Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37825.t1 | XP_003617086.1 | 94.6 | 625 | 24 | 1 | 1 | 625 | 1 | 615 | 0.00E+00 | 1154.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37825.t1 | O24606 | 69.7 | 511 | 135 | 7 | 2 | 508 | 1 | 495 | 1.2e-197 | 691.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37825.t1 | G7K2Y0 | 94.6 | 625 | 24 | 1 | 1 | 625 | 1 | 615 | 0.0e+00 | 1154.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene37825.t1 | TF | EIL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37825.t1 | MTR_5g087790 | 97.280 | 625 | 7 | 1 | 1 | 625 | 1 | 615 | 0.0 | 1268 |
| MS.gene37825.t1 | MTR_3g078770 | 67.125 | 654 | 156 | 21 | 1 | 623 | 2 | 627 | 0.0 | 802 |
| MS.gene37825.t1 | MTR_2g098470 | 63.961 | 308 | 100 | 4 | 35 | 333 | 24 | 329 | 1.41e-133 | 405 |
| MS.gene37825.t1 | MTR_3g087530 | 62.791 | 258 | 85 | 4 | 46 | 298 | 29 | 280 | 9.79e-110 | 337 |
| MS.gene37825.t1 | MTR_6g460640 | 38.462 | 520 | 282 | 11 | 37 | 550 | 31 | 518 | 6.33e-107 | 337 |
| MS.gene37825.t1 | MTR_6g060600 | 50.000 | 314 | 149 | 4 | 26 | 338 | 20 | 326 | 5.93e-106 | 334 |
| MS.gene37825.t1 | MTR_8g091370 | 60.227 | 264 | 97 | 4 | 39 | 298 | 12 | 271 | 3.95e-105 | 325 |
| MS.gene37825.t1 | MTR_3g010790 | 55.702 | 228 | 100 | 1 | 103 | 330 | 1 | 227 | 2.30e-87 | 281 |
| MS.gene37825.t1 | MTR_1g024420 | 44.231 | 104 | 56 | 1 | 44 | 145 | 5 | 108 | 4.35e-27 | 106 |
| MS.gene37825.t1 | MTR_7g095580 | 43.269 | 104 | 47 | 3 | 92 | 186 | 1 | 101 | 1.69e-18 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37825.t1 | AT3G20770 | 61.035 | 657 | 191 | 13 | 2 | 623 | 1 | 627 | 0.0 | 744 |
| MS.gene37825.t1 | AT2G27050 | 59.594 | 641 | 183 | 20 | 1 | 623 | 1 | 583 | 0.0 | 673 |
| MS.gene37825.t1 | AT1G73730 | 61.682 | 321 | 92 | 6 | 34 | 336 | 11 | 318 | 1.24e-131 | 397 |
| MS.gene37825.t1 | AT1G73730 | 61.682 | 321 | 92 | 6 | 34 | 336 | 23 | 330 | 1.36e-131 | 398 |
| MS.gene37825.t1 | AT5G21120 | 48.086 | 418 | 182 | 9 | 22 | 432 | 24 | 413 | 1.33e-114 | 352 |
| MS.gene37825.t1 | AT5G21120 | 48.086 | 418 | 182 | 9 | 22 | 432 | 24 | 413 | 1.33e-114 | 352 |
| MS.gene37825.t1 | AT5G21120 | 48.086 | 418 | 182 | 9 | 22 | 432 | 31 | 420 | 1.37e-114 | 353 |
| MS.gene37825.t1 | AT5G10120 | 57.818 | 275 | 109 | 4 | 28 | 298 | 4 | 275 | 2.13e-105 | 327 |
| MS.gene37825.t1 | AT5G65100 | 43.427 | 426 | 188 | 11 | 44 | 429 | 33 | 445 | 1.47e-100 | 317 |
Find 189 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGCACAAGGCTTTGTTTA+TGG | 0.190580 | 5.3:-70602379 | MS.gene37825:CDS |
| ACCTCGGTAGCATGAAAATT+AGG | 0.199653 | 5.3:+70601383 | None:intergenic |
| GGTGGAGGGCCTTGATCTTT+AGG | 0.277617 | 5.3:+70602025 | None:intergenic |
| AAGCTTTGTGGGAAAATAAC+TGG | 0.313704 | 5.3:+70601356 | None:intergenic |
| GCAGGCTGAACTGTAGAATT+AGG | 0.320347 | 5.3:+70601326 | None:intergenic |
| CCACCTTCATTCGATTTAAC+CGG | 0.323692 | 5.3:-70601293 | MS.gene37825:CDS |
| GATCTTTAGGCAAACCGATC+TGG | 0.332130 | 5.3:+70602038 | None:intergenic |
| AGGCACAAGGCTTTGTTTAT+GGG | 0.334965 | 5.3:-70602378 | MS.gene37825:CDS |
| ATCTGCTTGATACTTGGATA+TGG | 0.336300 | 5.3:+70602258 | None:intergenic |
| GTATGGTTCTTCATGTGATT+TGG | 0.348025 | 5.3:-70600949 | MS.gene37825:CDS |
| ACACACCTTGCAAGAATTAC+AGG | 0.349517 | 5.3:-70602185 | MS.gene37825:CDS |
| TCATCCTCGACCACCGAATC+TGG | 0.353514 | 5.3:+70602613 | None:intergenic |
| TGCGTTATCTGCTTGATACT+TGG | 0.353824 | 5.3:+70602252 | None:intergenic |
| AAGCCAGGTTGCGCTTTCCT+TGG | 0.356760 | 5.3:+70601865 | None:intergenic |
| AACAACAAGATGTTTCAATA+TGG | 0.364077 | 5.3:-70600863 | MS.gene37825:CDS |
| TGATGAGAAGGTTGCTGAAC+TGG | 0.365013 | 5.3:+70601623 | None:intergenic |
| CCTTTCAAGATAGGTCTTCC+AGG | 0.366977 | 5.3:-70601466 | MS.gene37825:CDS |
| TTGCATCCATCATTCTTTCC+TGG | 0.368112 | 5.3:+70602226 | None:intergenic |
| ATCTTTAGGCAAACCGATCT+GGG | 0.368749 | 5.3:+70602039 | None:intergenic |
| TACCTCCACCAGAGGATAAC+GGG | 0.368904 | 5.3:+70601786 | None:intergenic |
| AAGTCATGAGGTTTCTTGTA+TGG | 0.369753 | 5.3:+70602004 | None:intergenic |
| ATTATTGTTGTTGTTGAGGT+TGG | 0.371583 | 5.3:+70600983 | None:intergenic |
| TTGCGAATCTTGGCTATATC+AGG | 0.374628 | 5.3:+70601929 | None:intergenic |
| CCTCCACCATGGTGGCCAAC+CGG | 0.379505 | 5.3:-70602079 | MS.gene37825:CDS |
| ATCAATTCCTTCTTTAGCCT+TGG | 0.381143 | 5.3:+70602504 | None:intergenic |
| TCATTCGATTTAACCGGGTT+TGG | 0.384601 | 5.3:-70601287 | MS.gene37825:CDS |
| TTCAATAACTACACAATTGG+TGG | 0.384657 | 5.3:+70601181 | None:intergenic |
| CCTCACGAGCTTGCGAATCT+TGG | 0.387734 | 5.3:+70601919 | None:intergenic |
| TGGTGGAGGTACTGGTTCTA+TGG | 0.388085 | 5.3:-70601774 | MS.gene37825:CDS |
| GGTTTCAAAAGGAGAGTTCA+TGG | 0.396115 | 5.3:+70601004 | None:intergenic |
| TTATCCTCTGGTGGAGGTAC+TGG | 0.399202 | 5.3:-70601782 | MS.gene37825:CDS |
| AATCTTCATCCATCCAATCT+TGG | 0.400017 | 5.3:-70601671 | MS.gene37825:CDS |
| CATTCTATCCATCCCAAGAT+TGG | 0.409448 | 5.3:+70601658 | None:intergenic |
| TTGTGGTACACTTGGGGAAG+GGG | 0.411806 | 5.3:-70602662 | MS.gene37825:CDS |
| TAGGTTGAACAAAGCTTTGT+GGG | 0.411860 | 5.3:+70601345 | None:intergenic |
| AGAAACAGTCCTGCAGGTTA+TGG | 0.412726 | 5.3:-70601410 | MS.gene37825:CDS |
| CTCGCCTTGCCTTTCAAGAT+AGG | 0.415938 | 5.3:-70601475 | MS.gene37825:CDS |
| CAAGCAGATAACGCAATTCC+AGG | 0.415992 | 5.3:-70602244 | MS.gene37825:CDS |
| GTCCTGTTGTTGCTGAATGA+TGG | 0.418159 | 5.3:+70601106 | None:intergenic |
| TTGATTGATGATGGCAAGCC+AGG | 0.425788 | 5.3:+70601850 | None:intergenic |
| AATAATATGCATCCCATGTA+TGG | 0.430283 | 5.3:-70600966 | MS.gene37825:CDS |
| ATCTTCATCCATCCAATCTT+GGG | 0.436018 | 5.3:-70601670 | MS.gene37825:CDS |
| GGCAAGGCAGTCTCAAGAAC+AGG | 0.441318 | 5.3:-70602473 | MS.gene37825:CDS |
| TGATTATAGCGATGAAGAAA+TGG | 0.445620 | 5.3:-70602593 | MS.gene37825:CDS |
| TGAGGTTTCTTGTATGGTGG+AGG | 0.446444 | 5.3:+70602010 | None:intergenic |
| TCCTGTTGTTGCTGAATGAT+GGG | 0.449666 | 5.3:+70601107 | None:intergenic |
| TTGTTGAGGTTGGTTTCAAA+AGG | 0.451254 | 5.3:+70600993 | None:intergenic |
| GGGAGAGGTTGTCACAAACT+TGG | 0.451465 | 5.3:-70601594 | MS.gene37825:CDS |
| CCTCGGTAGCATGAAAATTA+GGG | 0.456819 | 5.3:+70601384 | None:intergenic |
| GGCTATGATACACATGTTAT+AGG | 0.462962 | 5.3:-70601221 | MS.gene37825:CDS |
| TCACAAACTTGGATTTCATT+CGG | 0.464079 | 5.3:-70601583 | MS.gene37825:CDS |
| GGATTCCTCTTGATTGATGA+TGG | 0.464516 | 5.3:+70601841 | None:intergenic |
| TTTGTGGTACACTTGGGGAA+GGG | 0.466355 | 5.3:-70602663 | MS.gene37825:CDS |
| ACCCATCATTCAGCAACAAC+AGG | 0.469177 | 5.3:-70601108 | MS.gene37825:CDS |
| GGCCAACCGGGACTGAAGAC+TGG | 0.469478 | 5.3:-70602066 | MS.gene37825:CDS |
| TTGGATGGATGAAGATTCTC+GGG | 0.470657 | 5.3:+70601677 | None:intergenic |
| GCATATTATTGTTGTTGTTG+AGG | 0.474406 | 5.3:+70600979 | None:intergenic |
| CAGGCAAACCGAGCCAGATT+CGG | 0.479153 | 5.3:-70602626 | MS.gene37825:CDS |
| TCGTGAATGGTGGAAGGATA+AGG | 0.479265 | 5.3:-70602308 | MS.gene37825:CDS |
| GAAAATGATGGAGGTTTGTA+AGG | 0.484505 | 5.3:-70602398 | MS.gene37825:CDS |
| TCCTCAGAGGCGTTTCCCAT+TGG | 0.490597 | 5.3:-70602113 | MS.gene37825:CDS |
| GAGAGTTCATGGCCTTGAAC+CGG | 0.490862 | 5.3:+70601015 | None:intergenic |
| AAGGGGATATTTCTTCTGTC+AGG | 0.493214 | 5.3:-70602645 | MS.gene37825:CDS |
| GAGGATTGCCCTTCTCCAAT+GGG | 0.493994 | 5.3:+70602098 | None:intergenic |
| ACGAAGATTGTCAGATGCTC+CGG | 0.495666 | 5.3:+70602327 | None:intergenic |
| ATTGGATGGATGAAGATTCT+CGG | 0.495807 | 5.3:+70601676 | None:intergenic |
| AATTCCCGAGAAGGGAAAAC+CGG | 0.496336 | 5.3:-70602353 | MS.gene37825:CDS |
| TTGTCAGATGCTCCGGTCAC+CGG | 0.496468 | 5.3:+70602334 | None:intergenic |
| GCAACCTTCTCATCAAATCA+AGG | 0.497251 | 5.3:-70601615 | MS.gene37825:CDS |
| CACCTTCATTCGATTTAACC+GGG | 0.498971 | 5.3:-70601292 | MS.gene37825:CDS |
| GGGCCACCAGTCTTCAGTCC+CGG | 0.499009 | 5.3:+70602060 | None:intergenic |
| CCGGTTGGCCACCATGGTGG+AGG | 0.499341 | 5.3:+70602079 | None:intergenic |
| AAATCAGTTTGACCGGTTCA+AGG | 0.500225 | 5.3:-70601027 | MS.gene37825:CDS |
| CATCAATCAAGAGGAATCCT+TGG | 0.505411 | 5.3:-70601837 | MS.gene37825:CDS |
| GATGATGATGTTTGAGGACA+TGG | 0.505605 | 5.3:-70602710 | MS.gene37825:CDS |
| TCTTGCAAGGTGTGTGGAGT+TGG | 0.508004 | 5.3:+70602193 | None:intergenic |
| TGCAGTGAGTATGATGTTGA+TGG | 0.508204 | 5.3:-70601740 | MS.gene37825:CDS |
| ATGATCAGCGACCTTATGTC+AGG | 0.516438 | 5.3:-70601242 | MS.gene37825:CDS |
| CGAGCCAGATTCGGTGGTCG+AGG | 0.516671 | 5.3:-70602617 | MS.gene37825:CDS |
| CTCGACCACCGAATCTGGCT+CGG | 0.517344 | 5.3:+70602618 | None:intergenic |
| GAATTACAGGACACAACCTT+GGG | 0.517537 | 5.3:-70602172 | MS.gene37825:CDS |
| TAACGACTTCAACATGATGA+TGG | 0.518203 | 5.3:-70601546 | MS.gene37825:CDS |
| GGAGGATTGCCCTTCTCCAA+TGG | 0.519182 | 5.3:+70602097 | None:intergenic |
| ATCGGTTTGCCTAAAGATCA+AGG | 0.519416 | 5.3:-70602034 | MS.gene37825:CDS |
| ATGAGCTTGAGCGGAGGATG+TGG | 0.520497 | 5.3:-70602564 | MS.gene37825:CDS |
| ATCACATGAAGAACCATACA+TGG | 0.521967 | 5.3:+70600953 | None:intergenic |
| AGAATTACAGGACACAACCT+TGG | 0.524464 | 5.3:-70602173 | MS.gene37825:CDS |
| CTCCACCATGGTGGCCAACC+GGG | 0.526692 | 5.3:-70602078 | MS.gene37825:CDS |
| GTGTATCATAGCCTGACATA+AGG | 0.531266 | 5.3:+70601231 | None:intergenic |
| GAGGCGTTTCCCATTGGAGA+AGG | 0.531537 | 5.3:-70602107 | MS.gene37825:CDS |
| GAGGTTTCTTGTATGGTGGA+GGG | 0.533491 | 5.3:+70602011 | None:intergenic |
| GCTGAATGATGGGTTGAGAA+AGG | 0.534026 | 5.3:+70601117 | None:intergenic |
| GCAATTCCAGGAAAGAATGA+TGG | 0.536106 | 5.3:-70602232 | MS.gene37825:CDS |
| TCTCCCTTGATTTGATGAGA+AGG | 0.537373 | 5.3:+70601611 | None:intergenic |
| ATTCAATTGATGATTGTCCC+TGG | 0.537403 | 5.3:+70601448 | None:intergenic |
| ATCTTGGGATGGATAGAATG+AGG | 0.537865 | 5.3:-70601655 | MS.gene37825:CDS |
| TAGATCCTCCTTAAAATCAA+AGG | 0.539849 | 5.3:+70600923 | None:intergenic |
| GTACCTCCACCAGAGGATAA+CGG | 0.539881 | 5.3:+70601785 | None:intergenic |
| TCAGTCCCGGTTGGCCACCA+TGG | 0.540302 | 5.3:+70602073 | None:intergenic |
| ACTTGGATTTCATTCGGAAG+AGG | 0.540565 | 5.3:-70601577 | MS.gene37825:CDS |
| TTAGGTTGAACAAAGCTTTG+TGG | 0.541625 | 5.3:+70601344 | None:intergenic |
| GAACAAACCAAGGCTAAAGA+AGG | 0.542936 | 5.3:-70602511 | MS.gene37825:CDS |
| TTTGAATCAAGGAATGGTGA+TGG | 0.544516 | 5.3:-70601075 | MS.gene37825:CDS |
| CAGCCAAGGAAAGCGCAACC+TGG | 0.544615 | 5.3:-70601868 | MS.gene37825:CDS |
| GAAGTACATGCTGAAAATGA+TGG | 0.545558 | 5.3:-70602410 | MS.gene37825:CDS |
| AGCTTGAGCGGAGGATGTGG+AGG | 0.545764 | 5.3:-70602561 | MS.gene37825:CDS |
| GAGAAGGGAAAACCGGTGAC+CGG | 0.547110 | 5.3:-70602346 | MS.gene37825:CDS |
| AGAAACAGAAACAGTCCTGC+AGG | 0.548675 | 5.3:-70601416 | MS.gene37825:CDS |
| GGACTGTTTCTGTTTCTATG+TGG | 0.550312 | 5.3:+70601422 | None:intergenic |
| TGATACTTGGATATGGCAGC+AGG | 0.550770 | 5.3:+70602265 | None:intergenic |
| GAAGGTGGAACTAAACTAGC+AGG | 0.551330 | 5.3:+70601308 | None:intergenic |
| AGGATAAGGTTCGGTTCGAT+AGG | 0.552012 | 5.3:-70602294 | MS.gene37825:CDS |
| TTAGGGTCGCCATAACCTGC+AGG | 0.552645 | 5.3:+70601401 | None:intergenic |
| GCTGAATGATGGGCTGAGAA+AGG | 0.553081 | 5.3:+70601150 | None:intergenic |
| TTCTCATCAAATCAAGGGAG+AGG | 0.554659 | 5.3:-70601609 | MS.gene37825:CDS |
| CTTTCAAGATAGGTCTTCCA+GGG | 0.555713 | 5.3:-70601465 | MS.gene37825:CDS |
| TATGGGATAATTCCCGAGAA+GGG | 0.556990 | 5.3:-70602361 | MS.gene37825:CDS |
| GGAAAAGATGATGATGTTTG+AGG | 0.557260 | 5.3:-70602716 | None:intergenic |
| CTATCCATCCCAAGATTGGA+TGG | 0.557944 | 5.3:+70601662 | None:intergenic |
| CTGACAATCTTCGTGAATGG+TGG | 0.558385 | 5.3:-70602318 | MS.gene37825:CDS |
| GGTGTGTGGAGTTGGACCTA+TGG | 0.558968 | 5.3:+70602201 | None:intergenic |
| CCTGGAAGACCTATCTTGAA+AGG | 0.560673 | 5.3:+70601466 | None:intergenic |
| CTACAACTACAAGGAGGAGT+AGG | 0.563021 | 5.3:-70600903 | MS.gene37825:CDS |
| GCGAGGAAAATCAGTTTGAC+CGG | 0.565875 | 5.3:-70601034 | MS.gene37825:CDS |
| CATCTGACAATCTTCGTGAA+TGG | 0.567255 | 5.3:-70602321 | MS.gene37825:CDS |
| CCAAGATTCGCAAGCTCGTG+AGG | 0.567603 | 5.3:-70601919 | MS.gene37825:CDS |
| TCATGAGGTTTCTTGTATGG+TGG | 0.567990 | 5.3:+70602007 | None:intergenic |
| TGGATAAAGTTCTCGAGCCA+AGG | 0.568027 | 5.3:+70601820 | None:intergenic |
| CACCAGTCTTCAGTCCCGGT+TGG | 0.570122 | 5.3:+70602064 | None:intergenic |
| TTATGGGATAATTCCCGAGA+AGG | 0.572124 | 5.3:-70602362 | MS.gene37825:CDS |
| AACCCGGTTAAATCGAATGA+AGG | 0.572351 | 5.3:+70601290 | None:intergenic |
| AACCGGGTTTGGAGTTTCAG+AGG | 0.572588 | 5.3:-70601276 | MS.gene37825:CDS |
| AATGGTGGAAGGATAAGGTT+CGG | 0.572803 | 5.3:-70602303 | MS.gene37825:CDS |
| AGGCGTTTCCCATTGGAGAA+GGG | 0.573544 | 5.3:-70602106 | MS.gene37825:CDS |
| GGCAGTCTCAAGAACAGGCA+AGG | 0.574300 | 5.3:-70602468 | MS.gene37825:CDS |
| AGAAGGAATTGATGCTGCAA+AGG | 0.574701 | 5.3:-70602494 | MS.gene37825:CDS |
| GCAGTGAGTATGATGTTGAT+GGG | 0.574936 | 5.3:-70601739 | MS.gene37825:CDS |
| GTCCCGGTTGGCCACCATGG+TGG | 0.575585 | 5.3:+70602076 | None:intergenic |
| TAGCGATGAAGAAATGGATG+TGG | 0.575591 | 5.3:-70602587 | MS.gene37825:CDS |
| GGGTTTGGAGTTTCAGAGGA+CGG | 0.579877 | 5.3:-70601272 | MS.gene37825:CDS |
| AATGATGGATGCAATTCCAT+AGG | 0.584074 | 5.3:-70602217 | MS.gene37825:CDS |
| CGAGTCAAACTTTGATGTGG+AGG | 0.584361 | 5.3:-70601708 | MS.gene37825:CDS |
| AATGGGAAACGCCTCTGAGG+AGG | 0.586375 | 5.3:+70602115 | None:intergenic |
| TGCTGATAAGAGAGAACCCA+AGG | 0.586902 | 5.3:+70602156 | None:intergenic |
| TGTAATTCTTGCAAGGTGTG+TGG | 0.593213 | 5.3:+70602187 | None:intergenic |
| TGTGTCCTGTAATTCTTGCA+AGG | 0.594212 | 5.3:+70602180 | None:intergenic |
| TCTTGGGATGGATAGAATGA+GGG | 0.594489 | 5.3:-70601654 | MS.gene37825:CDS |
| CAACCTTCTCATCAAATCAA+GGG | 0.596906 | 5.3:-70601614 | MS.gene37825:CDS |
| TCAAGATAAAATGACAGCCA+AGG | 0.597129 | 5.3:-70601882 | MS.gene37825:CDS |
| TCATCCATCCAATCTTGGGA+TGG | 0.598664 | 5.3:-70601666 | MS.gene37825:CDS |
| CTTGGGATGGATAGAATGAG+GGG | 0.601634 | 5.3:-70601653 | MS.gene37825:CDS |
| CAATCTTCGTGAATGGTGGA+AGG | 0.601878 | 5.3:-70602314 | MS.gene37825:CDS |
| AAGGAGGATCTACAACTACA+AGG | 0.608788 | 5.3:-70600912 | MS.gene37825:CDS |
| AAGGTTCGGTTCGATAGGAA+TGG | 0.610184 | 5.3:-70602289 | MS.gene37825:CDS |
| GCAAACCGAGCCAGATTCGG+TGG | 0.610299 | 5.3:-70602623 | MS.gene37825:CDS |
| ACTACAAGGAGGAGTAGGAA+TGG | 0.611304 | 5.3:-70600898 | MS.gene37825:CDS |
| AAGATGTCAAGAGCTCAAGA+TGG | 0.612194 | 5.3:-70602439 | MS.gene37825:CDS |
| CCGGTTAAATCGAATGAAGG+TGG | 0.612673 | 5.3:+70601293 | None:intergenic |
| GCTTCGCTGTAAGCGCATTG+AGG | 0.613195 | 5.3:+70601497 | None:intergenic |
| CGGCGAGTCAAACTTTGATG+TGG | 0.614982 | 5.3:-70601711 | MS.gene37825:CDS |
| TCCAATGGGAAACGCCTCTG+AGG | 0.618975 | 5.3:+70602112 | None:intergenic |
| GAAGACTGGTGGCCCCAGAT+CGG | 0.620125 | 5.3:-70602052 | MS.gene37825:CDS |
| AAGACCTATCTTGAAAGGCA+AGG | 0.620631 | 5.3:+70601471 | None:intergenic |
| GTCCTCTGAAACTCCAAACC+CGG | 0.621593 | 5.3:+70601274 | None:intergenic |
| TATGATGTTGATGGGGCTGA+CGG | 0.622733 | 5.3:-70601731 | MS.gene37825:CDS |
| GCTTGCCATCATCAATCAAG+AGG | 0.624863 | 5.3:-70601846 | MS.gene37825:CDS |
| GAATTGATGCTGCAAAGGCA+AGG | 0.624873 | 5.3:-70602489 | MS.gene37825:CDS |
| GAATCAAGGAATGGTGATGG+AGG | 0.630262 | 5.3:-70601072 | MS.gene37825:CDS |
| ATGGAGGTTTGTAAGGCACA+AGG | 0.638043 | 5.3:-70602391 | MS.gene37825:CDS |
| GAAAATAACTGGCTTAACCT+CGG | 0.643010 | 5.3:+70601367 | None:intergenic |
| GCTTGAGCGGAGGATGTGGA+GGG | 0.653404 | 5.3:-70602560 | MS.gene37825:CDS |
| AGTCTCAAGAACAGGCAAGG+AGG | 0.658159 | 5.3:-70602465 | MS.gene37825:CDS |
| TGGATGTGGATGAGCTTGAG+CGG | 0.660750 | 5.3:-70602573 | MS.gene37825:CDS |
| CAACCGGGACTGAAGACTGG+TGG | 0.661902 | 5.3:-70602063 | MS.gene37825:CDS |
| TCTTTAGGCAAACCGATCTG+GGG | 0.665997 | 5.3:+70602040 | None:intergenic |
| ATGATGATGTTTGAGGACAT+GGG | 0.668420 | 5.3:-70602709 | MS.gene37825:CDS |
| AGCACTGCGATCCTCCTCAG+AGG | 0.670631 | 5.3:-70602126 | MS.gene37825:CDS |
| ACCTCCACCAGAGGATAACG+GGG | 0.673590 | 5.3:+70601787 | None:intergenic |
| TCACATGAAGAACCATACAT+GGG | 0.685805 | 5.3:+70600954 | None:intergenic |
| GCGACTGAAAGAACAAACCA+AGG | 0.688069 | 5.3:-70602521 | MS.gene37825:CDS |
| CAGTGAGTATGATGTTGATG+GGG | 0.693933 | 5.3:-70601738 | MS.gene37825:CDS |
| AGGGCAATCCTCCACCATGG+TGG | 0.709968 | 5.3:-70602087 | MS.gene37825:CDS |
| ATGTGGATGAGCTTGAGCGG+AGG | 0.710465 | 5.3:-70602570 | MS.gene37825:CDS |
| AGAAGGGCAATCCTCCACCA+TGG | 0.713618 | 5.3:-70602090 | MS.gene37825:CDS |
| AGAACCAGTACCTCCACCAG+AGG | 0.719646 | 5.3:+70601778 | None:intergenic |
| GTACATGCTGAAAATGATGG+AGG | 0.724912 | 5.3:-70602407 | MS.gene37825:CDS |
| CTCCACCAGAGGATAACGGG+GGG | 0.729921 | 5.3:+70601789 | None:intergenic |
| CCTCCACCAGAGGATAACGG+GGG | 0.744768 | 5.3:+70601788 | None:intergenic |
| GAGGATCTACAACTACAAGG+AGG | 0.776973 | 5.3:-70600909 | MS.gene37825:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTCAATAACTACACAAT+TGG | + | chr5.3:70602388-70602407 | None:intergenic | 20.0% |
| ! | AACAACAAGATGTTTCAATA+TGG | - | chr5.3:70602700-70602719 | MS.gene37825:CDS | 25.0% |
| !! | GACAATTTCTTTTTGAATCA+AGG | - | chr5.3:70602477-70602496 | MS.gene37825:CDS | 25.0% |
| !! | TTTCTTTTTGAATCAAGGAA+TGG | - | chr5.3:70602482-70602501 | MS.gene37825:CDS | 25.0% |
| AATAATATGCATCCCATGTA+TGG | - | chr5.3:70602597-70602616 | MS.gene37825:CDS | 30.0% | |
| TAGATCCTCCTTAAAATCAA+AGG | + | chr5.3:70602643-70602662 | None:intergenic | 30.0% | |
| TCACAAACTTGGATTTCATT+CGG | - | chr5.3:70601980-70601999 | MS.gene37825:CDS | 30.0% | |
| TGATTATAGCGATGAAGAAA+TGG | - | chr5.3:70600970-70600989 | MS.gene37825:CDS | 30.0% | |
| TTCAATAACTACACAATTGG+TGG | + | chr5.3:70602385-70602404 | None:intergenic | 30.0% | |
| ! | ATTATTGTTGTTGTTGAGGT+TGG | + | chr5.3:70602583-70602602 | None:intergenic | 30.0% |
| ! | GCATATTATTGTTGTTGTTG+AGG | + | chr5.3:70602587-70602606 | None:intergenic | 30.0% |
| ! | TTGAAAAAAGCATGGAAAGT+CGG | - | chr5.3:70601580-70601599 | MS.gene37825:CDS | 30.0% |
| !! | TTTGGCATCCTTTGATTTTA+AGG | - | chr5.3:70602632-70602651 | MS.gene37825:CDS | 30.0% |
| !!! | CATTTTATCTTGAAGGCATT+TGG | + | chr5.3:70601674-70601693 | None:intergenic | 30.0% |
| !!! | TTTTGTTGTTGCTGAATGAT+GGG | + | chr5.3:70602426-70602445 | None:intergenic | 30.0% |
| AAGTCATGAGGTTTCTTGTA+TGG | + | chr5.3:70601562-70601581 | None:intergenic | 35.0% | |
| AATCTTCATCCATCCAATCT+TGG | - | chr5.3:70601892-70601911 | MS.gene37825:CDS | 35.0% | |
| ATCAATTCCTTCTTTAGCCT+TGG | + | chr5.3:70601062-70601081 | None:intergenic | 35.0% | |
| ATCACATGAAGAACCATACA+TGG | + | chr5.3:70602613-70602632 | None:intergenic | 35.0% | |
| ATCTGCTTGATACTTGGATA+TGG | + | chr5.3:70601308-70601327 | None:intergenic | 35.0% | |
| ATCTTCATCCATCCAATCTT+GGG | - | chr5.3:70601893-70601912 | MS.gene37825:CDS | 35.0% | |
| ATTGGATGGATGAAGATTCT+CGG | + | chr5.3:70601890-70601909 | None:intergenic | 35.0% | |
| CAACCTTCTCATCAAATCAA+GGG | - | chr5.3:70601949-70601968 | MS.gene37825:CDS | 35.0% | |
| CTCATGACTTGAAAAAAGCA+TGG | - | chr5.3:70601572-70601591 | MS.gene37825:CDS | 35.0% | |
| GAAGTACATGCTGAAAATGA+TGG | - | chr5.3:70601153-70601172 | MS.gene37825:CDS | 35.0% | |
| GGCTATGATACACATGTTAT+AGG | - | chr5.3:70602342-70602361 | MS.gene37825:CDS | 35.0% | |
| GTATGGTTCTTCATGTGATT+TGG | - | chr5.3:70602614-70602633 | MS.gene37825:CDS | 35.0% | |
| TAACGACTTCAACATGATGA+TGG | - | chr5.3:70602017-70602036 | MS.gene37825:CDS | 35.0% | |
| TCAAGATAAAATGACAGCCA+AGG | - | chr5.3:70601681-70601700 | MS.gene37825:CDS | 35.0% | |
| TCACATGAAGAACCATACAT+GGG | + | chr5.3:70602612-70602631 | None:intergenic | 35.0% | |
| TTTGAATCAAGGAATGGTGA+TGG | - | chr5.3:70602488-70602507 | MS.gene37825:CDS | 35.0% | |
| ! | AAGCTTTGTGGGAAAATAAC+TGG | + | chr5.3:70602210-70602229 | None:intergenic | 35.0% |
| ! | ATGATGATGTTTGAGGACAT+GGG | - | chr5.3:70600854-70600873 | MS.gene37825:CDS | 35.0% |
| ! | ATGTGTTTTGTGGTACACTT+GGG | - | chr5.3:70600894-70600913 | MS.gene37825:CDS | 35.0% |
| ! | ATTCAATTGATGATTGTCCC+TGG | + | chr5.3:70602118-70602137 | None:intergenic | 35.0% |
| ! | GAAAATAACTGGCTTAACCT+CGG | + | chr5.3:70602199-70602218 | None:intergenic | 35.0% |
| ! | GAAAATGATGGAGGTTTGTA+AGG | - | chr5.3:70601165-70601184 | MS.gene37825:CDS | 35.0% |
| ! | TAGGTTGAACAAAGCTTTGT+GGG | + | chr5.3:70602221-70602240 | None:intergenic | 35.0% |
| !! | AATGATGGATGCAATTCCAT+AGG | - | chr5.3:70601346-70601365 | MS.gene37825:CDS | 35.0% |
| !! | TTAGGTTGAACAAAGCTTTG+TGG | + | chr5.3:70602222-70602241 | None:intergenic | 35.0% |
| !! | TTGTTGAGGTTGGTTTCAAA+AGG | + | chr5.3:70602573-70602592 | None:intergenic | 35.0% |
| !!! | CATGCTTTTTTCAAGTCATG+AGG | + | chr5.3:70601574-70601593 | None:intergenic | 35.0% |
| !!! | GTTTTGTTGTTGCTGAATGA+TGG | + | chr5.3:70602427-70602446 | None:intergenic | 35.0% |
| !!! | TGGCTGTCATTTTATCTTGA+AGG | + | chr5.3:70601681-70601700 | None:intergenic | 35.0% |
| AACCCGGTTAAATCGAATGA+AGG | + | chr5.3:70602276-70602295 | None:intergenic | 40.0% | |
| AAGACCTATCTTGAAAGGCA+AGG | + | chr5.3:70602095-70602114 | None:intergenic | 40.0% | |
| AAGATGTCAAGAGCTCAAGA+TGG | - | chr5.3:70601124-70601143 | MS.gene37825:CDS | 40.0% | |
| AAGGAGGATCTACAACTACA+AGG | - | chr5.3:70602651-70602670 | MS.gene37825:CDS | 40.0% | |
| AAGGGGATATTTCTTCTGTC+AGG | - | chr5.3:70600918-70600937 | MS.gene37825:CDS | 40.0% | |
| ACACACCTTGCAAGAATTAC+AGG | - | chr5.3:70601378-70601397 | MS.gene37825:CDS | 40.0% | |
| ACCTCGGTAGCATGAAAATT+AGG | + | chr5.3:70602183-70602202 | None:intergenic | 40.0% | |
| ACTTGGATTTCATTCGGAAG+AGG | - | chr5.3:70601986-70602005 | MS.gene37825:CDS | 40.0% | |
| AGAAGGAATTGATGCTGCAA+AGG | - | chr5.3:70601069-70601088 | MS.gene37825:CDS | 40.0% | |
| AGAATTACAGGACACAACCT+TGG | - | chr5.3:70601390-70601409 | MS.gene37825:CDS | 40.0% | |
| ATCTTGGGATGGATAGAATG+AGG | - | chr5.3:70601908-70601927 | MS.gene37825:CDS | 40.0% | |
| ATCTTTAGGCAAACCGATCT+GGG | + | chr5.3:70601527-70601546 | None:intergenic | 40.0% | |
| CACCTTCATTCGATTTAACC+GGG | - | chr5.3:70602271-70602290 | MS.gene37825:CDS | 40.0% | |
| CAGTGAGTATGATGTTGATG+GGG | - | chr5.3:70601825-70601844 | MS.gene37825:CDS | 40.0% | |
| CATCAATCAAGAGGAATCCT+TGG | - | chr5.3:70601726-70601745 | MS.gene37825:CDS | 40.0% | |
| CATCTGACAATCTTCGTGAA+TGG | - | chr5.3:70601242-70601261 | MS.gene37825:CDS | 40.0% | |
| CATTCTATCCATCCCAAGAT+TGG | + | chr5.3:70601908-70601927 | None:intergenic | 40.0% | |
| CCACCTTCATTCGATTTAAC+CGG | - | chr5.3:70602270-70602289 | MS.gene37825:CDS | 40.0% | |
| CCTCGGTAGCATGAAAATTA+GGG | + | chr5.3:70602182-70602201 | None:intergenic | 40.0% | |
| CTTTCAAGATAGGTCTTCCA+GGG | - | chr5.3:70602098-70602117 | MS.gene37825:CDS | 40.0% | |
| GAACAAACCAAGGCTAAAGA+AGG | - | chr5.3:70601052-70601071 | MS.gene37825:CDS | 40.0% | |
| GAATTACAGGACACAACCTT+GGG | - | chr5.3:70601391-70601410 | MS.gene37825:CDS | 40.0% | |
| GCAACCTTCTCATCAAATCA+AGG | - | chr5.3:70601948-70601967 | MS.gene37825:CDS | 40.0% | |
| GCAATTCCAGGAAAGAATGA+TGG | - | chr5.3:70601331-70601350 | MS.gene37825:CDS | 40.0% | |
| GCAGTGAGTATGATGTTGAT+GGG | - | chr5.3:70601824-70601843 | MS.gene37825:CDS | 40.0% | |
| GGATTCCTCTTGATTGATGA+TGG | + | chr5.3:70601725-70601744 | None:intergenic | 40.0% | |
| GGTTTCAAAAGGAGAGTTCA+TGG | + | chr5.3:70602562-70602581 | None:intergenic | 40.0% | |
| GTACATGCTGAAAATGATGG+AGG | - | chr5.3:70601156-70601175 | MS.gene37825:CDS | 40.0% | |
| GTGTATCATAGCCTGACATA+AGG | + | chr5.3:70602335-70602354 | None:intergenic | 40.0% | |
| TAGCGATGAAGAAATGGATG+TGG | - | chr5.3:70600976-70600995 | MS.gene37825:CDS | 40.0% | |
| TATGGGATAATTCCCGAGAA+GGG | - | chr5.3:70601202-70601221 | MS.gene37825:CDS | 40.0% | |
| TCATGAGGTTTCTTGTATGG+TGG | + | chr5.3:70601559-70601578 | None:intergenic | 40.0% | |
| TCATTCGATTTAACCGGGTT+TGG | - | chr5.3:70602276-70602295 | MS.gene37825:CDS | 40.0% | |
| TCCTGTTGTTGCTGAATGAT+GGG | + | chr5.3:70602459-70602478 | None:intergenic | 40.0% | |
| TCTTGGGATGGATAGAATGA+GGG | - | chr5.3:70601909-70601928 | MS.gene37825:CDS | 40.0% | |
| TGCAGTGAGTATGATGTTGA+TGG | - | chr5.3:70601823-70601842 | MS.gene37825:CDS | 40.0% | |
| TGCGTTATCTGCTTGATACT+TGG | + | chr5.3:70601314-70601333 | None:intergenic | 40.0% | |
| TGTAATTCTTGCAAGGTGTG+TGG | + | chr5.3:70601379-70601398 | None:intergenic | 40.0% | |
| TGTGTCCTGTAATTCTTGCA+AGG | + | chr5.3:70601386-70601405 | None:intergenic | 40.0% | |
| TTATGGGATAATTCCCGAGA+AGG | - | chr5.3:70601201-70601220 | MS.gene37825:CDS | 40.0% | |
| TTCTCATCAAATCAAGGGAG+AGG | - | chr5.3:70601954-70601973 | MS.gene37825:CDS | 40.0% | |
| TTGCATCCATCATTCTTTCC+TGG | + | chr5.3:70601340-70601359 | None:intergenic | 40.0% | |
| TTGCGAATCTTGGCTATATC+AGG | + | chr5.3:70601637-70601656 | None:intergenic | 40.0% | |
| TTGGATGGATGAAGATTCTC+GGG | + | chr5.3:70601889-70601908 | None:intergenic | 40.0% | |
| ! | AAATCAGTTTGACCGGTTCA+AGG | - | chr5.3:70602536-70602555 | MS.gene37825:CDS | 40.0% |
| ! | AATGGTGGAAGGATAAGGTT+CGG | - | chr5.3:70601260-70601279 | MS.gene37825:CDS | 40.0% |
| ! | CATGGGATTTTGTGGTGATT+TGG | - | chr5.3:70600871-70600890 | MS.gene37825:CDS | 40.0% |
| ! | GATGAAGATTCTCGGGTTTT+CGG | + | chr5.3:70601882-70601901 | None:intergenic | 40.0% |
| ! | GATGTGTTTTGTGGTACACT+TGG | - | chr5.3:70600893-70600912 | MS.gene37825:CDS | 40.0% |
| ! | TAAGGTCGCTGATCATTTTC+TGG | + | chr5.3:70602317-70602336 | None:intergenic | 40.0% |
| ! | TCTCCCTTGATTTGATGAGA+AGG | + | chr5.3:70601955-70601974 | None:intergenic | 40.0% |
| ! | TGCTCGCATGTGTACATTTT+CGG | + | chr5.3:70602045-70602064 | None:intergenic | 40.0% |
| ! | TGTGTTTTGTGGTACACTTG+GGG | - | chr5.3:70600895-70600914 | MS.gene37825:CDS | 40.0% |
| ! | TTTGAGGACATGGGATTTTG+TGG | - | chr5.3:70600863-70600882 | MS.gene37825:CDS | 40.0% |
| !! | AAGGCACAAGGCTTTGTTTA+TGG | - | chr5.3:70601184-70601203 | MS.gene37825:CDS | 40.0% |
| !! | AGGCACAAGGCTTTGTTTAT+GGG | - | chr5.3:70601185-70601204 | MS.gene37825:CDS | 40.0% |
| !! | ATCGGTTTGCCTAAAGATCA+AGG | - | chr5.3:70601529-70601548 | MS.gene37825:CDS | 40.0% |
| !! | GGACTGTTTCTGTTTCTATG+TGG | + | chr5.3:70602144-70602163 | None:intergenic | 40.0% |
| !! | GGCATCCTTTGATTTTAAGG+AGG | - | chr5.3:70602635-70602654 | MS.gene37825:CDS | 40.0% |
| !! | GGTGATTTGGATGTGTTTTG+TGG | - | chr5.3:70600884-70600903 | MS.gene37825:CDS | 40.0% |
| AATTCCCGAGAAGGGAAAAC+CGG | - | chr5.3:70601210-70601229 | MS.gene37825:CDS | 45.0% | |
| ACCCATCATTCAGCAACAAC+AGG | - | chr5.3:70602455-70602474 | MS.gene37825:CDS | 45.0% | |
| ACGAAGATTGTCAGATGCTC+CGG | + | chr5.3:70601239-70601258 | None:intergenic | 45.0% | |
| ACTACAAGGAGGAGTAGGAA+TGG | - | chr5.3:70602665-70602684 | MS.gene37825:CDS | 45.0% | |
| AGAAACAGAAACAGTCCTGC+AGG | - | chr5.3:70602147-70602166 | MS.gene37825:CDS | 45.0% | |
| AGAAACAGTCCTGCAGGTTA+TGG | - | chr5.3:70602153-70602172 | MS.gene37825:CDS | 45.0% | |
| ATGATCAGCGACCTTATGTC+AGG | - | chr5.3:70602321-70602340 | MS.gene37825:CDS | 45.0% | |
| ATGGAGGTTTGTAAGGCACA+AGG | - | chr5.3:70601172-70601191 | MS.gene37825:CDS | 45.0% | |
| CAAGCAGATAACGCAATTCC+AGG | - | chr5.3:70601319-70601338 | MS.gene37825:CDS | 45.0% | |
| CCGGTTAAATCGAATGAAGG+TGG | + | chr5.3:70602273-70602292 | None:intergenic | 45.0% | |
| CCTGGAAGACCTATCTTGAA+AGG | + | chr5.3:70602100-70602119 | None:intergenic | 45.0% | |
| CCTTTCAAGATAGGTCTTCC+AGG | - | chr5.3:70602097-70602116 | MS.gene37825:CDS | 45.0% | |
| CGAGTCAAACTTTGATGTGG+AGG | - | chr5.3:70601855-70601874 | MS.gene37825:CDS | 45.0% | |
| CTACAACTACAAGGAGGAGT+AGG | - | chr5.3:70602660-70602679 | MS.gene37825:CDS | 45.0% | |
| CTATCCATCCCAAGATTGGA+TGG | + | chr5.3:70601904-70601923 | None:intergenic | 45.0% | |
| CTGACAATCTTCGTGAATGG+TGG | - | chr5.3:70601245-70601264 | MS.gene37825:CDS | 45.0% | |
| CTTGGGATGGATAGAATGAG+GGG | - | chr5.3:70601910-70601929 | MS.gene37825:CDS | 45.0% | |
| GAAGGTGGAACTAAACTAGC+AGG | + | chr5.3:70602258-70602277 | None:intergenic | 45.0% | |
| GAATTGATGCTGCAAAGGCA+AGG | - | chr5.3:70601074-70601093 | MS.gene37825:CDS | 45.0% | |
| GAGGATCTACAACTACAAGG+AGG | - | chr5.3:70602654-70602673 | MS.gene37825:CDS | 45.0% | |
| GATCTTTAGGCAAACCGATC+TGG | + | chr5.3:70601528-70601547 | None:intergenic | 45.0% | |
| GCAGGCTGAACTGTAGAATT+AGG | + | chr5.3:70602240-70602259 | None:intergenic | 45.0% | |
| GCGACTGAAAGAACAAACCA+AGG | - | chr5.3:70601042-70601061 | MS.gene37825:CDS | 45.0% | |
| GCGAGGAAAATCAGTTTGAC+CGG | - | chr5.3:70602529-70602548 | MS.gene37825:CDS | 45.0% | |
| GCTTGCCATCATCAATCAAG+AGG | - | chr5.3:70601717-70601736 | MS.gene37825:CDS | 45.0% | |
| GTCCTGTTGTTGCTGAATGA+TGG | + | chr5.3:70602460-70602479 | None:intergenic | 45.0% | |
| TCATCCATCCAATCTTGGGA+TGG | - | chr5.3:70601897-70601916 | MS.gene37825:CDS | 45.0% | |
| TCTTTAGGCAAACCGATCTG+GGG | + | chr5.3:70601526-70601545 | None:intergenic | 45.0% | |
| TGAGGTTTCTTGTATGGTGG+AGG | + | chr5.3:70601556-70601575 | None:intergenic | 45.0% | |
| TGATACTTGGATATGGCAGC+AGG | + | chr5.3:70601301-70601320 | None:intergenic | 45.0% | |
| TGATGAGAAGGTTGCTGAAC+TGG | + | chr5.3:70601943-70601962 | None:intergenic | 45.0% | |
| TGCTGATAAGAGAGAACCCA+AGG | + | chr5.3:70601410-70601429 | None:intergenic | 45.0% | |
| TGGATAAAGTTCTCGAGCCA+AGG | + | chr5.3:70601746-70601765 | None:intergenic | 45.0% | |
| TTTGTGGTACACTTGGGGAA+GGG | - | chr5.3:70600900-70600919 | MS.gene37825:CDS | 45.0% | |
| ! | AAGGTTCGGTTCGATAGGAA+TGG | - | chr5.3:70601274-70601293 | MS.gene37825:CDS | 45.0% |
| ! | AGGATAAGGTTCGGTTCGAT+AGG | - | chr5.3:70601269-70601288 | MS.gene37825:CDS | 45.0% |
| ! | CAATCTTCGTGAATGGTGGA+AGG | - | chr5.3:70601249-70601268 | MS.gene37825:CDS | 45.0% |
| ! | CCCTAATTTTCATGCTACCG+AGG | - | chr5.3:70602179-70602198 | MS.gene37825:CDS | 45.0% |
| ! | GAGGTTTCTTGTATGGTGGA+GGG | + | chr5.3:70601555-70601574 | None:intergenic | 45.0% |
| ! | TATGATGTTGATGGGGCTGA+CGG | - | chr5.3:70601832-70601851 | MS.gene37825:CDS | 45.0% |
| ! | TCGTGAATGGTGGAAGGATA+AGG | - | chr5.3:70601255-70601274 | MS.gene37825:CDS | 45.0% |
| ! | TTTTGTGGTACACTTGGGGA+AGG | - | chr5.3:70600899-70600918 | MS.gene37825:CDS | 45.0% |
| !! | GAATCAAGGAATGGTGATGG+AGG | - | chr5.3:70602491-70602510 | MS.gene37825:CDS | 45.0% |
| !! | GCTGAATGATGGGTTGAGAA+AGG | + | chr5.3:70602449-70602468 | None:intergenic | 45.0% |
| !! | TTGATTGATGATGGCAAGCC+AGG | + | chr5.3:70601716-70601735 | None:intergenic | 45.0% |
| !!! | GGCAAACTTTTTTACTCGCG+AGG | - | chr5.3:70602512-70602531 | MS.gene37825:CDS | 45.0% |
| AGGCGTTTCCCATTGGAGAA+GGG | - | chr5.3:70601457-70601476 | MS.gene37825:CDS | 50.0% | |
| AGTCTCAAGAACAGGCAAGG+AGG | - | chr5.3:70601098-70601117 | MS.gene37825:CDS | 50.0% | |
| CGGCGAGTCAAACTTTGATG+TGG | - | chr5.3:70601852-70601871 | MS.gene37825:CDS | 50.0% | |
| CTCGCCTTGCCTTTCAAGAT+AGG | - | chr5.3:70602088-70602107 | MS.gene37825:CDS | 50.0% | |
| GAGGATTGCCCTTCTCCAAT+GGG | + | chr5.3:70601468-70601487 | None:intergenic | 50.0% | |
| GGGAGAGGTTGTCACAAACT+TGG | - | chr5.3:70601969-70601988 | MS.gene37825:CDS | 50.0% | |
| GTACCTCCACCAGAGGATAA+CGG | + | chr5.3:70601781-70601800 | None:intergenic | 50.0% | |
| TACCTCCACCAGAGGATAAC+GGG | + | chr5.3:70601780-70601799 | None:intergenic | 50.0% | |
| TCTTGCAAGGTGTGTGGAGT+TGG | + | chr5.3:70601373-70601392 | None:intergenic | 50.0% | |
| TGGATGTGGATGAGCTTGAG+CGG | - | chr5.3:70600990-70601009 | MS.gene37825:CDS | 50.0% | |
| TTGTGGTACACTTGGGGAAG+GGG | - | chr5.3:70600901-70600920 | MS.gene37825:CDS | 50.0% | |
| ! | AACCGGGTTTGGAGTTTCAG+AGG | - | chr5.3:70602287-70602306 | MS.gene37825:CDS | 50.0% |
| ! | GAGAGTTCATGGCCTTGAAC+CGG | + | chr5.3:70602551-70602570 | None:intergenic | 50.0% |
| ! | GGGTTTGGAGTTTCAGAGGA+CGG | - | chr5.3:70602291-70602310 | MS.gene37825:CDS | 50.0% |
| ! | TTATCCTCTGGTGGAGGTAC+TGG | - | chr5.3:70601781-70601800 | MS.gene37825:CDS | 50.0% |
| !! | GATAACGGGGGGCAATAATC+TGG | + | chr5.3:70601766-70601785 | None:intergenic | 50.0% |
| !! | GCTGAATGATGGGCTGAGAA+AGG | + | chr5.3:70602416-70602435 | None:intergenic | 50.0% |
| !! | GTCCTCTGAAACTCCAAACC+CGG | + | chr5.3:70602292-70602311 | None:intergenic | 50.0% |
| !! | TGGTGGAGGTACTGGTTCTA+TGG | - | chr5.3:70601789-70601808 | MS.gene37825:CDS | 50.0% |
| AAGCCAGGTTGCGCTTTCCT+TGG | + | chr5.3:70601701-70601720 | None:intergenic | 55.0% | |
| ACCTCCACCAGAGGATAACG+GGG | + | chr5.3:70601779-70601798 | None:intergenic | 55.0% | |
| AGAACCAGTACCTCCACCAG+AGG | + | chr5.3:70601788-70601807 | None:intergenic | 55.0% | |
| AGAAGGGCAATCCTCCACCA+TGG | - | chr5.3:70601473-70601492 | MS.gene37825:CDS | 55.0% | |
| ATGAGCTTGAGCGGAGGATG+TGG | - | chr5.3:70600999-70601018 | MS.gene37825:CDS | 55.0% | |
| ATGTGGATGAGCTTGAGCGG+AGG | - | chr5.3:70600993-70601012 | MS.gene37825:CDS | 55.0% | |
| CAGGCAAACCGAGCCAGATT+CGG | - | chr5.3:70600937-70600956 | MS.gene37825:CDS | 55.0% | |
| CCAAGATTCGCAAGCTCGTG+AGG | - | chr5.3:70601644-70601663 | MS.gene37825:CDS | 55.0% | |
| CCTCACGAGCTTGCGAATCT+TGG | + | chr5.3:70601647-70601666 | None:intergenic | 55.0% | |
| GAGAAGGGAAAACCGGTGAC+CGG | - | chr5.3:70601217-70601236 | MS.gene37825:CDS | 55.0% | |
| GCTTCGCTGTAAGCGCATTG+AGG | + | chr5.3:70602069-70602088 | None:intergenic | 55.0% | |
| GGAGGATTGCCCTTCTCCAA+TGG | + | chr5.3:70601469-70601488 | None:intergenic | 55.0% | |
| GGCAAGGCAGTCTCAAGAAC+AGG | - | chr5.3:70601090-70601109 | MS.gene37825:CDS | 55.0% | |
| GGCAGTCTCAAGAACAGGCA+AGG | - | chr5.3:70601095-70601114 | MS.gene37825:CDS | 55.0% | |
| GGTGGAGGGCCTTGATCTTT+AGG | + | chr5.3:70601541-70601560 | None:intergenic | 55.0% | |
| GGTGTGTGGAGTTGGACCTA+TGG | + | chr5.3:70601365-70601384 | None:intergenic | 55.0% | |
| TATTGCCCCCCGTTATCCTC+TGG | - | chr5.3:70601769-70601788 | MS.gene37825:CDS | 55.0% | |
| TCATCCTCGACCACCGAATC+TGG | + | chr5.3:70600953-70600972 | None:intergenic | 55.0% | |
| TCCAATGGGAAACGCCTCTG+AGG | + | chr5.3:70601454-70601473 | None:intergenic | 55.0% | |
| TTAGGGTCGCCATAACCTGC+AGG | + | chr5.3:70602165-70602184 | None:intergenic | 55.0% | |
| TTGTCAGATGCTCCGGTCAC+CGG | + | chr5.3:70601232-70601251 | None:intergenic | 55.0% | |
| ! | AATGGGAAACGCCTCTGAGG+AGG | + | chr5.3:70601451-70601470 | None:intergenic | 55.0% |
| ! | GAGGCGTTTCCCATTGGAGA+AGG | - | chr5.3:70601456-70601475 | MS.gene37825:CDS | 55.0% |
| !! | TCCTCAGAGGCGTTTCCCAT+TGG | - | chr5.3:70601450-70601469 | MS.gene37825:CDS | 55.0% |
| !!! | GGTCACCGGTTTTCCCTTCT+CGG | + | chr5.3:70601218-70601237 | None:intergenic | 55.0% |
| !!! | GTCACCGGTTTTCCCTTCTC+GGG | + | chr5.3:70601217-70601236 | None:intergenic | 55.0% |
| AGCACTGCGATCCTCCTCAG+AGG | - | chr5.3:70601437-70601456 | MS.gene37825:CDS | 60.0% | |
| AGCTTGAGCGGAGGATGTGG+AGG | - | chr5.3:70601002-70601021 | MS.gene37825:CDS | 60.0% | |
| AGGGCAATCCTCCACCATGG+TGG | - | chr5.3:70601476-70601495 | MS.gene37825:CDS | 60.0% | |
| CAACCGGGACTGAAGACTGG+TGG | - | chr5.3:70601500-70601519 | MS.gene37825:CDS | 60.0% | |
| CACCAGTCTTCAGTCCCGGT+TGG | + | chr5.3:70601502-70601521 | None:intergenic | 60.0% | |
| CTCGACCACCGAATCTGGCT+CGG | + | chr5.3:70600948-70600967 | None:intergenic | 60.0% | |
| GAAGACTGGTGGCCCCAGAT+CGG | - | chr5.3:70601511-70601530 | MS.gene37825:CDS | 60.0% | |
| GCAAACCGAGCCAGATTCGG+TGG | - | chr5.3:70600940-70600959 | MS.gene37825:CDS | 60.0% | |
| GCTTGAGCGGAGGATGTGGA+GGG | - | chr5.3:70601003-70601022 | MS.gene37825:CDS | 60.0% | |
| ! | CAGCCAAGGAAAGCGCAACC+TGG | - | chr5.3:70601695-70601714 | MS.gene37825:CDS | 60.0% |
| ! | CCTCCACCAGAGGATAACGG+GGG | + | chr5.3:70601778-70601797 | None:intergenic | 60.0% |
| !! | CTCCACCAGAGGATAACGGG+GGG | + | chr5.3:70601777-70601796 | None:intergenic | 60.0% |
| CCCCCGTTATCCTCTGGTGG+AGG | - | chr5.3:70601775-70601794 | MS.gene37825:CDS | 65.0% | |
| CCTCCACCATGGTGGCCAAC+CGG | - | chr5.3:70601484-70601503 | MS.gene37825:CDS | 65.0% | |
| CTCCACCATGGTGGCCAACC+GGG | - | chr5.3:70601485-70601504 | MS.gene37825:CDS | 65.0% | |
| GGCCAACCGGGACTGAAGAC+TGG | - | chr5.3:70601497-70601516 | MS.gene37825:CDS | 65.0% | |
| GGGCCACCAGTCTTCAGTCC+CGG | + | chr5.3:70601506-70601525 | None:intergenic | 65.0% | |
| TGCCCCCCGTTATCCTCTGG+TGG | - | chr5.3:70601772-70601791 | MS.gene37825:CDS | 65.0% | |
| ! | TCAGTCCCGGTTGGCCACCA+TGG | + | chr5.3:70601493-70601512 | None:intergenic | 65.0% |
| !! | CGAGCCAGATTCGGTGGTCG+AGG | - | chr5.3:70600946-70600965 | MS.gene37825:CDS | 65.0% |
| ! | CCGGTTGGCCACCATGGTGG+AGG | + | chr5.3:70601487-70601506 | None:intergenic | 70.0% |
| ! | GTCCCGGTTGGCCACCATGG+TGG | + | chr5.3:70601490-70601509 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 70600854 | 70602731 | 70600854 | ID=MS.gene37825 |
| chr5.3 | mRNA | 70600854 | 70602731 | 70600854 | ID=MS.gene37825.t1;Parent=MS.gene37825 |
| chr5.3 | exon | 70600854 | 70602731 | 70600854 | ID=MS.gene37825.t1.exon1;Parent=MS.gene37825.t1 |
| chr5.3 | CDS | 70600854 | 70602731 | 70600854 | ID=cds.MS.gene37825.t1;Parent=MS.gene37825.t1 |
| Gene Sequence |
| Protein sequence |
