AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38121

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38121.t1 MTR_1g114070 75.157 958 147 12 1 894 1 931 0.0 1348
MS.gene38121.t1 MTR_1g114150 66.410 780 207 8 164 894 284 1057 0.0 1040
MS.gene38121.t1 MTR_1g114130 54.986 1053 307 17 1 894 1 1045 0.0 1035
MS.gene38121.t1 MTR_1g069565 57.644 883 284 11 98 894 10 888 0.0 979
MS.gene38121.t1 MTR_1g069565 53.191 940 293 14 98 894 10 945 0.0 926
MS.gene38121.t1 MTR_5g065200 64.566 714 207 4 216 889 129 836 0.0 923
MS.gene38121.t1 MTR_1g114150 64.199 662 182 8 164 776 284 939 0.0 841
MS.gene38121.t1 MTR_5g047620 60.693 664 210 8 272 888 139 798 0.0 794
MS.gene38121.t1 MTR_0020s0100 56.329 632 222 10 272 870 81 691 0.0 697
MS.gene38121.t1 MTR_2g024270 43.338 713 328 12 214 885 140 817 0.0 545
MS.gene38121.t1 MTR_4g132540 42.391 736 308 16 227 885 168 864 2.55e-180 543
MS.gene38121.t1 MTR_2g024140 42.324 697 321 12 226 885 33 685 2.96e-172 516
MS.gene38121.t1 MTR_7g117445 41.885 573 272 11 197 711 102 671 3.07e-136 428
MS.gene38121.t1 MTR_7g117445 59.091 110 43 1 719 826 756 865 1.33e-32 136
MS.gene38121.t1 MTR_7g117445 41.885 573 272 11 197 711 102 671 3.34e-136 430
MS.gene38121.t1 MTR_7g117445 55.618 178 77 1 719 894 756 933 9.57e-55 205
MS.gene38121.t1 MTR_7g117445 41.885 573 272 11 197 711 102 671 3.49e-136 430
MS.gene38121.t1 MTR_7g117445 57.396 169 70 1 719 885 756 924 1.28e-54 205
MS.gene38121.t1 MTR_7g117445 41.885 573 272 11 197 711 102 671 1.45e-135 429
MS.gene38121.t1 MTR_7g117445 57.396 169 70 1 719 885 756 924 1.56e-54 205
MS.gene38121.t1 MTR_1g083120 34.110 730 398 15 217 886 186 892 9.00e-133 421
MS.gene38121.t1 MTR_1g083120 34.110 730 398 15 217 886 203 909 1.27e-132 421
MS.gene38121.t1 MTR_2g011630 31.740 753 413 12 227 884 207 953 1.87e-119 387
MS.gene38121.t1 MTR_1g008060 44.510 510 252 11 224 712 858 1357 3.57e-118 395
MS.gene38121.t1 MTR_1g008060 66.912 136 45 0 741 876 1542 1677 5.19e-52 199
MS.gene38121.t1 MTR_1g008060 44.510 510 252 11 224 712 867 1366 3.95e-118 395
MS.gene38121.t1 MTR_1g008060 66.912 136 45 0 741 876 1551 1686 4.94e-52 199
MS.gene38121.t1 MTR_1g083120 33.333 672 365 15 217 828 186 834 1.14e-114 371
MS.gene38121.t1 MTR_1g083120 33.089 683 373 16 217 838 186 845 1.21e-114 370
MS.gene38121.t1 MTR_2g011630 33.985 665 355 11 290 877 45 702 1.93e-114 367
MS.gene38121.t1 MTR_2g011630 33.985 665 355 11 290 877 77 734 3.82e-114 367
MS.gene38121.t1 MTR_4g091520 36.013 597 280 15 374 886 699 1277 4.62e-105 354
MS.gene38121.t1 MTR_4g091520 32.000 175 90 4 227 373 260 433 2.94e-20 97.4
MS.gene38121.t1 MTR_8g062940 48.588 354 136 4 227 553 33 367 4.87e-100 317
MS.gene38121.t1 MTR_2g024240 54.325 289 116 3 564 850 114 388 4.53e-97 310
MS.gene38121.t1 MTR_5g098590 86.093 151 21 0 60 210 1 151 5.21e-79 253
MS.gene38121.t1 MTR_4g091520 33.855 511 236 15 374 800 664 1156 2.32e-70 254
MS.gene38121.t1 MTR_4g091520 32.000 175 90 4 227 373 260 433 2.31e-20 97.8
MS.gene38121.t1 MTR_4g091520 33.855 511 236 15 374 800 699 1191 2.41e-70 254
MS.gene38121.t1 MTR_4g091520 32.000 175 90 4 227 373 260 433 2.32e-20 97.8
MS.gene38121.t1 MTR_4g091520 33.855 511 236 15 374 800 629 1121 2.50e-70 253
MS.gene38121.t1 MTR_4g091520 32.000 175 90 4 227 373 260 433 2.49e-20 97.4
MS.gene38121.t1 MTR_0295s0020 59.172 169 66 1 555 720 12 180 3.03e-58 197
MS.gene38121.t1 MTR_8g465700 50.000 178 85 1 499 676 4 177 1.57e-49 176
MS.gene38121.t1 MTR_8g465720 70.787 89 25 1 740 828 52 139 1.62e-35 132
MS.gene38121.t1 MTR_8g013920 57.724 123 33 4 589 711 40 143 1.14e-29 117
MS.gene38121.t1 MTR_6g051900 41.000 200 59 7 1 200 1 141 4.18e-20 87.8
MS.gene38121.t1 MTR_6g051930 82.759 29 5 0 339 367 45 73 1.00e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38121.t1 AT1G11950 45.468 695 324 11 227 885 193 868 0.0 588
MS.gene38121.t1 AT1G11950 45.468 695 324 11 227 885 193 868 0.0 588
MS.gene38121.t1 AT1G62310 45.852 687 321 10 227 874 209 883 0.0 582
MS.gene38121.t1 AT3G07610 53.644 494 212 4 400 889 415 895 3.35e-170 522
MS.gene38121.t1 AT3G07610 32.781 302 167 6 120 386 32 332 1.01e-38 156
MS.gene38121.t1 AT1G11950 43.631 628 299 11 227 818 193 801 1.20e-163 498
MS.gene38121.t1 AT3G07610 51.462 513 216 5 400 889 415 917 4.42e-162 501
MS.gene38121.t1 AT3G07610 32.781 302 167 6 120 386 32 332 8.14e-39 156
MS.gene38121.t1 AT4G00990 43.529 510 250 9 226 704 79 581 4.82e-124 394
MS.gene38121.t1 AT4G00990 66.667 87 29 0 740 826 684 770 2.79e-31 132
MS.gene38121.t1 AT4G00990 43.529 510 250 9 226 704 79 581 7.61e-124 393
MS.gene38121.t1 AT4G00990 62.105 95 36 0 740 834 684 778 1.77e-31 132
MS.gene38121.t1 AT4G00990 43.529 510 250 9 226 704 79 581 1.58e-123 394
MS.gene38121.t1 AT4G00990 60.959 146 57 0 740 885 684 829 1.22e-52 198
MS.gene38121.t1 AT1G09060 31.417 748 412 18 203 886 181 891 2.47e-109 358
MS.gene38121.t1 AT1G09060 31.417 748 412 18 203 886 181 891 2.47e-109 358
MS.gene38121.t1 AT1G09060 31.417 748 412 18 203 886 195 905 4.22e-109 358
MS.gene38121.t1 AT1G09060 31.417 748 412 18 203 886 195 905 4.22e-109 358
MS.gene38121.t1 AT4G21430 28.709 728 416 15 222 884 222 911 2.21e-89 304
MS.gene38121.t1 AT3G07610 54.064 283 123 2 400 682 415 690 1.48e-87 296
MS.gene38121.t1 AT3G07610 32.781 302 167 6 120 386 32 332 4.38e-39 156

Find 208 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTAGATATTCCTTCAATT+TGG 0.122471 5.1:-79253251 None:intergenic
TAAAGGAATACCTTGTATTT+TGG 0.153940 5.1:-79250876 None:intergenic
GGATTCCTCTGAACTTAATT+TGG 0.160479 5.1:-79250296 None:intergenic
GCCTCCTTCTGATTTATTTC+AGG 0.172247 5.1:+79252385 MS.gene38121:CDS
GTTGAATAACGGTGAAAATT+TGG 0.180921 5.1:+79249904 MS.gene38121:CDS
ACATCGCTCTCATTCAATTT+AGG 0.222022 5.1:-79250568 None:intergenic
CTTATGTCTCAATTTCTTAA+TGG 0.241484 5.1:-79253077 None:intergenic
TGACATTCATTATCGGCTTT+TGG 0.263135 5.1:-79251335 None:intergenic
ATCCCAAAGAGCACCTTCTA+AGG 0.269470 5.1:-79253206 None:intergenic
GGATTTGTATATTCTTTATA+AGG 0.271748 5.1:-79252449 None:intergenic
ATCCCTTAGAAGGTGCTCTT+TGG 0.273656 5.1:+79253203 MS.gene38121:CDS
CGTCAGGAATGGGTTCTTCT+TGG 0.274859 5.1:-79249718 None:intergenic
AGTACATTGCTGACAATTAC+AGG 0.278275 5.1:-79251647 None:intergenic
TTCTAAATACGATGAAGTTT+TGG 0.278404 5.1:+79251736 MS.gene38121:CDS
GGAATGGGTTCTTCTTGGTC+TGG 0.294202 5.1:-79249713 None:intergenic
CCCTTACCATTTGTTCAAAC+AGG 0.304071 5.1:-79250401 None:intergenic
TCAGACCATTTATTTGACTA+TGG 0.310342 5.1:+79253608 MS.gene38121:CDS
AATGCACGCCACATGACTTT+TGG 0.316385 5.1:-79251698 None:intergenic
TTTAGATATTCCTTCAATTT+GGG 0.317263 5.1:-79253250 None:intergenic
TATGGATTTGCTCAGGATCT+TGG 0.334162 5.1:+79252554 MS.gene38121:CDS
CTCCGTGATGGGAAGATTCT+AGG 0.337207 5.1:+79251200 MS.gene38121:CDS
CTCGACTTCCTCATCATTGT+TGG 0.339463 5.1:-79250771 None:intergenic
CAACCTTGCTGTGAAGTTGC+CGG 0.339593 5.1:+79252487 MS.gene38121:CDS
TCCCTTAGAAGGTGCTCTTT+GGG 0.346691 5.1:+79253204 MS.gene38121:CDS
AACTTCATCGTATTTAGAAT+TGG 0.357620 5.1:-79251732 None:intergenic
ATATCATCGGCGTTACTAAC+AGG 0.365196 5.1:-79251497 None:intergenic
GCATACCCTGTTTGAACAAA+TGG 0.372456 5.1:+79250395 MS.gene38121:CDS
AAGAGGGAGCTACATGGTTA+TGG 0.374355 5.1:+79253115 MS.gene38121:CDS
GTCGCAAGGATTGGCGCAAT+TGG 0.374765 5.1:+79252336 MS.gene38121:CDS
ACTCGTGAGTGGTCAAGATC+TGG 0.380477 5.1:+79251278 MS.gene38121:CDS
ATGCTCCATAGTCAAATAAA+TGG 0.380895 5.1:-79253613 None:intergenic
TAGAGGAGACTTGTGATAAT+AGG 0.385192 5.1:+79251459 MS.gene38121:CDS
TTGGCAGTTCTGTGATTTAT+CGG 0.388228 5.1:-79254294 None:intergenic
TTATTTGACTATGGAGCATA+AGG 0.388980 5.1:+79253617 MS.gene38121:CDS
CTCAAAGCTAAATATAAAAC+CGG 0.396606 5.1:+79250978 MS.gene38121:CDS
CTGCATCAAACACATTACTA+TGG 0.402452 5.1:-79252601 None:intergenic
GTGAAACTCAAGGAGGAGTA+TGG 0.411308 5.1:+79253639 MS.gene38121:CDS
TTCAATGGCACTGGAGCAAA+GGG 0.413215 5.1:+79251621 MS.gene38121:CDS
GATGGAGGGGATCCCTTAGA+AGG 0.417119 5.1:+79253193 MS.gene38121:CDS
GATACATACTCGAGCTCAAT+TGG 0.418161 5.1:-79251233 None:intergenic
ATTGAATAACGGTGAAGCTT+CGG 0.419516 5.1:+79249787 MS.gene38121:CDS
AATGTACTTGAATGTACATC+TGG 0.421952 5.1:+79251662 MS.gene38121:CDS
CACTAATGATAGTGAGCTGC+TGG 0.422956 5.1:+79253171 MS.gene38121:CDS
AGAGGGAGCTACATGGTTAT+GGG 0.424853 5.1:+79253116 MS.gene38121:CDS
CTCCCGCGTTTCTTTCTCTC+CGG 0.425830 5.1:-79250208 None:intergenic
GAATGGGTTCTTCTTGGTCT+GGG 0.425933 5.1:-79249712 None:intergenic
TTAATGGCAGTAATTTCCTT+AGG 0.427741 5.1:-79253061 None:intergenic
AGGTTGAGAGAACCACTAAA+AGG 0.429360 5.1:-79252470 None:intergenic
TCAATGTAAAAGAAGTGATA+AGG 0.432873 5.1:+79250330 MS.gene38121:CDS
GAATGTTGGCGCCGCTGAAA+CGG 0.433221 5.1:+79249760 MS.gene38121:CDS
TTTGTCTCTCCTGAACATAT+TGG 0.437752 5.1:+79254234 MS.gene38121:CDS
ACTATAGGAAATGAAGTATA+AGG 0.443430 5.1:+79250742 MS.gene38121:intron
ACCATGATGACATTCATTAT+CGG 0.447505 5.1:-79251342 None:intergenic
AATGTACATCTGGTTTAAGC+TGG 0.447849 5.1:+79251672 MS.gene38121:CDS
GTAGGAAGTGTTTCATCGTC+AGG 0.448296 5.1:-79249734 None:intergenic
TAAATGGTCTGATCATGAAT+GGG 0.451339 5.1:-79253597 None:intergenic
TTCAACGACGCAGTTTCAGC+AGG 0.452822 5.1:-79249887 None:intergenic
TCTTCCACATTTAAGACGGT+TGG 0.461419 5.1:+79250820 MS.gene38121:CDS
AGGCTCTTCATCAGTTCAAC+CGG 0.461837 5.1:+79250189 MS.gene38121:CDS
AATATCCACCAATTCTTCAC+TGG 0.461911 5.1:+79252302 MS.gene38121:CDS
GCTGTTGACGGACGATGAAA+TGG 0.463517 5.1:+79250021 MS.gene38121:CDS
GAAGTATCCTTCTCAGTTCA+AGG 0.464781 5.1:-79251367 None:intergenic
GTTGTTAGTGAGCAGAATAA+AGG 0.465943 5.1:+79250144 MS.gene38121:CDS
TTACCTTCAGATTTCTGACT+TGG 0.467821 5.1:-79253816 None:intergenic
ATAAATGGTCTGATCATGAA+TGG 0.468212 5.1:-79253598 None:intergenic
AGTGTTTCATCGTCAGGAAT+GGG 0.468408 5.1:-79249728 None:intergenic
CTAAAGATGAGCGTGTGATC+TGG 0.471996 5.1:+79251010 MS.gene38121:CDS
ACACAAGGGGTCGCAAGGAT+TGG 0.472118 5.1:+79252327 MS.gene38121:CDS
TCTTTCAATTTCAACACCTC+AGG 0.472947 5.1:-79252359 None:intergenic
AGCACCTTGAGCAAGATAAG+AGG 0.480011 5.1:+79253098 MS.gene38121:CDS
TTAAGTTTCTTGTGGACTTG+TGG 0.481350 5.1:-79250271 None:intergenic
TATTGCTTATGGATTTGCTC+AGG 0.482748 5.1:+79252547 MS.gene38121:CDS
ATTTGGTATTAAGTTTCTTG+TGG 0.482774 5.1:-79250279 None:intergenic
CAACAGCGACTCCACCGTAT+TGG 0.485762 5.1:-79250005 None:intergenic
AAGTGTTTCATCGTCAGGAA+TGG 0.488943 5.1:-79249729 None:intergenic
TGTTGTTGCGAGCTCCGTGA+TGG 0.490189 5.1:+79251188 MS.gene38121:CDS
TTGTGTAACCAGTGAAGAAT+TGG 0.496636 5.1:-79252310 None:intergenic
TACGGTGGAGTCGCTGTTGA+CGG 0.498655 5.1:+79250009 MS.gene38121:CDS
AAATACCTCAAACTTGTCCT+TGG 0.499489 5.1:-79254313 None:intergenic
CGGACGATGAAATGGCAGCT+AGG 0.502074 5.1:+79250029 MS.gene38121:CDS
GTAAAAGAAGTGATAAGGGC+AGG 0.502632 5.1:+79250335 MS.gene38121:CDS
ACTAACTCGGAGATGCAATT+CGG 0.504538 5.1:-79251392 None:intergenic
CAATGTAAAAGAAGTGATAA+GGG 0.506714 5.1:+79250331 MS.gene38121:CDS
AGGTGTTGAAATTGAAAGAT+TGG 0.508050 5.1:+79252363 MS.gene38121:CDS
TCAGGCTTTAAACAATAATC+CGG 0.508635 5.1:-79252506 None:intergenic
TTCCTCGGTTAAAGCTGCTA+TGG 0.509230 5.1:+79250057 MS.gene38121:CDS
GGACGATGAAATGGCAGCTA+GGG 0.509416 5.1:+79250030 MS.gene38121:CDS
AGATCTGGGTGGCATGCAAA+TGG 0.510153 5.1:+79251293 MS.gene38121:CDS
AAGCACTCACCAATATGTTC+AGG 0.510499 5.1:-79254243 None:intergenic
GAGAAAGAGAAAAGCGGAGA+AGG 0.511730 5.1:+79250228 MS.gene38121:CDS
AGAAGATGTACCCAAATTGA+AGG 0.514954 5.1:+79253240 MS.gene38121:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 5.1:+79251620 MS.gene38121:CDS
AGGCTGTTAATTGCATAGAT+TGG 0.519223 5.1:+79251765 MS.gene38121:CDS
ACACTTCCTACTTTGAATGT+TGG 0.519974 5.1:+79249746 MS.gene38121:CDS
TGTATATTCTTTATAAGGCA+AGG 0.521531 5.1:-79252444 None:intergenic
TGTGTTATTGTGTATATCAT+CGG 0.523539 5.1:-79251510 None:intergenic
GACTTGTAGGAGTCGAACCT+TGG 0.524135 5.1:+79253740 MS.gene38121:intron
CTCGTGAGTGGTCAAGATCT+GGG 0.525734 5.1:+79251279 MS.gene38121:CDS
TATGAATCTTGGTGCCAATA+CGG 0.529389 5.1:+79249991 MS.gene38121:CDS
GGCAGCTAGGGATTCTTCCT+CGG 0.529744 5.1:+79250042 MS.gene38121:CDS
TGAAGAACAAATGATTGAGA+AGG 0.530667 5.1:+79250844 MS.gene38121:CDS
ATGGTTTCCTTGAACTGAGA+AGG 0.533086 5.1:+79251360 MS.gene38121:CDS
GTTGTTGCGAGCTCCGTGAT+GGG 0.536386 5.1:+79251189 MS.gene38121:CDS
ACAGCACACAGGACATGCTT+CGG 0.536929 5.1:-79250593 None:intergenic
GTTCTCTAAGTATATGCTGA+AGG 0.537340 5.1:+79250793 MS.gene38121:CDS
CCTTACCATTTGTTCAAACA+GGG 0.538038 5.1:-79250400 None:intergenic
GCCGATAATGAATGTCATCA+TGG 0.542022 5.1:+79251341 MS.gene38121:CDS
GGTGAAGCTTCGGTTGAAGC+TGG 0.543769 5.1:+79249797 MS.gene38121:CDS
GCTCCCTCTTATCTTGCTCA+AGG 0.544578 5.1:-79253102 None:intergenic
TAAGATGCACAAAATGCAAA+CGG 0.545481 5.1:+79250362 MS.gene38121:CDS
AACAGATTCTTCTGCTACTG+CGG 0.546201 5.1:-79249948 None:intergenic
TGGTGTAGATCTACTGCCCT+AGG 0.548506 5.1:-79251581 None:intergenic
GAAGAAAGAGACGTGGTAGC+CGG 0.548621 5.1:+79250166 MS.gene38121:CDS
GATGCTGTTGTCATTCCCGC+TGG 0.548983 5.1:+79253784 MS.gene38121:CDS
TATTTAGCTTTGAGAGTGAG+AGG 0.549143 5.1:-79250969 None:intergenic
TCATCCAACCGTCTTAAATG+TGG 0.550657 5.1:-79250824 None:intergenic
GCACCTTGAGCAAGATAAGA+GGG 0.553810 5.1:+79253099 MS.gene38121:CDS
AACTGCCAAGGACAAGTTTG+AGG 0.556463 5.1:+79254308 MS.gene38121:CDS
GAAGGAATCCACCGAAAATG+AGG 0.556975 5.1:+79250246 MS.gene38121:CDS
GAAAATGTCTTAAATCTCCA+TGG 0.559521 5.1:-79251601 None:intergenic
GAAACTGCGTCGTTGAATAA+CGG 0.560168 5.1:+79249893 MS.gene38121:CDS
GGTGAAAATTTGGTTGAAGC+TGG 0.563616 5.1:+79249914 MS.gene38121:CDS
GTATATTTACGCACGTACCT+TGG 0.563865 5.1:-79254984 None:intergenic
CAATCGCAGTCCTTTAAAGC+AGG 0.564157 5.1:+79253300 MS.gene38121:CDS
TTCAGATTTCTGACTTGGTG+AGG 0.565040 5.1:-79253811 None:intergenic
ATGTACATCTGGTTTAAGCT+GGG 0.567172 5.1:+79251673 MS.gene38121:CDS
GTTGACGCATATCGCTAAAG+TGG 0.567629 5.1:+79253030 MS.gene38121:CDS
TATTGTTTAAAGCCTGACAT+GGG 0.567740 5.1:+79252512 MS.gene38121:CDS
TTGAACTGATGAAGAGCCTC+CGG 0.568173 5.1:-79250185 None:intergenic
ACTTGGTGAGGCAAACCAGC+GGG 0.568266 5.1:-79253799 None:intergenic
TAAAGTGGAACTGAAACCTA+AGG 0.569692 5.1:+79253045 MS.gene38121:CDS
AACAGACTCTTCTGTTTCTG+CGG 0.571229 5.1:-79249831 None:intergenic
TTCTTCACTGGTTACACAAG+GGG 0.572201 5.1:+79252314 MS.gene38121:CDS
TTGCTCAGGATCTTGGACAC+GGG 0.573180 5.1:+79252561 MS.gene38121:CDS
AATGATAGTGAGCTGCTGGA+TGG 0.573935 5.1:+79253175 MS.gene38121:CDS
GACTTCTTCCACATTTAAGA+CGG 0.574626 5.1:+79250816 MS.gene38121:CDS
TTTACATTGATGGCACGCTA+AGG 0.575795 5.1:-79250317 None:intergenic
TTATTGTTTAAAGCCTGACA+TGG 0.576650 5.1:+79252511 MS.gene38121:CDS
TCCCAAAGAGCACCTTCTAA+GGG 0.579367 5.1:-79253205 None:intergenic
CAAGATAAGAGGGAGCTACA+TGG 0.579862 5.1:+79253109 MS.gene38121:CDS
CGTTCCTGAAATAAATCAGA+AGG 0.580684 5.1:-79252389 None:intergenic
TGTAACCAGTGAAGAATTGG+TGG 0.581894 5.1:-79252307 None:intergenic
TGGTTACACAAGGGGTCGCA+AGG 0.582867 5.1:+79252322 MS.gene38121:CDS
GTTTGCTTTAAATACTAACT+CGG 0.583154 5.1:-79251405 None:intergenic
ATAGTGAGCTGCTGGATGGA+GGG 0.586101 5.1:+79253179 MS.gene38121:CDS
AGAAATTCAGAAGAGGAAGA+TGG 0.587534 5.1:+79250111 MS.gene38121:CDS
CAACCACATTTCAATGGCGG+AGG 0.588641 5.1:+79249634 None:intergenic
GCGGCGCCAACATTCAAAGT+AGG 0.589375 5.1:-79249752 None:intergenic
CTCCATAGCAGCTTTAACCG+AGG 0.590989 5.1:-79250059 None:intergenic
GAAAGAGAAGCCAAAATACA+AGG 0.593761 5.1:+79250866 MS.gene38121:CDS
AGCTTCTGAATAAAAGTCCA+AGG 0.594960 5.1:-79253757 None:intergenic
TTCTCTAAGTATATGCTGAA+GGG 0.595569 5.1:+79250794 MS.gene38121:CDS
AATTAAGCTTCAAGATGTAG+AGG 0.596112 5.1:+79251442 MS.gene38121:CDS
TAAAAGAAGTGATAAGGGCA+GGG 0.596770 5.1:+79250336 MS.gene38121:CDS
TAATACCAAATTAAGTTCAG+AGG 0.597446 5.1:+79250291 MS.gene38121:CDS
ATTCAATGACGCCGTTTCAG+CGG 0.599511 5.1:-79249771 None:intergenic
TGTGATTTATCGGAAGCTTG+CGG 0.600229 5.1:-79254284 None:intergenic
GAAACGGCGTCATTGAATAA+CGG 0.603965 5.1:+79249776 MS.gene38121:CDS
GGAGCATAAGGTGAAACTCA+AGG 0.610104 5.1:+79253629 MS.gene38121:CDS
TCAACGACGCAGTTTCAGCA+GGG 0.610163 5.1:-79249886 None:intergenic
TTTGCTCAGGATCTTGGACA+CGG 0.620390 5.1:+79252560 MS.gene38121:CDS
CGCAACAACAGAGGAGACAA+AGG 0.621015 5.1:-79251175 None:intergenic
AATTCTTCACTGGTTACACA+AGG 0.621883 5.1:+79252312 MS.gene38121:CDS
GATAGTGAGCTGCTGGATGG+AGG 0.632324 5.1:+79253178 MS.gene38121:CDS
ACGAGTCTACGACTCGTGAG+TGG 0.637239 5.1:+79251267 MS.gene38121:CDS
TTCGGTTGAAGCTGGTGATG+TGG 0.639253 5.1:+79249805 MS.gene38121:CDS
TCACCAAGTCAGAAATCTGA+AGG 0.640211 5.1:+79253813 MS.gene38121:CDS
CACCTAGAATCTTCCCATCA+CGG 0.641736 5.1:-79251202 None:intergenic
TCATCTTTAGAATGATCCGC+CGG 0.642794 5.1:-79250997 None:intergenic
GGTCGAAACCAACAATGATG+AGG 0.644580 5.1:+79250763 MS.gene38121:CDS
TTTGGTTGAAGCTGGTGATG+TGG 0.646418 5.1:+79249922 MS.gene38121:CDS
GATGATATACACAATAACAC+AGG 0.648393 5.1:+79251512 MS.gene38121:CDS
AACCGGAGAGAAAGAAACGC+GGG 0.649802 5.1:+79250206 MS.gene38121:CDS
GACTTGGTGAGGCAAACCAG+CGG 0.651120 5.1:-79253800 None:intergenic
TCCTGAAATAAATCAGAAGG+AGG 0.651303 5.1:-79252386 None:intergenic
GGGTGGCATGCAAATGGCGA+TGG 0.651622 5.1:+79251299 MS.gene38121:CDS
CACGGAGCTCGCAACAACAG+AGG 0.652177 5.1:-79251184 None:intergenic
ATTGTTTAAAGCCTGACATG+GGG 0.653779 5.1:+79252513 MS.gene38121:CDS
GATAAATCACAGAACTGCCA+AGG 0.654153 5.1:+79254296 MS.gene38121:CDS
GGAGCTACATGGTTATGGGG+AGG 0.658801 5.1:+79253120 MS.gene38121:CDS
GAATCTTGGTGCCAATACGG+TGG 0.660922 5.1:+79249994 MS.gene38121:CDS
AAAGCTAAATATAAAACCGG+CGG 0.661902 5.1:+79250981 MS.gene38121:CDS
GAAAGAGACGTGGTAGCCGG+AGG 0.662313 5.1:+79250169 MS.gene38121:CDS
TGAGTGCTTTCGTTTGACAG+AGG 0.664857 5.1:+79254257 MS.gene38121:CDS
AATCCGGCAACTTCACAGCA+AGG 0.666731 5.1:-79252490 None:intergenic
ATTCTTCACTGGTTACACAA+GGG 0.667170 5.1:+79252313 MS.gene38121:CDS
ACGCGGGAGAAAGAGAAAAG+CGG 0.667642 5.1:+79250222 MS.gene38121:CDS
AAATGGTCTGATCATGAATG+GGG 0.669524 5.1:-79253596 None:intergenic
TAGTGAGCTGCTGGATGGAG+GGG 0.670026 5.1:+79253180 MS.gene38121:CDS
TATACACAATAACACAGGGA+AGG 0.674794 5.1:+79251517 MS.gene38121:CDS
GAGGGAGCTACATGGTTATG+GGG 0.674948 5.1:+79253117 MS.gene38121:CDS
AACTCGGAGATGCAATTCGG+AGG 0.675073 5.1:-79251389 None:intergenic
GGATTGGCGCAATTGGCCTG+AGG 0.678244 5.1:+79252343 MS.gene38121:CDS
GCTGGGAACCAAAAGTCATG+TGG 0.680165 5.1:+79251690 MS.gene38121:CDS
ATGAAGTCAGCATGATGACG+AGG 0.692339 5.1:-79252416 None:intergenic
AGAGGAGACAAAGGTCAAAG+CGG 0.698562 5.1:-79251166 None:intergenic
CGTGATGGGAAGATTCTAGG+TGG 0.699741 5.1:+79251203 MS.gene38121:CDS
TTACAGGTCTGGGAAAACCA+AGG 0.711322 5.1:+79254967 MS.gene38121:intron
TAATTGCATAGATTGGTGTG+AGG 0.719281 5.1:+79251772 MS.gene38121:CDS
AGGGCAGTAGATCTACACCA+TGG 0.727684 5.1:+79251584 MS.gene38121:CDS
AATAAAGGAAGAAAGAGACG+TGG 0.731452 5.1:+79250159 MS.gene38121:CDS
ATGATATACACAATAACACA+GGG 0.732608 5.1:+79251513 MS.gene38121:CDS
CAACCGGAGAGAAAGAAACG+CGG 0.732835 5.1:+79250205 MS.gene38121:CDS
CGAGTATGTATCACACACTG+AGG 0.758612 5.1:+79251244 MS.gene38121:CDS
GCTATGGAGATAATGAAACG+CGG 0.761604 5.1:+79250073 MS.gene38121:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 5.1:+79251622 MS.gene38121:CDS
GCATAAGGTGAAACTCAAGG+AGG 0.774009 5.1:+79253632 MS.gene38121:CDS
GTGAGTGGTCAAGATCTGGG+TGG 0.774532 5.1:+79251282 MS.gene38121:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACATAATCTATAAATAAT+AGG + chr5.1:79253397-79253416 MS.gene38121:intron 10.0%
!! TAGTATTTATAAATATTTCT+TGG + chr5.1:79253666-79253685 MS.gene38121:intron 10.0%
!! AAAAAACTCAAATAATTAAG+AGG - chr5.1:79252662-79252681 None:intergenic 15.0%
!! ATATTAAACAAATAAACATG+TGG - chr5.1:79253541-79253560 None:intergenic 15.0%
!! ATGAAAATAACTAAGTAATA+TGG + chr5.1:79254392-79254411 MS.gene38121:intron 15.0%
!!! AAAGTCTATAAATTTTTTGT+TGG + chr5.1:79253883-79253902 MS.gene38121:intron 15.0%
!!! AATATTTTAGTTTATCTCAT+CGG - chr5.1:79254456-79254475 None:intergenic 15.0%
!!! GATTTTAATAAAGAAAATGA+TGG + chr5.1:79254012-79254031 MS.gene38121:intron 15.0%
!!! TGATATTAACTATGTTTTTT+TGG + chr5.1:79250526-79250545 MS.gene38121:intron 15.0%
!!! TGTAATCTTATCTTTTAAAT+TGG + chr5.1:79252071-79252090 MS.gene38121:intron 15.0%
!!! TTGTTTCTAATTTATTTAAC+CGG + chr5.1:79251868-79251887 MS.gene38121:intron 15.0%
!! AAAATTATTGCTGACAATAA+AGG - chr5.1:79250896-79250915 None:intergenic 20.0%
!! ATAATAACAGCAAAAACTTT+CGG - chr5.1:79252699-79252718 None:intergenic 20.0%
!! GGATTTGTATATTCTTTATA+AGG - chr5.1:79252452-79252471 None:intergenic 20.0%
!! TATAGACTTTATATTCTTCA+TGG - chr5.1:79253873-79253892 None:intergenic 20.0%
!! TTCTAAATCTTTATGATGAA+GGG + chr5.1:79251805-79251824 MS.gene38121:intron 20.0%
!! TTGAAAAATTAGAGAAAGAA+AGG + chr5.1:79254790-79254809 MS.gene38121:CDS 20.0%
!! TTTAGATATTCCTTCAATTT+GGG - chr5.1:79253253-79253272 None:intergenic 20.0%
!! TTTCTAAATCTTTATGATGA+AGG + chr5.1:79251804-79251823 MS.gene38121:intron 20.0%
!!! ATAAACTGCAAAGTATATTT+TGG + chr5.1:79252945-79252964 MS.gene38121:intron 20.0%
!!! ATTTAGAATTGGTTTTTTGA+CGG - chr5.1:79251724-79251743 None:intergenic 20.0%
!!! ATTTTTTTACATTGACTTGT+AGG + chr5.1:79253727-79253746 MS.gene38121:intron 20.0%
!!! TAATTTCATAGTTTGATTTG+TGG + chr5.1:79252872-79252891 MS.gene38121:intron 20.0%
!!! TTCTGCTTTTTCTATTTATA+AGG + chr5.1:79254358-79254377 MS.gene38121:intron 20.0%
! AAATGAACAGATAAATGCAT+TGG - chr5.1:79252783-79252802 None:intergenic 25.0%
! AACAATTTGCAAGAAATCAT+AGG - chr5.1:79254085-79254104 None:intergenic 25.0%
! AAGATTTCATACATTCAACA+AGG - chr5.1:79254619-79254638 None:intergenic 25.0%
! ACTATAGGAAATGAAGTATA+AGG + chr5.1:79250742-79250761 MS.gene38121:intron 25.0%
! ATAAGAAATTCTTGACATGA+TGG - chr5.1:79254685-79254704 None:intergenic 25.0%
! ATGATATACACAATAACACA+GGG + chr5.1:79251513-79251532 MS.gene38121:CDS 25.0%
! ATGATTGCCATTAAATTTAC+AGG + chr5.1:79254951-79254970 MS.gene38121:intron 25.0%
! ATTTGGTATTAAGTTTCTTG+TGG - chr5.1:79250282-79250301 None:intergenic 25.0%
! CAAATTAGAAAGAATTGATC+AGG - chr5.1:79252994-79253013 None:intergenic 25.0%
! CAATGTAAAAGAAGTGATAA+GGG + chr5.1:79250331-79250350 MS.gene38121:CDS 25.0%
! CCAAAAACATATATTGCTTA+TGG + chr5.1:79252536-79252555 MS.gene38121:CDS 25.0%
! CTCAAAGCTAAATATAAAAC+CGG + chr5.1:79250978-79250997 MS.gene38121:CDS 25.0%
! CTGATCAATTCTTTCTAATT+TGG + chr5.1:79252992-79253011 MS.gene38121:intron 25.0%
! CTTATGTCTCAATTTCTTAA+TGG - chr5.1:79253080-79253099 None:intergenic 25.0%
! CTTTAGATATTCCTTCAATT+TGG - chr5.1:79253254-79253273 None:intergenic 25.0%
! GCAAATTTGGATAAATAATC+AGG - chr5.1:79252151-79252170 None:intergenic 25.0%
! GCCAATTACACTAAAAAAAT+TGG - chr5.1:79251955-79251974 None:intergenic 25.0%
! TAATACCAAATTAAGTTCAG+AGG + chr5.1:79250291-79250310 MS.gene38121:CDS 25.0%
! TAGAATAGACTATCAAGTAA+AGG - chr5.1:79252226-79252245 None:intergenic 25.0%
! TCAATGTAAAAGAAGTGATA+AGG + chr5.1:79250330-79250349 MS.gene38121:CDS 25.0%
! TCTAAATCTTTATGATGAAG+GGG + chr5.1:79251806-79251825 MS.gene38121:intron 25.0%
! TGTATATTCTTTATAAGGCA+AGG - chr5.1:79252447-79252466 None:intergenic 25.0%
! TTCTTTCTAATTTGGCTATA+AGG + chr5.1:79253000-79253019 MS.gene38121:intron 25.0%
! TTTCATATATTCTCACATAC+CGG + chr5.1:79254507-79254526 MS.gene38121:intron 25.0%
!! AACTTCATCGTATTTAGAAT+TGG - chr5.1:79251735-79251754 None:intergenic 25.0%
!! AAGATTACATGTTTCGATTT+TGG + chr5.1:79250491-79250510 MS.gene38121:intron 25.0%
!! ACAGATTTTTATACTATCCT+AGG + chr5.1:79251564-79251583 MS.gene38121:CDS 25.0%
!! ATATTTGAAATGTATCCATC+TGG + chr5.1:79250716-79250735 MS.gene38121:intron 25.0%
!! ATATTTTCCTTCTACAACTT+TGG + chr5.1:79253557-79253576 MS.gene38121:intron 25.0%
!! CAGATTTTTATACTATCCTA+GGG + chr5.1:79251565-79251584 MS.gene38121:CDS 25.0%
!! CCATAAGCAATATATGTTTT+TGG - chr5.1:79252539-79252558 None:intergenic 25.0%
!! GAATATACAAATCCTTTTAG+TGG + chr5.1:79252458-79252477 MS.gene38121:CDS 25.0%
!! GTTTGCTTTAAATACTAACT+CGG - chr5.1:79251408-79251427 None:intergenic 25.0%
!! TAAAGGAATACCTTGTATTT+TGG - chr5.1:79250879-79250898 None:intergenic 25.0%
!! TATCACTTCTTTTACATTGA+TGG - chr5.1:79250330-79250349 None:intergenic 25.0%
!! TCTTTTAAACTCATCAATGT+CGG + chr5.1:79250646-79250665 MS.gene38121:intron 25.0%
!! TGTGTTATTGTGTATATCAT+CGG - chr5.1:79251513-79251532 None:intergenic 25.0%
!! TTACTTGATAGTCTATTCTA+TGG + chr5.1:79252226-79252245 MS.gene38121:intron 25.0%
!! TTCTAAATACGATGAAGTTT+TGG + chr5.1:79251736-79251755 MS.gene38121:CDS 25.0%
!!! AATCTAAATTTTAAGAACGC+CGG - chr5.1:79251890-79251909 None:intergenic 25.0%
!!! AGGTGTTAATTTTCTGAAAA+TGG + chr5.1:79253417-79253436 MS.gene38121:intron 25.0%
!!! ATGGCTTCTAAAATAGAATT+TGG + chr5.1:79254031-79254050 MS.gene38121:intron 25.0%
!!! GAGATTTAAGACATTTTCAA+TGG + chr5.1:79251606-79251625 MS.gene38121:CDS 25.0%
!!! GCCAATTTTTTTAGTGTAAT+TGG + chr5.1:79251951-79251970 MS.gene38121:intron 25.0%
AAAAGTGAGTTTGTGATGTA+TGG - chr5.1:79254112-79254131 None:intergenic 30.0%
AAAGCTAAATATAAAACCGG+CGG + chr5.1:79250981-79251000 MS.gene38121:CDS 30.0%
AATATTCGGATGTGAATTAC+AGG + chr5.1:79250946-79250965 MS.gene38121:intron 30.0%
AATGTACTTGAATGTACATC+TGG + chr5.1:79251662-79251681 MS.gene38121:CDS 30.0%
AATTAAGCTTCAAGATGTAG+AGG + chr5.1:79251442-79251461 MS.gene38121:CDS 30.0%
ACCATGATGACATTCATTAT+CGG - chr5.1:79251345-79251364 None:intergenic 30.0%
AGAGAAAAACAAGCTATGAA+TGG + chr5.1:79249860-79249879 MS.gene38121:CDS 30.0%
ATAAATGGTCTGATCATGAA+TGG - chr5.1:79253601-79253620 None:intergenic 30.0%
ATGCTCCATAGTCAAATAAA+TGG - chr5.1:79253616-79253635 None:intergenic 30.0%
ATTTCCTATAGTAAACCAGA+TGG - chr5.1:79250734-79250753 None:intergenic 30.0%
CAAATTTGCCTAACATTCTT+GGG + chr5.1:79252162-79252181 MS.gene38121:intron 30.0%
CTGAAATGTAGAACTGAAAT+AGG - chr5.1:79254655-79254674 None:intergenic 30.0%
GAAAAACAAGCTATGAATCT+TGG + chr5.1:79249980-79249999 MS.gene38121:CDS 30.0%
GAAAATGTCTTAAATCTCCA+TGG - chr5.1:79251604-79251623 None:intergenic 30.0%
GACTATCAAGTAAACAAACT+GGG - chr5.1:79252121-79252140 None:intergenic 30.0%
GATGATATACACAATAACAC+AGG + chr5.1:79251512-79251531 MS.gene38121:CDS 30.0%
GTTGAATAACGGTGAAAATT+TGG + chr5.1:79249904-79249923 MS.gene38121:CDS 30.0%
TAAATGGTCTGATCATGAAT+GGG - chr5.1:79253600-79253619 None:intergenic 30.0%
TAAGATGCACAAAATGCAAA+CGG + chr5.1:79250362-79250381 MS.gene38121:CDS 30.0%
TACATTACCAAAGTTGTAGA+AGG - chr5.1:79253567-79253586 None:intergenic 30.0%
TCAGACCATTTATTTGACTA+TGG + chr5.1:79253608-79253627 MS.gene38121:CDS 30.0%
TGAAGAACAAATGATTGAGA+AGG + chr5.1:79250844-79250863 MS.gene38121:CDS 30.0%
TGACTATCAAGTAAACAAAC+TGG - chr5.1:79252122-79252141 None:intergenic 30.0%
TTAATGGCAGTAATTTCCTT+AGG - chr5.1:79253064-79253083 None:intergenic 30.0%
TTAGTGTAATTGGCATATGT+TGG + chr5.1:79251961-79251980 MS.gene38121:intron 30.0%
TTATTTGACTATGGAGCATA+AGG + chr5.1:79253617-79253636 MS.gene38121:CDS 30.0%
TTCTCTAAGTATATGCTGAA+GGG + chr5.1:79250794-79250813 MS.gene38121:CDS 30.0%
! TATTGTTTAAAGCCTGACAT+GGG + chr5.1:79252512-79252531 MS.gene38121:CDS 30.0%
! TTATTGTTTAAAGCCTGACA+TGG + chr5.1:79252511-79252530 MS.gene38121:CDS 30.0%
!! ACACTAAAAAAATTGGCTTG+AGG - chr5.1:79251948-79251967 None:intergenic 30.0%
!! AGGTGTTGAAATTGAAAGAT+TGG + chr5.1:79252363-79252382 MS.gene38121:CDS 30.0%
!! CACAAACTCACTTTTATTTC+AGG + chr5.1:79254117-79254136 MS.gene38121:intron 30.0%
!! TCAGGCTTTAAACAATAATC+CGG - chr5.1:79252509-79252528 None:intergenic 30.0%
!! TTCTACAACTTTGGTAATGT+AGG + chr5.1:79253566-79253585 MS.gene38121:intron 30.0%
!!! ATAAATTTTTTGTTGGAGCG+AGG + chr5.1:79253890-79253909 MS.gene38121:intron 30.0%
!!! ATAGCTTGTTTTTCTCTATC+AGG - chr5.1:79249857-79249876 None:intergenic 30.0%
!!! GTTTTAACTCTCTTGTTGTT+GGG - chr5.1:79253961-79253980 None:intergenic 30.0%
!!! TAGTTTGATTTGTGGTGTTT+TGG + chr5.1:79252880-79252899 MS.gene38121:intron 30.0%
!!! TATGTACTGTTTTTTCCTGA+TGG + chr5.1:79254713-79254732 MS.gene38121:intron 30.0%
!!! TGTTTTAACTCTCTTGTTGT+TGG - chr5.1:79253962-79253981 None:intergenic 30.0%
!!! TTTTCCATTATCTAGCTCTA+CGG + chr5.1:79253341-79253360 MS.gene38121:intron 30.0%
!!! TTTTTGGTTGTGTCTTGTTA+AGG + chr5.1:79250542-79250561 MS.gene38121:intron 30.0%
AAATACCTCAAACTTGTCCT+TGG - chr5.1:79254316-79254335 None:intergenic 35.0%
AAATGGTCTGATCATGAATG+GGG - chr5.1:79253599-79253618 None:intergenic 35.0%
AATAAAGGAAGAAAGAGACG+TGG + chr5.1:79250159-79250178 MS.gene38121:CDS 35.0%
AATATCCACCAATTCTTCAC+TGG + chr5.1:79252302-79252321 MS.gene38121:CDS 35.0%
ACACTTCCTACTTTGAATGT+TGG + chr5.1:79249746-79249765 MS.gene38121:CDS 35.0%
ACATCGCTCTCATTCAATTT+AGG - chr5.1:79250571-79250590 None:intergenic 35.0%
AGAAATTCAGAAGAGGAAGA+TGG + chr5.1:79250111-79250130 MS.gene38121:CDS 35.0%
AGAAGATGTACCCAAATTGA+AGG + chr5.1:79253240-79253259 MS.gene38121:CDS 35.0%
AGCTTCTGAATAAAAGTCCA+AGG - chr5.1:79253760-79253779 None:intergenic 35.0%
AGGCTGTTAATTGCATAGAT+TGG + chr5.1:79251765-79251784 MS.gene38121:CDS 35.0%
AGTACATTGCTGACAATTAC+AGG - chr5.1:79251650-79251669 None:intergenic 35.0%
ATAATTAAGAGGCTCATGAC+AGG - chr5.1:79252651-79252670 None:intergenic 35.0%
ATATATTCTCACATACCGGA+GGG + chr5.1:79254511-79254530 MS.gene38121:intron 35.0%
ATTGAATAACGGTGAAGCTT+CGG + chr5.1:79249787-79249806 MS.gene38121:CDS 35.0%
CCAAATTTGCCTAACATTCT+TGG + chr5.1:79252161-79252180 MS.gene38121:intron 35.0%
CCAAGAATGTTAGGCAAATT+TGG - chr5.1:79252164-79252183 None:intergenic 35.0%
CCTGTTTGAACAAATGGTAA+GGG + chr5.1:79250401-79250420 MS.gene38121:intron 35.0%
CCTTACCATTTGTTCAAACA+GGG - chr5.1:79250403-79250422 None:intergenic 35.0%
CGTTCCTGAAATAAATCAGA+AGG - chr5.1:79252392-79252411 None:intergenic 35.0%
CTCATGACAGGAAAATCAAA+AGG - chr5.1:79252639-79252658 None:intergenic 35.0%
CTGCATCAAACACATTACTA+TGG - chr5.1:79252604-79252623 None:intergenic 35.0%
CTGTTTGAACAAATGGTAAG+GGG + chr5.1:79250402-79250421 MS.gene38121:intron 35.0%
GAAAAACAAGCTATGAATGG+TGG + chr5.1:79249863-79249882 MS.gene38121:CDS 35.0%
GAAAGAGAAGCCAAAATACA+AGG + chr5.1:79250866-79250885 MS.gene38121:CDS 35.0%
GACTTCTTCCACATTTAAGA+CGG + chr5.1:79250816-79250835 MS.gene38121:CDS 35.0%
GAGCAAGCTTGCATATATAA+CGG + chr5.1:79254539-79254558 MS.gene38121:intron 35.0%
GCCATTAAATTTACAGGTCT+GGG + chr5.1:79254957-79254976 MS.gene38121:intron 35.0%
GGATTCCTCTGAACTTAATT+TGG - chr5.1:79250299-79250318 None:intergenic 35.0%
GGTCTAAATTTCTTGATGTC+TGG + chr5.1:79252092-79252111 MS.gene38121:intron 35.0%
GTCATCACACTGTACAAATT+AGG - chr5.1:79254063-79254082 None:intergenic 35.0%
GTTCTCTAAGTATATGCTGA+AGG + chr5.1:79250793-79250812 MS.gene38121:CDS 35.0%
GTTGTTAGTGAGCAGAATAA+AGG + chr5.1:79250144-79250163 MS.gene38121:CDS 35.0%
TAAAAGAAGTGATAAGGGCA+GGG + chr5.1:79250336-79250355 MS.gene38121:CDS 35.0%
TAAAGTGGAACTGAAACCTA+AGG + chr5.1:79253045-79253064 MS.gene38121:CDS 35.0%
TAACTCGCTTCATATTGTGT+TGG + chr5.1:79250454-79250473 MS.gene38121:intron 35.0%
TAATTGCATAGATTGGTGTG+AGG + chr5.1:79251772-79251791 MS.gene38121:CDS 35.0%
TAGAGGAGACTTGTGATAAT+AGG + chr5.1:79251459-79251478 MS.gene38121:CDS 35.0%
TATACACAATAACACAGGGA+AGG + chr5.1:79251517-79251536 MS.gene38121:CDS 35.0%
TCCCAGACCTGTAAATTTAA+TGG - chr5.1:79254961-79254980 None:intergenic 35.0%
TCCTGAAATAAATCAGAAGG+AGG - chr5.1:79252389-79252408 None:intergenic 35.0%
TCTTTCAATTTCAACACCTC+AGG - chr5.1:79252362-79252381 None:intergenic 35.0%
TGCCATTAAATTTACAGGTC+TGG + chr5.1:79254956-79254975 MS.gene38121:intron 35.0%
TTAAGTTTCTTGTGGACTTG+TGG - chr5.1:79250274-79250293 None:intergenic 35.0%
TTACCTTCAGATTTCTGACT+TGG - chr5.1:79253819-79253838 None:intergenic 35.0%
TTAGCAGCAGAGAAAGTAAA+TGG - chr5.1:79253380-79253399 None:intergenic 35.0%
TTAGTGTGATTGCAAACTTC+AGG + chr5.1:79254813-79254832 MS.gene38121:intron 35.0%
TTGGCAGTTCTGTGATTTAT+CGG - chr5.1:79254297-79254316 None:intergenic 35.0%
TTGTGTAACCAGTGAAGAAT+TGG - chr5.1:79252313-79252332 None:intergenic 35.0%
TTTGTCTCTCCTGAACATAT+TGG + chr5.1:79254234-79254253 MS.gene38121:CDS 35.0%
! AATGTACATCTGGTTTAAGC+TGG + chr5.1:79251672-79251691 MS.gene38121:CDS 35.0%
! AATTCTTCACTGGTTACACA+AGG + chr5.1:79252312-79252331 MS.gene38121:CDS 35.0%
! ATGTACATCTGGTTTAAGCT+GGG + chr5.1:79251673-79251692 MS.gene38121:CDS 35.0%
! ATTCTTCACTGGTTACACAA+GGG + chr5.1:79252313-79252332 MS.gene38121:CDS 35.0%
! ATTGTTTAAAGCCTGACATG+GGG + chr5.1:79252513-79252532 MS.gene38121:CDS 35.0%
! CTTGTTCGATTTTCTGTCAA+AGG + chr5.1:79254877-79254896 MS.gene38121:intron 35.0%
! GTATCCATCTGGTTTACTAT+AGG + chr5.1:79250727-79250746 MS.gene38121:intron 35.0%
! GTATGACAATTTTCTTCACC+TGG - chr5.1:79254752-79254771 None:intergenic 35.0%
! GTTTTGCAGAAATTCAGAAG+AGG + chr5.1:79250104-79250123 MS.gene38121:CDS 35.0%
! TAAGACATTTTCAATGGCAC+TGG + chr5.1:79251612-79251631 MS.gene38121:CDS 35.0%
! TATTGCTTATGGATTTGCTC+AGG + chr5.1:79252547-79252566 MS.gene38121:CDS 35.0%
! TGGACTTTTATTCAGAAGCT+AGG + chr5.1:79253760-79253779 MS.gene38121:CDS 35.0%
!! CAGTTTTGTAGAGTTCAGTT+AGG - chr5.1:79251916-79251935 None:intergenic 35.0%
!! CATCGGATTAGTTTCTTACT+TGG - chr5.1:79254439-79254458 None:intergenic 35.0%
!! GCTGATTTTACCTGCTTTAA+AGG - chr5.1:79253313-79253332 None:intergenic 35.0%
!! TATGAATCTTGGTGCCAATA+CGG + chr5.1:79249991-79250010 MS.gene38121:CDS 35.0%
!! TATGATGAAGGGGTTCTAAA+TGG + chr5.1:79251816-79251835 MS.gene38121:intron 35.0%
!! TATTTAGCTTTGAGAGTGAG+AGG - chr5.1:79250972-79250991 None:intergenic 35.0%
!! TTTCTTGGTAGTTTGTTGAG+CGG + chr5.1:79253681-79253700 MS.gene38121:intron 35.0%
!!! ATAGCTTGTTTTTCTCGATC+AGG - chr5.1:79249974-79249993 None:intergenic 35.0%
!!! GTGCTCTTTGGGATATTTTT+CGG + chr5.1:79253215-79253234 MS.gene38121:CDS 35.0%
!!! TGACATTCATTATCGGCTTT+TGG - chr5.1:79251338-79251357 None:intergenic 35.0%
AACAGATTCTTCTGCTACTG+CGG - chr5.1:79249951-79249970 None:intergenic 40.0%
AAGCACTCACCAATATGTTC+AGG - chr5.1:79254246-79254265 None:intergenic 40.0%
AAGTGTTTCATCGTCAGGAA+TGG - chr5.1:79249732-79249751 None:intergenic 40.0%
ACAATTCGCCCAAGAATGTT+AGG - chr5.1:79252173-79252192 None:intergenic 40.0%
ACTAACTCGGAGATGCAATT+CGG - chr5.1:79251395-79251414 None:intergenic 40.0%
AGAAAGTAAATGGTCACGAG+GGG - chr5.1:79253370-79253389 None:intergenic 40.0%
AGAGAAAGTAAATGGTCACG+AGG - chr5.1:79253372-79253391 None:intergenic 40.0%
AGGTTGAGAGAACCACTAAA+AGG - chr5.1:79252473-79252492 None:intergenic 40.0%
AGTGTTTCATCGTCAGGAAT+GGG - chr5.1:79249731-79249750 None:intergenic 40.0%
ATATCATCGGCGTTACTAAC+AGG - chr5.1:79251500-79251519 None:intergenic 40.0%
ATGGTTTCCTTGAACTGAGA+AGG + chr5.1:79251360-79251379 MS.gene38121:CDS 40.0%
CATATATTCTCACATACCGG+AGG + chr5.1:79254510-79254529 MS.gene38121:intron 40.0%
CCCTGTTTGAACAAATGGTA+AGG + chr5.1:79250400-79250419 MS.gene38121:intron 40.0%
CCCTTACCATTTGTTCAAAC+AGG - chr5.1:79250404-79250423 None:intergenic 40.0%
GAAACGGCGTCATTGAATAA+CGG + chr5.1:79249776-79249795 MS.gene38121:CDS 40.0%
GAAACTGCGTCGTTGAATAA+CGG + chr5.1:79249893-79249912 MS.gene38121:CDS 40.0%
GAGAAAGTAAATGGTCACGA+GGG - chr5.1:79253371-79253390 None:intergenic 40.0%
GATAAATCACAGAACTGCCA+AGG + chr5.1:79254296-79254315 MS.gene38121:CDS 40.0%
GATACATACTCGAGCTCAAT+TGG - chr5.1:79251236-79251255 None:intergenic 40.0%
GCATACCCTGTTTGAACAAA+TGG + chr5.1:79250395-79250414 MS.gene38121:CDS 40.0%
GCCGATAATGAATGTCATCA+TGG + chr5.1:79251341-79251360 MS.gene38121:CDS 40.0%
GCCTCCTTCTGATTTATTTC+AGG + chr5.1:79252385-79252404 MS.gene38121:CDS 40.0%
GCTATGGAGATAATGAAACG+CGG + chr5.1:79250073-79250092 MS.gene38121:CDS 40.0%
GGTGAAAATTTGGTTGAAGC+TGG + chr5.1:79249914-79249933 MS.gene38121:CDS 40.0%
GTAAAAGAAGTGATAAGGGC+AGG + chr5.1:79250335-79250354 MS.gene38121:CDS 40.0%
TCACCAAGTCAGAAATCTGA+AGG + chr5.1:79253813-79253832 MS.gene38121:CDS 40.0%
TCATCCAACCGTCTTAAATG+TGG - chr5.1:79250827-79250846 None:intergenic 40.0%
TGATCTGGTAAGGACTGATT+TGG + chr5.1:79251025-79251044 MS.gene38121:intron 40.0%
TGTAACCAGTGAAGAATTGG+TGG - chr5.1:79252310-79252329 None:intergenic 40.0%
TGTGATTTATCGGAAGCTTG+CGG - chr5.1:79254287-79254306 None:intergenic 40.0%
TTGCAATTATCACAGCACAC+AGG - chr5.1:79250607-79250626 None:intergenic 40.0%
! GAAGTATCCTTCTCAGTTCA+AGG - chr5.1:79251370-79251389 None:intergenic 40.0%
! GACTTGTGGAACCTCATTTT+CGG - chr5.1:79250260-79250279 None:intergenic 40.0%
! TATGGATTTGCTCAGGATCT+TGG + chr5.1:79252554-79252573 MS.gene38121:CDS 40.0%
! TCTTCCACATTTAAGACGGT+TGG + chr5.1:79250820-79250839 MS.gene38121:CDS 40.0%
! TTCTTCACTGGTTACACAAG+GGG + chr5.1:79252314-79252333 MS.gene38121:CDS 40.0%
! TTTACATTGATGGCACGCTA+AGG - chr5.1:79250320-79250339 None:intergenic 40.0%
!! AACAGACTCTTCTGTTTCTG+CGG - chr5.1:79249834-79249853 None:intergenic 40.0%
!! TCATCTTTAGAATGATCCGC+CGG - chr5.1:79251000-79251019 None:intergenic 40.0%
!! TCTCTTGTTGTTGGGTACAA+AGG - chr5.1:79253953-79253972 None:intergenic 40.0%
!! TTCAGATTTCTGACTTGGTG+AGG - chr5.1:79253814-79253833 None:intergenic 40.0%
!!! CGATGAAGTTTTGGATGTGA+AGG + chr5.1:79251745-79251764 MS.gene38121:CDS 40.0%
!!! TCATTATCGGCTTTTGGACA+GGG - chr5.1:79251332-79251351 None:intergenic 40.0%
!!! TTCATTATCGGCTTTTGGAC+AGG - chr5.1:79251333-79251352 None:intergenic 40.0%
!!! TTTTTTGCAGTCGTGCATCA+AGG + chr5.1:79254200-79254219 MS.gene38121:intron 40.0%
AACTGCCAAGGACAAGTTTG+AGG + chr5.1:79254308-79254327 MS.gene38121:CDS 45.0%
AAGAGGGAGCTACATGGTTA+TGG + chr5.1:79253115-79253134 MS.gene38121:CDS 45.0%
ACAAAGTGAAACAGCAGCTG+CGG - chr5.1:79250433-79250452 None:intergenic 45.0%
AGAGGAGACAAAGGTCAAAG+CGG - chr5.1:79251169-79251188 None:intergenic 45.0%
AGAGGGAGCTACATGGTTAT+GGG + chr5.1:79253116-79253135 MS.gene38121:CDS 45.0%
AGCACCTTGAGCAAGATAAG+AGG + chr5.1:79253098-79253117 MS.gene38121:CDS 45.0%
AGGCTCTTCATCAGTTCAAC+CGG + chr5.1:79250189-79250208 MS.gene38121:CDS 45.0%
ATATAACGGCGTTGCTCAGA+TGG + chr5.1:79254553-79254572 MS.gene38121:intron 45.0%
ATTCAATGACGCCGTTTCAG+CGG - chr5.1:79249774-79249793 None:intergenic 45.0%
CAAGATAAGAGGGAGCTACA+TGG + chr5.1:79253109-79253128 MS.gene38121:CDS 45.0%
CACCTAGAATCTTCCCATCA+CGG - chr5.1:79251205-79251224 None:intergenic 45.0%
CGAGTATGTATCACACACTG+AGG + chr5.1:79251244-79251263 MS.gene38121:CDS 45.0%
CTAAAGATGAGCGTGTGATC+TGG + chr5.1:79251010-79251029 MS.gene38121:CDS 45.0%
CTCGACTTCCTCATCATTGT+TGG - chr5.1:79250774-79250793 None:intergenic 45.0%
GAAGGAATCCACCGAAAATG+AGG + chr5.1:79250246-79250265 MS.gene38121:CDS 45.0%
GAGAAAGAGAAAAGCGGAGA+AGG + chr5.1:79250228-79250247 MS.gene38121:CDS 45.0%
GATGTAGTTACCAGTCGAAG+AGG + chr5.1:79253502-79253521 MS.gene38121:intron 45.0%
GCACCTTGAGCAAGATAAGA+GGG + chr5.1:79253099-79253118 MS.gene38121:CDS 45.0%
GCATCCGTAGAGCTAGATAA+TGG - chr5.1:79253348-79253367 None:intergenic 45.0%
GGTCGAAACCAACAATGATG+AGG + chr5.1:79250763-79250782 MS.gene38121:CDS 45.0%
GTTGACGCATATCGCTAAAG+TGG + chr5.1:79253030-79253049 MS.gene38121:CDS 45.0%
TGAGTGCTTTCGTTTGACAG+AGG + chr5.1:79254257-79254276 MS.gene38121:CDS 45.0%
TTACAGGTCTGGGAAAACCA+AGG + chr5.1:79254967-79254986 MS.gene38121:intron 45.0%
TTACCAGTCGAAGAGGTCAT+TGG + chr5.1:79253509-79253528 MS.gene38121:intron 45.0%
TTCCTCGGTTAAAGCTGCTA+TGG + chr5.1:79250057-79250076 MS.gene38121:CDS 45.0%
TTGAACTGATGAAGAGCCTC+CGG - chr5.1:79250188-79250207 None:intergenic 45.0%
TTTGCTCAGGATCTTGGACA+CGG + chr5.1:79252560-79252579 MS.gene38121:CDS 45.0%
! AATGATAGTGAGCTGCTGGA+TGG + chr5.1:79253175-79253194 MS.gene38121:CDS 45.0%
! AATGCACGCCACATGACTTT+TGG - chr5.1:79251701-79251720 None:intergenic 45.0%
! ATGAAGTCAGCATGATGACG+AGG - chr5.1:79252419-79252438 None:intergenic 45.0%
! CACTAATGATAGTGAGCTGC+TGG + chr5.1:79253171-79253190 MS.gene38121:CDS 45.0%
! GAATGGGTTCTTCTTGGTCT+GGG - chr5.1:79249715-79249734 None:intergenic 45.0%
! GGCATTTTGTACAGCTTCTG+TGG - chr5.1:79251148-79251167 None:intergenic 45.0%
! TCGCTTCATATTGTGTTGGC+TGG + chr5.1:79250458-79250477 MS.gene38121:intron 45.0%
! TTCAATGGCACTGGAGCAAA+GGG + chr5.1:79251621-79251640 MS.gene38121:CDS 45.0%
! TTGTGGAACCTCATTTTCGG+TGG - chr5.1:79250257-79250276 None:intergenic 45.0%
! TTTCAATGGCACTGGAGCAA+AGG + chr5.1:79251620-79251639 MS.gene38121:CDS 45.0%
! TTTGGTTGAAGCTGGTGATG+TGG + chr5.1:79249922-79249941 MS.gene38121:CDS 45.0%
! TTTTCCTGATGGCTGCTTCT+TGG + chr5.1:79254724-79254743 MS.gene38121:intron 45.0%
!! AAATTGGCTTGAGGCTCACA+CGG - chr5.1:79251939-79251958 None:intergenic 45.0%
!! ATCCCAAAGAGCACCTTCTA+AGG - chr5.1:79253209-79253228 None:intergenic 45.0%
!! ATCCCTTAGAAGGTGCTCTT+TGG + chr5.1:79253203-79253222 MS.gene38121:CDS 45.0%
!! CAATCGCAGTCCTTTAAAGC+AGG + chr5.1:79253300-79253319 MS.gene38121:CDS 45.0%
!! GTAGGAAGTGTTTCATCGTC+AGG - chr5.1:79249737-79249756 None:intergenic 45.0%
!! TCCCAAAGAGCACCTTCTAA+GGG - chr5.1:79253208-79253227 None:intergenic 45.0%
!! TCCCTTAGAAGGTGCTCTTT+GGG + chr5.1:79253204-79253223 MS.gene38121:CDS 45.0%
!!! TATGTTTTTGGCCCCATGTC+AGG - chr5.1:79252527-79252546 None:intergenic 45.0%
!!! TCATTTTATAATTTAATATT+CGG + chr5.1:79250932-79250951 MS.gene38121:intron 5.0%
AAAGTGAAACAGCAGCTGCG+GGG - chr5.1:79250431-79250450 None:intergenic 50.0%
AACCGGAGAGAAAGAAACGC+GGG + chr5.1:79250206-79250225 MS.gene38121:CDS 50.0%
AACTCGGAGATGCAATTCGG+AGG - chr5.1:79251392-79251411 None:intergenic 50.0%
AATCCGGCAACTTCACAGCA+AGG - chr5.1:79252493-79252512 None:intergenic 50.0%
ACAGCACACAGGACATGCTT+CGG - chr5.1:79250596-79250615 None:intergenic 50.0%
ACGCGGGAGAAAGAGAAAAG+CGG + chr5.1:79250222-79250241 MS.gene38121:CDS 50.0%
ACTCGTGAGTGGTCAAGATC+TGG + chr5.1:79251278-79251297 MS.gene38121:CDS 50.0%
AGATCTGGGTGGCATGCAAA+TGG + chr5.1:79251293-79251312 MS.gene38121:CDS 50.0%
AGGGCAGTAGATCTACACCA+TGG + chr5.1:79251584-79251603 MS.gene38121:CDS 50.0%
ATAGTGAGCTGCTGGATGGA+GGG + chr5.1:79253179-79253198 MS.gene38121:CDS 50.0%
CAAAGTGAAACAGCAGCTGC+GGG - chr5.1:79250432-79250451 None:intergenic 50.0%
CAACCAATGACCTCTTCGAC+TGG - chr5.1:79253515-79253534 None:intergenic 50.0%
CAACCGGAGAGAAAGAAACG+CGG + chr5.1:79250205-79250224 MS.gene38121:CDS 50.0%
CGCAACAACAGAGGAGACAA+AGG - chr5.1:79251178-79251197 None:intergenic 50.0%
CTCGTGAGTGGTCAAGATCT+GGG + chr5.1:79251279-79251298 MS.gene38121:CDS 50.0%
GAAGAAAGAGACGTGGTAGC+CGG + chr5.1:79250166-79250185 MS.gene38121:CDS 50.0%
GACTTGTAGGAGTCGAACCT+TGG + chr5.1:79253740-79253759 MS.gene38121:intron 50.0%
GAGGGAGCTACATGGTTATG+GGG + chr5.1:79253117-79253136 MS.gene38121:CDS 50.0%
GATGAGCGTGTGATCTGGTA+AGG + chr5.1:79251015-79251034 MS.gene38121:intron 50.0%
GCTCCCTCTTATCTTGCTCA+AGG - chr5.1:79253105-79253124 None:intergenic 50.0%
GCTGGGAACCAAAAGTCATG+TGG + chr5.1:79251690-79251709 MS.gene38121:CDS 50.0%
GGACGATGAAATGGCAGCTA+GGG + chr5.1:79250030-79250049 MS.gene38121:CDS 50.0%
TCAACGACGCAGTTTCAGCA+GGG - chr5.1:79249889-79249908 None:intergenic 50.0%
TGGTGTAGATCTACTGCCCT+AGG - chr5.1:79251584-79251603 None:intergenic 50.0%
TTCAACGACGCAGTTTCAGC+AGG - chr5.1:79249890-79249909 None:intergenic 50.0%
TTGCTCAGGATCTTGGACAC+GGG + chr5.1:79252561-79252580 MS.gene38121:CDS 50.0%
! CAACCTTGCTGTGAAGTTGC+CGG + chr5.1:79252487-79252506 MS.gene38121:CDS 50.0%
! CGTCAGGAATGGGTTCTTCT+TGG - chr5.1:79249721-79249740 None:intergenic 50.0%
! CGTGATGGGAAGATTCTAGG+TGG + chr5.1:79251203-79251222 MS.gene38121:CDS 50.0%
! CTCCATAGCAGCTTTAACCG+AGG - chr5.1:79250062-79250081 None:intergenic 50.0%
! CTCCGTGATGGGAAGATTCT+AGG + chr5.1:79251200-79251219 MS.gene38121:CDS 50.0%
! GCTGTTGACGGACGATGAAA+TGG + chr5.1:79250021-79250040 MS.gene38121:CDS 50.0%
! GGAATGGGTTCTTCTTGGTC+TGG - chr5.1:79249716-79249735 None:intergenic 50.0%
! TCAATGGCACTGGAGCAAAG+GGG + chr5.1:79251622-79251641 MS.gene38121:CDS 50.0%
! TTCGGTTGAAGCTGGTGATG+TGG + chr5.1:79249805-79249824 MS.gene38121:CDS 50.0%
!! GAATCTTGGTGCCAATACGG+TGG + chr5.1:79249994-79250013 MS.gene38121:CDS 50.0%
AAGTGAAACAGCAGCTGCGG+GGG - chr5.1:79250430-79250449 None:intergenic 55.0%
ACACAAGGGGTCGCAAGGAT+TGG + chr5.1:79252327-79252346 MS.gene38121:CDS 55.0%
ACGAGTCTACGACTCGTGAG+TGG + chr5.1:79251267-79251286 MS.gene38121:CDS 55.0%
CAACAGCGACTCCACCGTAT+TGG - chr5.1:79250008-79250027 None:intergenic 55.0%
CGGACGATGAAATGGCAGCT+AGG + chr5.1:79250029-79250048 MS.gene38121:CDS 55.0%
CTCCCGCGTTTCTTTCTCTC+CGG - chr5.1:79250211-79250230 None:intergenic 55.0%
GAATGTTGGCGCCGCTGAAA+CGG + chr5.1:79249760-79249779 MS.gene38121:CDS 55.0%
GATAGTGAGCTGCTGGATGG+AGG + chr5.1:79253178-79253197 MS.gene38121:CDS 55.0%
GATGCTGTTGTCATTCCCGC+TGG + chr5.1:79253784-79253803 MS.gene38121:CDS 55.0%
GATGGAGGGGATCCCTTAGA+AGG + chr5.1:79253193-79253212 MS.gene38121:CDS 55.0%
GATGGCTGCTTCTTGGTACC+AGG + chr5.1:79254731-79254750 MS.gene38121:intron 55.0%
GCGGCGCCAACATTCAAAGT+AGG - chr5.1:79249755-79249774 None:intergenic 55.0%
GGAGCTACATGGTTATGGGG+AGG + chr5.1:79253120-79253139 MS.gene38121:CDS 55.0%
GGCAGCTAGGGATTCTTCCT+CGG + chr5.1:79250042-79250061 MS.gene38121:CDS 55.0%
GGTACCAAGAAGCAGCCATC+AGG - chr5.1:79254731-79254750 None:intergenic 55.0%
GGTGAAGCTTCGGTTGAAGC+TGG + chr5.1:79249797-79249816 MS.gene38121:CDS 55.0%
GTGAGTGGTCAAGATCTGGG+TGG + chr5.1:79251282-79251301 MS.gene38121:CDS 55.0%
GTTGTTGCGAGCTCCGTGAT+GGG + chr5.1:79251189-79251208 MS.gene38121:CDS 55.0%
TACGGTGGAGTCGCTGTTGA+CGG + chr5.1:79250009-79250028 MS.gene38121:CDS 55.0%
TAGTGAGCTGCTGGATGGAG+GGG + chr5.1:79253180-79253199 MS.gene38121:CDS 55.0%
TGGTTACACAAGGGGTCGCA+AGG + chr5.1:79252322-79252341 MS.gene38121:CDS 55.0%
TGTTGTTGCGAGCTCCGTGA+TGG + chr5.1:79251188-79251207 MS.gene38121:CDS 55.0%
! AAGCTTGCTCACTTGCCCTC+CGG - chr5.1:79254529-79254548 None:intergenic 55.0%
! ACTTGGTGAGGCAAACCAGC+GGG - chr5.1:79253802-79253821 None:intergenic 55.0%
! GTCGCAAGGATTGGCGCAAT+TGG + chr5.1:79252336-79252355 MS.gene38121:CDS 55.0%
!! GACTTGGTGAGGCAAACCAG+CGG - chr5.1:79253803-79253822 None:intergenic 55.0%
CACGGAGCTCGCAACAACAG+AGG - chr5.1:79251187-79251206 None:intergenic 60.0%
GAAAGAGACGTGGTAGCCGG+AGG + chr5.1:79250169-79250188 MS.gene38121:CDS 60.0%
GGGTGGCATGCAAATGGCGA+TGG + chr5.1:79251299-79251318 MS.gene38121:CDS 60.0%
! GGATTGGCGCAATTGGCCTG+AGG + chr5.1:79252343-79252362 MS.gene38121:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 79249647 79255000 79249647 ID=MS.gene38121
chr5.1 mRNA 79249647 79255000 79249647 ID=MS.gene38121.t1;Parent=MS.gene38121
chr5.1 exon 79249647 79250416 79249647 ID=MS.gene38121.t1.exon1;Parent=MS.gene38121.t1
chr5.1 CDS 79249647 79250416 79249647 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
chr5.1 exon 79250564 79250606 79250564 ID=MS.gene38121.t1.exon2;Parent=MS.gene38121.t1
chr5.1 CDS 79250564 79250606 79250564 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
chr5.1 exon 79250749 79250887 79250749 ID=MS.gene38121.t1.exon3;Parent=MS.gene38121.t1
chr5.1 CDS 79250749 79250887 79250749 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
chr5.1 exon 79250968 79251031 79250968 ID=MS.gene38121.t1.exon4;Parent=MS.gene38121.t1
chr5.1 CDS 79250968 79251031 79250968 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
chr5.1 exon 79251115 79251793 79251115 ID=MS.gene38121.t1.exon5;Parent=MS.gene38121.t1
chr5.1 CDS 79251115 79251793 79251115 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
chr5.1 exon 79252293 79252622 79252293 ID=MS.gene38121.t1.exon6;Parent=MS.gene38121.t1
chr5.1 CDS 79252293 79252622 79252293 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
chr5.1 exon 79253022 79253321 79253022 ID=MS.gene38121.t1.exon7;Parent=MS.gene38121.t1
chr5.1 CDS 79253022 79253321 79253022 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
chr5.1 exon 79253588 79253660 79253588 ID=MS.gene38121.t1.exon8;Parent=MS.gene38121.t1
chr5.1 CDS 79253588 79253660 79253588 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
chr5.1 exon 79253749 79253834 79253749 ID=MS.gene38121.t1.exon9;Parent=MS.gene38121.t1
chr5.1 CDS 79253749 79253834 79253749 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
chr5.1 exon 79254210 79254329 79254210 ID=MS.gene38121.t1.exon10;Parent=MS.gene38121.t1
chr5.1 CDS 79254210 79254329 79254210 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
chr5.1 exon 79254753 79254811 79254753 ID=MS.gene38121.t1.exon11;Parent=MS.gene38121.t1
chr5.1 CDS 79254753 79254811 79254753 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
chr5.1 exon 79254973 79255000 79254973 ID=MS.gene38121.t1.exon12;Parent=MS.gene38121.t1
chr5.1 CDS 79254973 79255000 79254973 ID=cds.MS.gene38121.t1;Parent=MS.gene38121.t1
Gene Sequence

>MS.gene38121

ATGGCGGAGGAAGAGAACAACGAAATTGTCACTTATAGAGTGAAAATCAAAGTCACACTCATTGTCCCAGACCAAGAAGAACCCATTCCTGACGATGAAACACTTCCTACTTTGAATGTTGGCGCCGCTGAAACGGCGTCATTGAATAACGGTGAAGCTTCGGTTGAAGCTGGTGATGTGGCAGCCGCAGAAACAGAAGAGTCTGTTCCTGATAGAGAAAAACAAGCTATGAATGGTGGCCCTGCTGAAACTGCGTCGTTGAATAACGGTGAAAATTTGGTTGAAGCTGGTGATGTGGCAGCCGCAGTAGCAGAAGAATCTGTTCCTGATCGAGAAAAACAAGCTATGAATCTTGGTGCCAATACGGTGGAGTCGCTGTTGACGGACGATGAAATGGCAGCTAGGGATTCTTCCTCGGTTAAAGCTGCTATGGAGATAATGAAACGCGGAAGAAAGAGTTTTGCAGAAATTCAGAAGAGGAAGATGGATGAAGAAGCGTTGTTAGTGAGCAGAATAAAGGAAGAAAGAGACGTGGTAGCCGGAGGCTCTTCATCAGTTCAACCGGAGAGAAAGAAACGCGGGAGAAAGAGAAAAGCGGAGAAGGAATCCACCGAAAATGAGGTTCCACAAGTCCACAAGAAACTTAATACCAAATTAAGTTCAGAGGAATCCTTAGCGTGCCATCAATGTAAAAGAAGTGATAAGGGCAGGGTTATAAGATGCACAAAATGCAAACGGAGAAGATATTGCATACCCTGTTTGAACAAATGGTAAGGGGAACCCCCGCAGCTGCTGTTTCACTTTGTTTAACTCGCTTCATATTGTGTTGGCTGGTTCTATTGCAAAGATTACATGTTTCGATTTTGGTTGATGAAATATTGATATTAACTATGTTTTTTTGGTTGTGTCTTGTTAAGGTATCCTAAATTGAATGAGAGCGATGTTGCCGAAGCATGTCCTGTGTGCTGTGATAATTGCAATTGTAAAGCATGCTTGCGATCTTTTAAACTCATCAATGTCGGTGATCGTCTCTTCTAGATTAACTATTTTTTTCATTTTTCTGTATTGTATATTTGAAATGTATCCATCTGGTTTACTATAGGAAATGAAGTATAAGGTCGAAACCAACAATGATGAGGAAGTCGAGTTCTCTAAGTATATGCTGAAGGGACTTCTTCCACATTTAAGACGGTTGGATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAAAATACAAGGTATTCCTTTATTGTCAGCAATAATTTTTAGTTTCATATATTTTTCATTTTATAATTTAATATTCGGATGTGAATTACAGGCCTCTCACTCTCAAAGCTAAATATAAAACCGGCGGATCATTCTAAAGATGAGCGTGTGATCTGGTAAGGACTGATTTGGTATATTAATCAATGTTGTCTTTATTTATTTTGATGCATTATAGTTGTTGATTTCACACTTTTTGTAGTGACAACTGCAAAACATCAATATTTGACTACCACAGAAGCTGTACAAAATGCCGCTTTGACCTTTGTCTCCTCTGTTGTTGCGAGCTCCGTGATGGGAAGATTCTAGGTGGTGCAGATCCAATTGAGCTCGAGTATGTATCACACACTGAGGACGAGTCTACGACTCGTGAGTGGTCAAGATCTGGGTGGCATGCAAATGGCGATGGTAGCATTCCCTGTCCAAAAGCCGATAATGAATGTCATCATGGTTTCCTTGAACTGAGAAGGATACTTCCTCCGAATTGCATCTCCGAGTTAGTATTTAAAGCAAACGAACTTGCAGAAACAATTAAGCTTCAAGATGTAGAGGAGACTTGTGATAATAGGTGTTCTTGCTTGAAACCTGTTAGTAACGCCGATGATATACACAATAACACAGGGAAGGCAGCTTTTCTTGAAAATTCAAGTGACAGATTTTTATACTATCCTAGGGCAGTAGATCTACACCATGGAGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCAAAAGTCATGTGGCGTGCATTCCGTCAAAAAACCAATTCTAAATACGATGAAGTTTTGGATGTGAAGGCTGTTAATTGCATAGATTGGTGTGAGGTTTGTTTGATTTCTAAATCTTTATGATGAAGGGGTTCTAAATGGAATTCATGTTTATTATCTTTGTGTGAAACTTGTTTCTAATTTATTTAACCGGCGTTCTTAAAATTTAGATTGTACCTAACTGAACTCTACAAAACTGCCGTGTGAGCCTCAAGCCAATTTTTTTAGTGTAATTGGCATATGTTGGTCATAATATCGCAGTCGTTTGCGCTTGTCACATATTGTTTTTCAACATTTTCAACAAATGCTACTTCACACTTCTCATTCAATATCTTGTAATCTTATCTTTTAAATTGGTCTAAATTTCTTGATGTCTGGTGTCCCAGTTTGTTTACTTGATAGTCATAATATCCTGATTATTTATCCAAATTTGCCTAACATTCTTGGGCGAATTGTAACTGATTTATGTTACTGAATTTTTTACTGCCTTTACTTGATAGTCTATTCTATGGCTAGTAATTTATTTATTTTAATTTTAGTTGTTCATTGAATGCAGAGAGATATTAATATCCACCAATTCTTCACTGGTTACACAAGGGGTCGCAAGGATTGGCGCAATTGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACGTTTACCTCGTCATCATGCTGACTTCATAACTTCCTTGCCTTATAAAGAATATACAAATCCTTTTAGTGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTTTAAAGCCTGACATGGGGCCAAAAACATATATTGCTTATGGATTTGCTCAGGATCTTGGACACGGGAATTCAGTCACTAAGCTCCATAGTAATGTGTTTGATGCAGTATGCTTCGAAACCTTTTGATTTTCCTGTCATGAGCCTCTTAATTATTTGAGTTTTTTTCTTCTTTTTCTTTCCGAAAGTTTTTGCTGTTATTATGATTCGAGTATCGTATTAAAAAGTGCATAATTTGTACGACATGCACGTTTTTTTTTGTAAGCCAATGCATTTATCTGTTCATTTTCATATGAGCTTATTGTTTTGTAGTTTCAAGTACATGTCATAATTTTTTGTTCATTGCACTGTCATAGATAATTTCATAGTTTGATTTGTGGTGTTTTGGTAATTAATGATTCAAAAAAGTATTCTTTTTCTGACTAGTGACATAAACTGCAAAGTATATTTTGGAATGAATAATGAATGACATATTTCCTGATCAATTCTTTCTAATTTGGCTATAAGGTAAATGTGTTGACGCATATCGCTAAAGTGGAACTGAAACCTAAGGAAATTACTGCCATTAAGAAATTGAGACATAAGCACCTTGAGCAAGATAAGAGGGAGCTACATGGTTATGGGGAGGCGCTTGATATATTTCATCGACACTCTTACACTAATGATAGTGAGCTGCTGGATGGAGGGGATCCCTTAGAAGGTGCTCTTTGGGATATTTTTCGGAGAGAAGATGTACCCAAATTGAAGGAATATCTAAAGAAGCATTTCAGAGAGTTCAGACATGTCAATCGCAGTCCTTTAAAGCAGGTAAAATCAGCTTAGACAATTTTCCATTATCTAGCTCTACGGATGCCCCTCGTGACCATTTACTTTCTCTGCTGCTAACATAATCTATAAATAATAGGTGTTAATTTTCTGAAAATGGAAAGTAAATGATTAATGTCTACTGAAGTGTTTGTATTATCATCATGAATAAGAAGTTTTGTTGATGTAGTTACCAGTCGAAGAGGTCATTGGTTGAATCCACATGTTTATTTGTTTAATATTTTCCTTCTACAACTTTGGTAATGTAGGTTATTGACCCCATTCATGATCAGACCATTTATTTGACTATGGAGCATAAGGTGAAACTCAAGGAGGAGTATGGTTAGTAGTATTTATAAATATTTCTTGGTAGTTTGTTGAGCGGACTGATTTGATCACTCTGTTGACATTTTTTTACATTGACTTGTAGGAGTCGAACCTTGGACTTTTATTCAGAAGCTAGGAGATGCTGTTGTCATTCCCGCTGGTTTGCCTCACCAAGTCAGAAATCTGAAGGTAAAATTTGCATACATGTTACAAGTTTCTGTTTGCCATGAAGAATATAAAGTCTATAAATTTTTTGTTGGAGCGAGGAATAACAGATTAAATTAGATTAAATCTGAATTGAGATCCTTTGTACCCAACAACAAGAGAGTTAAAACACAATAAAAAAGAATTAATATAAGTTTATACGATTTTAATAAAGAAAATGATGGCTTCTAAAATAGAATTTGGATATTTCCTAATTTGTACAGTGTGATGACCTATGATTTCTTGCAAATTGTTGAATCCATACATCACAAACTCACTTTTATTTCAGGATTGCTTTTCTGTTGAAACGATGCTTGAAATGTCTGTGTATATGTAATATATGCATAATTTTTTTTGCAGTCGTGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAACATATTGGTGAGTGCTTTCGTTTGACAGAGGAATTCCGCAAGCTTCCGATAAATCACAGAACTGCCAAGGACAAGTTTGAGGTATTTCATTCTACTTTTATTGATTTGATTCTGCTTTTTCTATTTATAAGGATACTCAATTCATGAAAATAACTAAGTAATATGGAAAGTAATCTTAAGAGATAATCCAAGTAAGAAACTAATCCGATGAGATAAACTAAAATATTCTAACATGATATTAGAATATTAGAAGATTCTTTTCATATATTCTCACATACCGGAGGGCAAGTGAGCAAGCTTGCATATATAACGGCGTTGCTCAGATGGTTCAAACTTTTAATATTGACTGTTTTAATTCAGATAAAATCCTTGTTGAATGTATGAAATCTTGATTGATCATAAACCTATTTCAGTTCTACATTTCAGTGTTATGCCATCATGTCAAGAATTTCTTATTGAGATTTTATGTACTGTTTTTTCCTGATGGCTGCTTCTTGGTACCAGGTGAAGAAAATTGTCATACATGCTATGCTTGATGTGATTGAAAAATTAGAGAAAGAAAGGTTAGTGTGATTGCAAACTTCAGGTCTTTTAGTTATGAAGTTGTATGCTTACATTTCTTTATTATCTTGTTCGATTTTCTGTCAAAGGCATTGATAGATTATATCTTATGTACAATCTTCGAGTATATTGTGAAAATTGATGATTGCCATTAAATTTACAGGTCTGGGAAAACCAAGGTACGTGCGTAA
Protein sequence

>MS.gene38121.t1

MAEEENNEIVTYRVKIKVTLIVPDQEEPIPDDETLPTLNVGAAETASLNNGEASVEAGDVAAAETEESVPDREKQAMNGGPAETASLNNGENLVEAGDVAAAVAEESVPDREKQAMNLGANTVESLLTDDEMAARDSSSVKAAMEIMKRGRKSFAEIQKRKMDEEALLVSRIKEERDVVAGGSSSVQPERKKRGRKRKAEKESTENEVPQVHKKLNTKLSSEESLACHQCKRSDKGRVIRCTKCKRRRYCIPCLNKWYPKLNESDVAEACPEMKYKVETNNDEEVEFSKYMLKGLLPHLRRLDEEQMIEKEREAKIQGLSLSKLNIKPADHSKDERVICDNCKTSIFDYHRSCTKCRFDLCLLCCCELRDGKILGGADPIELEYVSHTEDESTTREWSRSGWHANGDGSIPCPKADNECHHGFLELRRILPPNCISELVFKANELAETIKLQDVEETCDNRCSCLKPVSNADDIHNNTGKAAFLENSSDRFLYYPRAVDLHHGDLRHFQWHWSKGEPVIVSNVLECTSGLSWEPKVMWRAFRQKTNSKYDEVLDVKAVNCIDWCERDINIHQFFTGYTRGRKDWRNWPEVLKLKDWPPSDLFQERLPRHHADFITSLPYKEYTNPFSGSLNLAVKLPDYCLKPDMGPKTYIAYGFAQDLGHGNSVTKLHSNVFDAVNVLTHIAKVELKPKEITAIKKLRHKHLEQDKRELHGYGEALDIFHRHSYTNDSELLDGGDPLEGALWDIFRREDVPKLKEYLKKHFREFRHVNRSPLKQVIDPIHDQTIYLTMEHKVKLKEEYGVEPWTFIQKLGDAVVIPAGLPHQVRNLKSCIKVALDFVSPEHIGECFRLTEEFRKLPINHRTAKDKFEVKKIVIHAMLDVIEKLEKERSGKTKVRA