1 10 108 9 106 1.96e-25 101
MS.gene37628.t1 AT1G66380 44.762 105 57 1 4 108 3 106 3.07e-25 97.8
MS.gene37628.t1 AT5G58850 48.624 109 52 3 5 112 99 204 1.04e-24 102
MS.gene37628.t1 AT5G49620 42.149 121 57 1 9 116 26 146 1.80e-24 100
MS.gene37628.t1 AT1G66390 43.119 109 61 1 4 112 3 110 3.16e-24 98.2
MS.gene37628.t1 AT3G50060 44.954 109 58 2 11 119 6 112 3.34e-24 99.0
MS.gene37628.t1 AT4G37260 46.364 110 56 3 11 119 13 120 1.16e-23 97.8
MS.gene37628.t1 AT2G25230 44.444 126 60 5 4 122 14 136 4.10e-23 94.7
MS.gene37628.t1 AT5G11050 47.573 103 50 3 11 112 105 204 4.54e-23 97.8
MS.gene37628.t1 AT2G23290 47.573 103 51 3 11 112 13 113 6.31e-23 95.9
MS.gene37628.t1 AT5G40350 37.209 129 75 4 40 163 3 130 6.97e-23 92.4
MS.gene37628.t1 AT1G17950 30.964 197 121 7 11 201 5 192 7.69e-23 94.4
MS.gene37628.t1 AT3G27810 53.333 75 34 1 42 116 4 77 7.97e-23 92.4
MS.gene37628.t1 AT5G67300 48.544 103 50 3 11 112 6 106 7.98e-23 95.5
MS.gene37628.t1 AT3G55730 46.078 102 53 2 11 112 56 155 9.75e-23 96.7
MS.gene37628.t1 AT3G09230 44.118 102 55 2 11 112 55 154 2.59e-22 95.1
MS.gene37628.t1 AT3G53200 56.338 71 30 1 42 112 9 78 3.27e-22 91.7
MS.gene37628.t1 AT2G39880 48.039 102 51 2 11 112 50 149 5.37e-22 94.0
MS.gene37628.t1 AT5G17800 38.060 134 78 3 11 141 93 224 8.34e-22 92.8
MS.gene37628.t1 AT1G69560 42.453 106 57 3 4 108 116 218 9.90e-22 93.2
MS.gene37628.t1 AT1G69560 40.952 105 60 2 4 108 100 202 9.99e-22 92.8
MS.gene37628.t1 AT4G32730 41.880 117 65 3 11 126 87 201 2.81e-21 93.6
MS.gene37628.t1 AT4G32730 34.906 106 68 1 2 107 26 130 4.89e-15 75.1
MS.gene37628.t1 AT4G32730 44.118 102 55 2 11 112 87 186 2.82e-21 93.6
MS.gene37628.t1 AT4G32730 34.906 106 68 1 2 107 26 130 4.40e-15 75.5
MS.gene37628.t1 AT4G32730 44.118 102 55 2 11 112 87 186 2.82e-21 93.6
MS.gene37628.t1 AT4G32730 34.906 106 68 1 2 107 26 130 4.40e-15 75.5
MS.gene37628.t1 AT4G32730 44.118 102 55 2 11 112 87 186 2.82e-21 93.6
MS.gene37628.t1 AT4G32730 34.906 106 68 1 2 107 26 130 4.40e-15 75.5
MS.gene37628.t1 AT4G32730 44.118 102 55 2 11 112 87 186 2.82e-21 93.6
MS.gene37628.t1 AT4G32730 34.906 106 68 1 2 107 26 130 4.40e-15 75.5
MS.gene37628.t1 AT1G73410 35.714 168 88 6 11 164 6 167 4.39e-21 88.6
MS.gene37628.t1 AT3G46130 50.000 84 38 2 40 120 8 90 5.13e-21 89.0
MS.gene37628.t1 AT4G33450 39.623 106 59 3 10 112 18 121 5.94e-21 89.4
MS.gene37628.t1 AT3G12820 52.703 74 33 2 44 116 1 73 6.22e-21 87.8
MS.gene37628.t1 AT5G59780 51.220 82 36 2 42 120 20 100 1.19e-20 87.8
MS.gene37628.t1 AT1G73410 35.714 168 88 6 11 164 6 167 1.20e-20 88.2
MS.gene37628.t1 AT3G46130 51.220 82 36 2 42 120 20 100 1.76e-20 87.8
MS.gene37628.t1 AT5G14750 49.275 69 34 1 44 112 17 84 5.56e-20 84.7
MS.gene37628.t1 AT1G26780 42.424 99 53 3 11 108 98 193 5.69e-20 87.0
MS.gene37628.t1 AT3G09370 30.457 197 123 6 11 199 143 333 6.00e-20 89.4
MS.gene37628.t1 AT3G09370 39.175 97 58 1 11 107 91 186 2.20e-15 75.9
MS.gene37628.t1 AT5G11510 40.196 102 59 2 11 112 81 180 6.45e-20 89.4
MS.gene37628.t1 AT5G11510 33.019 106 70 1 2 107 20 124 7.26e-14 71.6
MS.gene37628.t1 AT5G11510 40.196 102 59 2 11 112 81 180 6.45e-20 89.4
MS.gene37628.t1 AT5G11510 33.019 106 70 1 2 107 20 124 7.26e-14 71.6
MS.gene37628.t1 AT5G11510 40.196 102 59 2 11 112 81 180 6.45e-20 89.4
MS.gene37628.t1 AT5G11510 33.019 106 70 1 2 107 20 124 7.26e-14 71.6
MS.gene37628.t1 AT3G09370 30.457 197 123 6 11 199 135 325 6.74e-20 89.0
MS.gene37628.t1 AT3G09370 39.175 97 58 1 11 107 83 178 2.11e-15 75.9
MS.gene37628.t1 AT3G09370 30.457 197 123 6 11 199 130 320 7.34e-20 89.0
MS.gene37628.t1 AT3G09370 39.175 97 58 1 11 107 78 173 2.42e-15 75.9
MS.gene37628.t1 AT5G11510 40.196 102 59 2 11 112 81 180 7.48e-20 89.4
MS.gene37628.t1 AT5G11510 33.019 106 70 1 2 107 20 124 7.26e-14 71.6
MS.gene37628.t1 AT5G11510 40.196 102 59 2 11 112 81 180 7.55e-20 89.4
MS.gene37628.t1 AT5G11510 33.019 106 70 1 2 107 20 124 7.75e-14 71.6
MS.gene37628.t1 AT1G26780 40.952 105 57 3 11 112 98 200 7.66e-20 87.8
MS.gene37628.t1 AT2G37630 42.857 119 64 3 14 130 7 123 9.26e-20 87.8
MS.gene37628.t1 AT5G02320 41.905 105 58 3 11 114 127 229 1.11e-19 88.6
MS.gene37628.t1 AT5G02320 38.144 97 59 1 11 107 75 170 8.24e-15 74.3
MS.gene37628.t1 AT5G02320 41.905 105 58 3 11 114 127 229 1.11e-19 88.6
MS.gene37628.t1 AT5G02320 38.144 97 59 1 11 107 75 170 8.24e-15 74.3
MS.gene37628.t1 AT5G02320 41.905 105 58 3 11 114 67 169 1.37e-19 88.2
MS.gene37628.t1 AT5G02320 38.144 97 59 1 11 107 15 110 1.00e-14 73.9
MS.gene37628.t1 AT5G35550 50.704 71 34 1 42 112 50 119 1.32e-18 83.2
MS.gene37628.t1 AT3G29020 38.393 112 64 3 4 112 58 167 1.47e-18 82.4
MS.gene37628.t1 AT3G29020 36.752 117 71 3 4 119 60 174 1.66e-18 83.6
MS.gene37628.t1 AT3G47600 49.333 75 36 2 42 115 39 112 2.19e-18 83.6
MS.gene37628.t1 AT5G40430 39.669 121 63 5 3 117 41 157 3.65e-18 81.6
MS.gene37628.t1 AT4G00540 40.909 110 59 4 10 115 102 209 3.88e-18 83.6
MS.gene37628.t1 AT4G00540 40.909 110 59 4 10 115 100 207 4.51e-18 83.6
MS.gene37628.t1 AT1G66380 47.761 67 35 0 5 71 4 70 3.18e-16 73.2
MS.gene37628.t1 AT1G66380 50.000 68 33 1 41 108 7 73 4.39e-16 72.4
MS.gene37628.t1 AT3G18100 40.816 98 56 2 9 106 544 639 4.28e-15 75.1
MS.gene37628.t1 AT3G18100 40.816 98 56 2 9 106 496 591 4.75e-15 75.1
MS.gene37628.t1 AT3G18100 40.816 98 56 2 9 106 383 478 6.58e-15 74.7
MS.gene37628.t1 AT3G18100 40.816 98 56 2 9 106 331 426 6.89e-15 74.7
MS.gene37628.t1 AT1G14350 35.922 103 64 2 13 115 27 127 2.30e-14 72.8
MS.gene37628.t1 AT1G14350 35.922 103 64 2 13 115 27 127 2.30e-14 72.8
MS.gene37628.t1 AT1G22640 46.479 71 36 2 56 125 2 71 2.87e-14 70.1
MS.gene37628.t1 AT1G18960 33.913 115 71 4 5 118 4 114 6.97e-14 70.5
MS.gene37628.t1 AT2G02820 34.951 103 65 2 13 115 32 132 1.40e-13 70.5
MS.gene37628.t1 AT2G02820 34.951 103 65 2 13 115 32 132 1.54e-13 70.5
MS.gene37628.t1 AT2G02820 36.957 92 56 2 13 104 32 121 3.76e-13 68.6
MS.gene37628.t1 AT5G39700 36.364 99 61 2 10 108 55 151 8.09e-13 65.9

Find 50 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATACCTCGTTCCAATTTC+TGG 0.107867 5.3:+70781648 None:intergenic
TAATATTTCATCTTCTTCTT+TGG 0.201233 5.3:+70781696 None:intergenic
GATTTCAGGGGTAGCATTAT+TGG 0.227047 5.3:-70781115 MS.gene37628:CDS
CCTACAACCAGATGTGAAAA+AGG 0.249095 5.3:-70781569 MS.gene37628:CDS
ATGTATTGACTTCAGTAATT+TGG 0.259715 5.3:-70780903 MS.gene37628:CDS
TCAGTATCATGGTGACTTTA+TGG 0.269513 5.3:-70781011 MS.gene37628:CDS
ATAATGACATCAAGAACTTT+TGG 0.308735 5.3:-70781321 MS.gene37628:CDS
CTTGTGAATCCTCAACTTGT+TGG 0.318952 5.3:+70781215 None:intergenic
AAAACCATGGAACCAGAAAT+TGG 0.371902 5.3:-70781660 MS.gene37628:CDS
AAACCTCCTTGATGACTTCA+TGG 0.396227 5.3:-70780936 MS.gene37628:CDS
ATGTCATTATCGCTTCTTCC+CGG 0.399929 5.3:+70781334 None:intergenic
CGTTCCAATTTCTGGTTCCA+TGG 0.417198 5.3:+70781656 None:intergenic
TCATCCGGTTCCATCTTGTC+AGG 0.436579 5.3:+70781253 None:intergenic
TCCTCAAATTCCACCACCTA+TGG 0.442042 5.3:-70781038 MS.gene37628:CDS
GGATAGTCACCAAGCATCAT+AGG 0.444307 5.3:+70781058 None:intergenic
TGAAATATTAAAAGCATATG+TGG 0.459693 5.3:-70781683 MS.gene37628:CDS
TCCATAGGTGGTGGAATTTG+AGG 0.460831 5.3:+70781037 None:intergenic
AAAAGTATGGTGAATTCAAA+TGG 0.466521 5.3:-70781501 MS.gene37628:CDS
CTACTATTCAACTCATCATC+CGG 0.471736 5.3:+70781238 None:intergenic
TGGAACTTCTCATATACCTA+TGG 0.477216 5.3:-70781095 MS.gene37628:CDS
CTTCCTTCACCTATGATGCT+TGG 0.481674 5.3:-70781067 MS.gene37628:CDS
GTCACCCTTCCCTGACAAGA+TGG 0.495250 5.3:-70781263 MS.gene37628:CDS
GTAAAAGTTGTCGTCTAAGA+TGG 0.497716 5.3:-70781600 MS.gene37628:CDS
TATTGACTTCAGTAATTTGG+AGG 0.499792 5.3:-70780900 MS.gene37628:CDS
CGGTTCCATCTTGTCAGGGA+AGG 0.508810 5.3:+70781258 None:intergenic
CTTCCCTGACAAGATGGAAC+CGG 0.509188 5.3:-70781257 MS.gene37628:CDS
CAAATGGTCTAAGCTGGCTC+AGG 0.526373 5.3:-70781485 MS.gene37628:CDS
TTGGAGGACGATGTTGAAGC+CGG 0.528092 5.3:-70780884 MS.gene37628:CDS
TACTGAGTCTCCATAGGTGG+TGG 0.534844 5.3:+70781028 None:intergenic
GAATAGTAGCCAACAAGTTG+AGG 0.541704 5.3:-70781224 MS.gene37628:CDS
TGAATTCAAATGGTCTAAGC+TGG 0.550324 5.3:-70781491 MS.gene37628:CDS
CATCATGTCTTCATCATCAT+CGG 0.555000 5.3:-70781743 None:intergenic
ATGGTCTAAGCTGGCTCAGG+AGG 0.563124 5.3:-70781482 MS.gene37628:intron
AGCATCATAGGTGAAGGAAG+TGG 0.575321 5.3:+70781070 None:intergenic
CCTATGGAGACTCAGTATCA+TGG 0.585538 5.3:-70781022 MS.gene37628:CDS
CCATGATACTGAGTCTCCAT+AGG 0.586617 5.3:+70781022 None:intergenic
GGTGAAGGAAGTGGAGCCAT+AGG 0.590422 5.3:+70781079 None:intergenic
ATGGATCCATGAAGTCATCA+AGG 0.595005 5.3:+70780930 None:intergenic
TCACCAAGCATCATAGGTGA+AGG 0.597667 5.3:+70781064 None:intergenic
GGTTCCATCTTGTCAGGGAA+GGG 0.605286 5.3:+70781259 None:intergenic
AAAAGAAAACTTGAAAAGCG+TGG 0.617466 5.3:-70781289 MS.gene37628:CDS
CTGAAGTCAATACATAGACA+TGG 0.618549 5.3:+70780911 None:intergenic
AAAGCATATGTGGAAAACCA+TGG 0.619332 5.3:-70781673 MS.gene37628:CDS
CATCCGGTTCCATCTTGTCA+GGG 0.638065 5.3:+70781254 None:intergenic
GAGGACGATGTTGAAGCCGG+CGG 0.660817 5.3:-70780881 MS.gene37628:CDS
ACTGTCAAATAAACGACCGC+CGG 0.667707 5.3:+70780865 None:intergenic
TGATACTGAGTCTCCATAGG+TGG 0.687296 5.3:+70781025 None:intergenic
AATGCGGGGCTTATACGTTG+CGG 0.693414 5.3:-70781622 MS.gene37628:CDS
GATCCATGAAGTCATCAAGG+AGG 0.752147 5.3:+70780933 None:intergenic
TGGAACCAGAAATTGGAACG+AGG 0.771577 5.3:-70781653 MS.gene37628:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTCTAAATTTCAATTG+TGG + chr5.3:70781411-70781430 None:intergenic 15.0%
!! TAATATTTCATCTTCTTCTT+TGG + chr5.3:70780890-70780909 None:intergenic 20.0%
!! TTTATCTCATCAAAAATTGA+TGG + chr5.3:70781435-70781454 None:intergenic 20.0%
!!! ATGAAAAACTTTTAGATTTC+AGG - chr5.3:70781454-70781473 MS.gene37628:intron 20.0%
!!! TGAAAAACTTTTAGATTTCA+GGG - chr5.3:70781455-70781474 MS.gene37628:intron 20.0%
!!! TGAAATATTAAAAGCATATG+TGG - chr5.3:70780900-70780919 MS.gene37628:CDS 20.0%
!!! TTTGAGTTCTATAAAAAGTA+TGG - chr5.3:70781069-70781088 MS.gene37628:CDS 20.0%
! AACAAAATAATCAACACAAG+TGG + chr5.3:70781183-70781202 None:intergenic 25.0%
!! AAAAGTATGGTGAATTCAAA+TGG - chr5.3:70781082-70781101 MS.gene37628:CDS 25.0%
!! ATAATGACATCAAGAACTTT+TGG - chr5.3:70781262-70781281 MS.gene37628:CDS 25.0%
!! GAAAAACTTTTAGATTTCAG+GGG - chr5.3:70781456-70781475 MS.gene37628:intron 25.0%
!!! ATGTATTGACTTCAGTAATT+TGG - chr5.3:70781680-70781699 MS.gene37628:CDS 25.0%
!!! CTTTTTTCTTCTTCACTAAA+TGG + chr5.3:70781042-70781061 None:intergenic 25.0%
AAAAGAAAACTTGAAAAGCG+TGG - chr5.3:70781294-70781313 MS.gene37628:CDS 30.0%
CAAGTGGTGAATATTATAGA+AGG + chr5.3:70781167-70781186 None:intergenic 30.0%
CCTATACTAAAAAAGGAACA+TGG - chr5.3:70780863-70780882 MS.gene37628:CDS 30.0%
! ACTTTATGGATCCAGATTTT+TGG - chr5.3:70781586-70781605 MS.gene37628:CDS 30.0%
!! TATTGACTTCAGTAATTTGG+AGG - chr5.3:70781683-70781702 MS.gene37628:CDS 30.0%
!!! CCATGTTCCTTTTTTAGTAT+AGG + chr5.3:70780866-70780885 None:intergenic 30.0%
AAAACCATGGAACCAGAAAT+TGG - chr5.3:70780923-70780942 MS.gene37628:CDS 35.0%
AAAGCATATGTGGAAAACCA+TGG - chr5.3:70780910-70780929 MS.gene37628:CDS 35.0%
CTACAACCAGATGTGAAAAA+GGG - chr5.3:70781015-70781034 MS.gene37628:CDS 35.0%
CTACTATTCAACTCATCATC+CGG + chr5.3:70781348-70781367 None:intergenic 35.0%
CTGAAGTCAATACATAGACA+TGG + chr5.3:70781675-70781694 None:intergenic 35.0%
CTGTTGTGAAACCAAAAATC+TGG + chr5.3:70781600-70781619 None:intergenic 35.0%
GTAAAAGTTGTCGTCTAAGA+TGG - chr5.3:70780983-70781002 MS.gene37628:CDS 35.0%
TCAGTATCATGGTGACTTTA+TGG - chr5.3:70781572-70781591 MS.gene37628:CDS 35.0%
TCATCGGCCTATACTAAAAA+AGG - chr5.3:70780856-70780875 MS.gene37628:CDS 35.0%
TGAATTCAAATGGTCTAAGC+TGG - chr5.3:70781092-70781111 MS.gene37628:CDS 35.0%
TGGAACTTCTCATATACCTA+TGG - chr5.3:70781488-70781507 MS.gene37628:CDS 35.0%
! AACGAGGTATCAAAAAATGC+GGG - chr5.3:70780946-70780965 MS.gene37628:CDS 35.0%
! GAACGAGGTATCAAAAAATG+CGG - chr5.3:70780945-70780964 MS.gene37628:CDS 35.0%
! GTTCTTTTTGTGTCAGTTAC+CGG - chr5.3:70781230-70781249 MS.gene37628:CDS 35.0%
! TTCTTTTTGTGTCAGTTACC+GGG - chr5.3:70781231-70781250 MS.gene37628:CDS 35.0%
ATGGATCCATGAAGTCATCA+AGG + chr5.3:70781656-70781675 None:intergenic 40.0%
ATGTCATTATCGCTTCTTCC+CGG + chr5.3:70781252-70781271 None:intergenic 40.0%
CCTACAACCAGATGTGAAAA+AGG - chr5.3:70781014-70781033 MS.gene37628:CDS 40.0%
CTTGTGAATCCTCAACTTGT+TGG + chr5.3:70781371-70781390 None:intergenic 40.0%
GAATAGTAGCCAACAAGTTG+AGG - chr5.3:70781359-70781378 MS.gene37628:intron 40.0%
GATTTCAGGGGTAGCATTAT+TGG - chr5.3:70781468-70781487 MS.gene37628:intron 40.0%
TGATACCTCGTTCCAATTTC+TGG + chr5.3:70780938-70780957 None:intergenic 40.0%
! AAACCTCCTTGATGACTTCA+TGG - chr5.3:70781647-70781666 MS.gene37628:CDS 40.0%
! ACGAGGTATCAAAAAATGCG+GGG - chr5.3:70780947-70780966 MS.gene37628:CDS 40.0%
!! AATGGACCCTTTTTCACATC+TGG + chr5.3:70781024-70781043 None:intergenic 40.0%
!! CCTTTTTCACATCTGGTTGT+AGG + chr5.3:70781017-70781036 None:intergenic 40.0%
ACTGTCAAATAAACGACCGC+CGG + chr5.3:70781721-70781740 None:intergenic 45.0%
AGCATCATAGGTGAAGGAAG+TGG + chr5.3:70781516-70781535 None:intergenic 45.0%
CCATGATACTGAGTCTCCAT+AGG + chr5.3:70781564-70781583 None:intergenic 45.0%
CCTATGGAGACTCAGTATCA+TGG - chr5.3:70781561-70781580 MS.gene37628:CDS 45.0%
CTTCCTTCACCTATGATGCT+TGG - chr5.3:70781516-70781535 MS.gene37628:CDS 45.0%
GATCCATGAAGTCATCAAGG+AGG + chr5.3:70781653-70781672 None:intergenic 45.0%
GGATAGTCACCAAGCATCAT+AGG + chr5.3:70781528-70781547 None:intergenic 45.0%
TCACCAAGCATCATAGGTGA+AGG + chr5.3:70781522-70781541 None:intergenic 45.0%
TCCTCAAATTCCACCACCTA+TGG - chr5.3:70781545-70781564 MS.gene37628:CDS 45.0%
TGATACTGAGTCTCCATAGG+TGG + chr5.3:70781561-70781580 None:intergenic 45.0%
TGGAACCAGAAATTGGAACG+AGG - chr5.3:70780930-70780949 MS.gene37628:CDS 45.0%
!! CGTTCCAATTTCTGGTTCCA+TGG + chr5.3:70780930-70780949 None:intergenic 45.0%
!! TCCATAGGTGGTGGAATTTG+AGG + chr5.3:70781549-70781568 None:intergenic 45.0%
AATGCGGGGCTTATACGTTG+CGG - chr5.3:70780961-70780980 MS.gene37628:CDS 50.0%
CATCCGGTTCCATCTTGTCA+GGG + chr5.3:70781332-70781351 None:intergenic 50.0%
CTTCCCTGACAAGATGGAAC+CGG - chr5.3:70781326-70781345 MS.gene37628:CDS 50.0%
GGTTCCATCTTGTCAGGGAA+GGG + chr5.3:70781327-70781346 None:intergenic 50.0%
TACTGAGTCTCCATAGGTGG+TGG + chr5.3:70781558-70781577 None:intergenic 50.0%
TCATCCGGTTCCATCTTGTC+AGG + chr5.3:70781333-70781352 None:intergenic 50.0%
TTGGAGGACGATGTTGAAGC+CGG - chr5.3:70781699-70781718 MS.gene37628:CDS 50.0%
! CAAATGGTCTAAGCTGGCTC+AGG - chr5.3:70781098-70781117 MS.gene37628:CDS 50.0%
CGGTTCCATCTTGTCAGGGA+AGG + chr5.3:70781328-70781347 None:intergenic 55.0%
GGTGAAGGAAGTGGAGCCAT+AGG + chr5.3:70781507-70781526 None:intergenic 55.0%
GTCACCCTTCCCTGACAAGA+TGG - chr5.3:70781320-70781339 MS.gene37628:CDS 55.0%
! ATGGTCTAAGCTGGCTCAGG+AGG - chr5.3:70781101-70781120 MS.gene37628:CDS 55.0%
GAGGACGATGTTGAAGCCGG+CGG - chr5.3:70781702-70781721 MS.gene37628:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 70780844 70781761 70780844 ID=MS.gene37628
chr5.3 mRNA 70780844 70781761 70780844 ID=MS.gene37628.t1;Parent=MS.gene37628
chr5.3 exon 70781483 70781761 70781483 ID=MS.gene37628.t1.exon1;Parent=MS.gene37628.t1
chr5.3 CDS 70781483 70781761 70781483 ID=cds.MS.gene37628.t1;Parent=MS.gene37628.t1
chr5.3 exon 70780844 70781359 70780844 ID=MS.gene37628.t1.exon2;Parent=MS.gene37628.t1
chr5.3 CDS 70780844 70781359 70780844 ID=cds.MS.gene37628.t1;Parent=MS.gene37628.t1
Gene Sequence

>MS.gene37628

ATGTCTTCATCATCATCGGCCTATACTAAAAAAGGAACATGGTCCAAAGAAGAAGATGAAATATTAAAAGCATATGTGGAAAACCATGGAACCAGAAATTGGAACGAGGTATCAAAAAATGCGGGGCTTATACGTTGCGGTAAAAGTTGTCGTCTAAGATGGTATAATCACCTACAACCAGATGTGAAAAAGGGTCCATTTAGTGAAGAAGAAAAAAGAAAAGTTTTTGAGTTCTATAAAAAGTATGGTGAATTCAAATGGTCTAAGCTGGCTCAGGAGGTAACTTCTTTTACTTTCTTTAATTTGAAATATTGATCTATCCTTCTATAATATTCACCACTTGTGTTGATTATTTTGTTGATCATGTCATTATATAATTTGTATTTGTTCTTTTTGTGTCAGTTACCGGGAAGAAGCGATAATGACATCAAGAACTTTTGGAATGCGAGAAAAAGAAAACTTGAAAAGCGTGGCTTGTCACCCTTCCCTGACAAGATGGAACCGGATGATGAGTTGAATAGTAGCCAACAAGTTGAGGATTCACAAGAAGATGAATTTAATATACCACAATTGAAATTTAGAAAATATCCATCAATTTTTGATGAGATAAATGAAAAACTTTTAGATTTCAGGGGTAGCATTATTGGAACTTCTCATATACCTATGGCTCCACTTCCTTCACCTATGATGCTTGGTGACTATCCTCAAATTCCACCACCTATGGAGACTCAGTATCATGGTGACTTTATGGATCCAGATTTTTGGTTTCACAACAGTTCATTAGACACTAACGATGCTGAAGCAAACCTCCTTGATGACTTCATGGATCCATGTCTATGTATTGACTTCAGTAATTTGGAGGACGATGTTGAAGCCGGCGGTCGTTTATTTGACAGTAACTTGCATGACAAGATATAA
Protein sequence

>MS.gene37628.t1

MSSSSSAYTKKGTWSKEEDEILKAYVENHGTRNWNEVSKNAGLIRCGKSCRLRWYNHLQPDVKKGPFSEEEKRKVFEFYKKYGEFKWSKLAQELPGRSDNDIKNFWNARKRKLEKRGLSPFPDKMEPDDELNSSQQVEDSQEDEFNIPQLKFRKYPSIFDEINEKLLDFRGSIIGTSHIPMAPLPSPMMLGDYPQIPPPMETQYHGDFMDPDFWFHNSSLDTNDAEANLLDDFMDPCLCIDFSNLEDDVEAGGRLFDSNLHDKI