AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38195

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38195.t1 MTR_5g097490 92.839 391 23 1 1 386 1 391 0.0 727
MS.gene38195.t1 MTR_5g097500 53.628 317 130 4 1 317 1 300 2.78e-109 323
MS.gene38195.t1 MTR_7g071120 46.087 230 120 4 85 310 158 387 1.55e-55 190
MS.gene38195.t1 MTR_3g056100 43.348 233 122 3 84 309 91 320 5.53e-55 187
MS.gene38195.t1 MTR_3g056100 45.455 88 47 1 219 306 71 157 3.96e-15 77.0
MS.gene38195.t1 MTR_3g056100 43.348 233 122 3 84 309 235 464 4.44e-54 188
MS.gene38195.t1 MTR_3g056100 45.455 88 47 1 219 306 215 301 4.26e-15 77.4
MS.gene38195.t1 MTR_3g056100 42.105 247 118 5 84 309 91 333 6.55e-54 185
MS.gene38195.t1 MTR_3g056100 45.455 88 47 1 219 306 71 157 4.33e-15 77.0
MS.gene38195.t1 MTR_5g094430 41.767 249 130 4 91 327 65 310 2.04e-53 182
MS.gene38195.t1 MTR_5g094430 42.105 247 128 4 91 325 87 330 3.39e-53 182
MS.gene38195.t1 MTR_3g056100 42.105 247 118 5 84 309 235 477 4.71e-53 186
MS.gene38195.t1 MTR_3g056100 45.455 88 47 1 219 306 215 301 4.37e-15 77.4
MS.gene38195.t1 MTR_3g031220 41.288 264 128 5 80 323 185 441 1.19e-52 182
MS.gene38195.t1 MTR_5g094430 42.105 247 128 4 91 325 199 442 2.14e-52 183
MS.gene38195.t1 MTR_5g074400 45.000 240 110 6 93 310 244 483 2.81e-52 183
MS.gene38195.t1 MTR_5g074400 46.067 89 47 1 218 306 214 301 8.37e-16 79.3
MS.gene38195.t1 MTR_7g080000 38.542 288 124 7 89 328 231 513 4.08e-50 179
MS.gene38195.t1 MTR_4g013260 40.927 259 131 6 86 329 176 427 2.09e-49 174
MS.gene38195.t1 MTR_5g042920 38.571 280 149 5 52 309 104 382 3.93e-49 172
MS.gene38195.t1 MTR_5g042920 48.485 66 33 1 90 154 318 383 1.77e-11 65.9
MS.gene38195.t1 MTR_7g080020 39.427 279 111 5 89 309 277 555 3.95e-49 177
MS.gene38195.t1 MTR_7g011820 37.716 289 124 6 84 327 220 497 6.03e-48 170
MS.gene38195.t1 MTR_4g082580 40.359 223 109 4 88 309 141 340 4.98e-45 160
MS.gene38195.t1 MTR_4g082580 45.570 79 37 2 82 154 263 341 2.86e-12 67.8
MS.gene38195.t1 MTR_7g100510 38.961 231 124 4 93 306 190 420 2.90e-44 159
MS.gene38195.t1 MTR_7g100510 34.921 126 70 3 248 370 190 306 6.72e-15 76.3
MS.gene38195.t1 MTR_7g100510 40.217 92 49 2 70 155 334 425 1.36e-12 69.3
MS.gene38195.t1 MTR_4g130900 34.818 247 111 6 91 303 185 415 3.05e-35 135
MS.gene38195.t1 MTR_4g130900 45.161 62 33 1 90 150 357 418 2.48e-11 65.5
MS.gene38195.t1 MTR_3g031220 37.981 208 102 5 80 267 185 385 8.56e-30 118
MS.gene38195.t1 MTR_3g031220 41.489 94 52 2 215 308 168 258 4.11e-15 76.6
MS.gene38195.t1 MTR_3g009470 58.000 100 41 1 210 309 459 557 1.43e-29 120
MS.gene38195.t1 MTR_3g009470 61.667 60 23 0 91 150 279 338 8.27e-20 91.7
MS.gene38195.t1 MTR_3g009470 46.465 99 40 4 215 306 246 338 3.46e-14 74.7
MS.gene38195.t1 MTR_3g009470 50.000 64 31 1 90 152 493 556 9.14e-12 67.0
MS.gene38195.t1 MTR_4g021780 53.000 100 46 1 81 180 12 110 3.13e-28 107
MS.gene38195.t1 MTR_1g015140 62.857 70 26 0 234 303 89 158 3.49e-25 100
MS.gene38195.t1 MTR_4g132430 48.980 98 47 3 213 308 94 190 9.04e-24 101
MS.gene38195.t1 MTR_7g110720 50.000 86 41 2 232 315 174 259 2.00e-23 101
MS.gene38195.t1 MTR_7g110720 45.588 68 35 2 90 155 187 254 1.46e-11 65.9
MS.gene38195.t1 MTR_3g104750 60.000 70 28 0 234 303 91 160 2.40e-23 95.9
MS.gene38195.t1 MTR_7g110720 50.000 86 41 2 232 315 201 286 2.83e-23 100
MS.gene38195.t1 MTR_7g110720 45.588 68 35 2 90 155 214 281 1.87e-11 65.5
MS.gene38195.t1 MTR_2g088000 50.000 92 44 2 226 315 328 419 3.06e-23 102
MS.gene38195.t1 MTR_4g132430 50.526 95 40 3 221 308 230 324 6.00e-23 100
MS.gene38195.t1 MTR_3g053330 40.517 116 66 3 202 315 207 321 1.18e-22 99.8
MS.gene38195.t1 MTR_3g053330 47.619 63 31 2 90 150 249 311 7.27e-11 63.9
MS.gene38195.t1 MTR_4g094588 55.056 89 36 2 234 321 165 250 7.59e-22 95.9
MS.gene38195.t1 MTR_4g094588 51.515 66 23 2 92 152 178 239 2.71e-12 67.8
MS.gene38195.t1 MTR_4g094412 52.500 80 37 1 230 308 217 296 8.64e-22 97.1
MS.gene38195.t1 MTR_4g094412 52.500 80 37 1 230 308 226 305 8.95e-22 97.1
MS.gene38195.t1 MTR_7g109800 57.333 75 32 0 232 306 130 204 9.06e-22 94.7
MS.gene38195.t1 MTR_7g109800 50.000 60 29 1 92 150 145 204 6.58e-11 63.2
MS.gene38195.t1 MTR_2g023930 43.000 100 55 2 209 306 267 366 9.70e-22 97.4
MS.gene38195.t1 MTR_8g092010 48.387 93 46 1 216 306 75 167 1.28e-21 91.7
MS.gene38195.t1 MTR_4g049790 46.392 97 45 3 226 315 286 382 1.55e-21 96.7
MS.gene38195.t1 MTR_2g033820 56.579 76 33 0 232 307 188 263 2.33e-21 94.7
MS.gene38195.t1 MTR_2g033820 50.820 61 29 1 93 152 204 264 6.20e-12 67.0
MS.gene38195.t1 MTR_5g091390 58.108 74 31 0 234 307 144 217 5.69e-21 92.8
MS.gene38195.t1 MTR_8g007270 52.703 74 35 0 232 305 139 212 6.50e-21 90.9
MS.gene38195.t1 MTR_8g007270 49.254 67 32 2 90 154 152 218 3.30e-11 63.2
MS.gene38195.t1 MTR_3g095080 51.351 74 36 0 232 305 129 202 1.93e-20 89.4
MS.gene38195.t1 MTR_3g095080 51.351 74 36 0 232 305 153 226 2.18e-20 89.7
MS.gene38195.t1 MTR_1g013790 39.062 128 57 5 234 340 86 213 2.75e-20 89.7
MS.gene38195.t1 MTR_8g096730 39.175 97 57 1 207 303 32 126 4.10e-20 86.3
MS.gene38195.t1 MTR_8g096730 45.946 74 37 2 90 162 68 139 2.35e-13 67.4
MS.gene38195.t1 MTR_3g009470 61.667 60 23 0 91 150 279 338 6.74e-20 91.7
MS.gene38195.t1 MTR_3g009470 46.465 99 40 4 215 306 246 338 3.29e-14 74.3
MS.gene38195.t1 MTR_3g009470 60.345 58 22 1 210 267 459 515 1.92e-11 65.9
MS.gene38195.t1 MTR_7g028415 55.224 67 30 0 237 303 83 149 7.46e-20 86.3
MS.gene38195.t1 MTR_7g028415 48.333 60 30 1 90 148 91 150 2.93e-12 65.1
MS.gene38195.t1 MTR_7g028710 55.224 67 30 0 237 303 83 149 7.46e-20 86.3
MS.gene38195.t1 MTR_7g028710 48.333 60 30 1 90 148 91 150 2.93e-12 65.1
MS.gene38195.t1 MTR_1g077780 47.368 76 40 0 232 307 47 122 7.48e-20 85.5
MS.gene38195.t1 MTR_3g106060 52.703 74 32 3 233 303 122 195 8.66e-20 89.0
MS.gene38195.t1 MTR_7g079010 54.286 70 32 0 234 303 128 197 1.25e-19 87.0
MS.gene38195.t1 MTR_7g079010 51.667 60 28 1 90 148 139 198 2.30e-13 69.3
MS.gene38195.t1 MTR_2g045360 41.593 113 60 3 218 328 182 290 1.40e-19 90.1
MS.gene38195.t1 MTR_4g049760 45.055 91 49 1 218 307 261 351 1.45e-19 90.9
MS.gene38195.t1 MTR_5g043880 58.571 70 29 0 234 303 111 180 1.83e-19 87.8
MS.gene38195.t1 MTR_5g043880 54.386 57 25 1 92 147 124 180 1.80e-11 64.7
MS.gene38195.t1 MTR_1g086790 49.438 89 38 1 232 313 143 231 2.02e-19 88.6
MS.gene38195.t1 MTR_1g086790 40.659 91 49 2 92 177 158 248 1.69e-12 68.2
MS.gene38195.t1 MTR_6g086555 38.095 126 77 1 182 306 141 266 2.45e-19 89.4
MS.gene38195.t1 MTR_3g095040 51.351 74 36 0 234 307 105 178 2.47e-19 85.9
MS.gene38195.t1 MTR_3g095040 42.667 75 42 1 89 162 115 189 2.28e-11 63.2
MS.gene38195.t1 MTR_4g122530 49.333 75 38 0 233 307 194 268 2.90e-19 89.4
MS.gene38195.t1 MTR_4g107970 50.000 76 37 1 232 306 163 238 3.20e-19 89.7
MS.gene38195.t1 MTR_4g107970 50.000 76 37 1 232 306 240 315 3.44e-19 89.7
MS.gene38195.t1 MTR_1g013760 53.425 73 31 2 234 303 125 197 4.08e-19 87.0
MS.gene38195.t1 MTR_7g009730 52.113 71 33 1 234 303 206 276 1.11e-18 88.2
MS.gene38195.t1 MTR_7g062220 57.377 61 26 0 244 304 121 181 1.53e-18 85.9
MS.gene38195.t1 MTR_8g092140 50.667 75 36 1 232 305 144 218 1.68e-18 84.3
MS.gene38195.t1 MTR_4g007060 51.948 77 34 3 233 306 112 188 4.10e-18 84.0
MS.gene38195.t1 MTR_4g007060 44.444 63 33 2 90 150 126 188 3.89e-11 63.5
MS.gene38195.t1 MTR_1g078260 40.000 95 56 1 212 305 212 306 6.42e-18 85.5
MS.gene38195.t1 MTR_4g007060 51.948 77 34 3 233 306 146 222 6.64e-18 84.0
MS.gene38195.t1 MTR_4g007060 44.444 63 33 2 90 150 160 222 5.69e-11 63.5
MS.gene38195.t1 MTR_2g105060 50.000 78 36 2 233 307 78 155 2.39e-17 81.3
MS.gene38195.t1 MTR_2g105060 50.000 78 36 2 233 307 153 230 3.52e-17 82.0
MS.gene38195.t1 MTR_4g094908 54.386 57 25 1 248 303 267 323 3.62e-16 79.3
MS.gene38195.t1 MTR_1g009613 49.296 71 35 1 234 303 249 319 5.67e-16 78.6
MS.gene38195.t1 MTR_5g016610 47.887 71 36 1 234 303 186 256 9.69e-16 77.0
MS.gene38195.t1 MTR_1g070455 55.172 58 25 1 248 304 294 351 4.12e-15 76.3
MS.gene38195.t1 MTR_4g127040 46.479 71 37 1 234 303 232 302 7.52e-15 75.1
MS.gene38195.t1 MTR_7g109600 38.261 115 58 4 195 308 13 115 9.79e-15 73.9
MS.gene38195.t1 MTR_8g087000 50.000 64 31 1 247 309 77 140 2.06e-14 72.8
MS.gene38195.t1 MTR_8g087000 50.000 64 31 1 247 309 76 139 2.21e-14 72.8
MS.gene38195.t1 MTR_4g047580 41.667 84 48 1 226 308 260 343 3.62e-14 74.3
MS.gene38195.t1 MTR_8g098945 45.833 72 38 1 239 309 121 192 9.47e-14 71.2
MS.gene38195.t1 MTR_2g083870 45.122 82 38 2 226 306 65 140 9.97e-14 70.9
MS.gene38195.t1 MTR_5g044695 53.448 58 22 1 221 273 46 103 1.16e-13 67.0
MS.gene38195.t1 MTR_2g024350 51.471 68 31 2 88 153 4 71 1.26e-13 70.1
MS.gene38195.t1 MTR_2g024350 49.180 61 30 1 248 307 9 69 2.37e-13 69.3
MS.gene38195.t1 MTR_1g099600 41.772 79 44 2 232 309 171 248 1.87e-13 70.9
MS.gene38195.t1 MTR_8g067650 46.377 69 33 3 88 153 335 402 2.95e-13 71.6
MS.gene38195.t1 MTR_8g067650 42.500 80 45 1 230 308 322 401 2.50e-12 68.6
MS.gene38195.t1 MTR_8g067635 48.529 68 31 3 89 153 346 412 3.63e-13 71.2
MS.gene38195.t1 MTR_8g067635 42.500 80 45 1 230 308 332 411 4.15e-12 67.8
MS.gene38195.t1 MTR_2g016770 50.820 61 28 2 248 306 36 96 3.88e-13 68.6
MS.gene38195.t1 MTR_5g074200 30.519 154 86 2 1 154 150 282 4.81e-13 69.7
MS.gene38195.t1 MTR_5g074200 39.130 92 48 4 217 306 193 278 9.64e-12 65.9
MS.gene38195.t1 MTR_2g016770 50.820 61 28 2 248 306 28 88 5.19e-13 68.2
MS.gene38195.t1 MTR_2g024380 49.180 61 30 1 248 307 252 312 6.90e-13 70.1
MS.gene38195.t1 MTR_2g024380 49.275 69 31 3 88 153 247 314 2.54e-12 68.6
MS.gene38195.t1 MTR_8g028565 46.970 66 34 1 245 309 153 218 8.38e-13 69.3
MS.gene38195.t1 MTR_4g007060 51.471 68 30 3 233 297 146 213 1.16e-12 67.4
MS.gene38195.t1 MTR_0117s0040 34.615 130 57 5 178 303 26 131 1.83e-12 67.0
MS.gene38195.t1 MTR_6g038890 50.820 61 29 1 213 273 155 214 3.27e-12 65.9
MS.gene38195.t1 MTR_7g079040 46.875 64 33 1 245 307 152 215 3.67e-12 67.4
MS.gene38195.t1 MTR_3g108960 43.836 73 40 1 232 303 299 371 5.55e-12 67.0
MS.gene38195.t1 MTR_2g032030 47.619 63 32 1 248 309 268 330 7.53e-12 67.0
MS.gene38195.t1 MTR_2g032030 49.231 65 31 2 88 150 263 327 8.66e-11 63.5
MS.gene38195.t1 MTR_2g032030 47.619 63 32 1 248 309 268 330 8.51e-12 67.0
MS.gene38195.t1 MTR_8g027860 38.554 83 47 2 240 319 129 210 1.48e-11 65.5
MS.gene38195.t1 MTR_8g069935 44.928 69 34 2 248 315 332 397 4.29e-11 64.7
MS.gene38195.t1 MTR_3g090860 45.902 61 30 1 244 301 130 190 6.52e-11 63.5
MS.gene38195.t1 MTR_5g067680 47.368 57 27 1 248 301 203 259 7.16e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38195.t1 AT2G04880 45.113 266 110 7 76 314 94 350 2.80e-66 218
MS.gene38195.t1 AT2G04880 44.128 281 115 7 76 314 94 374 2.74e-65 216
MS.gene38195.t1 AT4G26640 43.426 251 105 7 83 309 30 267 9.84e-52 177
MS.gene38195.t1 AT4G26640 43.426 251 105 7 83 309 30 267 9.84e-52 177
MS.gene38195.t1 AT4G26640 43.426 251 105 7 83 309 30 267 9.84e-52 177
MS.gene38195.t1 AT4G26640 43.426 251 105 7 83 309 30 267 9.84e-52 177
MS.gene38195.t1 AT2G38470 42.742 248 107 5 92 310 184 425 4.28e-51 179
MS.gene38195.t1 AT2G38470 53.226 62 28 1 90 150 360 421 4.43e-12 67.8
MS.gene38195.t1 AT4G26640 43.426 251 105 7 83 309 134 371 6.99e-51 177
MS.gene38195.t1 AT4G26640 43.426 251 105 7 83 309 166 403 1.12e-50 177
MS.gene38195.t1 AT4G26640 43.426 251 105 7 83 309 206 443 1.75e-50 178
MS.gene38195.t1 AT2G30250 42.616 237 124 6 83 309 157 391 1.12e-49 172
MS.gene38195.t1 AT4G26440 38.132 257 118 3 93 309 179 434 1.90e-47 170
MS.gene38195.t1 AT4G26440 50.820 61 29 1 246 306 177 236 6.16e-13 70.5
MS.gene38195.t1 AT1G13960 40.249 241 119 5 88 303 72 312 2.37e-47 165
MS.gene38195.t1 AT5G07100 40.249 241 103 4 74 312 5 206 2.86e-47 160
MS.gene38195.t1 AT5G07100 40.249 241 103 4 74 312 5 206 2.86e-47 160
MS.gene38195.t1 AT5G07100 40.249 241 103 4 74 312 5 206 2.86e-47 160
MS.gene38195.t1 AT5G07100 40.249 241 103 4 74 312 5 206 2.86e-47 160
MS.gene38195.t1 AT5G07100 40.249 241 103 4 74 312 98 299 5.30e-47 163
MS.gene38195.t1 AT1G13960 40.249 241 119 5 88 303 225 465 3.11e-46 166
MS.gene38195.t1 AT4G30935 36.120 299 165 9 33 307 95 391 1.09e-45 163
MS.gene38195.t1 AT3G01080 40.741 216 112 3 88 303 163 362 2.76e-45 161
MS.gene38195.t1 AT3G01080 56.250 64 27 1 246 309 166 228 9.77e-15 75.9
MS.gene38195.t1 AT3G01080 50.000 62 30 1 90 150 304 365 8.46e-11 63.5
MS.gene38195.t1 AT3G01080 40.741 216 112 3 88 303 201 400 3.98e-45 162
MS.gene38195.t1 AT3G01080 56.250 64 27 1 246 309 204 266 1.32e-14 75.5
MS.gene38195.t1 AT3G01080 50.000 62 30 1 90 150 342 403 8.07e-11 63.9
MS.gene38195.t1 AT2G03340 34.231 260 105 4 88 309 246 477 3.56e-41 152
MS.gene38195.t1 AT2G03340 56.923 65 27 1 246 310 249 312 8.05e-17 82.4
MS.gene38195.t1 AT2G03340 50.794 63 30 1 93 154 416 478 5.90e-12 67.4
MS.gene38195.t1 AT2G37260 35.821 268 117 7 93 316 86 342 1.48e-40 147
MS.gene38195.t1 AT2G37260 35.821 268 117 7 93 316 84 340 1.57e-40 147
MS.gene38195.t1 AT2G37260 35.821 268 117 7 93 316 166 422 3.57e-40 147
MS.gene38195.t1 AT5G56270 56.000 100 44 0 210 309 450 549 1.99e-30 123
MS.gene38195.t1 AT5G56270 55.932 59 25 1 248 306 274 331 5.61e-15 77.0
MS.gene38195.t1 AT5G56270 53.968 63 29 0 91 153 272 334 9.45e-15 76.3
MS.gene38195.t1 AT5G56270 50.000 64 31 1 90 152 485 548 2.73e-11 65.9
MS.gene38195.t1 AT4G12020 33.010 206 104 3 88 267 464 661 6.89e-24 104
MS.gene38195.t1 AT4G12020 50.820 61 29 1 246 306 467 526 1.42e-12 70.1
MS.gene38195.t1 AT4G12020 33.010 206 104 3 88 267 464 661 6.89e-24 104
MS.gene38195.t1 AT4G12020 50.820 61 29 1 246 306 467 526 1.42e-12 70.1
MS.gene38195.t1 AT4G12020 33.010 206 104 3 88 267 464 661 6.94e-24 104
MS.gene38195.t1 AT4G12020 50.820 61 29 1 246 306 467 526 1.48e-12 70.1
MS.gene38195.t1 AT4G12020 33.010 206 104 3 88 267 464 661 7.01e-24 104
MS.gene38195.t1 AT4G12020 50.820 61 29 1 246 306 467 526 1.50e-12 70.1
MS.gene38195.t1 AT4G12020 33.010 206 104 3 88 267 464 661 7.41e-24 104
MS.gene38195.t1 AT4G12020 50.820 61 29 1 246 306 467 526 1.53e-12 70.1
MS.gene38195.t1 AT4G12020 33.010 206 104 3 88 267 464 661 7.74e-24 104
MS.gene38195.t1 AT4G12020 50.820 61 29 1 246 306 467 526 1.50e-12 70.1
MS.gene38195.t1 AT4G12020 33.010 206 104 3 88 267 464 661 7.74e-24 104
MS.gene38195.t1 AT4G12020 50.820 61 29 1 246 306 467 526 1.50e-12 70.1
MS.gene38195.t1 AT4G12020 33.010 206 104 3 88 267 464 661 7.98e-24 104
MS.gene38195.t1 AT4G12020 50.820 61 29 1 246 306 467 526 1.65e-12 69.7
MS.gene38195.t1 AT4G12020 33.010 206 104 3 88 267 464 661 8.52e-24 104
MS.gene38195.t1 AT4G12020 50.820 61 29 1 246 306 467 526 1.70e-12 69.7
MS.gene38195.t1 AT4G12020 33.010 206 104 3 88 267 397 594 9.71e-24 103
MS.gene38195.t1 AT4G12020 50.820 61 29 1 246 306 400 459 1.61e-12 69.7
MS.gene38195.t1 AT4G12020 33.010 206 104 3 88 267 464 661 1.04e-23 103
MS.gene38195.t1 AT4G12020 50.820 61 29 1 246 306 467 526 1.75e-12 69.7
MS.gene38195.t1 AT5G26170 57.143 70 30 0 234 303 100 169 2.46e-23 95.9
MS.gene38195.t1 AT4G04450 48.387 93 46 2 225 315 176 268 4.06e-23 100
MS.gene38195.t1 AT4G04450 47.619 63 31 2 90 150 196 258 2.09e-11 65.5
MS.gene38195.t1 AT4G22070 49.425 87 42 2 222 306 272 358 9.48e-23 100
MS.gene38195.t1 AT4G22070 47.619 63 31 2 90 150 295 357 4.40e-11 64.7
MS.gene38195.t1 AT4G22070 49.425 87 42 2 222 306 272 358 9.48e-23 100
MS.gene38195.t1 AT4G22070 47.619 63 31 2 90 150 295 357 4.40e-11 64.7
MS.gene38195.t1 AT4G22070 49.425 87 42 2 222 306 272 358 9.48e-23 100
MS.gene38195.t1 AT4G22070 47.619 63 31 2 90 150 295 357 4.40e-11 64.7
MS.gene38195.t1 AT4G22070 49.425 87 42 2 222 306 272 358 9.48e-23 100
MS.gene38195.t1 AT4G22070 47.619 63 31 2 90 150 295 357 4.40e-11 64.7
MS.gene38195.t1 AT4G04450 48.387 93 46 2 225 315 270 362 1.04e-22 100
MS.gene38195.t1 AT4G04450 47.619 63 31 2 90 150 290 352 3.97e-11 65.1
MS.gene38195.t1 AT5G64810 57.143 70 30 0 234 303 97 166 1.43e-22 94.7
MS.gene38195.t1 AT2G47260 57.333 75 32 0 232 306 159 233 1.78e-22 97.4
MS.gene38195.t1 AT1G68150 52.500 80 37 1 230 308 218 297 2.86e-22 97.4
MS.gene38195.t1 AT1G55600 50.575 87 42 1 222 307 282 368 3.66e-22 98.2
MS.gene38195.t1 AT1G55600 43.421 76 34 2 76 150 299 366 6.34e-11 64.3
MS.gene38195.t1 AT1G62300 47.059 102 49 3 210 306 272 373 6.57e-22 97.8
MS.gene38195.t1 AT1G62300 47.619 63 31 2 90 150 310 372 5.50e-11 64.7
MS.gene38195.t1 AT2G44745 52.703 74 35 0 232 305 130 203 1.38e-21 92.4
MS.gene38195.t1 AT2G44745 46.479 71 37 1 90 159 143 213 9.66e-12 64.7
MS.gene38195.t1 AT4G01720 55.844 77 32 2 232 306 224 300 1.96e-21 96.3
MS.gene38195.t1 AT4G18170 58.750 80 32 1 232 310 157 236 2.05e-21 94.4
MS.gene38195.t1 AT4G18170 51.667 60 28 1 92 150 172 231 3.43e-11 64.3
MS.gene38195.t1 AT1G29860 56.250 80 34 1 232 310 121 200 2.68e-21 93.2
MS.gene38195.t1 AT1G29860 48.387 62 31 1 92 152 136 197 8.31e-11 62.8
MS.gene38195.t1 AT2G46130 55.714 70 31 0 234 303 17 86 5.16e-21 87.8
MS.gene38195.t1 AT2G46130 43.750 80 43 2 90 167 28 107 7.87e-14 67.8
MS.gene38195.t1 AT5G49520 55.000 80 35 1 232 310 206 285 9.09e-21 93.6
MS.gene38195.t1 AT5G49520 50.847 59 28 1 93 150 222 280 4.64e-11 64.3
MS.gene38195.t1 AT5G13080 42.105 95 55 0 209 303 29 123 1.13e-20 87.8
MS.gene38195.t1 AT5G13080 48.438 64 32 1 90 152 65 128 1.15e-12 65.5
MS.gene38195.t1 AT4G39410 54.054 74 34 0 232 305 208 281 2.23e-20 90.9
MS.gene38195.t1 AT5G46350 56.579 76 33 0 234 309 170 245 2.73e-20 91.3
MS.gene38195.t1 AT5G41570 51.429 70 34 0 234 303 85 154 4.42e-20 87.4
MS.gene38195.t1 AT5G41570 43.333 90 43 3 90 177 96 179 9.74e-14 69.3
MS.gene38195.t1 AT1G64000 51.429 70 34 0 234 303 101 170 5.22e-20 87.4
MS.gene38195.t1 AT1G64000 43.902 82 44 2 88 167 110 191 3.20e-14 71.2
MS.gene38195.t1 AT5G15130 52.000 75 35 1 233 306 213 287 7.56e-20 91.7
MS.gene38195.t1 AT5G15130 52.000 75 35 1 233 306 171 245 8.11e-20 91.3
MS.gene38195.t1 AT3G62340 44.737 114 56 2 234 342 105 216 3.40e-19 87.0
MS.gene38195.t1 AT3G62340 52.542 59 27 1 93 150 119 177 1.61e-11 64.7
MS.gene38195.t1 AT1G69310 57.143 70 30 0 234 303 134 203 3.73e-19 87.4
MS.gene38195.t1 AT1G69310 52.632 57 26 1 92 147 147 203 6.51e-11 63.2
MS.gene38195.t1 AT1G69310 57.143 70 30 0 234 303 134 203 3.73e-19 87.4
MS.gene38195.t1 AT1G69310 52.632 57 26 1 92 147 147 203 6.51e-11 63.2
MS.gene38195.t1 AT1G69310 57.143 70 30 0 234 303 134 203 3.73e-19 87.4
MS.gene38195.t1 AT1G69310 52.632 57 26 1 92 147 147 203 6.51e-11 63.2
MS.gene38195.t1 AT3G01970 50.704 71 35 0 233 303 51 121 4.93e-19 83.6
MS.gene38195.t1 AT4G31800 49.275 69 34 1 239 306 103 171 2.10e-18 84.3
MS.gene38195.t1 AT1G18860 50.000 76 37 1 232 306 224 299 2.26e-18 87.0
MS.gene38195.t1 AT4G31800 49.275 69 34 1 239 306 168 236 2.85e-18 85.1
MS.gene38195.t1 AT5G43290 33.582 134 79 1 243 376 110 233 1.95e-17 82.0
MS.gene38195.t1 AT2G25000 52.308 65 30 1 243 306 99 163 1.99e-17 81.3
MS.gene38195.t1 AT2G25000 52.308 65 30 1 243 306 99 163 1.99e-17 81.3
MS.gene38195.t1 AT2G25000 52.308 65 30 1 243 306 121 185 3.82e-17 80.9
MS.gene38195.t1 AT2G25000 52.308 65 30 1 243 306 142 206 4.11e-17 81.3
MS.gene38195.t1 AT2G21900 48.485 66 34 0 242 307 104 169 5.00e-17 79.3
MS.gene38195.t1 AT2G21900 41.250 80 46 1 72 150 89 168 7.14e-13 67.4
MS.gene38195.t1 AT1G69810 50.649 77 36 2 232 306 130 206 6.19e-17 81.6
MS.gene38195.t1 AT2G23320 41.121 107 45 3 215 303 191 297 6.23e-17 81.3
MS.gene38195.t1 AT1G69810 50.649 77 36 2 232 306 188 264 8.44e-17 81.6
MS.gene38195.t1 AT5G28650 57.895 57 23 1 248 303 263 319 2.32e-16 79.7
MS.gene38195.t1 AT1G80840 43.590 78 41 2 233 307 130 207 2.69e-16 79.3
MS.gene38195.t1 AT3G01080 51.562 64 31 0 88 151 201 264 2.72e-16 79.7
MS.gene38195.t1 AT3G01080 56.250 64 27 1 246 309 204 266 5.21e-15 75.9
MS.gene38195.t1 AT2G46130 51.429 70 30 1 234 303 17 82 2.84e-16 74.3
MS.gene38195.t1 AT2G24570 56.140 57 24 1 248 303 244 300 6.41e-16 78.6
MS.gene38195.t1 AT3G04670 57.895 57 23 1 248 303 263 319 7.26e-16 78.2
MS.gene38195.t1 AT4G24240 47.222 72 37 1 234 304 268 339 1.08e-15 78.2
MS.gene38195.t1 AT4G31550 54.386 57 25 1 248 303 247 303 4.79e-15 75.9
MS.gene38195.t1 AT4G31550 54.386 57 25 1 248 303 246 302 5.11e-15 75.9
MS.gene38195.t1 AT5G52830 46.914 81 41 2 230 309 149 228 5.95e-15 75.9
MS.gene38195.t1 AT5G52830 45.588 68 35 2 85 150 158 225 1.01e-11 66.2
MS.gene38195.t1 AT2G30590 54.386 57 25 1 248 303 314 370 1.63e-14 74.7
MS.gene38195.t1 AT1G69310 52.857 70 29 1 234 303 134 199 1.75e-14 73.6
MS.gene38195.t1 AT4G23550 44.000 75 41 1 236 309 129 203 4.24e-14 72.8
MS.gene38195.t1 AT1G29280 50.820 61 29 1 247 306 74 134 5.05e-14 72.0
MS.gene38195.t1 AT3G58710 40.566 106 56 2 203 307 32 131 3.94e-13 69.3
MS.gene38195.t1 AT3G58710 44.578 83 39 2 226 307 56 132 1.40e-12 67.8
MS.gene38195.t1 AT5G01900 38.889 90 51 2 90 175 108 197 1.68e-12 67.4
MS.gene38195.t1 AT4G01250 46.875 64 33 1 247 309 128 191 6.46e-12 66.2
MS.gene38195.t1 AT2G34830 47.619 63 32 1 248 309 216 278 6.79e-12 67.0
MS.gene38195.t1 AT2G34830 47.619 63 32 1 248 309 225 287 6.96e-12 67.0
MS.gene38195.t1 AT1G30650 47.619 63 32 1 248 309 218 280 1.26e-11 66.2
MS.gene38195.t1 AT1G30650 50.769 65 30 2 88 150 213 277 4.64e-11 64.3
MS.gene38195.t1 AT5G45260 48.387 62 28 2 93 150 1209 1270 1.43e-11 67.0
MS.gene38195.t1 AT2G46400 42.254 71 38 1 234 301 91 161 4.64e-11 63.5

Find 76 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGTACGGTGTTTGATTC+AGG 0.253166 5.3:+78810466 None:intergenic
TTAAGGGGAGTGAATTTAAA+AGG 0.256917 5.3:-78810600 MS.gene38195:CDS
CACTTGCTGCTGTACTTTAT+CGG 0.275757 5.3:+78810873 None:intergenic
TACGGTCAGAAAATGGTTAA+AGG 0.320262 5.3:-78809978 MS.gene38195:CDS
ACGGTGTTTGATTCAGGTTT+GGG 0.332610 5.3:+78810472 None:intergenic
TACGGTGTTTGATTCAGGTT+TGG 0.335607 5.3:+78810471 None:intergenic
AAAACATTGCAATTCAGCTT+TGG 0.349332 5.3:+78809445 None:intergenic
GGCTATAAATGGCGAAAGTA+TGG 0.352648 5.3:-78810634 MS.gene38195:CDS
AAACATTGCAATTCAGCTTT+GGG 0.362250 5.3:+78809446 None:intergenic
TCACAAAAGATGGCTATAAA+TGG 0.370905 5.3:-78810645 MS.gene38195:CDS
GCGCAAATACGGTCAGAAAA+TGG 0.379435 5.3:-78809985 MS.gene38195:CDS
ATCGCTGATAGAATCTTCTT+TGG 0.384153 5.3:+78809554 None:intergenic
CAATTCATGCGAAGGAGTCT+TGG 0.392943 5.3:+78810717 None:intergenic
AATTCATGCGAAGGAGTCTT+GGG 0.399844 5.3:+78810718 None:intergenic
ATAGAATCTTCTTTGGTACT+AGG 0.419154 5.3:+78809561 None:intergenic
GGAAGGATGGTCGCTCGAAT+TGG 0.420254 5.3:+78809636 None:intergenic
AACTGTCATAACTACCTATG+AGG 0.422219 5.3:-78809724 MS.gene38195:CDS
ACCTTCCACATCAGCAAAAG+AGG 0.424951 5.3:+78810399 None:intergenic
GTTCTTCCTGTTGTCGAAAA+GGG 0.426795 5.3:-78810433 MS.gene38195:CDS
TGTTCTTCCTGTTGTCGAAA+AGG 0.433937 5.3:-78810434 MS.gene38195:CDS
CAAACTTGAATCACGTATCA+TGG 0.436403 5.3:+78809530 None:intergenic
TACTATCGATGCTCGAGTCC+CGG 0.444280 5.3:-78809792 MS.gene38195:CDS
GGGGCTCTGTGAATGTTGCT+CGG 0.456403 5.3:+78810738 None:intergenic
CGTGAAAAGGTCACAAAAGA+TGG 0.457293 5.3:-78810655 MS.gene38195:CDS
ACCCTCCATAATACGTGAAA+AGG 0.461224 5.3:-78810668 MS.gene38195:CDS
GTTCGAACTACAAGTGAGTC+TGG 0.468907 5.3:-78810032 MS.gene38195:CDS
GAATTGCCTCTGATGCAATC+TGG 0.477337 5.3:-78810700 MS.gene38195:CDS
GGGTATCGCTGGCGCAAATA+CGG 0.478104 5.3:-78809996 MS.gene38195:CDS
TGATGCTATGGCTTGTGACT+TGG 0.484944 5.3:-78810782 MS.gene38195:CDS
CTCTGTGAATGTTGCTCGGG+TGG 0.485622 5.3:+78810742 None:intergenic
AACACGATCAACCGGTGGTA+CGG 0.488236 5.3:+78810453 None:intergenic
ATGATCATGTTGACCCTCAT+AGG 0.497230 5.3:+78809710 None:intergenic
ACAGGAAGAACACGATCAAC+CGG 0.499247 5.3:+78810445 None:intergenic
AAGACCCTGGTTAGGAAGGA+TGG 0.500400 5.3:+78809623 None:intergenic
GGGCTCTGTGAATGTTGCTC+GGG 0.501211 5.3:+78810739 None:intergenic
CATGTACCTCCCGCTGGAAG+AGG 0.501900 5.3:-78809690 MS.gene38195:CDS
TCTGCAACAGATGGTGTACT+AGG 0.504253 5.3:+78809474 None:intergenic
TCTTGACCAGATTGCATCAG+AGG 0.508109 5.3:+78810694 None:intergenic
AATAGTAACAACGATGCGAC+TGG 0.513117 5.3:-78810089 MS.gene38195:CDS
GTATGAAGCTGTGCCTCGAC+AGG 0.524519 5.3:-78810272 MS.gene38195:CDS
TTTGCTGATGTGGAAGGTCA+AGG 0.525864 5.3:-78810394 MS.gene38195:intron
AGCGACCATCCTTCCTAACC+AGG 0.527054 5.3:-78809628 MS.gene38195:CDS
CCACATCAGCAAAAGAGGAT+TGG 0.536681 5.3:+78810404 None:intergenic
TGGGCGGGTTCTGCAACAGA+TGG 0.545042 5.3:+78809465 None:intergenic
TTGTAAATGATGGGTATCGC+TGG 0.545679 5.3:-78810007 MS.gene38195:CDS
ATTGCAATTCAGCTTTGGGC+GGG 0.555048 5.3:+78809450 None:intergenic
CGCAAAGGTGTGACCTGTCG+AGG 0.560873 5.3:+78810259 None:intergenic
AGGGAGATTGCATTGTCACA+AGG 0.566691 5.3:-78810841 MS.gene38195:CDS
GAGTCTGGAATTGTAAATGA+TGG 0.567590 5.3:-78810017 MS.gene38195:CDS
TCAGGGACACCTCTTCCAGC+GGG 0.571731 5.3:+78809681 None:intergenic
TGAATCAAACACCGTACCAC+CGG 0.573093 5.3:-78810464 MS.gene38195:CDS
CATGATCATGTACCTCCCGC+TGG 0.575201 5.3:-78809696 MS.gene38195:CDS
TCATGTTCACTTAATCTGCA+TGG 0.576789 5.3:+78809501 None:intergenic
CATTGCAATTCAGCTTTGGG+CGG 0.578039 5.3:+78809449 None:intergenic
TCTTAAAAGTGAAATAAATG+AGG 0.591759 5.3:-78809604 MS.gene38195:CDS
CGGTGTTTGATTCAGGTTTG+GGG 0.596338 5.3:+78810473 None:intergenic
ATCAGAGGCAATTCATGCGA+AGG 0.602766 5.3:+78810709 None:intergenic
ACTGGAGCTGATGTGTCAAA+TGG 0.603473 5.3:-78810071 MS.gene38195:CDS
ACTGTCATAACTACCTATGA+GGG 0.609013 5.3:-78809723 MS.gene38195:CDS
AGTGTCGGATTCTGATGCTA+TGG 0.614930 5.3:-78810794 MS.gene38195:CDS
GGGAGATTGCATTGTCACAA+GGG 0.616469 5.3:-78810840 MS.gene38195:CDS
TTCAGGGACACCTCTTCCAG+CGG 0.624834 5.3:+78809680 None:intergenic
TACGAAGATTGCAGTTACAT+CGG 0.625017 5.3:-78810508 MS.gene38195:CDS
GAAGGTGGATGGAAACGCAA+AGG 0.633047 5.3:+78810244 None:intergenic
AGTCTGGAATTGTAAATGAT+GGG 0.636147 5.3:-78810016 MS.gene38195:CDS
GCAGCAAGTGAGTCCACAGA+GGG 0.639573 5.3:-78810860 MS.gene38195:CDS
CGCGAACTGACGAGTCAAAG+CGG 0.647499 5.3:-78810213 MS.gene38195:CDS
GACAATGCAATCTCCCTCTG+TGG 0.657768 5.3:+78810847 None:intergenic
TTAAAGGCAACACAAATCCA+AGG 0.658587 5.3:-78809962 MS.gene38195:intron
GGGACACCTCTTCCAGCGGG+AGG 0.678592 5.3:+78809684 None:intergenic
AGCAGCAAGTGAGTCCACAG+AGG 0.681184 5.3:-78810861 MS.gene38195:CDS
ATTCATGCGAAGGAGTCTTG+GGG 0.682503 5.3:+78810719 None:intergenic
GCGACCATCCTTCCTAACCA+GGG 0.690672 5.3:-78809627 MS.gene38195:CDS
TCAGCAAAAGAGGATTGGTG+TGG 0.698509 5.3:+78810409 None:intergenic
GGAAGAACACGATCAACCGG+TGG 0.725841 5.3:+78810448 None:intergenic
CAATTTCAGATATCACACGA+TGG 0.729225 5.3:-78810535 MS.gene38195:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTAATATATTTTACTGTA+TGG - chr5.3:78810051-78810070 MS.gene38195:CDS 15.0%
!! TCTTAAAAGTGAAATAAATG+AGG - chr5.3:78810767-78810786 MS.gene38195:CDS 20.0%
! ACAAAATAATGCATCTTGAA+AGG + chr5.3:78810479-78810498 None:intergenic 25.0%
! TTTACAATGTGATATCAAAC+AGG - chr5.3:78810250-78810269 MS.gene38195:CDS 25.0%
!! AATTTTGTAGGTGTATTTTC+AGG + chr5.3:78810711-78810730 None:intergenic 25.0%
!! ATTTTGTAGGTGTATTTTCA+GGG + chr5.3:78810710-78810729 None:intergenic 25.0%
!! GCTTTTATTATGAATTGGTA+TGG - chr5.3:78810441-78810460 MS.gene38195:CDS 25.0%
!!! ATTAAGAGTTTTTTCATGCA+AGG + chr5.3:78810038-78810057 None:intergenic 25.0%
!!! CACTAGCTTTTATTATGAAT+TGG - chr5.3:78810436-78810455 MS.gene38195:CDS 25.0%
ATAGAATCTTCTTTGGTACT+AGG + chr5.3:78810813-78810832 None:intergenic 30.0%
TCACAAAAGATGGCTATAAA+TGG - chr5.3:78809726-78809745 MS.gene38195:CDS 30.0%
TGTAGCTAAAAATGAAGTGT+CGG - chr5.3:78809562-78809581 MS.gene38195:CDS 30.0%
TTAAGGGGAGTGAATTTAAA+AGG - chr5.3:78809771-78809790 MS.gene38195:CDS 30.0%
! ACTCCAACAATTCTAGAAAA+TGG + chr5.3:78810199-78810218 None:intergenic 30.0%
! AGTCTGGAATTGTAAATGAT+GGG - chr5.3:78810355-78810374 MS.gene38195:intron 30.0%
! GATAGTAATTTCTGGAAGAT+TGG + chr5.3:78810566-78810585 None:intergenic 30.0%
!! ATCTGAAATTGTTTTCTTGC+AGG + chr5.3:78809827-78809846 None:intergenic 30.0%
!! TCTGAAATTGTTTTCTTGCA+GGG + chr5.3:78809826-78809845 None:intergenic 30.0%
!!! TGACCATTTTCTAGAATTGT+TGG - chr5.3:78810193-78810212 MS.gene38195:intron 30.0%
!!! TTATTTCACTTTTAAGACCC+TGG + chr5.3:78810764-78810783 None:intergenic 30.0%
AACTGTCATAACTACCTATG+AGG - chr5.3:78810647-78810666 MS.gene38195:CDS 35.0%
ACTGTCATAACTACCTATGA+GGG - chr5.3:78810648-78810667 MS.gene38195:CDS 35.0%
ATAAAAGCTAGTGTGTACCT+TGG + chr5.3:78810429-78810448 None:intergenic 35.0%
ATCGCTGATAGAATCTTCTT+TGG + chr5.3:78810820-78810839 None:intergenic 35.0%
CAAACTTGAATCACGTATCA+TGG + chr5.3:78810844-78810863 None:intergenic 35.0%
CAATTTCAGATATCACACGA+TGG - chr5.3:78809836-78809855 MS.gene38195:intron 35.0%
TACGAAGATTGCAGTTACAT+CGG - chr5.3:78809863-78809882 MS.gene38195:intron 35.0%
TACGGTCAGAAAATGGTTAA+AGG - chr5.3:78810393-78810412 MS.gene38195:intron 35.0%
TATGGCCAGAAAAACGTTAA+GGG - chr5.3:78809755-78809774 MS.gene38195:CDS 35.0%
TCATGTTCACTTAATCTGCA+TGG + chr5.3:78810873-78810892 None:intergenic 35.0%
TTAAAGGCAACACAAATCCA+AGG - chr5.3:78810409-78810428 MS.gene38195:CDS 35.0%
! ACCTTTTCACGTATTATGGA+GGG + chr5.3:78809707-78809726 None:intergenic 35.0%
! CGAATTGGAGTCAATTTTGT+AGG + chr5.3:78810723-78810742 None:intergenic 35.0%
! GAGTCTGGAATTGTAAATGA+TGG - chr5.3:78810354-78810373 MS.gene38195:intron 35.0%
! TCAGTTCGCGAAATTTTTGA+AGG + chr5.3:78810148-78810167 None:intergenic 35.0%
! TGTGACCTTTTCACGTATTA+TGG + chr5.3:78809711-78809730 None:intergenic 35.0%
!! CTTCTCAACATGCTTTTTGA+CGG + chr5.3:78810610-78810629 None:intergenic 35.0%
!! TTCTCAACATGCTTTTTGAC+GGG + chr5.3:78810609-78810628 None:intergenic 35.0%
AATAGTAACAACGATGCGAC+TGG - chr5.3:78810282-78810301 MS.gene38195:CDS 40.0%
AATTCATGCGAAGGAGTCTT+GGG + chr5.3:78809656-78809675 None:intergenic 40.0%
ACCCTCCATAATACGTGAAA+AGG - chr5.3:78809703-78809722 MS.gene38195:CDS 40.0%
ATGATCATGTTGACCCTCAT+AGG + chr5.3:78810664-78810683 None:intergenic 40.0%
ATGGCCAGAAAAACGTTAAG+GGG - chr5.3:78809756-78809775 MS.gene38195:CDS 40.0%
CGTGAAAAGGTCACAAAAGA+TGG - chr5.3:78809716-78809735 MS.gene38195:CDS 40.0%
GGCTATAAATGGCGAAAGTA+TGG - chr5.3:78809737-78809756 MS.gene38195:CDS 40.0%
GTATGGCCAGAAAAACGTTA+AGG - chr5.3:78809754-78809773 MS.gene38195:CDS 40.0%
GTTCTTCCTGTTGTCGAAAA+GGG - chr5.3:78809938-78809957 MS.gene38195:intron 40.0%
TGAATTGGTATGGTACATCG+TGG - chr5.3:78810451-78810470 MS.gene38195:CDS 40.0%
TGTTCTTCCTGTTGTCGAAA+AGG - chr5.3:78809937-78809956 MS.gene38195:intron 40.0%
! ACGGTGTTTGATTCAGGTTT+GGG + chr5.3:78809902-78809921 None:intergenic 40.0%
! CACTTGCTGCTGTACTTTAT+CGG + chr5.3:78809501-78809520 None:intergenic 40.0%
! GACCTTTTCACGTATTATGG+AGG + chr5.3:78809708-78809727 None:intergenic 40.0%
! TACGGTGTTTGATTCAGGTT+TGG + chr5.3:78809903-78809922 None:intergenic 40.0%
!! CGAGCATCGATAGTAATTTC+TGG + chr5.3:78810574-78810593 None:intergenic 40.0%
!! GACAGTTGTTGTGTTTTGAG+AGG + chr5.3:78810634-78810653 None:intergenic 40.0%
!! GCGAAATTTTTGAAGGTGGA+TGG + chr5.3:78810141-78810160 None:intergenic 40.0%
!! GTTCGCGAAATTTTTGAAGG+TGG + chr5.3:78810145-78810164 None:intergenic 40.0%
!! TCTCAACATGCTTTTTGACG+GGG + chr5.3:78810608-78810627 None:intergenic 40.0%
!! TTGTAAATGATGGGTATCGC+TGG - chr5.3:78810364-78810383 MS.gene38195:intron 40.0%
!!! TCACTTTTAAGACCCTGGTT+AGG + chr5.3:78810759-78810778 None:intergenic 40.0%
!!! TTTTAAGACCCTGGTTAGGA+AGG + chr5.3:78810755-78810774 None:intergenic 40.0%
ACAGGAAGAACACGATCAAC+CGG + chr5.3:78809929-78809948 None:intergenic 45.0%
ACCTTCCACATCAGCAAAAG+AGG + chr5.3:78809975-78809994 None:intergenic 45.0%
ACTGGAGCTGATGTGTCAAA+TGG - chr5.3:78810300-78810319 MS.gene38195:intron 45.0%
AGGGAGATTGCATTGTCACA+AGG - chr5.3:78809530-78809549 MS.gene38195:CDS 45.0%
ATCAGAGGCAATTCATGCGA+AGG + chr5.3:78809665-78809684 None:intergenic 45.0%
ATTCATGCGAAGGAGTCTTG+GGG + chr5.3:78809655-78809674 None:intergenic 45.0%
CAATTCATGCGAAGGAGTCT+TGG + chr5.3:78809657-78809676 None:intergenic 45.0%
CCACATCAGCAAAAGAGGAT+TGG + chr5.3:78809970-78809989 None:intergenic 45.0%
GAATTGCCTCTGATGCAATC+TGG - chr5.3:78809671-78809690 MS.gene38195:CDS 45.0%
GCGCAAATACGGTCAGAAAA+TGG - chr5.3:78810386-78810405 MS.gene38195:intron 45.0%
GGGAGATTGCATTGTCACAA+GGG - chr5.3:78809531-78809550 MS.gene38195:CDS 45.0%
GTTCGAACTACAAGTGAGTC+TGG - chr5.3:78810339-78810358 MS.gene38195:intron 45.0%
TCTGCAACAGATGGTGTACT+AGG + chr5.3:78810900-78810919 None:intergenic 45.0%
TCTTGACCAGATTGCATCAG+AGG + chr5.3:78809680-78809699 None:intergenic 45.0%
TGAATCAAACACCGTACCAC+CGG - chr5.3:78809907-78809926 MS.gene38195:intron 45.0%
TTTGCTGATGTGGAAGGTCA+AGG - chr5.3:78809977-78809996 MS.gene38195:CDS 45.0%
! AGTGTCGGATTCTGATGCTA+TGG - chr5.3:78809577-78809596 MS.gene38195:CDS 45.0%
! CACTCCCCTTAACGTTTTTC+TGG + chr5.3:78809763-78809782 None:intergenic 45.0%
! CCAATCCTCTTTTGCTGATG+TGG - chr5.3:78809967-78809986 MS.gene38195:CDS 45.0%
! CGGTGTTTGATTCAGGTTTG+GGG + chr5.3:78809901-78809920 None:intergenic 45.0%
! TCAGCAAAAGAGGATTGGTG+TGG + chr5.3:78809965-78809984 None:intergenic 45.0%
! TCCTCTTTTGCTGATGTGGA+AGG - chr5.3:78809971-78809990 MS.gene38195:CDS 45.0%
! TGATGCTATGGCTTGTGACT+TGG - chr5.3:78809589-78809608 MS.gene38195:CDS 45.0%
AACACGATCAACCGGTGGTA+CGG + chr5.3:78809921-78809940 None:intergenic 50.0%
AAGACCCTGGTTAGGAAGGA+TGG + chr5.3:78810751-78810770 None:intergenic 50.0%
GAAGGTGGATGGAAACGCAA+AGG + chr5.3:78810130-78810149 None:intergenic 50.0%
GACAATGCAATCTCCCTCTG+TGG + chr5.3:78809527-78809546 None:intergenic 50.0%
GGTGGTACGGTGTTTGATTC+AGG + chr5.3:78809908-78809927 None:intergenic 50.0%
TACTATCGATGCTCGAGTCC+CGG - chr5.3:78810579-78810598 MS.gene38195:CDS 50.0%
! TGTGGTCCCTTTTCGACAAC+AGG + chr5.3:78809947-78809966 None:intergenic 50.0%
!! ATGCTTTTTGACGGGGCATC+CGG + chr5.3:78810601-78810620 None:intergenic 50.0%
AGCAGCAAGTGAGTCCACAG+AGG - chr5.3:78809510-78809529 MS.gene38195:CDS 55.0%
AGCGACCATCCTTCCTAACC+AGG - chr5.3:78810743-78810762 MS.gene38195:CDS 55.0%
CATGATCATGTACCTCCCGC+TGG - chr5.3:78810675-78810694 MS.gene38195:CDS 55.0%
CGCGAACTGACGAGTCAAAG+CGG - chr5.3:78810158-78810177 MS.gene38195:intron 55.0%
CTCTGTGAATGTTGCTCGGG+TGG + chr5.3:78809632-78809651 None:intergenic 55.0%
GCAGCAAGTGAGTCCACAGA+GGG - chr5.3:78809511-78809530 MS.gene38195:CDS 55.0%
GCGACCATCCTTCCTAACCA+GGG - chr5.3:78810744-78810763 MS.gene38195:CDS 55.0%
GGAAGAACACGATCAACCGG+TGG + chr5.3:78809926-78809945 None:intergenic 55.0%
GGAAGGATGGTCGCTCGAAT+TGG + chr5.3:78810738-78810757 None:intergenic 55.0%
GGGCTCTGTGAATGTTGCTC+GGG + chr5.3:78809635-78809654 None:intergenic 55.0%
GGGGCTCTGTGAATGTTGCT+CGG + chr5.3:78809636-78809655 None:intergenic 55.0%
GTATGAAGCTGTGCCTCGAC+AGG - chr5.3:78810099-78810118 MS.gene38195:CDS 55.0%
TTCAGGGACACCTCTTCCAG+CGG + chr5.3:78810694-78810713 None:intergenic 55.0%
! GGGTATCGCTGGCGCAAATA+CGG - chr5.3:78810375-78810394 MS.gene38195:intron 55.0%
!! TGCTTTTTGACGGGGCATCC+GGG + chr5.3:78810600-78810619 None:intergenic 55.0%
CATGTACCTCCCGCTGGAAG+AGG - chr5.3:78810681-78810700 MS.gene38195:CDS 60.0%
TCAGGGACACCTCTTCCAGC+GGG + chr5.3:78810693-78810712 None:intergenic 60.0%
! CGCAAAGGTGTGACCTGTCG+AGG + chr5.3:78810115-78810134 None:intergenic 60.0%
! TGGGCGGGTTCTGCAACAGA+TGG + chr5.3:78810909-78810928 None:intergenic 60.0%
GGGACACCTCTTCCAGCGGG+AGG + chr5.3:78810690-78810709 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 78809458 78810935 78809458 ID=MS.gene38195
chr5.3 mRNA 78809458 78810935 78809458 ID=MS.gene38195.t1;Parent=MS.gene38195
chr5.3 exon 78810395 78810935 78810395 ID=MS.gene38195.t1.exon1;Parent=MS.gene38195.t1
chr5.3 CDS 78810395 78810935 78810395 ID=cds.MS.gene38195.t1;Parent=MS.gene38195.t1
chr5.3 exon 78810211 78810310 78810211 ID=MS.gene38195.t1.exon2;Parent=MS.gene38195.t1
chr5.3 CDS 78810211 78810310 78810211 ID=cds.MS.gene38195.t1;Parent=MS.gene38195.t1
chr5.3 exon 78809963 78810121 78809963 ID=MS.gene38195.t1.exon3;Parent=MS.gene38195.t1
chr5.3 CDS 78809963 78810121 78809963 ID=cds.MS.gene38195.t1;Parent=MS.gene38195.t1
chr5.3 exon 78809458 78809818 78809458 ID=MS.gene38195.t1.exon4;Parent=MS.gene38195.t1
chr5.3 CDS 78809458 78809818 78809458 ID=cds.MS.gene38195.t1;Parent=MS.gene38195.t1
Gene Sequence

>MS.gene38195

ATGGTTTTGTCACAAGAAAGTGCTGATCACAACGTTTCTTCCGATAAAGTACAGCAGCAAGTGAGTCCACAGAGGGAGATTGCATTGTCACAAGGGATTGATGATGTAGCTAAAAATGAAGTGTCGGATTCTGATGCTATGGCTTGTGACTTGGTATCGTCACACTCTTCACCACCCGAGCAACATTCACAGAGCCCCAAGACTCCTTCGCATGAATTGCCTCTGATGCAATCTGGTCAAGACAAACCCTCCATAATACGTGAAAAGGTCACAAAAGATGGCTATAAATGGCGAAAGTATGGCCAGAAAAACGTTAAGGGGAGTGAATTTAAAAGGAGTTATTACAAATGTACTTATTCAGACTGCCCTGCAAGAAAACAATTTCAGATATCACACGATGGAAACTACGAAGATTGCAGTTACATCGGTCAGCATAATCACCCCAAACCTGAATCAAACACCGTACCACCGGTTGATCGTGTTCTTCCTGTTGTCGAAAAGGGACCACACCAATCCTCTTTTGCTGATGTGGAAGGTCAAGGTGAGAAGTAAACTTTGTTAGTATTTTTGTTTTCGTCCTTGCATGAAAAAACTCTTAATATATTTTACTGTATGGTGCATGCAGAAAATTCATCTGTTGAGTATGAAGCTGTGCCTCGACAGGTCACACCTTTGCGTTTCCATCCACCTTCAAAAATTTCGCGAACTGACGAGTCAAAGCGGCTGTACGTTATTTGACCATTTTCTAGAATTGTTGGAGTTGATATATGCGATATCTAACATTTAATTTACTTTACAATGTGATATCAAACAGGAAGAAAGACAATAGTAACAACGATGCGACTGGAGCTGATGTGTCAAATGGTGAATCTCGCGTTATTGTTCGAACTACAAGTGAGTCTGGAATTGTAAATGATGGGTATCGCTGGCGCAAATACGGTCAGAAAATGGTTAAAGGCAACACAAATCCAAGGTACACACTAGCTTTTATTATGAATTGGTATGGTACATCGTGGATCCTTTCAAGATGCATTATTTTGTCTCTCATTCTCTATGTGCTCGCAAATTCATGAAACGATTTAATCTAATTGATTGCACGTTCTCTCCAATCTTCCAGAAATTACTATCGATGCTCGAGTCCCGGATGCCCCGTCAAAAAGCATGTTGAGAAGTCCTCTCAAAACACAACAACTGTCATAACTACCTATGAGGGTCAACATGATCATGTACCTCCCGCTGGAAGAGGTGTCCCTGAAAATACACCTACAAAATTGACTCCAATTCGAGCGACCATCCTTCCTAACCAGGGTCTTAAAAGTGAAATAAATGAGGAAGAGCAACAAAATGAAGATCCTAGTACCAAAGAAGATTCTATCAGCGATGCCATGATACGTGATTCAAGTTTGAAAGTTCCATGCAGATTAAGTGAACATGATACTCCTAGTACACCATCTGTTGCAGAACCCGCCCAAAGCTGA
Protein sequence

>MS.gene38195.t1

MVLSQESADHNVSSDKVQQQVSPQREIALSQGIDDVAKNEVSDSDAMACDLVSSHSSPPEQHSQSPKTPSHELPLMQSGQDKPSIIREKVTKDGYKWRKYGQKNVKGSEFKRSYYKCTYSDCPARKQFQISHDGNYEDCSYIGQHNHPKPESNTVPPVDRVLPVVEKGPHQSSFADVEGQENSSVEYEAVPRQVTPLRFHPPSKISRTDESKRLKKDNSNNDATGADVSNGESRVIVRTTSESGIVNDGYRWRKYGQKMVKGNTNPRNYYRCSSPGCPVKKHVEKSSQNTTTVITTYEGQHDHVPPAGRGVPENTPTKLTPIRATILPNQGLKSEINEEEQQNEDPSTKEDSISDAMIRDSSLKVPCRLSEHDTPSTPSVAEPAQS