AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38120.t1 MTR_1g114070 73.742 994 148 13 1 908 1 967 0.0 1365
MS.gene38120.t1 MTR_1g114130 54.827 1067 308 18 1 908 1 1052 0.0 1048
MS.gene38120.t1 MTR_1g114150 65.469 779 214 8 164 893 284 1056 0.0 1028
MS.gene38120.t1 MTR_1g069565 57.370 882 286 10 98 893 10 887 0.0 992
MS.gene38120.t1 MTR_5g065200 61.609 758 233 6 174 890 97 837 0.0 931
MS.gene38120.t1 MTR_1g069565 52.290 939 301 13 98 893 10 944 0.0 922
MS.gene38120.t1 MTR_1g114150 62.991 662 190 8 164 776 284 939 0.0 829
MS.gene38120.t1 MTR_5g047620 60.542 664 211 10 272 888 139 798 0.0 787
MS.gene38120.t1 MTR_0020s0100 57.552 629 219 10 272 870 81 691 0.0 707
MS.gene38120.t1 MTR_2g024270 43.058 713 330 12 214 885 140 817 0.0 547
MS.gene38120.t1 MTR_4g132540 41.655 737 312 15 227 885 168 864 0.0 545
MS.gene38120.t1 MTR_2g024140 42.511 701 314 14 226 885 33 685 2.16e-172 517
MS.gene38120.t1 MTR_1g083120 34.652 733 390 14 217 886 186 892 1.93e-134 426
MS.gene38120.t1 MTR_1g083120 34.652 733 390 14 217 886 203 909 5.52e-134 425
MS.gene38120.t1 MTR_7g117445 40.630 603 293 13 174 716 77 674 1.05e-131 417
MS.gene38120.t1 MTR_7g117445 64.045 89 32 0 738 826 777 865 1.77e-31 133
MS.gene38120.t1 MTR_7g117445 40.630 603 293 13 174 716 77 674 3.01e-131 417
MS.gene38120.t1 MTR_7g117445 62.162 148 56 0 738 885 777 924 3.30e-55 207
MS.gene38120.t1 MTR_7g117445 40.630 603 293 13 174 716 77 674 3.33e-131 417
MS.gene38120.t1 MTR_7g117445 62.162 148 56 0 738 885 777 924 3.67e-55 207
MS.gene38120.t1 MTR_7g117445 40.630 603 293 13 174 716 77 674 8.55e-131 417
MS.gene38120.t1 MTR_7g117445 62.162 148 56 0 738 885 777 924 3.78e-55 207
MS.gene38120.t1 MTR_1g008060 45.010 511 248 12 224 712 858 1357 4.65e-116 390
MS.gene38120.t1 MTR_1g008060 66.912 136 45 0 741 876 1542 1677 4.76e-53 202
MS.gene38120.t1 MTR_1g008060 45.010 511 248 12 224 712 867 1366 4.98e-116 390
MS.gene38120.t1 MTR_1g008060 66.912 136 45 0 741 876 1551 1686 4.91e-53 202
MS.gene38120.t1 MTR_1g083120 33.382 686 367 15 217 838 186 845 1.81e-114 370
MS.gene38120.t1 MTR_1g083120 33.630 675 359 14 217 828 186 834 5.43e-114 369
MS.gene38120.t1 MTR_2g011630 30.993 755 416 13 227 884 207 953 3.33e-110 362
MS.gene38120.t1 MTR_2g011630 32.632 665 364 11 290 877 45 702 2.36e-105 343
MS.gene38120.t1 MTR_2g011630 32.632 665 364 11 290 877 77 734 8.16e-105 342
MS.gene38120.t1 MTR_2g024240 52.104 309 136 3 542 850 92 388 1.53e-100 319
MS.gene38120.t1 MTR_8g062940 48.588 354 136 4 227 553 33 367 4.33e-100 317
MS.gene38120.t1 MTR_4g091520 34.950 598 285 15 374 886 699 1277 6.41e-98 334
MS.gene38120.t1 MTR_4g091520 30.857 175 92 4 227 373 260 433 1.33e-19 95.5
MS.gene38120.t1 MTR_5g098590 84.768 151 23 0 60 210 1 151 3.02e-78 251
MS.gene38120.t1 MTR_4g091520 38.393 336 182 10 374 702 699 1016 2.14e-58 218
MS.gene38120.t1 MTR_4g091520 30.857 175 92 4 227 373 260 433 1.19e-19 95.5
MS.gene38120.t1 MTR_4g091520 38.393 336 182 10 374 702 664 981 2.29e-58 218
MS.gene38120.t1 MTR_4g091520 30.857 175 92 4 227 373 260 433 1.13e-19 95.5
MS.gene38120.t1 MTR_4g091520 37.798 336 184 9 374 702 629 946 2.65e-58 218
MS.gene38120.t1 MTR_4g091520 30.857 175 92 4 227 373 260 433 1.22e-19 95.5
MS.gene38120.t1 MTR_0295s0020 58.537 164 61 1 565 728 22 178 4.35e-56 191
MS.gene38120.t1 MTR_8g465700 51.685 178 82 1 499 676 4 177 4.42e-52 184
MS.gene38120.t1 MTR_8g465720 69.318 88 26 1 741 828 53 139 9.86e-37 136
MS.gene38120.t1 MTR_8g013920 65.517 87 26 2 589 675 40 122 5.46e-30 118
MS.gene38120.t1 MTR_6g051900 45.087 173 53 7 1 162 1 142 4.33e-22 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38120.t1 AT1G11950 46.066 699 314 11 227 885 193 868 0.0 596
MS.gene38120.t1 AT1G11950 46.066 699 314 11 227 885 193 868 0.0 596
MS.gene38120.t1 AT1G62310 45.706 687 322 9 227 874 209 883 0.0 583
MS.gene38120.t1 AT3G07610 53.722 497 207 4 400 889 415 895 1.73e-171 526
MS.gene38120.t1 AT3G07610 31.908 304 169 7 120 387 32 333 8.30e-37 150
MS.gene38120.t1 AT3G07610 51.744 516 210 5 400 889 415 917 5.17e-164 507
MS.gene38120.t1 AT3G07610 31.908 304 169 7 120 387 32 333 7.86e-37 150
MS.gene38120.t1 AT1G11950 43.829 632 292 11 227 818 193 801 8.08e-164 499
MS.gene38120.t1 AT4G00990 43.249 511 250 10 226 704 79 581 4.12e-120 384
MS.gene38120.t1 AT4G00990 56.364 110 44 1 725 834 673 778 4.03e-31 131
MS.gene38120.t1 AT4G00990 43.249 511 250 10 226 704 79 581 4.23e-120 384
MS.gene38120.t1 AT4G00990 59.804 102 37 1 725 826 673 770 7.69e-31 130
MS.gene38120.t1 AT4G00990 43.249 511 250 10 226 704 79 581 1.14e-119 384
MS.gene38120.t1 AT4G00990 59.627 161 61 1 725 885 673 829 2.23e-54 204
MS.gene38120.t1 AT1G09060 31.300 754 405 20 203 886 195 905 6.59e-108 355
MS.gene38120.t1 AT1G09060 31.300 754 405 20 203 886 195 905 6.59e-108 355
MS.gene38120.t1 AT1G09060 31.300 754 405 20 203 886 181 891 6.82e-108 355
MS.gene38120.t1 AT1G09060 31.300 754 405 20 203 886 181 891 6.82e-108 355
MS.gene38120.t1 AT3G07610 54.122 279 123 1 400 678 415 688 1.51e-88 299
MS.gene38120.t1 AT3G07610 31.908 304 169 7 120 387 32 333 5.02e-37 150
MS.gene38120.t1 AT4G21430 27.876 739 440 14 222 900 222 927 3.29e-85 293

Find 213 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATTCCTCTGAACTTAATT+TGG 0.160479 5.1:-79271432 None:intergenic
GCCTCCTTCTGATTTATTTC+AGG 0.172247 5.1:+79273517 MS.gene38120:CDS
GGACTTGTGGAACCTCATTT+TGG 0.208763 5.1:-79271394 None:intergenic
ACATCACTCTCATTCAATTT+AGG 0.211861 5.1:-79271702 None:intergenic
TCGTCAGGAATGGGTTCTTC+TGG 0.213802 5.1:-79270855 None:intergenic
CTTTATATATTCCTTCAATT+TGG 0.229259 5.1:-79274389 None:intergenic
GATACATACTCGATCTTAAT+TGG 0.230110 5.1:-79272366 None:intergenic
ACCCCTTAGAAGGTGCTATC+TGG 0.241380 5.1:+79274341 MS.gene38120:CDS
TGACATTCATTATCGGCTTT+TGG 0.263135 5.1:-79272468 None:intergenic
AGCACCTTGAGCAAGATAAA+AGG 0.269490 5.1:+79274236 MS.gene38120:CDS
GGATTTGTATATTCTTTATA+AGG 0.271748 5.1:-79273581 None:intergenic
AGTACATTGCTGACAATTAC+AGG 0.278275 5.1:-79272780 None:intergenic
TTCTAAATACGATGAAGTTT+TGG 0.278404 5.1:+79272869 MS.gene38120:CDS
ATCCCAGATAGCACCTTCTA+AGG 0.283008 5.1:-79274344 None:intergenic
CTCCGTGGTGGGAAGCTTCT+AGG 0.287089 5.1:+79272333 MS.gene38120:CDS
CCCTTACCATTTGTTCAAAC+AGG 0.304071 5.1:-79271537 None:intergenic
AATGCACGCCACATGACTTT+TGG 0.316385 5.1:-79272831 None:intergenic
GGAATGGGTTCTTCTGGGTC+TGG 0.322740 5.1:-79270849 None:intergenic
CTCGACTTCCTCATCATTGT+TGG 0.339463 5.1:-79271905 None:intergenic
CAACCTTGCTGTGAAGTTGC+CGG 0.339593 5.1:+79273619 MS.gene38120:CDS
AAAAGGGAGCTAGTTGGTTA+TGG 0.357001 5.1:+79274253 MS.gene38120:CDS
AACTTCATCGTATTTAGAAT+TGG 0.357620 5.1:-79272865 None:intergenic
ATGCTCCATAGTCAGATAAA+TGG 0.360391 5.1:-79274707 None:intergenic
TATGGATTTGCTCATGATCT+TGG 0.362682 5.1:+79273686 MS.gene38120:CDS
GTTGAATAACGGTGAAAATT+CGG 0.370609 5.1:+79271040 MS.gene38120:CDS
GCATACCCTGTTTGAACAAA+TGG 0.372456 5.1:+79271531 MS.gene38120:CDS
ATAACATCGGCGTTACTAAC+AGG 0.373933 5.1:-79272630 None:intergenic
TCATACCATTTATCTGACTA+TGG 0.374732 5.1:+79274702 MS.gene38120:CDS
GTCGCAAGGATTGGCGCAAT+TGG 0.374765 5.1:+79273468 MS.gene38120:CDS
AAAGGGAGCTAGTTGGTTAT+GGG 0.379755 5.1:+79274254 MS.gene38120:CDS
ACTCGTGAGTGGTCAAGATC+TGG 0.380477 5.1:+79272411 MS.gene38120:CDS
TTTGTCTCTCCTGAAAATAT+TGG 0.381247 5.1:+79275348 MS.gene38120:CDS
TAGAGGAGACTTGTGATAAT+AGG 0.385192 5.1:+79272592 MS.gene38120:CDS
TTGGCGGATCTGTGATTTAT+CGG 0.388855 5.1:-79275408 None:intergenic
GTTGGAGGGGACCCCTTAGA+AGG 0.401130 5.1:+79274331 MS.gene38120:CDS
CGTCAGGAATGGGTTCTTCT+GGG 0.401897 5.1:-79270854 None:intergenic
AGGTTGAGAGAACCGCTAAA+AGG 0.407496 5.1:-79273602 None:intergenic
ATGAAACTTAAGGAGGAGTA+TGG 0.411899 5.1:+79274733 MS.gene38120:CDS
TTCAATGGCACTGGAGCAAA+GGG 0.413215 5.1:+79272754 MS.gene38120:CDS
GAAGTATCCTTCTCATTTCA+AGG 0.417000 5.1:-79272500 None:intergenic
GGAGCATAAGATGAAACTTA+AGG 0.419575 5.1:+79274723 MS.gene38120:CDS
AATGTACTTGAATGTACATC+TGG 0.421952 5.1:+79272795 MS.gene38120:CDS
GAATGGGTTCTTCTGGGTCT+GGG 0.422717 5.1:-79270848 None:intergenic
CTCCCGCGTTTCTTTCTCTC+CGG 0.425830 5.1:-79271344 None:intergenic
ACAGATTTCTATACTGTCCT+AGG 0.426836 5.1:+79272697 MS.gene38120:CDS
AGGCTGTTAATTACATAGAT+TGG 0.427002 5.1:+79272898 MS.gene38120:CDS
ATTGAATAACGGTGAAGGTT+CGG 0.432919 5.1:+79270923 MS.gene38120:CDS
GAATGTTGGCGCCGCTGAAA+CGG 0.433221 5.1:+79270896 MS.gene38120:CDS
ACCATGATGACATTCATTAT+CGG 0.447505 5.1:-79272475 None:intergenic
AATGTACATCTGGTTTAAGC+TGG 0.447849 5.1:+79272805 MS.gene38120:CDS
AGGCTCTTCATCATTTCAAC+CGG 0.452508 5.1:+79271325 MS.gene38120:CDS
TTCAACGACGCAGTTTCAGC+AGG 0.452822 5.1:-79271023 None:intergenic
TAAATGGTATGATCATGAAT+GGG 0.458309 5.1:-79274691 None:intergenic
TTCCTCAGTTAAAGCTGCTA+TGG 0.461163 5.1:+79271193 MS.gene38120:CDS
TCTTCCACATTTAAGACGGT+TGG 0.461419 5.1:+79271954 MS.gene38120:CDS
AATATCCACCAATTCTTCAC+TGG 0.461911 5.1:+79273434 MS.gene38120:CDS
GCTGTTGACGGACGATGAAA+TGG 0.463517 5.1:+79271157 MS.gene38120:CDS
ATAAGGAATACCTTGTCTCT+TGG 0.463609 5.1:-79272010 None:intergenic
GTTGTTAGTGAGCAGAATAA+AGG 0.465943 5.1:+79271280 MS.gene38120:CDS
TTACCTTCAGATTTCTGACT+TGG 0.467821 5.1:-79274924 None:intergenic
GTAGGGAGTGTTTCATCGTC+AGG 0.467985 5.1:-79270870 None:intergenic
CTAAAGATGAGCGTGTGATC+TGG 0.471996 5.1:+79272143 MS.gene38120:CDS
GCACCTTGAGCAAGATAAAA+GGG 0.472017 5.1:+79274237 MS.gene38120:CDS
ACACAAGGGGTCGCAAGGAT+TGG 0.472118 5.1:+79273459 MS.gene38120:CDS
TCTTTCAATTTCAACACCTC+AGG 0.472947 5.1:-79273491 None:intergenic
CCCCTTAGAAGGTGCTATCT+GGG 0.478828 5.1:+79274342 MS.gene38120:CDS
TTAATGACAGTAATTTCCTC+AGG 0.479065 5.1:-79274199 None:intergenic
TTAAGTTTCTTGTGGACTTG+TGG 0.481350 5.1:-79271407 None:intergenic
AGTGTTTCATCGTCAGGAAT+GGG 0.481567 5.1:-79270864 None:intergenic
ATTTGGTATTAAGTTTCTTG+TGG 0.482774 5.1:-79271415 None:intergenic
CAACAGCGACTCCACCGTAT+TGG 0.485762 5.1:-79271141 None:intergenic
ATAAATGGTATGATCATGAA+TGG 0.486755 5.1:-79274692 None:intergenic
GAGTGTTTCATCGTCAGGAA+TGG 0.486924 5.1:-79270865 None:intergenic
GACCTCAAACTTGTCCTTGG+CGG 0.487327 5.1:-79275424 None:intergenic
TTGTGTAACCAGTGAAGAAT+TGG 0.496636 5.1:-79273442 None:intergenic
TCAATGTAAAAGAAGTGATA+CGG 0.498201 5.1:+79271466 MS.gene38120:CDS
TACGGTGGAGTCGCTGTTGA+CGG 0.498655 5.1:+79271145 MS.gene38120:CDS
TTGCTCATGATCTTGGACGT+GGG 0.502037 5.1:+79273693 MS.gene38120:CDS
CGGACGATGAAATGGCAGCT+AGG 0.502074 5.1:+79271165 MS.gene38120:CDS
ATTTGGTTACATCCTCTCTC+CGG 0.503256 5.1:-79274372 None:intergenic
TCCCAGATAGCACCTTCTAA+GGG 0.503286 5.1:-79274343 None:intergenic
TCGTAACTTGGAAGTACCTA+TGG 0.504745 5.1:+79276259 MS.gene38120:CDS
ACTATAGGAAATGAAGCATA+AGG 0.507232 5.1:+79271876 MS.gene38120:intron
AGGTGTTGAAATTGAAAGAT+TGG 0.508050 5.1:+79273495 MS.gene38120:CDS
TCAGGCTTTAAACAATAATC+CGG 0.508635 5.1:-79273638 None:intergenic
GGACGATGAAATGGCAGCTA+GGG 0.509416 5.1:+79271166 MS.gene38120:CDS
TGGCTATAAGGTAAATGTGT+TGG 0.509638 5.1:+79274150 MS.gene38120:intron
AGATCTGGGTGGCATGCAAA+TGG 0.510153 5.1:+79272426 MS.gene38120:CDS
GAGAAAGAGAAAAGCGGAGA+AGG 0.511730 5.1:+79271364 MS.gene38120:CDS
GATAGTGACTTGGTGGTTGG+AGG 0.512169 5.1:+79274316 MS.gene38120:CDS
AGAGGATGTAACCAAATTGA+AGG 0.514954 5.1:+79274378 MS.gene38120:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 5.1:+79272753 MS.gene38120:CDS
TGCGTTTAAGTATCGTAACT+TGG 0.516773 5.1:+79276247 MS.gene38120:CDS
ACTAACTCGGAGATGCAATT+CGG 0.516957 5.1:-79272525 None:intergenic
GACTTGCAGGAATTGAACCT+TGG 0.517043 5.1:+79274848 MS.gene38120:intron
GTAAAAGAAGTGATACGGGC+AGG 0.518828 5.1:+79271471 MS.gene38120:CDS
GCGGCGCCAACATTCAAAGT+AGG 0.520480 5.1:-79270888 None:intergenic
TGTATATTCTTTATAAGGCA+AGG 0.521531 5.1:-79273576 None:intergenic
CTCGTGAGTGGTCAAGATCT+GGG 0.525734 5.1:+79272412 MS.gene38120:CDS
TATGAATCTTGGTGCCAATA+CGG 0.529389 5.1:+79271127 MS.gene38120:CDS
CTGCTGGTAGTTAGCACCAT+AGG 0.530400 5.1:-79276275 None:intergenic
TGAAGAACAAATGATTGAGA+AGG 0.530667 5.1:+79271978 MS.gene38120:CDS
ATCTGTGATTTATCGGAAGC+CGG 0.530939 5.1:-79275401 None:intergenic
GGTGAAAATTCGGTTGAAGC+TGG 0.533484 5.1:+79271050 MS.gene38120:CDS
ATGTTCACATTAGCAACTGC+TGG 0.536139 5.1:-79276291 None:intergenic
ACAGCACACAGGACATGCTT+CGG 0.536929 5.1:-79271727 None:intergenic
CCTTACCATTTGTTCAAACA+GGG 0.538038 5.1:-79271536 None:intergenic
ATCCGCCAAGGACAAGTTTG+AGG 0.538260 5.1:+79275422 MS.gene38120:CDS
ACAGACCTCAAACTTGTCCT+TGG 0.538417 5.1:-79275427 None:intergenic
TTGAAATGATGAAGAGCCTC+CGG 0.538715 5.1:-79271321 None:intergenic
GCTAGTTGGTTATGGGGAGG+CGG 0.540172 5.1:+79274261 MS.gene38120:CDS
GCCGATAATGAATGTCATCA+TGG 0.542022 5.1:+79272474 MS.gene38120:CDS
CGGCGCCAACATTCAAAGTA+GGG 0.545175 5.1:-79270887 None:intergenic
GGTGAAGGTTCGGTTGAAGC+TGG 0.546251 5.1:+79270933 MS.gene38120:CDS
ATGGTTTCCTTGAAATGAGA+AGG 0.547108 5.1:+79272493 MS.gene38120:CDS
ACTTGGTGAGGCAAGCCAGC+GGG 0.547254 5.1:-79274907 None:intergenic
ACACTCCCTACTTTGAATGT+TGG 0.548991 5.1:+79270882 MS.gene38120:CDS
TCATCCAACCGTCTTAAATG+TGG 0.550657 5.1:-79271958 None:intergenic
CAATGTAAAAGAAGTGATAC+GGG 0.550923 5.1:+79271467 MS.gene38120:CDS
TTTGCTCATGATCTTGGACG+TGG 0.556810 5.1:+79273692 MS.gene38120:CDS
GAAAATGTCTTAAATCTCCA+TGG 0.559521 5.1:-79272734 None:intergenic
GAAACTGCGTCGTTGAATAA+CGG 0.560168 5.1:+79271029 MS.gene38120:CDS
TGTTGTTGCGAGCTCCGTGG+TGG 0.562600 5.1:+79272321 MS.gene38120:CDS
TTCAGATTTCTGACTTGGTG+AGG 0.565040 5.1:-79274919 None:intergenic
GTTGTTGCGAGCTCCGTGGT+GGG 0.565282 5.1:+79272322 MS.gene38120:CDS
GACTTCTTCCACATTTAAGA+CGG 0.566290 5.1:+79271950 MS.gene38120:CDS
ATGTACATCTGGTTTAAGCT+GGG 0.567172 5.1:+79272806 MS.gene38120:CDS
TATTGTTTAAAGCCTGACAT+GGG 0.567740 5.1:+79273644 MS.gene38120:CDS
GAAGAAAGAGACTTGGTAGC+CGG 0.571229 5.1:+79271302 MS.gene38120:CDS
TGGTGTAGATCTACAGCCCT+AGG 0.571725 5.1:-79272714 None:intergenic
TTCTTCACTGGTTACACAAG+GGG 0.572201 5.1:+79273446 MS.gene38120:CDS
TTCTCTAAGTATATGCTGAA+AGG 0.574255 5.1:+79271928 MS.gene38120:CDS
CACTAATGATAGTGACTTGG+TGG 0.574412 5.1:+79274309 MS.gene38120:CDS
CAAGATAAAAGGGAGCTAGT+TGG 0.574795 5.1:+79274247 MS.gene38120:CDS
TTTACATTGATGGCACGCTA+AGG 0.575795 5.1:-79271453 None:intergenic
TTATTGTTTAAAGCCTGACA+TGG 0.576650 5.1:+79273643 MS.gene38120:CDS
AAATTGCAGTCCTTTAAAGC+AGG 0.577294 5.1:+79274438 MS.gene38120:CDS
TGCTCATGATCTTGGACGTG+GGG 0.579297 5.1:+79273694 MS.gene38120:CDS
CGTTCCTGAAATAAATCAGA+AGG 0.580684 5.1:-79273521 None:intergenic
TGTAACCAGTGAAGAATTGG+TGG 0.581894 5.1:-79273439 None:intergenic
TGTGTTATTGTGTATAACAT+CGG 0.582130 5.1:-79272643 None:intergenic
TGGTTACACAAGGGGTCGCA+AGG 0.582867 5.1:+79273454 MS.gene38120:CDS
GTTGGCGCATATCGCTAAAG+TGG 0.586598 5.1:+79274168 MS.gene38120:CDS
CTCCATAGCAGCTTTAACTG+AGG 0.586676 5.1:-79271195 None:intergenic
GAAGGAATCCACCCAAAATG+AGG 0.587016 5.1:+79271382 MS.gene38120:CDS
AGAAATTCAGAAGAGGAAGA+TGG 0.587534 5.1:+79271247 MS.gene38120:CDS
GTTTGCTTTACATACTAACT+CGG 0.595572 5.1:-79272538 None:intergenic
AATTAAGCTTCAAGATGTAG+AGG 0.596112 5.1:+79272575 MS.gene38120:CDS
AACAGATTCTTCTGCTACTG+CGG 0.596943 5.1:-79271084 None:intergenic
TCATCTTTAGAATGATCCAC+CGG 0.597336 5.1:-79272130 None:intergenic
TAATACCAAATTAAGTTCAG+AGG 0.597446 5.1:+79271427 MS.gene38120:CDS
AATGATAGTGACTTGGTGGT+TGG 0.597880 5.1:+79274313 MS.gene38120:CDS
ATAGTGACTTGGTGGTTGGA+GGG 0.599154 5.1:+79274317 MS.gene38120:CDS
ATTCAATGACGCCGTTTCAG+CGG 0.599511 5.1:-79270907 None:intergenic
GAAAGAGAAGCCAAGAGACA+AGG 0.600316 5.1:+79272000 MS.gene38120:CDS
CACCTAGAAGCTTCCCACCA+CGG 0.601702 5.1:-79272335 None:intergenic
TAAAAGAAGTGATACGGGCA+GGG 0.602379 5.1:+79271472 MS.gene38120:CDS
GAAACGGCGTCATTGAATAA+CGG 0.603965 5.1:+79270912 MS.gene38120:CDS
CAACCACATTTCAATGGCAG+AGG 0.604476 5.1:+79270770 None:intergenic
AGCTTCTGAATAAAAGTCCA+AGG 0.609535 5.1:-79274865 None:intergenic
TCAACGACGCAGTTTCAGCA+GGG 0.610163 5.1:-79271022 None:intergenic
AATAAAGGAAGAAAGAGACT+TGG 0.615827 5.1:+79271295 MS.gene38120:CDS
CAGATTTCTATACTGTCCTA+GGG 0.617894 5.1:+79272698 MS.gene38120:CDS
CGCAACAACAGAGGAGACAA+AGG 0.621015 5.1:-79272308 None:intergenic
AACCGGAGAGAAAGAAACGC+GGG 0.621363 5.1:+79271342 MS.gene38120:CDS
AATTCTTCACTGGTTACACA+AGG 0.621883 5.1:+79273444 MS.gene38120:CDS
AGCAGACTCTTCTGTTGCTG+CGG 0.625900 5.1:-79270967 None:intergenic
TAGTGACTTGGTGGTTGGAG+GGG 0.631450 5.1:+79274318 MS.gene38120:CDS
CACGGAGCTCGCAACAACAG+AGG 0.634726 5.1:-79272317 None:intergenic
ACGAGTCTACGACTCGTGAG+TGG 0.637239 5.1:+79272400 MS.gene38120:CDS
AGAGGAGACAAAGGTCAAAG+TGG 0.637369 5.1:-79272299 None:intergenic
TTCGGTTGAAGCTGGTGATG+TGG 0.638000 5.1:+79270941 MS.gene38120:CDS
TCACCAAGTCAGAAATCTGA+AGG 0.640211 5.1:+79274921 MS.gene38120:CDS
CAGCATCAAACACATTACAA+TGG 0.641448 5.1:-79273733 None:intergenic
TGACACTAATGATAGTGACT+TGG 0.641602 5.1:+79274306 MS.gene38120:CDS
TTCGGTTGAAGCTGGTGATG+TGG 0.643106 5.1:+79271058 MS.gene38120:CDS
GGTCGAAACCAACAATGATG+AGG 0.644580 5.1:+79271897 MS.gene38120:CDS
CTCTGTTGTTGCGAGCTCCG+TGG 0.650643 5.1:+79272318 MS.gene38120:CDS
TCCTGAAATAAATCAGAAGG+AGG 0.651303 5.1:-79273518 None:intergenic
GGGTGGCATGCAAATGGCGA+TGG 0.651622 5.1:+79272432 MS.gene38120:CDS
GACTTGGTGAGGCAAGCCAG+CGG 0.651967 5.1:-79274908 None:intergenic
GCGTCATTGAATAACGGTGA+AGG 0.653749 5.1:+79270918 MS.gene38120:CDS
ATTGTTTAAAGCCTGACATG+GGG 0.653779 5.1:+79273645 MS.gene38120:CDS
CGTGGTGGGAAGCTTCTAGG+TGG 0.655278 5.1:+79272336 MS.gene38120:CDS
AAGGGAGCTAGTTGGTTATG+GGG 0.655659 5.1:+79274255 MS.gene38120:CDS
CCCAGATAGCACCTTCTAAG+GGG 0.660498 5.1:-79274342 None:intergenic
GAATCTTGGTGCCAATACGG+TGG 0.660922 5.1:+79271130 MS.gene38120:CDS
GAAAGAGACTTGGTAGCCGG+AGG 0.664595 5.1:+79271305 MS.gene38120:CDS
AATCCGGCAACTTCACAGCA+AGG 0.666731 5.1:-79273622 None:intergenic
ATTCTTCACTGGTTACACAA+GGG 0.667170 5.1:+79273445 MS.gene38120:CDS
ACGCGGGAGAAAGAGAAAAG+CGG 0.667642 5.1:+79271358 MS.gene38120:CDS
GATAAATCACAGATCCGCCA+AGG 0.668186 5.1:+79275410 MS.gene38120:CDS
GTTTGACAGAGGAATTCCGC+CGG 0.671961 5.1:+79275382 MS.gene38120:CDS
GCATAAGATGAAACTTAAGG+AGG 0.673984 5.1:+79274726 MS.gene38120:CDS
AACTCGGAGATGCAATTCGG+AGG 0.675073 5.1:-79272522 None:intergenic
TAATTACATAGATTGGTGTG+AGG 0.677356 5.1:+79272905 MS.gene38120:CDS
GGATTGGCGCAATTGGCCTG+AGG 0.678244 5.1:+79273475 MS.gene38120:CDS
GCTGGGAACCAAAAGTCATG+TGG 0.680165 5.1:+79272823 MS.gene38120:CDS
GGAGCTAGTTGGTTATGGGG+AGG 0.683456 5.1:+79274258 MS.gene38120:CDS
AAATGGTATGATCATGAATG+GGG 0.688068 5.1:-79274690 None:intergenic
GGTTGAAGCTGGTGATGTGG+CGG 0.688900 5.1:+79271061 MS.gene38120:CDS
CGAGTATGTATCACAGACTG+AGG 0.691844 5.1:+79272377 MS.gene38120:CDS
TAAAGTGGAACTGAAACCTG+AGG 0.692071 5.1:+79274183 MS.gene38120:CDS
ATGAAGTCAGCATGATGACG+AGG 0.692339 5.1:-79273548 None:intergenic
TGAGTGCTTGCGTTTGACAG+AGG 0.693789 5.1:+79275371 MS.gene38120:CDS
TATACACAATAACACAACGA+AGG 0.705122 5.1:+79272650 MS.gene38120:CDS
CAACCGGAGAGAAAGAAACG+CGG 0.707826 5.1:+79271341 MS.gene38120:CDS
TGTGATTTATCGGAAGCCGG+CGG 0.708974 5.1:-79275398 None:intergenic
TTACAGGTCTGAGAAAACCA+AGG 0.720333 5.1:+79276051 MS.gene38120:intron
AGGGCTGTAGATCTACACCA+TGG 0.725512 5.1:+79272717 MS.gene38120:CDS
GCTATGGAGATAATGAAACG+CGG 0.761604 5.1:+79271209 MS.gene38120:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 5.1:+79272755 MS.gene38120:CDS
GTGAGTGGTCAAGATCTGGG+TGG 0.774532 5.1:+79272415 MS.gene38120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATTTTAAAATTTGATATT+CGG + chr5.1:79272065-79272084 MS.gene38120:intron 10.0%
!! ATGAAAATAACTAAGTAATA+TGG + chr5.1:79275519-79275538 MS.gene38120:intron 15.0%
!! ATTTCTAAATTTATGATGAA+GGG + chr5.1:79272936-79272955 MS.gene38120:intron 15.0%
!!! ATAATAACAGTAAAATCTTT+TGG - chr5.1:79273835-79273854 None:intergenic 15.0%
!!! TAATTTCATAATTTGATTTG+TGG + chr5.1:79274010-79274029 MS.gene38120:intron 15.0%
!!! TGATATTAACTATGTTTTTT+TGG + chr5.1:79271660-79271679 MS.gene38120:intron 15.0%
!!! TGTATTCTTATCTTTTAAAT+TGG + chr5.1:79273203-79273222 MS.gene38120:intron 15.0%
!! AAATGATTTGATCATTCAAA+TGG + chr5.1:79274797-79274816 MS.gene38120:intron 20.0%
!! ATAAACTGCAAAGTATATTT+AGG + chr5.1:79274083-79274102 MS.gene38120:intron 20.0%
!! ATGATTGTGATTAAATTTAC+AGG + chr5.1:79276035-79276054 MS.gene38120:intron 20.0%
!! CCAATTACACTAAAAAAAAT+TGG - chr5.1:79273086-79273105 None:intergenic 20.0%
!! CTTTATATATTCCTTCAATT+TGG - chr5.1:79274392-79274411 None:intergenic 20.0%
!! GAAAAACTCAAATAATTAAG+AGG - chr5.1:79273794-79273813 None:intergenic 20.0%
!! GATTTCTAAATTTATGATGA+AGG + chr5.1:79272935-79272954 MS.gene38120:intron 20.0%
!! GGATTTGTATATTCTTTATA+AGG - chr5.1:79273584-79273603 None:intergenic 20.0%
!! TGTATATTTGAATCTTAACT+CGG - chr5.1:79274569-79274588 None:intergenic 20.0%
!! TTGAAAAATTAGAGAAAGAA+AGG + chr5.1:79275860-79275879 MS.gene38120:CDS 20.0%
!! TTTCTAAATTTATGATGAAG+GGG + chr5.1:79272937-79272956 MS.gene38120:intron 20.0%
!!! ATTTAGAATTGGTTTTTTGA+CGG - chr5.1:79272857-79272876 None:intergenic 20.0%
!!! CATATGATTAGTTTCTTATT+TGG - chr5.1:79275566-79275585 None:intergenic 20.0%
!!! CCAATTTTTTTTAGTGTAAT+TGG + chr5.1:79273083-79273102 MS.gene38120:intron 20.0%
!!! CTAAATTTTAGTAGATTGTT+TGG + chr5.1:79275096-79275115 MS.gene38120:intron 20.0%
!!! GTTCCATATTTTGTTTTAAA+TGG + chr5.1:79276173-79276192 MS.gene38120:intron 20.0%
!!! TAATAATTTGCAACTTTTCA+AGG + chr5.1:79275123-79275142 MS.gene38120:intron 20.0%
!!! TTAAAAAGTGCATAATTTGT+AGG + chr5.1:79273870-79273889 MS.gene38120:intron 20.0%
!!! TTCTGCTTTTTCTATTTATT+AGG + chr5.1:79275472-79275491 MS.gene38120:intron 20.0%
!!! TTTTCTATTATCTAGCTTTA+TGG + chr5.1:79274479-79274498 MS.gene38120:intron 20.0%
! AAATGAACAGATAAATGCAT+TGG - chr5.1:79273920-79273939 None:intergenic 25.0%
! AACAATTTGCAAGAAATCAT+AGG - chr5.1:79275199-79275218 None:intergenic 25.0%
! AACTATTATTCATTACAAGC+TGG - chr5.1:79274616-79274635 None:intergenic 25.0%
! AAGATTTCATACATTCAACA+AGG - chr5.1:79275691-79275710 None:intergenic 25.0%
! ATAAATGGTATGATCATGAA+TGG - chr5.1:79274695-79274714 None:intergenic 25.0%
! ATAATTGAAATGAATCCATC+TGG + chr5.1:79271850-79271869 MS.gene38120:intron 25.0%
! ATTTGAGTATATTGTGTATG+TGG + chr5.1:79276003-79276022 MS.gene38120:intron 25.0%
! ATTTGGTATTAAGTTTCTTG+TGG - chr5.1:79271418-79271437 None:intergenic 25.0%
! CAAAAAATATATACGCTTCT+TGG - chr5.1:79274981-79275000 None:intergenic 25.0%
! CAAATTACAAAGAATTGATC+AGG - chr5.1:79274132-79274151 None:intergenic 25.0%
! CCAAAAACATATATTGCTTA+TGG + chr5.1:79273668-79273687 MS.gene38120:CDS 25.0%
! CTGATCAATTCTTTGTAATT+TGG + chr5.1:79274130-79274149 MS.gene38120:intron 25.0%
! GACTATCAAGTAAACAAATT+GGG - chr5.1:79273253-79273272 None:intergenic 25.0%
! GCAAATTTGGATAAATAATC+AGG - chr5.1:79273283-79273302 None:intergenic 25.0%
! GTAATAAAATGTCAACAGAT+TGG - chr5.1:79274825-79274844 None:intergenic 25.0%
! TAAATGGTATGATCATGAAT+GGG - chr5.1:79274694-79274713 None:intergenic 25.0%
! TAATACCAAATTAAGTTCAG+AGG + chr5.1:79271427-79271446 MS.gene38120:CDS 25.0%
! TAGAATAGACTATCAAGTAA+AGG - chr5.1:79273358-79273377 None:intergenic 25.0%
! TATTGCAAAGATTACATGTT+TGG + chr5.1:79271618-79271637 MS.gene38120:intron 25.0%
! TCAATGTAAAAGAAGTGATA+CGG + chr5.1:79271466-79271485 MS.gene38120:CDS 25.0%
! TGACTATCAAGTAAACAAAT+TGG - chr5.1:79273254-79273273 None:intergenic 25.0%
! TGTATATTCTTTATAAGGCA+AGG - chr5.1:79273579-79273598 None:intergenic 25.0%
! TTCAAATATACATGCAACAA+AGG + chr5.1:79274577-79274596 MS.gene38120:intron 25.0%
! TTCAAGGCTAAATTTGAATT+TGG + chr5.1:79275139-79275158 MS.gene38120:intron 25.0%
! TTCTTTGTAATTTGGCTATA+AGG + chr5.1:79274138-79274157 MS.gene38120:intron 25.0%
! TTTAACTCAACAAACAACAA+AGG - chr5.1:79274780-79274799 None:intergenic 25.0%
! TTTCATATATTCTCACATAC+CGG + chr5.1:79275634-79275653 MS.gene38120:intron 25.0%
!! AAAAATGATTGCTGACTATA+AGG - chr5.1:79272030-79272049 None:intergenic 25.0%
!! AACTTCATCGTATTTAGAAT+TGG - chr5.1:79272868-79272887 None:intergenic 25.0%
!! ATGTGTCAAGAATTTCTTTT+TGG + chr5.1:79275755-79275774 MS.gene38120:intron 25.0%
!! CCATAAGCAATATATGTTTT+TGG - chr5.1:79273671-79273690 None:intergenic 25.0%
!! GAATATACAAATCCTTTTAG+CGG + chr5.1:79273590-79273609 MS.gene38120:CDS 25.0%
!! GCACCATTTAAAACAAAATA+TGG - chr5.1:79276179-79276198 None:intergenic 25.0%
!! TATCACTTCTTTTACATTGA+TGG - chr5.1:79271466-79271485 None:intergenic 25.0%
!! TCTTTTAAACTCATCAATGT+CGG + chr5.1:79271780-79271799 MS.gene38120:intron 25.0%
!! TGTGTCAAGAATTTCTTTTT+GGG + chr5.1:79275756-79275775 MS.gene38120:intron 25.0%
!! TGTGTTATTGTGTATAACAT+CGG - chr5.1:79272646-79272665 None:intergenic 25.0%
!! TTACTTGATAGTCTATTCTA+TGG + chr5.1:79273358-79273377 MS.gene38120:intron 25.0%
!! TTCTAAATACGATGAAGTTT+TGG + chr5.1:79272869-79272888 MS.gene38120:CDS 25.0%
!!! AATCTAAATTTTAAGAACGC+TGG - chr5.1:79273021-79273040 None:intergenic 25.0%
!!! ATATATTTTTTGTTGGAGCA+AGG + chr5.1:79274989-79275008 MS.gene38120:intron 25.0%
!!! ATTTTATTACATTGACTTGC+AGG + chr5.1:79274835-79274854 MS.gene38120:intron 25.0%
!!! GAAGCGTATATATTTTTTGT+TGG + chr5.1:79274982-79275001 MS.gene38120:intron 25.0%
!!! GAGATTTAAGACATTTTCAA+TGG + chr5.1:79272739-79272758 MS.gene38120:CDS 25.0%
!!! TAACTTGTTTCATATTGTGT+CGG + chr5.1:79271588-79271607 MS.gene38120:intron 25.0%
!!! TAATTTGATTTGTGGTGTTT+TGG + chr5.1:79274018-79274037 MS.gene38120:intron 25.0%
AAAAGTGAGTTTGTGATGTA+TGG - chr5.1:79275226-79275245 None:intergenic 30.0%
AAAGCTAAAAATAAAACCGG+TGG + chr5.1:79272114-79272133 MS.gene38120:CDS 30.0%
AAATGGTATGATCATGAATG+GGG - chr5.1:79274693-79274712 None:intergenic 30.0%
AAGAAATTCTTGACACATGA+TGG - chr5.1:79275753-79275772 None:intergenic 30.0%
AAGATTACATGTTTGGATCT+TGG + chr5.1:79271625-79271644 MS.gene38120:intron 30.0%
AATAAAGGAAGAAAGAGACT+TGG + chr5.1:79271295-79271314 MS.gene38120:CDS 30.0%
AATGTACTTGAATGTACATC+TGG + chr5.1:79272795-79272814 MS.gene38120:CDS 30.0%
AATTAAGCTTCAAGATGTAG+AGG + chr5.1:79272575-79272594 MS.gene38120:CDS 30.0%
ACATCACTCTCATTCAATTT+AGG - chr5.1:79271705-79271724 None:intergenic 30.0%
ACCATGATGACATTCATTAT+CGG - chr5.1:79272478-79272497 None:intergenic 30.0%
ACTATAGGAAATGAAGCATA+AGG + chr5.1:79271876-79271895 MS.gene38120:intron 30.0%
AGGCTGTTAATTACATAGAT+TGG + chr5.1:79272898-79272917 MS.gene38120:CDS 30.0%
ATAATTAAGAGGTTCATGAC+AGG - chr5.1:79273783-79273802 None:intergenic 30.0%
ATATACATGCAACAAAGGAA+TGG + chr5.1:79274582-79274601 MS.gene38120:intron 30.0%
ATGATTAGATTTGGCAATCT+TGG + chr5.1:79276121-79276140 MS.gene38120:intron 30.0%
ATTTCCTATAGTAAACCAGA+TGG - chr5.1:79271868-79271887 None:intergenic 30.0%
CAAATTTGCCTAACATTCTT+GGG + chr5.1:79273294-79273313 MS.gene38120:intron 30.0%
CAATGTAAAAGAAGTGATAC+GGG + chr5.1:79271467-79271486 MS.gene38120:CDS 30.0%
CGCAAAGCTAAAAATAAAAC+CGG + chr5.1:79272111-79272130 MS.gene38120:CDS 30.0%
CTTTACAACAAAACAGATCA+AGG + chr5.1:79276151-79276170 MS.gene38120:intron 30.0%
GAAAAACAAGCTATGAATCT+TGG + chr5.1:79271116-79271135 MS.gene38120:CDS 30.0%
GAAAATGTCTTAAATCTCCA+TGG - chr5.1:79272737-79272756 None:intergenic 30.0%
GATACATACTCGATCTTAAT+TGG - chr5.1:79272369-79272388 None:intergenic 30.0%
GTTGAATAACGGTGAAAATT+CGG + chr5.1:79271040-79271059 MS.gene38120:CDS 30.0%
GTTTGCTTTACATACTAACT+CGG - chr5.1:79272541-79272560 None:intergenic 30.0%
TAATTACATAGATTGGTGTG+AGG + chr5.1:79272905-79272924 MS.gene38120:CDS 30.0%
TATACACAATAACACAACGA+AGG + chr5.1:79272650-79272669 MS.gene38120:CDS 30.0%
TCAATAACCTACATTACCAA+AGG - chr5.1:79274670-79274689 None:intergenic 30.0%
TCATACCATTTATCTGACTA+TGG + chr5.1:79274702-79274721 MS.gene38120:CDS 30.0%
TGAAGAACAAATGATTGAGA+AGG + chr5.1:79271978-79271997 MS.gene38120:CDS 30.0%
TGAATCCACATGATTAGATT+TGG + chr5.1:79276112-79276131 MS.gene38120:intron 30.0%
TGATTAGATTTGGCAATCTT+GGG + chr5.1:79276122-79276141 MS.gene38120:intron 30.0%
TTAATGACAGTAATTTCCTC+AGG - chr5.1:79274202-79274221 None:intergenic 30.0%
TTAGTGTAATTGGCATATGT+TGG + chr5.1:79273093-79273112 MS.gene38120:intron 30.0%
TTCTCTAAGTATATGCTGAA+AGG + chr5.1:79271928-79271947 MS.gene38120:CDS 30.0%
TTCTTGAATGAGATATCCTT+TGG + chr5.1:79274651-79274670 MS.gene38120:intron 30.0%
TTTATGTCACTAGTCAGAAA+AGG - chr5.1:79274068-79274087 None:intergenic 30.0%
TTTGTCTCTCCTGAAAATAT+TGG + chr5.1:79275348-79275367 MS.gene38120:CDS 30.0%
! ATATGACAATTTTCTTCACC+TGG - chr5.1:79275822-79275841 None:intergenic 30.0%
! TATTGTTTAAAGCCTGACAT+GGG + chr5.1:79273644-79273663 MS.gene38120:CDS 30.0%
! TTATTGTTTAAAGCCTGACA+TGG + chr5.1:79273643-79273662 MS.gene38120:CDS 30.0%
!! AGGTGTTGAAATTGAAAGAT+TGG + chr5.1:79273495-79273514 MS.gene38120:CDS 30.0%
!! CACTAAAAAAAATTGGCTTG+AGG - chr5.1:79273079-79273098 None:intergenic 30.0%
!! TCAGGCTTTAAACAATAATC+CGG - chr5.1:79273641-79273660 None:intergenic 30.0%
!! TGCACTTTTTAATACGATAC+TGG - chr5.1:79273862-79273881 None:intergenic 30.0%
!! TTAAATGGTGCATTTTGATG+AGG + chr5.1:79276188-79276207 MS.gene38120:intron 30.0%
!!! TATGAACTGTTTTTTCCTGA+TGG + chr5.1:79275783-79275802 MS.gene38120:intron 30.0%
!!! TTTTTGGTTGTGTCTTGTTA+AGG + chr5.1:79271676-79271695 MS.gene38120:intron 30.0%
AATATCCACCAATTCTTCAC+TGG + chr5.1:79273434-79273453 MS.gene38120:CDS 35.0%
ACAGATTTCTATACTGTCCT+AGG + chr5.1:79272697-79272716 MS.gene38120:CDS 35.0%
AGAAATTCAGAAGAGGAAGA+TGG + chr5.1:79271247-79271266 MS.gene38120:CDS 35.0%
AGAGGATGTAACCAAATTGA+AGG + chr5.1:79274378-79274397 MS.gene38120:CDS 35.0%
AGCTTCTGAATAAAAGTCCA+AGG - chr5.1:79274868-79274887 None:intergenic 35.0%
AGTACATTGCTGACAATTAC+AGG - chr5.1:79272783-79272802 None:intergenic 35.0%
ATAAGGAATACCTTGTCTCT+TGG - chr5.1:79272013-79272032 None:intergenic 35.0%
ATATATTCTCACATACCGGA+GGG + chr5.1:79275638-79275657 MS.gene38120:intron 35.0%
ATGAAACTTAAGGAGGAGTA+TGG + chr5.1:79274733-79274752 MS.gene38120:CDS 35.0%
ATGCTCCATAGTCAGATAAA+TGG - chr5.1:79274710-79274729 None:intergenic 35.0%
ATGGTTTCCTTGAAATGAGA+AGG + chr5.1:79272493-79272512 MS.gene38120:CDS 35.0%
ATTGAATAACGGTGAAGGTT+CGG + chr5.1:79270923-79270942 MS.gene38120:CDS 35.0%
CAGATTTCTATACTGTCCTA+GGG + chr5.1:79272698-79272717 MS.gene38120:CDS 35.0%
CAGCATCAAACACATTACAA+TGG - chr5.1:79273736-79273755 None:intergenic 35.0%
CCAAATTTGCCTAACATTCT+TGG + chr5.1:79273293-79273312 MS.gene38120:intron 35.0%
CCAAGAATGTTAGGCAAATT+TGG - chr5.1:79273296-79273315 None:intergenic 35.0%
CCTGTTTGAACAAATGGTAA+GGG + chr5.1:79271537-79271556 MS.gene38120:intron 35.0%
CCTTACCATTTGTTCAAACA+GGG - chr5.1:79271539-79271558 None:intergenic 35.0%
CCTTCGACATAAAATCGAAA+AGG - chr5.1:79275950-79275969 None:intergenic 35.0%
CGAGAAAAACAAGCTATGAA+TGG + chr5.1:79270996-79271015 MS.gene38120:CDS 35.0%
CGTTCCTGAAATAAATCAGA+AGG - chr5.1:79273524-79273543 None:intergenic 35.0%
CTGTTTGAACAAATGGTAAG+GGG + chr5.1:79271538-79271557 MS.gene38120:intron 35.0%
GAAAAACAAGCTATGAATGG+TGG + chr5.1:79270999-79271018 MS.gene38120:CDS 35.0%
GACTTCTTCCACATTTAAGA+CGG + chr5.1:79271950-79271969 MS.gene38120:CDS 35.0%
GATATTCGGATGTGAATTAC+AGG + chr5.1:79272079-79272098 MS.gene38120:intron 35.0%
GATTGCCAAATCTAATCATG+TGG - chr5.1:79276120-79276139 None:intergenic 35.0%
GCATAAGATGAAACTTAAGG+AGG + chr5.1:79274726-79274745 MS.gene38120:CDS 35.0%
GGAGCATAAGATGAAACTTA+AGG + chr5.1:79274723-79274742 MS.gene38120:CDS 35.0%
GGATTCCTCTGAACTTAATT+TGG - chr5.1:79271435-79271454 None:intergenic 35.0%
GGTCTAAATTTCTTGATGTC+TGG + chr5.1:79273224-79273243 MS.gene38120:intron 35.0%
GTTGTTAGTGAGCAGAATAA+AGG + chr5.1:79271280-79271299 MS.gene38120:CDS 35.0%
TAGAGGAGACTTGTGATAAT+AGG + chr5.1:79272592-79272611 MS.gene38120:CDS 35.0%
TCCTGAAATAAATCAGAAGG+AGG - chr5.1:79273521-79273540 None:intergenic 35.0%
TCTTAACTCGGAAGAAAGTA+TGG - chr5.1:79274557-79274576 None:intergenic 35.0%
TCTTTCAATTTCAACACCTC+AGG - chr5.1:79273494-79273513 None:intergenic 35.0%
TGGCTATAAGGTAAATGTGT+TGG + chr5.1:79274150-79274169 MS.gene38120:intron 35.0%
TTAAGTTTCTTGTGGACTTG+TGG - chr5.1:79271410-79271429 None:intergenic 35.0%
TTACCTTCAGATTTCTGACT+TGG - chr5.1:79274927-79274946 None:intergenic 35.0%
TTCATGACAGGAAAGAGAAA+AGG - chr5.1:79273771-79273790 None:intergenic 35.0%
TTGTGTAACCAGTGAAGAAT+TGG - chr5.1:79273445-79273464 None:intergenic 35.0%
TTTGTTGGAGCAAGGAAAAA+CGG + chr5.1:79274997-79275016 MS.gene38120:intron 35.0%
! AAGCACTCACCAATATTTTC+AGG - chr5.1:79275360-79275379 None:intergenic 35.0%
! AATGTACATCTGGTTTAAGC+TGG + chr5.1:79272805-79272824 MS.gene38120:CDS 35.0%
! AATTCTTCACTGGTTACACA+AGG + chr5.1:79273444-79273463 MS.gene38120:CDS 35.0%
! ATGTACATCTGGTTTAAGCT+GGG + chr5.1:79272806-79272825 MS.gene38120:CDS 35.0%
! ATTCTTCACTGGTTACACAA+GGG + chr5.1:79273445-79273464 MS.gene38120:CDS 35.0%
! ATTGTTTAAAGCCTGACATG+GGG + chr5.1:79273645-79273664 MS.gene38120:CDS 35.0%
! CCTTTTCGATTTTATGTCGA+AGG + chr5.1:79275947-79275966 MS.gene38120:intron 35.0%
! CTTAACTCGGAAGAAAGTAT+GGG - chr5.1:79274556-79274575 None:intergenic 35.0%
! GAAGTATCCTTCTCATTTCA+AGG - chr5.1:79272503-79272522 None:intergenic 35.0%
! GAATCCATCTGGTTTACTAT+AGG + chr5.1:79271861-79271880 MS.gene38120:intron 35.0%
! GTTTTGCAGAAATTCAGAAG+AGG + chr5.1:79271240-79271259 MS.gene38120:CDS 35.0%
! TAAGACATTTTCAATGGCAC+TGG + chr5.1:79272745-79272764 MS.gene38120:CDS 35.0%
! TATGGATTTGCTCATGATCT+TGG + chr5.1:79273686-79273705 MS.gene38120:CDS 35.0%
! TGACACTAATGATAGTGACT+TGG + chr5.1:79274306-79274325 MS.gene38120:CDS 35.0%
! TGCGTTTAAGTATCGTAACT+TGG + chr5.1:79276247-79276266 MS.gene38120:CDS 35.0%
! TGGACTTTTATTCAGAAGCT+TGG + chr5.1:79274868-79274887 MS.gene38120:CDS 35.0%
! TTGTTTCATATTGTGTCGGT+TGG + chr5.1:79271592-79271611 MS.gene38120:intron 35.0%
!! AAATTGCAGTCCTTTAAAGC+AGG + chr5.1:79274438-79274457 MS.gene38120:CDS 35.0%
!! GAGATATCCTTTGGTAATGT+AGG + chr5.1:79274660-79274679 MS.gene38120:intron 35.0%
!! GCTGATTTTACCTGCTTTAA+AGG - chr5.1:79274451-79274470 None:intergenic 35.0%
!! TATGAATCTTGGTGCCAATA+CGG + chr5.1:79271127-79271146 MS.gene38120:CDS 35.0%
!! TCATCTTTAGAATGATCCAC+CGG - chr5.1:79272133-79272152 None:intergenic 35.0%
!!! ATAGCTTGTTTTTCTCGATC+AGG - chr5.1:79270993-79271012 None:intergenic 35.0%
!!! TGACATTCATTATCGGCTTT+TGG - chr5.1:79272471-79272490 None:intergenic 35.0%
!!! TTTTTTGCAGTCATGCATCA+AGG + chr5.1:79275314-79275333 MS.gene38120:intron 35.0%
AAAAGGGAGCTAGTTGGTTA+TGG + chr5.1:79274253-79274272 MS.gene38120:CDS 40.0%
AAAGGGAGCTAGTTGGTTAT+GGG + chr5.1:79274254-79274273 MS.gene38120:CDS 40.0%
AACAGATTCTTCTGCTACTG+CGG - chr5.1:79271087-79271106 None:intergenic 40.0%
ACAAAGTGAAACAGCAGCTA+AGG - chr5.1:79271567-79271586 None:intergenic 40.0%
ACAATTCGCCCAAGAATGTT+AGG - chr5.1:79273305-79273324 None:intergenic 40.0%
ACACTCCCTACTTTGAATGT+TGG + chr5.1:79270882-79270901 MS.gene38120:CDS 40.0%
ACTAACTCGGAGATGCAATT+CGG - chr5.1:79272528-79272547 None:intergenic 40.0%
AGCACCTTGAGCAAGATAAA+AGG + chr5.1:79274236-79274255 MS.gene38120:CDS 40.0%
AGGCTCTTCATCATTTCAAC+CGG + chr5.1:79271325-79271344 MS.gene38120:CDS 40.0%
AGTGTTTCATCGTCAGGAAT+GGG - chr5.1:79270867-79270886 None:intergenic 40.0%
ATAACATCGGCGTTACTAAC+AGG - chr5.1:79272633-79272652 None:intergenic 40.0%
ATCTGTGATTTATCGGAAGC+CGG - chr5.1:79275404-79275423 None:intergenic 40.0%
ATGCGCGTAAATATACCAGA+GGG + chr5.1:79276075-79276094 MS.gene38120:intron 40.0%
ATTTGGTTACATCCTCTCTC+CGG - chr5.1:79274375-79274394 None:intergenic 40.0%
CAAAGTGAAACAGCAGCTAA+GGG - chr5.1:79271566-79271585 None:intergenic 40.0%
CAAGATAAAAGGGAGCTAGT+TGG + chr5.1:79274247-79274266 MS.gene38120:CDS 40.0%
CATATATTCTCACATACCGG+AGG + chr5.1:79275637-79275656 MS.gene38120:intron 40.0%
CCCTGTTTGAACAAATGGTA+AGG + chr5.1:79271536-79271555 MS.gene38120:intron 40.0%
CCCTTACCATTTGTTCAAAC+AGG - chr5.1:79271540-79271559 None:intergenic 40.0%
GAAACGGCGTCATTGAATAA+CGG + chr5.1:79270912-79270931 MS.gene38120:CDS 40.0%
GAAACTGCGTCGTTGAATAA+CGG + chr5.1:79271029-79271048 MS.gene38120:CDS 40.0%
GACACATGATGGCATAAAAC+AGG - chr5.1:79275742-79275761 None:intergenic 40.0%
GCACCTTGAGCAAGATAAAA+GGG + chr5.1:79274237-79274256 MS.gene38120:CDS 40.0%
GCATACCCTGTTTGAACAAA+TGG + chr5.1:79271531-79271550 MS.gene38120:CDS 40.0%
GCCGATAATGAATGTCATCA+TGG + chr5.1:79272474-79272493 MS.gene38120:CDS 40.0%
GCCTCCTTCTGATTTATTTC+AGG + chr5.1:79273517-79273536 MS.gene38120:CDS 40.0%
GCGATCACACGATACTAATT+AGG - chr5.1:79275171-79275190 None:intergenic 40.0%
GCTATGGAGATAATGAAACG+CGG + chr5.1:79271209-79271228 MS.gene38120:CDS 40.0%
GTATATTTACGCGCATACCT+TGG - chr5.1:79276071-79276090 None:intergenic 40.0%
TAAAAGAAGTGATACGGGCA+GGG + chr5.1:79271472-79271491 MS.gene38120:CDS 40.0%
TAAAGTGGAACTGAAACCTG+AGG + chr5.1:79274183-79274202 MS.gene38120:CDS 40.0%
TATGCGCGTAAATATACCAG+AGG + chr5.1:79276074-79276093 MS.gene38120:intron 40.0%
TCACCAAGTCAGAAATCTGA+AGG + chr5.1:79274921-79274940 MS.gene38120:CDS 40.0%
TCATCCAACCGTCTTAAATG+TGG - chr5.1:79271961-79271980 None:intergenic 40.0%
TGATCTGGTAAGGACTGATT+TGG + chr5.1:79272158-79272177 MS.gene38120:intron 40.0%
TGTAACCAGTGAAGAATTGG+TGG - chr5.1:79273442-79273461 None:intergenic 40.0%
TTACAGGTCTGAGAAAACCA+AGG + chr5.1:79276051-79276070 MS.gene38120:intron 40.0%
TTCCTCAGTTAAAGCTGCTA+TGG + chr5.1:79271193-79271212 MS.gene38120:CDS 40.0%
TTGAAATGATGAAGAGCCTC+CGG - chr5.1:79271324-79271343 None:intergenic 40.0%
TTGCAATTATCACAGCACAC+AGG - chr5.1:79271741-79271760 None:intergenic 40.0%
! CACTAATGATAGTGACTTGG+TGG + chr5.1:79274309-79274328 MS.gene38120:CDS 40.0%
! GACTTGTGGAACCTCATTTT+GGG - chr5.1:79271396-79271415 None:intergenic 40.0%
! TCTTCCACATTTAAGACGGT+TGG + chr5.1:79271954-79271973 MS.gene38120:CDS 40.0%
! TTCTTCACTGGTTACACAAG+GGG + chr5.1:79273446-79273465 MS.gene38120:CDS 40.0%
! TTGGCGGATCTGTGATTTAT+CGG - chr5.1:79275411-79275430 None:intergenic 40.0%
! TTTACATTGATGGCACGCTA+AGG - chr5.1:79271456-79271475 None:intergenic 40.0%
!! AAATTGGCTTGAGGTTCACA+CGG - chr5.1:79273070-79273089 None:intergenic 40.0%
!! AATGATAGTGACTTGGTGGT+TGG + chr5.1:79274313-79274332 MS.gene38120:CDS 40.0%
!! CGGTTTTGTAGAGTTCAGTT+AGG - chr5.1:79273047-79273066 None:intergenic 40.0%
!! GTGCTATCTGGGATATTTTC+CGG + chr5.1:79274353-79274372 MS.gene38120:CDS 40.0%
!! TCGTAACTTGGAAGTACCTA+TGG + chr5.1:79276259-79276278 MS.gene38120:CDS 40.0%
!! TTCAGATTTCTGACTTGGTG+AGG - chr5.1:79274922-79274941 None:intergenic 40.0%
!!! CGATGAAGTTTTGGATGTGA+AGG + chr5.1:79272878-79272897 MS.gene38120:CDS 40.0%
!!! TCATTATCGGCTTTTGGACA+GGG - chr5.1:79272465-79272484 None:intergenic 40.0%
!!! TTCATTATCGGCTTTTGGAC+AGG - chr5.1:79272466-79272485 None:intergenic 40.0%
!!! TTTTTAGCTTTGCGAGTGAG+AGG - chr5.1:79272105-79272124 None:intergenic 40.0%
AACCCTCCAAAAGGTCATGA+GGG - chr5.1:79274509-79274528 None:intergenic 45.0%
AAGGGAGCTAGTTGGTTATG+GGG + chr5.1:79274255-79274274 MS.gene38120:CDS 45.0%
ACAGACCTCAAACTTGTCCT+TGG - chr5.1:79275430-79275449 None:intergenic 45.0%
AGAGGAGACAAAGGTCAAAG+TGG - chr5.1:79272302-79272321 None:intergenic 45.0%
AGGTTGAGAGAACCGCTAAA+AGG - chr5.1:79273605-79273624 None:intergenic 45.0%
ATCCCAGATAGCACCTTCTA+AGG - chr5.1:79274347-79274366 None:intergenic 45.0%
ATGCAACAAAGGAATGGCGA+AGG + chr5.1:79274588-79274607 MS.gene38120:intron 45.0%
ATTCAATGACGCCGTTTCAG+CGG - chr5.1:79270910-79270929 None:intergenic 45.0%
CGAGTATGTATCACAGACTG+AGG + chr5.1:79272377-79272396 MS.gene38120:CDS 45.0%
CTAAAGATGAGCGTGTGATC+TGG + chr5.1:79272143-79272162 MS.gene38120:CDS 45.0%
CTCGACTTCCTCATCATTGT+TGG - chr5.1:79271908-79271927 None:intergenic 45.0%
GAAAGAGAAGCCAAGAGACA+AGG + chr5.1:79272000-79272019 MS.gene38120:CDS 45.0%
GAAGGAATCCACCCAAAATG+AGG + chr5.1:79271382-79271401 MS.gene38120:CDS 45.0%
GACTTGCAGGAATTGAACCT+TGG + chr5.1:79274848-79274867 MS.gene38120:intron 45.0%
GAGAAAGAGAAAAGCGGAGA+AGG + chr5.1:79271364-79271383 MS.gene38120:CDS 45.0%
GAGTGTTTCATCGTCAGGAA+TGG - chr5.1:79270868-79270887 None:intergenic 45.0%
GATAAATCACAGATCCGCCA+AGG + chr5.1:79275410-79275429 MS.gene38120:CDS 45.0%
GCGTCATTGAATAACGGTGA+AGG + chr5.1:79270918-79270937 MS.gene38120:CDS 45.0%
GGTCGAAACCAACAATGATG+AGG + chr5.1:79271897-79271916 MS.gene38120:CDS 45.0%
GGTGAAAATTCGGTTGAAGC+TGG + chr5.1:79271050-79271069 MS.gene38120:CDS 45.0%
GTAAAAGAAGTGATACGGGC+AGG + chr5.1:79271471-79271490 MS.gene38120:CDS 45.0%
TCCCAGATAGCACCTTCTAA+GGG - chr5.1:79274346-79274365 None:intergenic 45.0%
TTGCTCATGATCTTGGACGT+GGG + chr5.1:79273693-79273712 MS.gene38120:CDS 45.0%
TTTGCTCATGATCTTGGACG+TGG + chr5.1:79273692-79273711 MS.gene38120:CDS 45.0%
! AATGCACGCCACATGACTTT+TGG - chr5.1:79272834-79272853 None:intergenic 45.0%
! ATGAAGTCAGCATGATGACG+AGG - chr5.1:79273551-79273570 None:intergenic 45.0%
! CTCCATAGCAGCTTTAACTG+AGG - chr5.1:79271198-79271217 None:intergenic 45.0%
! GAAGAAAGAGACTTGGTAGC+CGG + chr5.1:79271302-79271321 MS.gene38120:CDS 45.0%
! GCTCCCTTTTATCTTGCTCA+AGG - chr5.1:79274243-79274262 None:intergenic 45.0%
! GGACTTGTGGAACCTCATTT+TGG - chr5.1:79271397-79271416 None:intergenic 45.0%
! GGCATTTTGTACAGCTTCTG+TGG - chr5.1:79272281-79272300 None:intergenic 45.0%
! TTCAATGGCACTGGAGCAAA+GGG + chr5.1:79272754-79272773 MS.gene38120:CDS 45.0%
! TTGTGGAACCTCATTTTGGG+TGG - chr5.1:79271393-79271412 None:intergenic 45.0%
! TTTCAATGGCACTGGAGCAA+AGG + chr5.1:79272753-79272772 MS.gene38120:CDS 45.0%
! TTTTCCTGATGGCTGCTTCT+TGG + chr5.1:79275794-79275813 MS.gene38120:intron 45.0%
!! ATAGTGACTTGGTGGTTGGA+GGG + chr5.1:79274317-79274336 MS.gene38120:CDS 45.0%
!!! TATGTTTTTGGCCCCATGTC+AGG - chr5.1:79273659-79273678 None:intergenic 45.0%
AACCGGAGAGAAAGAAACGC+GGG + chr5.1:79271342-79271361 MS.gene38120:CDS 50.0%
AACTCGGAGATGCAATTCGG+AGG - chr5.1:79272525-79272544 None:intergenic 50.0%
AATCCGGCAACTTCACAGCA+AGG - chr5.1:79273625-79273644 None:intergenic 50.0%
AATCTCTCTCTCTCTCCCTC+TGG - chr5.1:79276093-79276112 None:intergenic 50.0%
ACAGCACACAGGACATGCTT+CGG - chr5.1:79271730-79271749 None:intergenic 50.0%
ACCCTCCAAAAGGTCATGAG+GGG - chr5.1:79274508-79274527 None:intergenic 50.0%
ACGCGGGAGAAAGAGAAAAG+CGG + chr5.1:79271358-79271377 MS.gene38120:CDS 50.0%
ACTCGTGAGTGGTCAAGATC+TGG + chr5.1:79272411-79272430 MS.gene38120:CDS 50.0%
AGATCTGGGTGGCATGCAAA+TGG + chr5.1:79272426-79272445 MS.gene38120:CDS 50.0%
AGCAGACTCTTCTGTTGCTG+CGG - chr5.1:79270970-79270989 None:intergenic 50.0%
AGGGCTGTAGATCTACACCA+TGG + chr5.1:79272717-79272736 MS.gene38120:CDS 50.0%
ATCCGCCAAGGACAAGTTTG+AGG + chr5.1:79275422-79275441 MS.gene38120:CDS 50.0%
CAACCCTCCAAAAGGTCATG+AGG - chr5.1:79274510-79274529 None:intergenic 50.0%
CAACCGGAGAGAAAGAAACG+CGG + chr5.1:79271341-79271360 MS.gene38120:CDS 50.0%
CCCAGATAGCACCTTCTAAG+GGG - chr5.1:79274345-79274364 None:intergenic 50.0%
CGCAACAACAGAGGAGACAA+AGG - chr5.1:79272311-79272330 None:intergenic 50.0%
CGGCGCCAACATTCAAAGTA+GGG - chr5.1:79270890-79270909 None:intergenic 50.0%
CTCGTGAGTGGTCAAGATCT+GGG + chr5.1:79272412-79272431 MS.gene38120:CDS 50.0%
CTGCTGGTAGTTAGCACCAT+AGG - chr5.1:79276278-79276297 None:intergenic 50.0%
GACCTCAAACTTGTCCTTGG+CGG - chr5.1:79275427-79275446 None:intergenic 50.0%
GATGAGCGTGTGATCTGGTA+AGG + chr5.1:79272148-79272167 MS.gene38120:intron 50.0%
GCTGGGAACCAAAAGTCATG+TGG + chr5.1:79272823-79272842 MS.gene38120:CDS 50.0%
GGACGATGAAATGGCAGCTA+GGG + chr5.1:79271166-79271185 MS.gene38120:CDS 50.0%
GGAGGGCAAGTCTTGCATAA+CGG + chr5.1:79275655-79275674 MS.gene38120:intron 50.0%
GTTATGCAAGACTTGCCCTC+CGG - chr5.1:79275656-79275675 None:intergenic 50.0%
GTTGGCGCATATCGCTAAAG+TGG + chr5.1:79274168-79274187 MS.gene38120:CDS 50.0%
GTTTGACAGAGGAATTCCGC+CGG + chr5.1:79275382-79275401 MS.gene38120:CDS 50.0%
TCAACGACGCAGTTTCAGCA+GGG - chr5.1:79271025-79271044 None:intergenic 50.0%
TCCTAGTGCAACCCTCCAAA+AGG - chr5.1:79274518-79274537 None:intergenic 50.0%
TGAGTGCTTGCGTTTGACAG+AGG + chr5.1:79275371-79275390 MS.gene38120:CDS 50.0%
TGCTCATGATCTTGGACGTG+GGG + chr5.1:79273694-79273713 MS.gene38120:CDS 50.0%
TGGTGTAGATCTACAGCCCT+AGG - chr5.1:79272717-79272736 None:intergenic 50.0%
TGTGATTTATCGGAAGCCGG+CGG - chr5.1:79275401-79275420 None:intergenic 50.0%
TTCAACGACGCAGTTTCAGC+AGG - chr5.1:79271026-79271045 None:intergenic 50.0%
! CAACCTTGCTGTGAAGTTGC+CGG + chr5.1:79273619-79273638 MS.gene38120:CDS 50.0%
! CGTCAGGAATGGGTTCTTCT+GGG - chr5.1:79270857-79270876 None:intergenic 50.0%
! CTGGGATATTTTCCGGAGAG+AGG + chr5.1:79274360-79274379 MS.gene38120:CDS 50.0%
! GAATGGGTTCTTCTGGGTCT+GGG - chr5.1:79270851-79270870 None:intergenic 50.0%
! GCTGTTGACGGACGATGAAA+TGG + chr5.1:79271157-79271176 MS.gene38120:CDS 50.0%
! GGATTCCCCTCATGACCTTT+TGG + chr5.1:79274500-79274519 MS.gene38120:intron 50.0%
! TCAATGGCACTGGAGCAAAG+GGG + chr5.1:79272755-79272774 MS.gene38120:CDS 50.0%
! TCCCCTCATGACCTTTTGGA+GGG + chr5.1:79274504-79274523 MS.gene38120:intron 50.0%
! TCGTCAGGAATGGGTTCTTC+TGG - chr5.1:79270858-79270877 None:intergenic 50.0%
! TTCCCCTCATGACCTTTTGG+AGG + chr5.1:79274503-79274522 MS.gene38120:intron 50.0%
! TTCGGTTGAAGCTGGTGATG+TGG + chr5.1:79270941-79270960 MS.gene38120:CDS 50.0%
!! ACCCCTTAGAAGGTGCTATC+TGG + chr5.1:79274341-79274360 MS.gene38120:CDS 50.0%
!! ACCTTTTGGAGGGTTGCACT+AGG + chr5.1:79274514-79274533 MS.gene38120:intron 50.0%
!! CCCCTTAGAAGGTGCTATCT+GGG + chr5.1:79274342-79274361 MS.gene38120:CDS 50.0%
!! GAATCTTGGTGCCAATACGG+TGG + chr5.1:79271130-79271149 MS.gene38120:CDS 50.0%
!! GATAGTGACTTGGTGGTTGG+AGG + chr5.1:79274316-79274335 MS.gene38120:CDS 50.0%
!! GTAGGGAGTGTTTCATCGTC+AGG - chr5.1:79270873-79270892 None:intergenic 50.0%
!! TAGTGACTTGGTGGTTGGAG+GGG + chr5.1:79274318-79274337 MS.gene38120:CDS 50.0%
!!! GATGCTGTTTTCATTCCCGC+TGG + chr5.1:79274892-79274911 MS.gene38120:CDS 50.0%
ACACAAGGGGTCGCAAGGAT+TGG + chr5.1:79273459-79273478 MS.gene38120:CDS 55.0%
ACGAGTCTACGACTCGTGAG+TGG + chr5.1:79272400-79272419 MS.gene38120:CDS 55.0%
CAACAGCGACTCCACCGTAT+TGG - chr5.1:79271144-79271163 None:intergenic 55.0%
CACCTAGAAGCTTCCCACCA+CGG - chr5.1:79272338-79272357 None:intergenic 55.0%
CGGACGATGAAATGGCAGCT+AGG + chr5.1:79271165-79271184 MS.gene38120:CDS 55.0%
CTCCCGCGTTTCTTTCTCTC+CGG - chr5.1:79271347-79271366 None:intergenic 55.0%
GAATGTTGGCGCCGCTGAAA+CGG + chr5.1:79270896-79270915 MS.gene38120:CDS 55.0%
GATGGCTGCTTCTTGGTACC+AGG + chr5.1:79275801-79275820 MS.gene38120:intron 55.0%
GCGGCGCCAACATTCAAAGT+AGG - chr5.1:79270891-79270910 None:intergenic 55.0%
GCTAGTTGGTTATGGGGAGG+CGG + chr5.1:79274261-79274280 MS.gene38120:CDS 55.0%
GGAGCTAGTTGGTTATGGGG+AGG + chr5.1:79274258-79274277 MS.gene38120:CDS 55.0%
GGTACCAAGAAGCAGCCATC+AGG - chr5.1:79275801-79275820 None:intergenic 55.0%
GTGAGTGGTCAAGATCTGGG+TGG + chr5.1:79272415-79272434 MS.gene38120:CDS 55.0%
TACGGTGGAGTCGCTGTTGA+CGG + chr5.1:79271145-79271164 MS.gene38120:CDS 55.0%
TGGTTACACAAGGGGTCGCA+AGG + chr5.1:79273454-79273473 MS.gene38120:CDS 55.0%
! GAAAGAGACTTGGTAGCCGG+AGG + chr5.1:79271305-79271324 MS.gene38120:CDS 55.0%
! GGAATGGGTTCTTCTGGGTC+TGG - chr5.1:79270852-79270871 None:intergenic 55.0%
! GGTGAAGGTTCGGTTGAAGC+TGG + chr5.1:79270933-79270952 MS.gene38120:CDS 55.0%
! GGTTGAAGCTGGTGATGTGG+CGG + chr5.1:79270944-79270963 MS.gene38120:CDS 55.0%
! GTCGCAAGGATTGGCGCAAT+TGG + chr5.1:79273468-79273487 MS.gene38120:CDS 55.0%
! TTGGCTTGAGGTTCACACGG+CGG - chr5.1:79273067-79273086 None:intergenic 55.0%
CACGGAGCTCGCAACAACAG+AGG - chr5.1:79272320-79272339 None:intergenic 60.0%
CTCTGTTGTTGCGAGCTCCG+TGG + chr5.1:79272318-79272337 MS.gene38120:CDS 60.0%
GGGTGGCATGCAAATGGCGA+TGG + chr5.1:79272432-79272451 MS.gene38120:CDS 60.0%
GTTGGAGGGGACCCCTTAGA+AGG + chr5.1:79274331-79274350 MS.gene38120:CDS 60.0%
GTTGTTGCGAGCTCCGTGGT+GGG + chr5.1:79272322-79272341 MS.gene38120:CDS 60.0%
TGTTGTTGCGAGCTCCGTGG+TGG + chr5.1:79272321-79272340 MS.gene38120:CDS 60.0%
! ACTTGGTGAGGCAAGCCAGC+GGG - chr5.1:79274910-79274929 None:intergenic 60.0%
! CGTGGTGGGAAGCTTCTAGG+TGG + chr5.1:79272336-79272355 MS.gene38120:CDS 60.0%
! CTCCGTGGTGGGAAGCTTCT+AGG + chr5.1:79272333-79272352 MS.gene38120:CDS 60.0%
! GGATTGGCGCAATTGGCCTG+AGG + chr5.1:79273475-79273494 MS.gene38120:CDS 60.0%
!! GACTTGGTGAGGCAAGCCAG+CGG - chr5.1:79274911-79274930 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 79270783 79276304 79270783 ID=MS.gene38120
chr5.1 mRNA 79270783 79276304 79270783 ID=MS.gene38120.t1;Parent=MS.gene38120
chr5.1 exon 79270783 79271552 79270783 ID=MS.gene38120.t1.exon1;Parent=MS.gene38120.t1
chr5.1 CDS 79270783 79271552 79270783 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79271698 79271740 79271698 ID=MS.gene38120.t1.exon2;Parent=MS.gene38120.t1
chr5.1 CDS 79271698 79271740 79271698 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79271883 79272021 79271883 ID=MS.gene38120.t1.exon3;Parent=MS.gene38120.t1
chr5.1 CDS 79271883 79272021 79271883 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79272101 79272164 79272101 ID=MS.gene38120.t1.exon4;Parent=MS.gene38120.t1
chr5.1 CDS 79272101 79272164 79272101 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79272248 79272926 79272248 ID=MS.gene38120.t1.exon5;Parent=MS.gene38120.t1
chr5.1 CDS 79272248 79272926 79272248 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79273425 79273754 79273425 ID=MS.gene38120.t1.exon6;Parent=MS.gene38120.t1
chr5.1 CDS 79273425 79273754 79273425 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79274160 79274459 79274160 ID=MS.gene38120.t1.exon7;Parent=MS.gene38120.t1
chr5.1 CDS 79274160 79274459 79274160 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79274682 79274754 79274682 ID=MS.gene38120.t1.exon8;Parent=MS.gene38120.t1
chr5.1 CDS 79274682 79274754 79274682 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79274857 79274942 79274857 ID=MS.gene38120.t1.exon9;Parent=MS.gene38120.t1
chr5.1 CDS 79274857 79274942 79274857 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79275324 79275443 79275324 ID=MS.gene38120.t1.exon10;Parent=MS.gene38120.t1
chr5.1 CDS 79275324 79275443 79275324 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79275823 79275881 79275823 ID=MS.gene38120.t1.exon11;Parent=MS.gene38120.t1
chr5.1 CDS 79275823 79275881 79275823 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79276057 79276072 79276057 ID=MS.gene38120.t1.exon12;Parent=MS.gene38120.t1
chr5.1 CDS 79276057 79276072 79276057 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
chr5.1 exon 79276245 79276304 79276245 ID=MS.gene38120.t1.exon13;Parent=MS.gene38120.t1
chr5.1 CDS 79276245 79276304 79276245 ID=cds.MS.gene38120.t1;Parent=MS.gene38120.t1
Gene Sequence

>MS.gene38120

ATGGCAGAGGAAGAGAACAACGAAATTGTCACTTATAGAGTGAAAATCAAAGTCACACTCACTGTCCCAGACCCAGAAGAACCCATTCCTGACGATGAAACACTCCCTACTTTGAATGTTGGCGCCGCTGAAACGGCGTCATTGAATAACGGTGAAGGTTCGGTTGAAGCTGGTGATGTGGCAGCCGCAGCAACAGAAGAGTCTGCTCCTGATCGAGAAAAACAAGCTATGAATGGTGGCCCTGCTGAAACTGCGTCGTTGAATAACGGTGAAAATTCGGTTGAAGCTGGTGATGTGGCGGCCGCAGTAGCAGAAGAATCTGTTCCTGATCGAGAAAAACAAGCTATGAATCTTGGTGCCAATACGGTGGAGTCGCTGTTGACGGACGATGAAATGGCAGCTAGGGATTCTTCCTCAGTTAAAGCTGCTATGGAGATAATGAAACGCGGAAGAAAGAGTTTTGCAGAAATTCAGAAGAGGAAGATGGATGAAGAAGCGTTGTTAGTGAGCAGAATAAAGGAAGAAAGAGACTTGGTAGCCGGAGGCTCTTCATCATTTCAACCGGAGAGAAAGAAACGCGGGAGAAAGAGAAAAGCGGAGAAGGAATCCACCCAAAATGAGGTTCCACAAGTCCACAAGAAACTTAATACCAAATTAAGTTCAGAGGAATCCTTAGCGTGCCATCAATGTAAAAGAAGTGATACGGGCAGGGTTATAAGATGCACAAAATGCAAACGAAGAAGATATTGCATACCCTGTTTGAACAAATGGTAAGGGGAACCCTTAGCTGCTGTTTCACTTTGTTTAACTTGTTTCATATTGTGTCGGTTGGTTCTATTGCAAAGATTACATGTTTGGATCTTGGTTGATGAAATATTGATATTAACTATGTTTTTTTGGTTGTGTCTTGTTAAGGTATCCTAAATTGAATGAGAGTGATGTTGCCGAAGCATGTCCTGTGTGCTGTGATAATTGCAATTGTAAAGCATGCTTGCGATCTTTTAAACTCATCAATGTCGGTGATCGTCTCTTCTAGATTAACTATTTTTCTCTTTTTTCTGTATTGTATAATTGAAATGAATCCATCTGGTTTACTATAGGAAATGAAGCATAAGGTCGAAACCAACAATGATGAGGAAGTCGAGTTCTCTAAGTATATGCTGAAAGGACTTCTTCCACATTTAAGACGGTTGGATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAAGAGACAAGGTATTCCTTATAGTCAGCAATCATTTTTAGTTTCATATATTTTTCATTTTAAAATTTGATATTCGGATGTGAATTACAGGCCTCTCACTCGCAAAGCTAAAAATAAAACCGGTGGATCATTCTAAAGATGAGCGTGTGATCTGGTAAGGACTGATTTGGTATATTAATCAATGTTTTCTTTATTTAATCTAATGCATTATAGTTGCTGATTTCACACTTTTTGTAGTGACAACTGCAAAACATCAATATTTGACTACCACAGAAGCTGTACAAAATGCCACTTTGACCTTTGTCTCCTCTGTTGTTGCGAGCTCCGTGGTGGGAAGCTTCTAGGTGGCGCAGATCCAATTAAGATCGAGTATGTATCACAGACTGAGGACGAGTCTACGACTCGTGAGTGGTCAAGATCTGGGTGGCATGCAAATGGCGATGGTAGCATTCCCTGTCCAAAAGCCGATAATGAATGTCATCATGGTTTCCTTGAAATGAGAAGGATACTTCCTCCGAATTGCATCTCCGAGTTAGTATGTAAAGCAAACGAACTTGCAGAAACAATTAAGCTTCAAGATGTAGAGGAGACTTGTGATAATAGGTGTTCTTGCTTGAAACCTGTTAGTAACGCCGATGTTATACACAATAACACAACGAAGGCAGCTTTTCTTGAAAATTCAAGTGACAGATTTCTATACTGTCCTAGGGCTGTAGATCTACACCATGGAGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCAAAAGTCATGTGGCGTGCATTCCGTCAAAAAACCAATTCTAAATACGATGAAGTTTTGGATGTGAAGGCTGTTAATTACATAGATTGGTGTGAGGTTTGTTTGATTTCTAAATTTATGATGAAGGGGTTCTTAATTGAATTCTTGTTTATTATCTTTGTGTGAAACTTGTTTCTAATTTATTTAACCAGCGTTCTTAAAATTTAGATTGTACCTAACTGAACTCTACAAAACCGCCGTGTGAACCTCAAGCCAATTTTTTTTAGTGTAATTGGCATATGTTGGTCATAATATCGCAGTCGTTTGCGCTTGTCACATATTGTTTTTCAACATTTTCAACAAATGCTACTTCACACTTCTCATTCAATATCTTGTATTCTTATCTTTTAAATTGGTCTAAATTTCTTGATGTCTGGTGTCCCAATTTGTTTACTTGATAGTCATAATATCCTGATTATTTATCCAAATTTGCCTAACATTCTTGGGCGAATTGTAACTGATTTATGTTACTGAATTTTTTACTGCCTTTACTTGATAGTCTATTCTATGGCTAGTAATTTATTTATTTTAATTTTAGTTGTTCATTGAATGCAGAGAGATATTAATATCCACCAATTCTTCACTGGTTACACAAGGGGTCGCAAGGATTGGCGCAATTGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACGTTTACCTCGTCATCATGCTGACTTCATAACTTCCTTGCCTTATAAAGAATATACAAATCCTTTTAGCGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTTTAAAGCCTGACATGGGGCCAAAAACATATATTGCTTATGGATTTGCTCATGATCTTGGACGTGGGGATTCAGTGACTAAGCTCCATTGTAATGTGTTTGATGCTGTATGCTTCAAAACCTTTTCTCTTTCCTGTCATGAACCTCTTAATTATTTGAGTTTTTCTTCTTGTTCTTTTTCTTTCCAAAAGATTTTACTGTTATTATGATTCCAGTATCGTATTAAAAAGTGCATAATTTGTAGGACATGTGCATTTTTGTTTTCGAAACCAATGCATTTATCTGTTCATTTTCGTATGAGCTGATTGTTGTGTAGTTTCAAGTACATGTTATAATTGTTTTGTTCATTGCACTGTCATAGATAATTTCATAATTTGATTTGTGGTGTTTTGGTAATTAATGATTCGAAAAAGTATTCCTTTTCTGACTAGTGACATAAACTGCAAAGTATATTTAGGAATGAATAATGAATGATACATTTCCTGATCAATTCTTTGTAATTTGGCTATAAGGTAAATGTGTTGGCGCATATCGCTAAAGTGGAACTGAAACCTGAGGAAATTACTGTCATTAAGAAATTGAGACATAAGCACCTTGAGCAAGATAAAAGGGAGCTAGTTGGTTATGGGGAGGCGGTTGATATGTTTCATCAACAATCTGACACTAATGATAGTGACTTGGTGGTTGGAGGGGACCCCTTAGAAGGTGCTATCTGGGATATTTTCCGGAGAGAGGATGTAACCAAATTGAAGGAATATATAAAGAAGCATTTTAGAGAGTTCAGACATGTAAATTGCAGTCCTTTAAAGCAGGTAAAATCAGCTTAGACAATTTTCTATTATCTAGCTTTATGGATTCCCCTCATGACCTTTTGGAGGGTTGCACTAGGATGAATTTGATTCTATCCCATACTTTCTTCCGAGTTAAGATTCAAATATACATGCAACAAAGGAATGGCGAAGGATCCAGCTTGTAATGAATAATAGTTGCTTGTTGTTGTATTTTCTTGAATGAGATATCCTTTGGTAATGTAGGTTATTGACCCCATTCATGATCATACCATTTATCTGACTATGGAGCATAAGATGAAACTTAAGGAGGAGTATGGTTAGTAATATTTATAAATATTCCTTTGTTGTTTGTTGAGTTAAATGATTTGATCATTCAAATGGAACCAATCTGTTGACATTTTATTACATTGACTTGCAGGAATTGAACCTTGGACTTTTATTCAGAAGCTTGGAGATGCTGTTTTCATTCCCGCTGGCTTGCCTCACCAAGTCAGAAATCTGAAGGTAAAATTTACATACAGTTTACAAGTTTCTGTTTGCCAAGAAGCGTATATATTTTTTGTTGGAGCAAGGAAAAACGGCTTAAATTAATTTAAGATCTGAATTGAGATCTGATTTATTTTGTGTTTTATCTCTTATCCTTTGTACTTGTCTTCTCTAAATTTTAGTAGATTGTTTGGTACTTAATAATTTGCAACTTTTCAAGGCTAAATTTGAATTTGGATATTTCCTAATTAGTATCGTGTGATCGCTTCAACCTATGATTTCTTGCAAATTGTTGAAGCCATACATCACAAACTCACTTTTTATTTCATGATTGCTTTTATGTTGAAACGATGCTTGAAATATCTGTGTTTATGTAATATATGCATTATTTTTTTGCAGTCATGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATATTGGTGAGTGCTTGCGTTTGACAGAGGAATTCCGCCGGCTTCCGATAAATCACAGATCCGCCAAGGACAAGTTTGAGGTCTGTCATACTACTTTTATTGATTCGATTCTGCTTTTTCTATTTATTAGGATACATTGAATAGAAACTCAATTCATGAAAATAACTAAGTAATATGGAAAATAATCTCAATAGATAATCCAAATAAGAAACTAATCATATGAGATAAACTAAAATATTCTAACATAACATTAGAATATCATAAGATTCTTTTCATATATTCTCACATACCGGAGGGCAAGTCTTGCATAACGGCATTGCTCATCCTTGTTGAATGTATGAAATCTTGATCATAAATCTATTTCAGTTCTACGTTCCTGTTTTATGCCATCATGTGTCAAGAATTTCTTTTTGGGATTTTATGAACTGTTTTTTCCTGATGGCTGCTTCTTGGTACCAGGTGAAGAAAATTGTCATATATGCTATGCTTGATGTGATTGAAAAATTAGAGAAAGAAAGGTTAGTGTGATTGCAAACTTCAAGTCTTTTAGTTATGAAGTTGTATGCTTACATTTCTTTATTAACCTTTTCGATTTTATGTCGAAGGCATTTATAGATTATATCTTATGTACAATTTAAAATTTGAGTATATTGTGTATGTGGTGAAAATTGATGATTGTGATTAAATTTACAGGTCTGAGAAAACCAAGGTATGCGCGTAAATATACCAGAGGGAGAGAGAGAGAGATTGAATCCACATGATTAGATTTGGCAATCTTGGGTTCTTTCTTTACAACAAAACAGATCAAGGTTCCATATTTTGTTTTAAATGGTGCATTTTGATGAGGTACATTTGAAACATTGTATGCTGACTTGTATTAGTGTGCGTTTAAGTATCGTAACTTGGAAGTACCTATGGTGCTAACTACCAGCAGTTGCTAA
Protein sequence

>MS.gene38120.t1

MAEEENNEIVTYRVKIKVTLTVPDPEEPIPDDETLPTLNVGAAETASLNNGEGSVEAGDVAAAATEESAPDREKQAMNGGPAETASLNNGENSVEAGDVAAAVAEESVPDREKQAMNLGANTVESLLTDDEMAARDSSSVKAAMEIMKRGRKSFAEIQKRKMDEEALLVSRIKEERDLVAGGSSSFQPERKKRGRKRKAEKESTQNEVPQVHKKLNTKLSSEESLACHQCKRSDTGRVIRCTKCKRRRYCIPCLNKWYPKLNESDVAEACPEMKHKVETNNDEEVEFSKYMLKGLLPHLRRLDEEQMIEKEREAKRQGLSLAKLKIKPVDHSKDERVICDNCKTSIFDYHRSCTKCHFDLCLLCCCELRGGKLLGGADPIKIEYVSQTEDESTTREWSRSGWHANGDGSIPCPKADNECHHGFLEMRRILPPNCISELVCKANELAETIKLQDVEETCDNRCSCLKPVSNADVIHNNTTKAAFLENSSDRFLYCPRAVDLHHGDLRHFQWHWSKGEPVIVSNVLECTSGLSWEPKVMWRAFRQKTNSKYDEVLDVKAVNYIDWCERDINIHQFFTGYTRGRKDWRNWPEVLKLKDWPPSDLFQERLPRHHADFITSLPYKEYTNPFSGSLNLAVKLPDYCLKPDMGPKTYIAYGFAHDLGRGDSVTKLHCNVFDAVNVLAHIAKVELKPEEITVIKKLRHKHLEQDKRELVGYGEAVDMFHQQSDTNDSDLVVGGDPLEGAIWDIFRREDVTKLKEYIKKHFREFRHVNCSPLKQVIDPIHDHTIYLTMEHKMKLKEEYGIEPWTFIQKLGDAVFIPAGLPHQVRNLKSCIKVALDFVSPENIGECLRLTEEFRRLPINHRSAKDKFEVKKIVIYAMLDVIEKLEKERSEKTKCAFKYRNLEVPMVLTTSSC