Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38027.t1 | XP_003617930.1 | 93.1 | 462 | 31 | 1 | 17 | 477 | 19 | 480 | 4.70E-246 | 860.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38027.t1 | Q9FKH1 | 46.4 | 440 | 213 | 8 | 42 | 474 | 20 | 443 | 6.3e-98 | 359.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38027.t1 | G7KEL4 | 93.1 | 462 | 31 | 1 | 17 | 477 | 19 | 480 | 3.4e-246 | 860.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene38027.t1 | TF | SAP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38027.t1 | MTR_5g097060 | 97.275 | 477 | 12 | 1 | 2 | 477 | 4 | 480 | 0.0 | 936 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38027.t1 | AT5G35770 | 46.136 | 440 | 214 | 8 | 42 | 474 | 20 | 443 | 1.61e-114 | 345 |
Find 147 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACTCTTCTATACATTTAT+TGG | 0.108359 | 5.1:+77404130 | MS.gene38027:CDS |
| TTATTAGGGTGCATGAATTT+AGG | 0.164199 | 5.1:+77403942 | MS.gene38027:CDS |
| TCATGGTTAAGAGGTTTATT+AGG | 0.167477 | 5.1:+77403927 | MS.gene38027:CDS |
| TGCCATCCTTGAACCGTTTC+CGG | 0.223972 | 5.1:-77403639 | None:intergenic |
| GCGTGAGTAGGTTTAGATTA+AGG | 0.227131 | 5.1:+77403901 | MS.gene38027:CDS |
| ACGGAACAGCGCGTGTTTAT+TGG | 0.228377 | 5.1:+77403600 | MS.gene38027:CDS |
| CCTGCACGACGGGCAATTAA+TGG | 0.265227 | 5.1:+77403468 | MS.gene38027:CDS |
| CCTTCTCCATCATCTCTAAC+TGG | 0.275457 | 5.1:-77404050 | None:intergenic |
| GGGTATGTTATAACATATTC+TGG | 0.276633 | 5.1:+77403963 | MS.gene38027:CDS |
| TCCGTTTCGGGAATTGTAAT+TGG | 0.284357 | 5.1:+77403360 | MS.gene38027:CDS |
| TATTAGGGTGCATGAATTTA+GGG | 0.289123 | 5.1:+77403943 | MS.gene38027:CDS |
| GTGCACATGTTAGCACATTT+TGG | 0.290721 | 5.1:+77403301 | MS.gene38027:CDS |
| AATGTTGCTGCTGACATTCC+TGG | 0.294438 | 5.1:+77399257 | MS.gene38027:CDS |
| TATATGCTGGCCACGCGGGC+GGG | 0.295067 | 5.1:+77403553 | MS.gene38027:CDS |
| GAAGAAGATGAAGGAGGTTC+AGG | 0.311212 | 5.1:-77399299 | None:intergenic |
| CGTGAGTAGGTTTAGATTAA+GGG | 0.323549 | 5.1:+77403902 | MS.gene38027:CDS |
| CATGGTTAAGAGGTTTATTA+GGG | 0.328702 | 5.1:+77403928 | MS.gene38027:CDS |
| CTCGCCTTCGCGAGATTAGA+TGG | 0.334905 | 5.1:+77403393 | MS.gene38027:CDS |
| GCAGGAATGGGCCCGGGTAT+TGG | 0.339605 | 5.1:-77403450 | None:intergenic |
| TCCAACCATGGTCTTCTATT+CGG | 0.353047 | 5.1:+77403324 | MS.gene38027:CDS |
| GTCTACATTGCTATTATTAA+CGG | 0.368557 | 5.1:+77403420 | MS.gene38027:CDS |
| ATAACATATTCTGGTGGGTC+TGG | 0.372539 | 5.1:+77403972 | MS.gene38027:CDS |
| GGCAGCGGCAGATGAGGTTT+TGG | 0.378783 | 5.1:-77403206 | None:intergenic |
| AGCTACTACATATTCTCTTT+CGG | 0.384245 | 5.1:-77403706 | None:intergenic |
| AGGATTCATTGTAGGATCAT+TGG | 0.389444 | 5.1:+77403803 | MS.gene38027:CDS |
| CGTGATGTAGTGTCCATAAC+AGG | 0.395954 | 5.1:+77403783 | MS.gene38027:CDS |
| GGTTTAGATTAAGGGCTTCA+TGG | 0.398867 | 5.1:+77403910 | MS.gene38027:CDS |
| TCAAATATGGGACGCGCAAA+CGG | 0.399150 | 5.1:+77403581 | MS.gene38027:CDS |
| TTCATTAACCGATCCGGAAA+CGG | 0.410471 | 5.1:+77403626 | MS.gene38027:CDS |
| CACCGGGAGACATGCTTTAG+TGG | 0.414725 | 5.1:+77403155 | MS.gene38027:CDS |
| CCCGAAACGGATTGTGAAAA+CGG | 0.417479 | 5.1:-77403348 | None:intergenic |
| TCTACATTGCTATTATTAAC+GGG | 0.418414 | 5.1:+77403421 | MS.gene38027:CDS |
| ACATCACGTAATAGAACCTC+TGG | 0.422231 | 5.1:-77403768 | None:intergenic |
| AGCTTGCACAAGTACAAGAT+TGG | 0.422430 | 5.1:+77403725 | MS.gene38027:CDS |
| ACCGACCGGTTCAACTAATT+CGG | 0.424968 | 5.1:-77403670 | None:intergenic |
| ATATGCTGGCCACGCGGGCG+GGG | 0.425858 | 5.1:+77403554 | MS.gene38027:CDS |
| AGAGGCTCACGAGACGCATC+TGG | 0.428365 | 5.1:+77403058 | MS.gene38027:CDS |
| GTAGCCAATGCTTCAACAAC+AGG | 0.432980 | 5.1:-77399359 | None:intergenic |
| TCCAATTACAATTCCCGAAA+CGG | 0.436742 | 5.1:-77403361 | None:intergenic |
| CGGGCCCATTCCTGCACGAC+GGG | 0.438206 | 5.1:+77403458 | MS.gene38027:CDS |
| GGCTCTAGTCGTTGGTGGGT+TGG | 0.439072 | 5.1:+77403528 | MS.gene38027:CDS |
| TCCTACAATGAATCCTGTTA+TGG | 0.441153 | 5.1:-77403796 | None:intergenic |
| TCTCCCGGTGGTAAAGTTCC+TGG | 0.441224 | 5.1:-77403142 | None:intergenic |
| TCCTTGAACCGTTTCCGGAT+CGG | 0.441558 | 5.1:-77403634 | None:intergenic |
| CCATTAATTGCCCGTCGTGC+AGG | 0.443293 | 5.1:-77403468 | None:intergenic |
| TTAAGGGCTTCATGGTTAAG+AGG | 0.447013 | 5.1:+77403918 | MS.gene38027:CDS |
| AATTGCCCGTCGTGCAGGAA+TGG | 0.458917 | 5.1:-77403463 | None:intergenic |
| ATTGCCCGTCGTGCAGGAAT+GGG | 0.459648 | 5.1:-77403462 | None:intergenic |
| ACCGATCCGGAAACGGTTCA+AGG | 0.460400 | 5.1:+77403633 | MS.gene38027:CDS |
| CCGTCGTGCAGGAATGGGCC+CGG | 0.461152 | 5.1:-77403457 | None:intergenic |
| ATGGGCCCGGGTATTGGTCC+AGG | 0.465999 | 5.1:-77403444 | None:intergenic |
| TGGTGGGTTGGTTTATATGC+TGG | 0.470180 | 5.1:+77403540 | MS.gene38027:CDS |
| TGAACCTGTTGTTGAAGCAT+TGG | 0.473412 | 5.1:+77399355 | MS.gene38027:CDS |
| GTTAACCGAATTAGTTGAAC+CGG | 0.476077 | 5.1:+77403665 | MS.gene38027:CDS |
| TGGCGGTTCATTAACCGATC+CGG | 0.476629 | 5.1:+77403620 | MS.gene38027:CDS |
| ATTGATGCTTCTCATTATCA+TGG | 0.480019 | 5.1:+77399392 | MS.gene38027:CDS |
| TTGCCGGCTCTAGTCGTTGG+TGG | 0.480637 | 5.1:+77403523 | MS.gene38027:CDS |
| TTATATGCTGGCCACGCGGG+CGG | 0.480797 | 5.1:+77403552 | MS.gene38027:CDS |
| CATATTCTCTTTCGGTGACT+CGG | 0.481267 | 5.1:-77403698 | None:intergenic |
| GAGGAAGAAGCAACATCATA+AGG | 0.481607 | 5.1:-77399233 | None:intergenic |
| GTCTGGTTTGTTGAGAGTGT+GGG | 0.482663 | 5.1:+77403989 | MS.gene38027:CDS |
| TGCCGGCTCTAGTCGTTGGT+GGG | 0.484033 | 5.1:+77403524 | MS.gene38027:CDS |
| ATGATAATGAGAAGCATCAA+TGG | 0.484575 | 5.1:-77399390 | None:intergenic |
| CGACGAAGCCGCAGGCGAGG+TGG | 0.487527 | 5.1:-77403245 | None:intergenic |
| GGAGTATTAGTAGAATTTGC+CGG | 0.489467 | 5.1:+77403507 | MS.gene38027:CDS |
| ACGCTCCCAGTTAGAGATGA+TGG | 0.491914 | 5.1:+77404044 | MS.gene38027:CDS |
| ATCTAATCTCGCGAAGGCGA+GGG | 0.494316 | 5.1:-77403391 | None:intergenic |
| CCGAAACGGATTGTGAAAAC+GGG | 0.497568 | 5.1:-77403347 | None:intergenic |
| CATCTAATCTCGCGAAGGCG+AGG | 0.498179 | 5.1:-77403392 | None:intergenic |
| TGATCTCCTGGATCATATTG+TGG | 0.499584 | 5.1:-77403180 | None:intergenic |
| AACGTGCTATGAATGAAGTA+TGG | 0.501621 | 5.1:+77399330 | MS.gene38027:CDS |
| ATTGCTATTATTAACGGGCC+TGG | 0.505158 | 5.1:+77403426 | MS.gene38027:CDS |
| TGTCGGAGAGAGTGAGGCAG+CGG | 0.506671 | 5.1:-77403221 | None:intergenic |
| AATGGTGATGTTGTCAATAA+CGG | 0.506851 | 5.1:+77403486 | MS.gene38027:CDS |
| TCCATAACAGGATTCATTGT+AGG | 0.509536 | 5.1:+77403795 | MS.gene38027:CDS |
| GGAGTAATTGAAGGTGAAGA+TGG | 0.509585 | 5.1:-77399212 | None:intergenic |
| GGTCTGGTTTGTTGAGAGTG+TGG | 0.510453 | 5.1:+77403988 | MS.gene38027:CDS |
| CTTCTCCATCATCTCTAACT+GGG | 0.510502 | 5.1:-77404049 | None:intergenic |
| AACCCACCAACGACTAGAGC+CGG | 0.516179 | 5.1:-77403526 | None:intergenic |
| CTCGCCTGCGGCTTCGTCGA+CGG | 0.523192 | 5.1:+77403249 | MS.gene38027:CDS |
| TGATGAGAAGTGCTAGGGCC+AGG | 0.527006 | 5.1:-77399275 | None:intergenic |
| GAGTGAGGCAGCGGCAGATG+AGG | 0.527259 | 5.1:-77403212 | None:intergenic |
| AACGGGCCTGGACCAATACC+CGG | 0.527802 | 5.1:+77403438 | MS.gene38027:CDS |
| GTTCGGATCTACTGTGGCAG+AGG | 0.528047 | 5.1:+77403040 | MS.gene38027:CDS |
| GACGAAGCCGCAGGCGAGGT+GGG | 0.529764 | 5.1:-77403244 | None:intergenic |
| GGCGCAGAACATATAGATTG+AGG | 0.532902 | 5.1:+77403079 | MS.gene38027:CDS |
| GGCAGTTAGAATACATCTAC+TGG | 0.534095 | 5.1:+77403109 | MS.gene38027:CDS |
| GTGGTCCCACAATATGATCC+AGG | 0.534362 | 5.1:+77403174 | MS.gene38027:CDS |
| GCCGCAGGCGAGGTGGGTGT+CGG | 0.536831 | 5.1:-77403238 | None:intergenic |
| GTGATACACAATCGCGCCGC+AGG | 0.537724 | 5.1:-77404023 | None:intergenic |
| ATGGAGAGAAGTGTCACGTT+CGG | 0.540623 | 5.1:+77403023 | MS.gene38027:CDS |
| TGGTTGTGATGAAGAAGAAG+AGG | 0.543717 | 5.1:-77399192 | None:intergenic |
| GCGCAGAACATATAGATTGA+GGG | 0.543876 | 5.1:+77403080 | MS.gene38027:CDS |
| GATCTCCTGGATCATATTGT+GGG | 0.544786 | 5.1:-77403179 | None:intergenic |
| CGTCGTGCAGGAATGGGCCC+GGG | 0.546050 | 5.1:-77403456 | None:intergenic |
| AATTTGCCGGCTCTAGTCGT+TGG | 0.546832 | 5.1:+77403520 | MS.gene38027:CDS |
| ACGGGCCTGGACCAATACCC+GGG | 0.548519 | 5.1:+77403439 | MS.gene38027:CDS |
| GAACAGCGCGTGTTTATTGG+CGG | 0.548823 | 5.1:+77403603 | MS.gene38027:CDS |
| GTGGTGGAAAGAAGTGGTGT+TGG | 0.551066 | 5.1:+77403849 | MS.gene38027:CDS |
| ATGTTATAACATATTCTGGT+GGG | 0.553968 | 5.1:+77403967 | MS.gene38027:CDS |
| TCAGGTTGATGAGAAGTGCT+AGG | 0.553999 | 5.1:-77399281 | None:intergenic |
| GCCGAATAGAAGACCATGGT+TGG | 0.558339 | 5.1:-77403325 | None:intergenic |
| ACATCATAAGGAGTAATTGA+AGG | 0.563591 | 5.1:-77399221 | None:intergenic |
| TCTACTGGCATCGAACGGCC+AGG | 0.565427 | 5.1:+77403124 | MS.gene38027:CDS |
| TTTGTTGTGGTGGAAAGAAG+TGG | 0.565574 | 5.1:+77403843 | MS.gene38027:CDS |
| TGGCGAGAGGAAGAAGATGA+AGG | 0.567730 | 5.1:-77399308 | None:intergenic |
| GAAGTGGTGTTGGAACTGTT+CGG | 0.568741 | 5.1:+77403859 | MS.gene38027:CDS |
| GGTGGGTGTCGGAGAGAGTG+AGG | 0.568818 | 5.1:-77403227 | None:intergenic |
| CGTCGACGAAGCCGCAGGCG+AGG | 0.570217 | 5.1:-77403248 | None:intergenic |
| GGTTTATATGCTGGCCACGC+GGG | 0.573762 | 5.1:+77403549 | MS.gene38027:CDS |
| GTGACTCGGACTCGACCGAC+CGG | 0.586956 | 5.1:-77403684 | None:intergenic |
| ATCCGGAAACGGTTCAAGGA+TGG | 0.588593 | 5.1:+77403637 | MS.gene38027:CDS |
| GACCACTAAAGCATGTCTCC+CGG | 0.592351 | 5.1:-77403157 | None:intergenic |
| GCATGCAGGTTTGTTCAACA+TGG | 0.597878 | 5.1:+77403004 | MS.gene38027:intron |
| AATGTCAGCAGCAACATTTG+AGG | 0.598135 | 5.1:-77399252 | None:intergenic |
| ACTGCCGTCGACGAAGCCGC+AGG | 0.600288 | 5.1:-77403253 | None:intergenic |
| ACGGCCAGGAACTTTACCAC+CGG | 0.601863 | 5.1:+77403138 | MS.gene38027:CDS |
| ATAATTTCGAGCGCGTGAGT+AGG | 0.604680 | 5.1:+77403889 | MS.gene38027:CDS |
| CGGCCAGGAACTTTACCACC+GGG | 0.607000 | 5.1:+77403139 | MS.gene38027:CDS |
| CAGGTTGATGAGAAGTGCTA+GGG | 0.609841 | 5.1:-77399280 | None:intergenic |
| CCAGTTAGAGATGATGGAGA+AGG | 0.611674 | 5.1:+77404050 | MS.gene38027:CDS |
| GATGGAGAAGGACAAGTACA+TGG | 0.613846 | 5.1:+77404062 | MS.gene38027:CDS |
| TCCGACACCCACCTCGCCTG+CGG | 0.615146 | 5.1:+77403237 | MS.gene38027:CDS |
| ATCTCCATCTAATCTCGCGA+AGG | 0.620003 | 5.1:-77403397 | None:intergenic |
| TATGTTATAACATATTCTGG+TGG | 0.621514 | 5.1:+77403966 | MS.gene38027:CDS |
| ATTCATAGCACGTTGGCGAG+AGG | 0.622029 | 5.1:-77399321 | None:intergenic |
| ATCATTGGATGTTAGCCATG+AGG | 0.625954 | 5.1:+77403818 | MS.gene38027:CDS |
| TGCTAACATGTGCACCGGTG+TGG | 0.634853 | 5.1:-77403293 | None:intergenic |
| TGGTTTATATGCTGGCCACG+CGG | 0.637470 | 5.1:+77403548 | MS.gene38027:CDS |
| ACAAGTACATGGCAATAGCA+TGG | 0.638195 | 5.1:+77404073 | MS.gene38027:CDS |
| CATATAGATTGAGGGACACG+TGG | 0.643287 | 5.1:+77403088 | MS.gene38027:CDS |
| CGGTGTGGAGATCGAAGAGT+CGG | 0.650728 | 5.1:-77403278 | None:intergenic |
| CCGGGCCCATTCCTGCACGA+CGG | 0.655323 | 5.1:+77403457 | MS.gene38027:CDS |
| AAATGTGCTAACATGTGCAC+CGG | 0.656474 | 5.1:-77403298 | None:intergenic |
| ATACATCTACTGGCATCGAA+CGG | 0.658565 | 5.1:+77403119 | MS.gene38027:CDS |
| TTTGAAAAGCCCCGCCCGCG+TGG | 0.661088 | 5.1:-77403563 | None:intergenic |
| CATCACGTAATAGAACCTCT+GGG | 0.662087 | 5.1:-77403767 | None:intergenic |
| CGAGAGGAAGAAGATGAAGG+AGG | 0.662653 | 5.1:-77399305 | None:intergenic |
| CGACTCTTCGATCTCCACAC+CGG | 0.677791 | 5.1:+77403279 | MS.gene38027:CDS |
| ACCGAATTAGTTGAACCGGT+CGG | 0.683053 | 5.1:+77403669 | MS.gene38027:CDS |
| TGTCACGTTCGGATCTACTG+TGG | 0.685634 | 5.1:+77403034 | MS.gene38027:CDS |
| TTTCAACTTAAGAAACCCAG+AGG | 0.687724 | 5.1:+77403752 | MS.gene38027:CDS |
| GTGGGACATACATGAACCTG+CGG | 0.688958 | 5.1:+77404007 | MS.gene38027:CDS |
| CACTAAAGCATGTCTCCCGG+TGG | 0.706707 | 5.1:-77403154 | None:intergenic |
| GGTTGCTAATCAAACTCACG+TGG | 0.706916 | 5.1:+77404094 | MS.gene38027:CDS |
| ACGGGCCGAATAGAAGACCA+TGG | 0.711737 | 5.1:-77403329 | None:intergenic |
| ATACTTCATTCATAGCACGT+TGG | 0.720163 | 5.1:-77399328 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACCTATTTTAAAATTAAA+TGG | - | chr5.1:77401515-77401534 | None:intergenic | 10.0% |
| !!! | AATAATACAAGAAATATTTT+AGG | + | chr5.1:77400900-77400919 | MS.gene38027:intron | 10.0% |
| !!! | AGAGTATTATAATTATATAA+TGG | + | chr5.1:77401322-77401341 | MS.gene38027:intron | 10.0% |
| !!! | TCTTATTATTTTTACATAAA+GGG | - | chr5.1:77399727-77399746 | None:intergenic | 10.0% |
| !!! | TTCTTATTATTTTTACATAA+AGG | - | chr5.1:77399728-77399747 | None:intergenic | 10.0% |
| !!! | TTGATTTTTTTTTTTTTTGA+AGG | + | chr5.1:77400729-77400748 | MS.gene38027:intron | 10.0% |
| !! | AAAAACCAAAATATGATAAT+AGG | + | chr5.1:77402623-77402642 | MS.gene38027:intron | 15.0% |
| !! | AATTATATAATGGCATAAAA+TGG | + | chr5.1:77401332-77401351 | MS.gene38027:intron | 15.0% |
| !! | AATTGCTAATATAATCAAAT+AGG | + | chr5.1:77399517-77399536 | MS.gene38027:intron | 15.0% |
| !! | ATAAAATTTATGATATGATG+TGG | - | chr5.1:77402391-77402410 | None:intergenic | 15.0% |
| !! | ATCATACTATTTAATGTATT+GGG | - | chr5.1:77401468-77401487 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr5.1:77402528-77402547 | None:intergenic | 15.0% |
| !! | TACAAAAAAAAATGTGTATT+TGG | - | chr5.1:77401230-77401249 | None:intergenic | 15.0% |
| !! | TATAATACCAAATGAAAAAA+AGG | - | chr5.1:77400044-77400063 | None:intergenic | 15.0% |
| !! | TATCATACTATTTAATGTAT+TGG | - | chr5.1:77401469-77401488 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5.1:77402529-77402548 | None:intergenic | 15.0% |
| !! | TTATACACAATATATTTACA+TGG | + | chr5.1:77401934-77401953 | MS.gene38027:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr5.1:77402593-77402612 | None:intergenic | 15.0% |
| !!! | AAGAACAATATCTTTTTTAA+GGG | - | chr5.1:77400820-77400839 | None:intergenic | 15.0% |
| !!! | ATTAATATTACTTGTTAGTA+AGG | - | chr5.1:77401724-77401743 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTTTGCATGATA+TGG | + | chr5.1:77402953-77402972 | MS.gene38027:intron | 15.0% |
| !!! | CACTCAATTTTTTTTTTTTA+GGG | - | chr5.1:77401024-77401043 | None:intergenic | 15.0% |
| !!! | GATCCATTTAATTTTAAAAT+AGG | + | chr5.1:77401509-77401528 | MS.gene38027:intron | 15.0% |
| !!! | GTCAATTTTCTATTTAATTT+TGG | + | chr5.1:77402813-77402832 | MS.gene38027:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr5.1:77402594-77402613 | None:intergenic | 15.0% |
| !!! | TAAGAACAATATCTTTTTTA+AGG | - | chr5.1:77400821-77400840 | None:intergenic | 15.0% |
| !!! | TCACTCAATTTTTTTTTTTT+AGG | - | chr5.1:77401025-77401044 | None:intergenic | 15.0% |
| !!! | TTAGTTTCTAAAAACATTTA+AGG | + | chr5.1:77400696-77400715 | MS.gene38027:intron | 15.0% |
| !!! | TTTTTTTTTTTGCATGATAT+GGG | + | chr5.1:77402954-77402973 | MS.gene38027:intron | 15.0% |
| !! | AAAATACTGTTCCTTAAAAA+CGG | + | chr5.1:77399926-77399945 | MS.gene38027:intron | 20.0% |
| !! | AAATGAAAGTGAAATATATG+TGG | + | chr5.1:77402206-77402225 | MS.gene38027:intron | 20.0% |
| !! | AATGAAAGTGAAATATATGT+GGG | + | chr5.1:77402207-77402226 | MS.gene38027:intron | 20.0% |
| !! | ACAAAATAATTCTTCATTGT+TGG | - | chr5.1:77399568-77399587 | None:intergenic | 20.0% |
| !! | ATAATAATATGAAACCAAAC+CGG | - | chr5.1:77400405-77400424 | None:intergenic | 20.0% |
| !! | ATTTCTACGAATATAATCTT+AGG | - | chr5.1:77400498-77400517 | None:intergenic | 20.0% |
| !! | CATTTGGTATTATATGAAAA+AGG | + | chr5.1:77400050-77400069 | MS.gene38027:intron | 20.0% |
| !! | TATCTAATCTAATAAATCCA+TGG | + | chr5.1:77400152-77400171 | MS.gene38027:intron | 20.0% |
| !! | TTTCTACGAATATAATCTTA+GGG | - | chr5.1:77400497-77400516 | None:intergenic | 20.0% |
| !! | TTTCTTAAATAACACAAGAA+GGG | + | chr5.1:77400239-77400258 | MS.gene38027:intron | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr5.1:77402592-77402611 | None:intergenic | 20.0% |
| !!! | CAATGAAAATGTACAATTTT+TGG | + | chr5.1:77400378-77400397 | MS.gene38027:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr5.1:77402459-77402478 | None:intergenic | 20.0% |
| !!! | GATGTTTTTAGATAGAAAAA+AGG | - | chr5.1:77400182-77400201 | None:intergenic | 20.0% |
| !!! | GTTTGAATTGTTATTATTGT+TGG | + | chr5.1:77400761-77400780 | MS.gene38027:intron | 20.0% |
| !!! | TAGAATTGATTCTAATTGAA+GGG | - | chr5.1:77401140-77401159 | None:intergenic | 20.0% |
| !!! | TGAAATATGTCAGTTTTTTT+GGG | - | chr5.1:77402481-77402500 | None:intergenic | 20.0% |
| !!! | TTGAAATATGTCAGTTTTTT+TGG | - | chr5.1:77402482-77402501 | None:intergenic | 20.0% |
| !!! | TTTAAATTGTTTCTTCCTTT+GGG | + | chr5.1:77401966-77401985 | MS.gene38027:intron | 20.0% |
| !!! | TTTTAAATTGTTTCTTCCTT+TGG | + | chr5.1:77401965-77401984 | MS.gene38027:intron | 20.0% |
| !!! | TTTTAGAATTGTGAGTAAAA+TGG | - | chr5.1:77400629-77400648 | None:intergenic | 20.0% |
| !!! | TTTTATTCCCAACTTTTTTT+TGG | + | chr5.1:77400955-77400974 | MS.gene38027:intron | 20.0% |
| !!! | TTTTCTTAAATAACACAAGA+AGG | + | chr5.1:77400238-77400257 | MS.gene38027:intron | 20.0% |
| !!! | TTTTTTTTTAAGAAAGGAGA+CGG | + | chr5.1:77401297-77401316 | MS.gene38027:intron | 20.0% |
| ! | AAATACTCCTTAGTTAAACA+TGG | - | chr5.1:77402267-77402286 | None:intergenic | 25.0% |
| ! | AAATGTGACCTGAAAAATAA+TGG | - | chr5.1:77399444-77399463 | None:intergenic | 25.0% |
| ! | AATACCAAATGAAAAAAAGG+AGG | - | chr5.1:77400041-77400060 | None:intergenic | 25.0% |
| ! | AATAGAAAATTGACTGTTCA+AGG | - | chr5.1:77402807-77402826 | None:intergenic | 25.0% |
| ! | AATATGCATATATATGTGCT+TGG | - | chr5.1:77401572-77401591 | None:intergenic | 25.0% |
| ! | AATATTTCAATGCATACAAG+AGG | - | chr5.1:77401894-77401913 | None:intergenic | 25.0% |
| ! | AATCAAATAGGTCATGTTTA+AGG | + | chr5.1:77399529-77399548 | MS.gene38027:intron | 25.0% |
| ! | AATTGAATGTACCAATGTAT+TGG | - | chr5.1:77399846-77399865 | None:intergenic | 25.0% |
| ! | ACACTATAGAATATGCATAT+AGG | - | chr5.1:77402847-77402866 | None:intergenic | 25.0% |
| ! | ACTAGCATTAGATTAATATG+AGG | - | chr5.1:77402356-77402375 | None:intergenic | 25.0% |
| ! | ATATGCATATATATGTGCTT+GGG | - | chr5.1:77401571-77401590 | None:intergenic | 25.0% |
| ! | ATGAAAGTGAAATATATGTG+GGG | + | chr5.1:77402208-77402227 | MS.gene38027:intron | 25.0% |
| ! | ATGTTATAACATATTCTGGT+GGG | + | chr5.1:77403967-77403986 | MS.gene38027:CDS | 25.0% |
| ! | ATTCTGAATTCAAATCCAAA+AGG | - | chr5.1:77400560-77400579 | None:intergenic | 25.0% |
| ! | ATTCTTCCATAGATAAGATA+TGG | - | chr5.1:77402705-77402724 | None:intergenic | 25.0% |
| ! | ATTGAATGTACCAATGTATT+GGG | - | chr5.1:77399845-77399864 | None:intergenic | 25.0% |
| ! | GAAGATATTCTCAATCAAAA+AGG | - | chr5.1:77402680-77402699 | None:intergenic | 25.0% |
| ! | GTACATTCAATTCAACTAAT+TGG | + | chr5.1:77399854-77399873 | MS.gene38027:intron | 25.0% |
| ! | TAGAATATGCATATAGGTAT+AGG | - | chr5.1:77402841-77402860 | None:intergenic | 25.0% |
| ! | TATAAAAGCCAAAAATCACA+TGG | + | chr5.1:77401372-77401391 | MS.gene38027:intron | 25.0% |
| ! | TATGTTATAACATATTCTGG+TGG | + | chr5.1:77403966-77403985 | MS.gene38027:CDS | 25.0% |
| ! | TCAATTCAACTAATTGGATT+AGG | + | chr5.1:77399860-77399879 | MS.gene38027:intron | 25.0% |
| ! | TCAGAAAATGGACAAATTAT+TGG | + | chr5.1:77399654-77399673 | MS.gene38027:intron | 25.0% |
| ! | TGACTCTTCTATACATTTAT+TGG | + | chr5.1:77404130-77404149 | MS.gene38027:CDS | 25.0% |
| ! | TTAAAAAGCTCAGTCAAAAT+AGG | - | chr5.1:77400113-77400132 | None:intergenic | 25.0% |
| ! | TTCACTTTCATTTCCAATAA+AGG | - | chr5.1:77402199-77402218 | None:intergenic | 25.0% |
| ! | TTTAAAAAGTGAACTACTCT+TGG | + | chr5.1:77401771-77401790 | MS.gene38027:intron | 25.0% |
| ! | TTTCATTTCCAATAAAGGTA+TGG | - | chr5.1:77402194-77402213 | None:intergenic | 25.0% |
| !! | CATGACCTATTATCATATTT+TGG | - | chr5.1:77402631-77402650 | None:intergenic | 25.0% |
| !! | GTAGAATTGATTCTAATTGA+AGG | - | chr5.1:77401141-77401160 | None:intergenic | 25.0% |
| !! | GTCTACATTGCTATTATTAA+CGG | + | chr5.1:77403420-77403439 | MS.gene38027:CDS | 25.0% |
| !! | TAAAACAGTAGAGTACTATA+TGG | - | chr5.1:77400309-77400328 | None:intergenic | 25.0% |
| !! | TCTACATTGCTATTATTAAC+GGG | + | chr5.1:77403421-77403440 | MS.gene38027:CDS | 25.0% |
| !! | TTTAAGGAACAGTATTTTCT+AGG | - | chr5.1:77399924-77399943 | None:intergenic | 25.0% |
| !!! | AAAATGTACAATTTTTGGTC+CGG | + | chr5.1:77400383-77400402 | MS.gene38027:intron | 25.0% |
| !!! | ATTTTGATGTTTACCTTTCT+TGG | + | chr5.1:77400079-77400098 | MS.gene38027:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr5.1:77402460-77402479 | None:intergenic | 25.0% |
| !!! | TGTGTATTTGGTTCTAATTT+TGG | - | chr5.1:77401218-77401237 | None:intergenic | 25.0% |
| AACACAGACCAAAAAAAAGT+TGG | - | chr5.1:77400966-77400985 | None:intergenic | 30.0% | |
| AACATAGGTACAAAAGGAAT+GGG | - | chr5.1:77401423-77401442 | None:intergenic | 30.0% | |
| AAGTTTACTCTTAACACAGT+TGG | + | chr5.1:77401795-77401814 | MS.gene38027:intron | 30.0% | |
| ACACAGACCAAAAAAAAGTT+GGG | - | chr5.1:77400965-77400984 | None:intergenic | 30.0% | |
| ACATCATAAGGAGTAATTGA+AGG | - | chr5.1:77399224-77399243 | None:intergenic | 30.0% | |
| ACATGTGTATTCAATTGACA+GGG | - | chr5.1:77401262-77401281 | None:intergenic | 30.0% | |
| AGCTACTACATATTCTCTTT+CGG | - | chr5.1:77403709-77403728 | None:intergenic | 30.0% | |
| AGTTTACTCTTAACACAGTT+GGG | + | chr5.1:77401796-77401815 | MS.gene38027:intron | 30.0% | |
| ATATTTGTCTTTAGGCTTGT+TGG | + | chr5.1:77402106-77402125 | MS.gene38027:intron | 30.0% | |
| ATTGATGCTTCTCATTATCA+TGG | + | chr5.1:77399392-77399411 | MS.gene38027:CDS | 30.0% | |
| CATGGTTAAGAGGTTTATTA+GGG | + | chr5.1:77403928-77403947 | MS.gene38027:CDS | 30.0% | |
| CTCTAACTAACTATGTAAAG+TGG | - | chr5.1:77400358-77400377 | None:intergenic | 30.0% | |
| GATATTCTCAATCAAAAAGG+AGG | - | chr5.1:77402677-77402696 | None:intergenic | 30.0% | |
| GGGTATGTTATAACATATTC+TGG | + | chr5.1:77403963-77403982 | MS.gene38027:CDS | 30.0% | |
| TAACATAGGTACAAAAGGAA+TGG | - | chr5.1:77401424-77401443 | None:intergenic | 30.0% | |
| TACATGTGTATTCAATTGAC+AGG | - | chr5.1:77401263-77401282 | None:intergenic | 30.0% | |
| TACTCTACCATGTTTAACTA+AGG | + | chr5.1:77402257-77402276 | MS.gene38027:intron | 30.0% | |
| TATGCATATATATGTGCTTG+GGG | - | chr5.1:77401570-77401589 | None:intergenic | 30.0% | |
| TATTAGGGTGCATGAATTTA+GGG | + | chr5.1:77403943-77403962 | MS.gene38027:CDS | 30.0% | |
| TCATGGTTAAGAGGTTTATT+AGG | + | chr5.1:77403927-77403946 | MS.gene38027:CDS | 30.0% | |
| TCTAATGCTAGTATAGACTA+TGG | + | chr5.1:77402364-77402383 | MS.gene38027:intron | 30.0% | |
| TGAGAATAACAAAAACCCAA+AGG | - | chr5.1:77401984-77402003 | None:intergenic | 30.0% | |
| TGAGTAAAATGGCATTATTC+AGG | - | chr5.1:77400618-77400637 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr5.1:77402585-77402604 | None:intergenic | 30.0% | |
| TTAAGGGATTAGAAGATCAA+TGG | - | chr5.1:77400804-77400823 | None:intergenic | 30.0% | |
| TTATTAGGGTGCATGAATTT+AGG | + | chr5.1:77403942-77403961 | MS.gene38027:CDS | 30.0% | |
| ! | AATGGTGATGTTGTCAATAA+CGG | + | chr5.1:77403486-77403505 | MS.gene38027:CDS | 30.0% |
| ! | ACATTTACCCTTTTTGTGAA+AGG | - | chr5.1:77399993-77400012 | None:intergenic | 30.0% |
| ! | ATGGGTCTTGATGTTTTATA+TGG | + | chr5.1:77402972-77402991 | MS.gene38027:intron | 30.0% |
| ! | ATTGGAATCCATGTGATTTT+TGG | - | chr5.1:77401383-77401402 | None:intergenic | 30.0% |
| ! | ATTTTCTGAACTGAAAAAGC+TGG | - | chr5.1:77399643-77399662 | None:intergenic | 30.0% |
| ! | CATTTACCCTTTTTGTGAAA+GGG | - | chr5.1:77399992-77400011 | None:intergenic | 30.0% |
| ! | GTCTTGATGTTTTATATGGT+TGG | + | chr5.1:77402976-77402995 | MS.gene38027:intron | 30.0% |
| ! | TACAAAAGTGCATTTATCGA+AGG | + | chr5.1:77401677-77401696 | MS.gene38027:intron | 30.0% |
| ! | TAGAGTACTATATGGTAGAA+AGG | - | chr5.1:77400301-77400320 | None:intergenic | 30.0% |
| ! | TCAGAATAGTACTCACATTT+TGG | + | chr5.1:77400573-77400592 | MS.gene38027:intron | 30.0% |
| ! | TGCTTAATTTTACCACGAAT+GGG | - | chr5.1:77400667-77400686 | None:intergenic | 30.0% |
| ! | TTTTCTTGTATGTTCTGTCT+TGG | + | chr5.1:77400014-77400033 | MS.gene38027:intron | 30.0% |
| !! | AAGTTGATAGATTCTCTTGT+TGG | + | chr5.1:77402150-77402169 | MS.gene38027:intron | 30.0% |
| !! | ATGATAATGAGAAGCATCAA+TGG | - | chr5.1:77399393-77399412 | None:intergenic | 30.0% |
| !! | GCTTTTTACTTTGTTTCAGA+AGG | + | chr5.1:77400211-77400230 | MS.gene38027:intron | 30.0% |
| !!! | ACTTTTTTTTGGTCTGTGTT+AGG | + | chr5.1:77400966-77400985 | MS.gene38027:intron | 30.0% |
| !!! | AGCTTTTTCAGTTCAGAAAA+TGG | + | chr5.1:77399642-77399661 | MS.gene38027:intron | 30.0% |
| !!! | CTTAAAAACGGCTACTTTTA+AGG | + | chr5.1:77399938-77399957 | MS.gene38027:intron | 30.0% |
| !!! | CTTAAAAGTAGCCGTTTTTA+AGG | - | chr5.1:77399940-77399959 | None:intergenic | 30.0% |
| !!! | GTATTTGGTTCTAATTTTGG+AGG | - | chr5.1:77401215-77401234 | None:intergenic | 30.0% |
| AAAGGGACACACATTTAGTT+TGG | - | chr5.1:77399975-77399994 | None:intergenic | 35.0% | |
| AACGTGCTATGAATGAAGTA+TGG | + | chr5.1:77399330-77399349 | MS.gene38027:CDS | 35.0% | |
| AATTAGCTAGAGAAAAGCTG+TGG | - | chr5.1:77400467-77400486 | None:intergenic | 35.0% | |
| ACATAGGTACAAAAGGAATG+GGG | - | chr5.1:77401422-77401441 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr5.1:77402446-77402465 | None:intergenic | 35.0% | |
| AGGAAAGTCTGCACATAAAA+TGG | + | chr5.1:77400920-77400939 | MS.gene38027:intron | 35.0% | |
| AGGATTCATTGTAGGATCAT+TGG | + | chr5.1:77403803-77403822 | MS.gene38027:CDS | 35.0% | |
| ATACTTCATTCATAGCACGT+TGG | - | chr5.1:77399331-77399350 | None:intergenic | 35.0% | |
| ATAGGATTTCATGCCAAGAA+AGG | - | chr5.1:77400095-77400114 | None:intergenic | 35.0% | |
| ATGACCGGATATTTGTCTTT+AGG | + | chr5.1:77402098-77402117 | MS.gene38027:intron | 35.0% | |
| ATGCATATATATGTGCTTGG+GGG | - | chr5.1:77401569-77401588 | None:intergenic | 35.0% | |
| ATTCGTAGAAATCTGCAGTT+GGG | + | chr5.1:77400506-77400525 | MS.gene38027:intron | 35.0% | |
| CAAGCCTAAAGACAAATATC+CGG | - | chr5.1:77402105-77402124 | None:intergenic | 35.0% | |
| CGTGAGTAGGTTTAGATTAA+GGG | + | chr5.1:77403902-77403921 | MS.gene38027:CDS | 35.0% | |
| CTATGTTAGAAGCTCTCATT+GGG | + | chr5.1:77401436-77401455 | MS.gene38027:intron | 35.0% | |
| CTGAATTCAAATCCAAAAGG+TGG | - | chr5.1:77400557-77400576 | None:intergenic | 35.0% | |
| CTTCCACCATATCTTATCTA+TGG | + | chr5.1:77402696-77402715 | MS.gene38027:intron | 35.0% | |
| CTTCCATAGATAAGATATGG+TGG | - | chr5.1:77402702-77402721 | None:intergenic | 35.0% | |
| GAACTTTAGACCCAATACAT+TGG | + | chr5.1:77399832-77399851 | MS.gene38027:intron | 35.0% | |
| GCTTCTAACATAGGTACAAA+AGG | - | chr5.1:77401429-77401448 | None:intergenic | 35.0% | |
| GTTAACCGAATTAGTTGAAC+CGG | + | chr5.1:77403665-77403684 | MS.gene38027:CDS | 35.0% | |
| TATTCGTAGAAATCTGCAGT+TGG | + | chr5.1:77400505-77400524 | MS.gene38027:intron | 35.0% | |
| TCAATCAAAAAGGAGGTAGT+TGG | - | chr5.1:77402670-77402689 | None:intergenic | 35.0% | |
| TCCAATTACAATTCCCGAAA+CGG | - | chr5.1:77403364-77403383 | None:intergenic | 35.0% | |
| TCCATAACAGGATTCATTGT+AGG | + | chr5.1:77403795-77403814 | MS.gene38027:CDS | 35.0% | |
| TCCTACAATGAATCCTGTTA+TGG | - | chr5.1:77403799-77403818 | None:intergenic | 35.0% | |
| TCTTAACACAGTTGGGTTTA+GGG | + | chr5.1:77401803-77401822 | MS.gene38027:intron | 35.0% | |
| TTTCAACTTAAGAAACCCAG+AGG | + | chr5.1:77403752-77403771 | MS.gene38027:CDS | 35.0% | |
| ! | ACAGCTTTTCTCTAGCTAAT+TGG | + | chr5.1:77400466-77400485 | MS.gene38027:intron | 35.0% |
| ! | ATTGCTACTCCTTTAGAAGA+TGG | + | chr5.1:77402038-77402057 | MS.gene38027:intron | 35.0% |
| ! | GGAGTATTAGTAGAATTTGC+CGG | + | chr5.1:77403507-77403526 | MS.gene38027:CDS | 35.0% |
| ! | GTAGAGTATCACAAAAGCTA+TGG | - | chr5.1:77402245-77402264 | None:intergenic | 35.0% |
| ! | GTGCTTAATTTTACCACGAA+TGG | - | chr5.1:77400668-77400687 | None:intergenic | 35.0% |
| ! | TTCCAATAAAGGTATGGTCA+AGG | - | chr5.1:77402188-77402207 | None:intergenic | 35.0% |
| ! | TTGCTACTCCTTTAGAAGAT+GGG | + | chr5.1:77402039-77402058 | MS.gene38027:intron | 35.0% |
| !! | TGCTCTTGCCATTATTTTTC+AGG | + | chr5.1:77399433-77399452 | MS.gene38027:CDS | 35.0% |
| !!! | AAAAACGGCTACTTTTAAGG+CGG | + | chr5.1:77399941-77399960 | MS.gene38027:intron | 35.0% |
| !!! | TGGACCTCCTTTTTTTCATT+TGG | + | chr5.1:77400034-77400053 | MS.gene38027:intron | 35.0% |
| AAATGTGCTAACATGTGCAC+CGG | - | chr5.1:77403301-77403320 | None:intergenic | 40.0% | |
| AATGTCAGCAGCAACATTTG+AGG | - | chr5.1:77399255-77399274 | None:intergenic | 40.0% | |
| ACAAGTACATGGCAATAGCA+TGG | + | chr5.1:77404073-77404092 | MS.gene38027:CDS | 40.0% | |
| ACATCACGTAATAGAACCTC+TGG | - | chr5.1:77403771-77403790 | None:intergenic | 40.0% | |
| AGCCTTGACCATACCTTTAT+TGG | + | chr5.1:77402183-77402202 | MS.gene38027:intron | 40.0% | |
| AGCTTGCACAAGTACAAGAT+TGG | + | chr5.1:77403725-77403744 | MS.gene38027:CDS | 40.0% | |
| ATCATTGGATGTTAGCCATG+AGG | + | chr5.1:77403818-77403837 | MS.gene38027:CDS | 40.0% | |
| ATGTTGTGTTCCCATTCAGA+GGG | - | chr5.1:77402782-77402801 | None:intergenic | 40.0% | |
| CATATTCTCTTTCGGTGACT+CGG | - | chr5.1:77403701-77403720 | None:intergenic | 40.0% | |
| CATCACGTAATAGAACCTCT+GGG | - | chr5.1:77403770-77403789 | None:intergenic | 40.0% | |
| CATGTAGCAAGAAAGATGAC+CGG | + | chr5.1:77402083-77402102 | MS.gene38027:intron | 40.0% | |
| CCAATGAGAGCTTCTAACAT+AGG | - | chr5.1:77401438-77401457 | None:intergenic | 40.0% | |
| CCTATGTTAGAAGCTCTCAT+TGG | + | chr5.1:77401435-77401454 | MS.gene38027:intron | 40.0% | |
| CTCTTAACACAGTTGGGTTT+AGG | + | chr5.1:77401802-77401821 | MS.gene38027:intron | 40.0% | |
| CTTCTCCATCATCTCTAACT+GGG | - | chr5.1:77404052-77404071 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr5.1:77402445-77402464 | None:intergenic | 40.0% | |
| GAGGAAGAAGCAACATCATA+AGG | - | chr5.1:77399236-77399255 | None:intergenic | 40.0% | |
| GATAGAAAAAAGGCAAGCCA+TGG | - | chr5.1:77400172-77400191 | None:intergenic | 40.0% | |
| GATCTCCTGGATCATATTGT+GGG | - | chr5.1:77403182-77403201 | None:intergenic | 40.0% | |
| GCGCAGAACATATAGATTGA+GGG | + | chr5.1:77403080-77403099 | MS.gene38027:CDS | 40.0% | |
| GCGTGAGTAGGTTTAGATTA+AGG | + | chr5.1:77403901-77403920 | MS.gene38027:CDS | 40.0% | |
| GGAGTAATTGAAGGTGAAGA+TGG | - | chr5.1:77399215-77399234 | None:intergenic | 40.0% | |
| GGCAGTTAGAATACATCTAC+TGG | + | chr5.1:77403109-77403128 | MS.gene38027:CDS | 40.0% | |
| GGTATTGTCAAGGCAAGAAT+TGG | - | chr5.1:77401401-77401420 | None:intergenic | 40.0% | |
| GGTTTAGATTAAGGGCTTCA+TGG | + | chr5.1:77403910-77403929 | MS.gene38027:CDS | 40.0% | |
| GTAGAATCATTACCCATTCG+TGG | + | chr5.1:77400652-77400671 | MS.gene38027:intron | 40.0% | |
| GTGTGTCCCTTTCACAAAAA+GGG | + | chr5.1:77399983-77400002 | MS.gene38027:intron | 40.0% | |
| TATGGTTGGAAAATGCATGC+AGG | + | chr5.1:77402990-77403009 | MS.gene38027:intron | 40.0% | |
| TCCAACCATGGTCTTCTATT+CGG | + | chr5.1:77403324-77403343 | MS.gene38027:CDS | 40.0% | |
| TCCGTTTCGGGAATTGTAAT+TGG | + | chr5.1:77403360-77403379 | MS.gene38027:CDS | 40.0% | |
| TGAACCTGTTGTTGAAGCAT+TGG | + | chr5.1:77399355-77399374 | MS.gene38027:CDS | 40.0% | |
| TGATCTCCTGGATCATATTG+TGG | - | chr5.1:77403183-77403202 | None:intergenic | 40.0% | |
| TGCATATATATGTGCTTGGG+GGG | - | chr5.1:77401568-77401587 | None:intergenic | 40.0% | |
| TGGTTGTGATGAAGAAGAAG+AGG | - | chr5.1:77399195-77399214 | None:intergenic | 40.0% | |
| TGTGTGTCCCTTTCACAAAA+AGG | + | chr5.1:77399982-77400001 | MS.gene38027:intron | 40.0% | |
| TTAAGGGCTTCATGGTTAAG+AGG | + | chr5.1:77403918-77403937 | MS.gene38027:CDS | 40.0% | |
| TTCATTAACCGATCCGGAAA+CGG | + | chr5.1:77403626-77403645 | MS.gene38027:CDS | 40.0% | |
| ! | ATAACATATTCTGGTGGGTC+TGG | + | chr5.1:77403972-77403991 | MS.gene38027:CDS | 40.0% |
| ! | ATACATCTACTGGCATCGAA+CGG | + | chr5.1:77403119-77403138 | MS.gene38027:CDS | 40.0% |
| ! | ATTGCTATTATTAACGGGCC+TGG | + | chr5.1:77403426-77403445 | MS.gene38027:CDS | 40.0% |
| ! | GTGCACATGTTAGCACATTT+TGG | + | chr5.1:77403301-77403320 | MS.gene38027:CDS | 40.0% |
| ! | TAGCCATGAGGTTTTTGTTG+TGG | + | chr5.1:77403830-77403849 | MS.gene38027:CDS | 40.0% |
| ! | TAGTGGTTAGATCCACCTTT+TGG | + | chr5.1:77400542-77400561 | MS.gene38027:intron | 40.0% |
| ! | TGCTACTCCTTTAGAAGATG+GGG | + | chr5.1:77402040-77402059 | MS.gene38027:intron | 40.0% |
| ! | TTGGTCTGTGTTAGGTTTTG+CGG | + | chr5.1:77400974-77400993 | MS.gene38027:intron | 40.0% |
| ! | TTTGTTGTGGTGGAAAGAAG+TGG | + | chr5.1:77403843-77403862 | MS.gene38027:CDS | 40.0% |
| !! | AAAGGAATGGGGTATTGTCA+AGG | - | chr5.1:77401411-77401430 | None:intergenic | 40.0% |
| !! | TTGTCTTTAGGCTTGTTGGA+GGG | + | chr5.1:77402110-77402129 | MS.gene38027:intron | 40.0% |
| !! | TTTGTCTTTAGGCTTGTTGG+AGG | + | chr5.1:77402109-77402128 | MS.gene38027:intron | 40.0% |
| !!! | AAAACGGCTACTTTTAAGGC+GGG | + | chr5.1:77399942-77399961 | MS.gene38027:intron | 40.0% |
| !!! | GTACAATTTTTGGTCCGGTT+TGG | + | chr5.1:77400388-77400407 | MS.gene38027:intron | 40.0% |
| AAGGAGGTAGTTGGATGAGA+TGG | - | chr5.1:77402661-77402680 | None:intergenic | 45.0% | |
| AATGTTGCTGCTGACATTCC+TGG | + | chr5.1:77399257-77399276 | MS.gene38027:CDS | 45.0% | |
| ACCGAATTAGTTGAACCGGT+CGG | + | chr5.1:77403669-77403688 | MS.gene38027:CDS | 45.0% | |
| ATAATTTCGAGCGCGTGAGT+AGG | + | chr5.1:77403889-77403908 | MS.gene38027:CDS | 45.0% | |
| ATCTCCATCTAATCTCGCGA+AGG | - | chr5.1:77403400-77403419 | None:intergenic | 45.0% | |
| CATATAGATTGAGGGACACG+TGG | + | chr5.1:77403088-77403107 | MS.gene38027:CDS | 45.0% | |
| CCACCACAACAAAAACCTCA+TGG | - | chr5.1:77403836-77403855 | None:intergenic | 45.0% | |
| CCATCAACCCCATCTTCTAA+AGG | - | chr5.1:77402050-77402069 | None:intergenic | 45.0% | |
| CCTTCTCCATCATCTCTAAC+TGG | - | chr5.1:77404053-77404072 | None:intergenic | 45.0% | |
| CGTGATGTAGTGTCCATAAC+AGG | + | chr5.1:77403783-77403802 | MS.gene38027:CDS | 45.0% | |
| GAAGAAGATGAAGGAGGTTC+AGG | - | chr5.1:77399302-77399321 | None:intergenic | 45.0% | |
| GATGGAGAAGGACAAGTACA+TGG | + | chr5.1:77404062-77404081 | MS.gene38027:CDS | 45.0% | |
| GATGTTGTGTTCCCATTCAG+AGG | - | chr5.1:77402783-77402802 | None:intergenic | 45.0% | |
| GGCGCAGAACATATAGATTG+AGG | + | chr5.1:77403079-77403098 | MS.gene38027:CDS | 45.0% | |
| GGTTGCTAATCAAACTCACG+TGG | + | chr5.1:77404094-77404113 | MS.gene38027:CDS | 45.0% | |
| GTAGAAATCTGCAGTTGGGT+TGG | + | chr5.1:77400510-77400529 | MS.gene38027:intron | 45.0% | |
| GTAGCCAATGCTTCAACAAC+AGG | - | chr5.1:77399362-77399381 | None:intergenic | 45.0% | |
| GTATCTGCGTATATCTCTGC+AGG | - | chr5.1:77399705-77399724 | None:intergenic | 45.0% | |
| TCAAATATGGGACGCGCAAA+CGG | + | chr5.1:77403581-77403600 | MS.gene38027:CDS | 45.0% | |
| ! | ACCGACCGGTTCAACTAATT+CGG | - | chr5.1:77403673-77403692 | None:intergenic | 45.0% |
| ! | CCCGTTTTCACAATCCGTTT+CGG | + | chr5.1:77403347-77403366 | MS.gene38027:CDS | 45.0% |
| ! | CCGTTTTCACAATCCGTTTC+GGG | + | chr5.1:77403348-77403367 | MS.gene38027:CDS | 45.0% |
| ! | CCTTTAGAAGATGGGGTTGA+TGG | + | chr5.1:77402047-77402066 | MS.gene38027:intron | 45.0% |
| ! | GAAGTGGTGTTGGAACTGTT+CGG | + | chr5.1:77403859-77403878 | MS.gene38027:CDS | 45.0% |
| ! | GCATGCAGGTTTGTTCAACA+TGG | + | chr5.1:77403004-77403023 | MS.gene38027:intron | 45.0% |
| !! | AATCTGCAGTTGGGTTGGAT+CGG | + | chr5.1:77400515-77400534 | MS.gene38027:intron | 45.0% |
| !! | AGCACATTTTGGTCCAACCA+TGG | + | chr5.1:77403312-77403331 | MS.gene38027:CDS | 45.0% |
| !! | ATGGAGAGAAGTGTCACGTT+CGG | + | chr5.1:77403023-77403042 | MS.gene38027:CDS | 45.0% |
| !! | CAGGTTGATGAGAAGTGCTA+GGG | - | chr5.1:77399283-77399302 | None:intergenic | 45.0% |
| !! | CCAGTTAGAGATGATGGAGA+AGG | + | chr5.1:77404050-77404069 | MS.gene38027:CDS | 45.0% |
| !! | CCATGAGGTTTTTGTTGTGG+TGG | + | chr5.1:77403833-77403852 | MS.gene38027:CDS | 45.0% |
| !! | CCCGAAACGGATTGTGAAAA+CGG | - | chr5.1:77403351-77403370 | None:intergenic | 45.0% |
| !! | CCGAAACGGATTGTGAAAAC+GGG | - | chr5.1:77403350-77403369 | None:intergenic | 45.0% |
| !! | GTCTGGTTTGTTGAGAGTGT+GGG | + | chr5.1:77403989-77404008 | MS.gene38027:CDS | 45.0% |
| !! | TCAGGTTGATGAGAAGTGCT+AGG | - | chr5.1:77399284-77399303 | None:intergenic | 45.0% |
| !! | TGGGGTTGATGGTTTGTTAG+TGG | + | chr5.1:77402058-77402077 | MS.gene38027:intron | 45.0% |
| !! | TGGTGGGTTGGTTTATATGC+TGG | + | chr5.1:77403540-77403559 | MS.gene38027:CDS | 45.0% |
| !! | TGTCTTTAGGCTTGTTGGAG+GGG | + | chr5.1:77402111-77402130 | MS.gene38027:intron | 45.0% |
| !!! | ATAATTTTTTTTTTTAAGAA+AGG | + | chr5.1:77401291-77401310 | MS.gene38027:intron | 5.0% |
| !!! | TATAAAAATAATATTTCTTT+TGG | + | chr5.1:77399766-77399785 | MS.gene38027:intron | 5.0% |
| AATCGCACCTTCCCTCTGAA+TGG | + | chr5.1:77402768-77402787 | MS.gene38027:intron | 50.0% | |
| ACGCTCCCAGTTAGAGATGA+TGG | + | chr5.1:77404044-77404063 | MS.gene38027:CDS | 50.0% | |
| ACGGAACAGCGCGTGTTTAT+TGG | + | chr5.1:77403600-77403619 | MS.gene38027:CDS | 50.0% | |
| ATCCGGAAACGGTTCAAGGA+TGG | + | chr5.1:77403637-77403656 | MS.gene38027:CDS | 50.0% | |
| ATCGCACCTTCCCTCTGAAT+GGG | + | chr5.1:77402769-77402788 | MS.gene38027:intron | 50.0% | |
| ATCTAATCTCGCGAAGGCGA+GGG | - | chr5.1:77403394-77403413 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr5.1:77402441-77402460 | None:intergenic | 50.0% | |
| ATTCATAGCACGTTGGCGAG+AGG | - | chr5.1:77399324-77399343 | None:intergenic | 50.0% | |
| ATTGTATACTCCCTCCGTCC+CGG | + | chr5.1:77402424-77402443 | MS.gene38027:intron | 50.0% | |
| CACAAAAGCTATGGCTAGCG+TGG | - | chr5.1:77402236-77402255 | None:intergenic | 50.0% | |
| CGAGAGGAAGAAGATGAAGG+AGG | - | chr5.1:77399308-77399327 | None:intergenic | 50.0% | |
| GAACAGCGCGTGTTTATTGG+CGG | + | chr5.1:77403603-77403622 | MS.gene38027:CDS | 50.0% | |
| GCCGAATAGAAGACCATGGT+TGG | - | chr5.1:77403328-77403347 | None:intergenic | 50.0% | |
| GTGGGACATACATGAACCTG+CGG | + | chr5.1:77404007-77404026 | MS.gene38027:CDS | 50.0% | |
| TCCTTGAACCGTTTCCGGAT+CGG | - | chr5.1:77403637-77403656 | None:intergenic | 50.0% | |
| TGCCATCCTTGAACCGTTTC+CGG | - | chr5.1:77403642-77403661 | None:intergenic | 50.0% | |
| TGGCGAGAGGAAGAAGATGA+AGG | - | chr5.1:77399311-77399330 | None:intergenic | 50.0% | |
| TGGCGGTTCATTAACCGATC+CGG | + | chr5.1:77403620-77403639 | MS.gene38027:CDS | 50.0% | |
| TGGTTTATATGCTGGCCACG+CGG | + | chr5.1:77403548-77403567 | MS.gene38027:CDS | 50.0% | |
| TGTCACGTTCGGATCTACTG+TGG | + | chr5.1:77403034-77403053 | MS.gene38027:CDS | 50.0% | |
| TGTGTTCCCATTCAGAGGGA+AGG | - | chr5.1:77402778-77402797 | None:intergenic | 50.0% | |
| ! | GGGCGGGGCTTTTCAAATAT+GGG | + | chr5.1:77403569-77403588 | MS.gene38027:CDS | 50.0% |
| ! | GTGGTGGAAAGAAGTGGTGT+TGG | + | chr5.1:77403849-77403868 | MS.gene38027:CDS | 50.0% |
| ! | TGGGTTGGATCGGGTAATAG+TGG | + | chr5.1:77400525-77400544 | MS.gene38027:intron | 50.0% |
| !! | AATTTGCCGGCTCTAGTCGT+TGG | + | chr5.1:77403520-77403539 | MS.gene38027:CDS | 50.0% |
| !! | ATCTGCAGTTGGGTTGGATC+GGG | + | chr5.1:77400516-77400535 | MS.gene38027:intron | 50.0% |
| !! | GGTCTGGTTTGTTGAGAGTG+TGG | + | chr5.1:77403988-77404007 | MS.gene38027:CDS | 50.0% |
| !!! | AGGTTTTGGTGGTGATCTCC+TGG | - | chr5.1:77403195-77403214 | None:intergenic | 50.0% |
| AACCCACCAACGACTAGAGC+CGG | - | chr5.1:77403529-77403548 | None:intergenic | 55.0% | |
| AATTGCCCGTCGTGCAGGAA+TGG | - | chr5.1:77403466-77403485 | None:intergenic | 55.0% | |
| ACCGATCCGGAAACGGTTCA+AGG | + | chr5.1:77403633-77403652 | MS.gene38027:CDS | 55.0% | |
| ACGGCCAGGAACTTTACCAC+CGG | + | chr5.1:77403138-77403157 | MS.gene38027:CDS | 55.0% | |
| ACGGGCCGAATAGAAGACCA+TGG | - | chr5.1:77403332-77403351 | None:intergenic | 55.0% | |
| ATTGCCCGTCGTGCAGGAAT+GGG | - | chr5.1:77403465-77403484 | None:intergenic | 55.0% | |
| CACCGGGAGACATGCTTTAG+TGG | + | chr5.1:77403155-77403174 | MS.gene38027:CDS | 55.0% | |
| CACTAAAGCATGTCTCCCGG+TGG | - | chr5.1:77403157-77403176 | None:intergenic | 55.0% | |
| CATCTAATCTCGCGAAGGCG+AGG | - | chr5.1:77403395-77403414 | None:intergenic | 55.0% | |
| CCATTAATTGCCCGTCGTGC+AGG | - | chr5.1:77403471-77403490 | None:intergenic | 55.0% | |
| CCTGCACGACGGGCAATTAA+TGG | + | chr5.1:77403468-77403487 | MS.gene38027:CDS | 55.0% | |
| CGACTCTTCGATCTCCACAC+CGG | + | chr5.1:77403279-77403298 | MS.gene38027:CDS | 55.0% | |
| CGGTGTGGAGATCGAAGAGT+CGG | - | chr5.1:77403281-77403300 | None:intergenic | 55.0% | |
| CTCGCCTTCGCGAGATTAGA+TGG | + | chr5.1:77403393-77403412 | MS.gene38027:CDS | 55.0% | |
| GGTTTATATGCTGGCCACGC+GGG | + | chr5.1:77403549-77403568 | MS.gene38027:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr5.1:77402437-77402456 | None:intergenic | 55.0% | |
| GTTCGGATCTACTGTGGCAG+AGG | + | chr5.1:77403040-77403059 | MS.gene38027:CDS | 55.0% | |
| TCTCCCGGTGGTAAAGTTCC+TGG | - | chr5.1:77403145-77403164 | None:intergenic | 55.0% | |
| ! | CGGGCGGGGCTTTTCAAATA+TGG | + | chr5.1:77403568-77403587 | MS.gene38027:CDS | 55.0% |
| ! | TGCTAACATGTGCACCGGTG+TGG | - | chr5.1:77403296-77403315 | None:intergenic | 55.0% |
| !! | AGCGGCAGATGAGGTTTTGG+TGG | - | chr5.1:77403206-77403225 | None:intergenic | 55.0% |
| !! | TGATGAGAAGTGCTAGGGCC+AGG | - | chr5.1:77399278-77399297 | None:intergenic | 55.0% |
| AACGGGCCTGGACCAATACC+CGG | + | chr5.1:77403438-77403457 | MS.gene38027:CDS | 60.0% | |
| AGAGGCTCACGAGACGCATC+TGG | + | chr5.1:77403058-77403077 | MS.gene38027:CDS | 60.0% | |
| CGGCCAGGAACTTTACCACC+GGG | + | chr5.1:77403139-77403158 | MS.gene38027:CDS | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr5.1:77402438-77402457 | None:intergenic | 60.0% | |
| GTGATACACAATCGCGCCGC+AGG | - | chr5.1:77404026-77404045 | None:intergenic | 60.0% | |
| TGTCGGAGAGAGTGAGGCAG+CGG | - | chr5.1:77403224-77403243 | None:intergenic | 60.0% | |
| TTATATGCTGGCCACGCGGG+CGG | + | chr5.1:77403552-77403571 | MS.gene38027:CDS | 60.0% | |
| ! | GGCAGCGGCAGATGAGGTTT+TGG | - | chr5.1:77403209-77403228 | None:intergenic | 60.0% |
| ! | GGCTCTAGTCGTTGGTGGGT+TGG | + | chr5.1:77403528-77403547 | MS.gene38027:CDS | 60.0% |
| ! | TCTACTGGCATCGAACGGCC+AGG | + | chr5.1:77403124-77403143 | MS.gene38027:CDS | 60.0% |
| !! | TGCCGGCTCTAGTCGTTGGT+GGG | + | chr5.1:77403524-77403543 | MS.gene38027:CDS | 60.0% |
| !! | TTGCCGGCTCTAGTCGTTGG+TGG | + | chr5.1:77403523-77403542 | MS.gene38027:CDS | 60.0% |
| ACGGGCCTGGACCAATACCC+GGG | + | chr5.1:77403439-77403458 | MS.gene38027:CDS | 65.0% | |
| GAGTGAGGCAGCGGCAGATG+AGG | - | chr5.1:77403215-77403234 | None:intergenic | 65.0% | |
| GCAGGAATGGGCCCGGGTAT+TGG | - | chr5.1:77403453-77403472 | None:intergenic | 65.0% | |
| TATATGCTGGCCACGCGGGC+GGG | + | chr5.1:77403553-77403572 | MS.gene38027:CDS | 65.0% | |
| TTTGAAAAGCCCCGCCCGCG+TGG | - | chr5.1:77403566-77403585 | None:intergenic | 65.0% | |
| ! | GTGACTCGGACTCGACCGAC+CGG | - | chr5.1:77403687-77403706 | None:intergenic | 65.0% |
| !! | ATGGGCCCGGGTATTGGTCC+AGG | - | chr5.1:77403447-77403466 | None:intergenic | 65.0% |
| !! | GGTGGGTGTCGGAGAGAGTG+AGG | - | chr5.1:77403230-77403249 | None:intergenic | 65.0% |
| ACTGCCGTCGACGAAGCCGC+AGG | - | chr5.1:77403256-77403275 | None:intergenic | 70.0% | |
| ATATGCTGGCCACGCGGGCG+GGG | + | chr5.1:77403554-77403573 | MS.gene38027:CDS | 70.0% | |
| CCGGGCCCATTCCTGCACGA+CGG | + | chr5.1:77403457-77403476 | MS.gene38027:CDS | 70.0% | |
| CCGTCGTGCAGGAATGGGCC+CGG | - | chr5.1:77403460-77403479 | None:intergenic | 70.0% | |
| CGGGCCCATTCCTGCACGAC+GGG | + | chr5.1:77403458-77403477 | MS.gene38027:CDS | 70.0% | |
| CGTCGTGCAGGAATGGGCCC+GGG | - | chr5.1:77403459-77403478 | None:intergenic | 70.0% | |
| CTCGCCTGCGGCTTCGTCGA+CGG | + | chr5.1:77403249-77403268 | MS.gene38027:CDS | 70.0% | |
| GACGAAGCCGCAGGCGAGGT+GGG | - | chr5.1:77403247-77403266 | None:intergenic | 70.0% | |
| TCCGACACCCACCTCGCCTG+CGG | + | chr5.1:77403237-77403256 | MS.gene38027:CDS | 70.0% | |
| CGACGAAGCCGCAGGCGAGG+TGG | - | chr5.1:77403248-77403267 | None:intergenic | 75.0% | |
| CGTCGACGAAGCCGCAGGCG+AGG | - | chr5.1:77403251-77403270 | None:intergenic | 75.0% | |
| GCCGCAGGCGAGGTGGGTGT+CGG | - | chr5.1:77403241-77403260 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 77399179 | 77404169 | 77399179 | ID=MS.gene38027 |
| chr5.1 | mRNA | 77399179 | 77404169 | 77399179 | ID=MS.gene38027.t1;Parent=MS.gene38027 |
| chr5.1 | exon | 77399179 | 77399454 | 77399179 | ID=MS.gene38027.t1.exon1;Parent=MS.gene38027.t1 |
| chr5.1 | CDS | 77399179 | 77399454 | 77399179 | ID=cds.MS.gene38027.t1;Parent=MS.gene38027.t1 |
| chr5.1 | exon | 77403012 | 77404169 | 77403012 | ID=MS.gene38027.t1.exon2;Parent=MS.gene38027.t1 |
| chr5.1 | CDS | 77403012 | 77404169 | 77403012 | ID=cds.MS.gene38027.t1;Parent=MS.gene38027.t1 |
| Gene Sequence |
| Protein sequence |
