Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38387.t1 | XP_013460465.1 | 96.3 | 748 | 27 | 1 | 1 | 747 | 164 | 911 | 0.00E+00 | 1413.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38387.t1 | Q8W4L5 | 53.1 | 620 | 232 | 12 | 59 | 673 | 182 | 747 | 9.7e-154 | 545.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38387.t1 | A0A072UZF3 | 96.3 | 748 | 27 | 1 | 1 | 747 | 164 | 911 | 0.0e+00 | 1413.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene38387.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38387.t1 | MTR_3g467380 | 96.257 | 748 | 27 | 1 | 1 | 747 | 164 | 911 | 0.0 | 1479 |
| MS.gene38387.t1 | MTR_4g028130 | 51.004 | 747 | 339 | 10 | 15 | 745 | 162 | 897 | 0.0 | 700 |
| MS.gene38387.t1 | MTR_4g028130 | 49.933 | 751 | 305 | 13 | 15 | 745 | 162 | 861 | 0.0 | 672 |
| MS.gene38387.t1 | MTR_5g075410 | 55.639 | 665 | 245 | 10 | 9 | 669 | 160 | 778 | 0.0 | 662 |
| MS.gene38387.t1 | MTR_4g028130 | 56.379 | 486 | 200 | 5 | 15 | 498 | 162 | 637 | 1.04e-177 | 523 |
| MS.gene38387.t1 | MTR_2g011940 | 47.218 | 629 | 264 | 12 | 60 | 665 | 225 | 808 | 8.95e-170 | 511 |
| MS.gene38387.t1 | MTR_2g011940 | 47.748 | 444 | 186 | 6 | 60 | 497 | 234 | 637 | 6.02e-123 | 382 |
| MS.gene38387.t1 | MTR_2g011940 | 48.198 | 444 | 184 | 8 | 60 | 497 | 234 | 637 | 9.42e-123 | 382 |
| MS.gene38387.t1 | MTR_7g073240 | 40.920 | 435 | 176 | 11 | 55 | 485 | 2 | 359 | 2.94e-94 | 298 |
| MS.gene38387.t1 | MTR_7g083700 | 40.777 | 103 | 60 | 1 | 175 | 276 | 126 | 228 | 1.50e-18 | 87.8 |
| MS.gene38387.t1 | MTR_7g059330 | 37.255 | 102 | 62 | 2 | 175 | 274 | 623 | 724 | 5.07e-16 | 82.8 |
| MS.gene38387.t1 | MTR_1g058350 | 36.364 | 165 | 80 | 9 | 156 | 306 | 54 | 207 | 5.83e-14 | 73.9 |
| MS.gene38387.t1 | MTR_7g117455 | 40.659 | 91 | 49 | 3 | 175 | 262 | 117 | 205 | 4.20e-13 | 72.8 |
| MS.gene38387.t1 | MTR_5g053920 | 38.000 | 100 | 49 | 3 | 174 | 262 | 193 | 290 | 7.56e-13 | 71.2 |
| MS.gene38387.t1 | MTR_8g023990 | 38.462 | 91 | 51 | 3 | 175 | 262 | 171 | 259 | 2.17e-12 | 70.5 |
| MS.gene38387.t1 | MTR_7g105370 | 35.338 | 133 | 79 | 5 | 180 | 308 | 65 | 194 | 5.09e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38387.t1 | AT2G30470 | 54.032 | 620 | 226 | 14 | 59 | 673 | 182 | 747 | 0.0 | 583 |
| MS.gene38387.t1 | AT4G32010 | 53.621 | 580 | 216 | 13 | 24 | 598 | 137 | 668 | 0.0 | 573 |
| MS.gene38387.t1 | AT4G32010 | 53.253 | 584 | 216 | 14 | 24 | 598 | 137 | 672 | 0.0 | 569 |
| MS.gene38387.t1 | AT4G21550 | 39.796 | 294 | 119 | 7 | 144 | 434 | 294 | 532 | 8.72e-55 | 198 |
| MS.gene38387.t1 | AT4G21550 | 39.051 | 274 | 110 | 6 | 144 | 415 | 294 | 512 | 5.91e-50 | 184 |
| MS.gene38387.t1 | AT4G21550 | 39.934 | 303 | 125 | 8 | 144 | 444 | 294 | 541 | 8.27e-50 | 187 |
| MS.gene38387.t1 | AT4G21550 | 45.455 | 99 | 51 | 2 | 546 | 641 | 550 | 648 | 7.69e-12 | 69.3 |
| MS.gene38387.t1 | AT3G26790 | 42.308 | 104 | 59 | 1 | 175 | 277 | 91 | 194 | 3.03e-20 | 92.8 |
| MS.gene38387.t1 | AT3G24650 | 39.216 | 102 | 60 | 2 | 175 | 274 | 571 | 672 | 2.87e-16 | 83.6 |
| MS.gene38387.t1 | AT1G13260 | 38.739 | 111 | 61 | 4 | 174 | 279 | 186 | 294 | 1.02e-14 | 76.6 |
| MS.gene38387.t1 | AT1G28300 | 43.023 | 86 | 48 | 1 | 175 | 259 | 170 | 255 | 1.85e-14 | 76.3 |
| MS.gene38387.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 175 | 275 | 37 | 142 | 2.03e-14 | 72.4 |
| MS.gene38387.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 175 | 275 | 37 | 142 | 2.03e-14 | 72.4 |
| MS.gene38387.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 175 | 275 | 37 | 142 | 4.55e-14 | 73.2 |
| MS.gene38387.t1 | AT4G01500 | 41.573 | 89 | 49 | 2 | 175 | 262 | 35 | 121 | 1.04e-13 | 73.6 |
| MS.gene38387.t1 | AT1G68840 | 41.935 | 93 | 47 | 3 | 175 | 262 | 187 | 277 | 1.18e-13 | 73.6 |
| MS.gene38387.t1 | AT1G68840 | 41.935 | 93 | 47 | 3 | 175 | 262 | 187 | 277 | 1.18e-13 | 73.6 |
| MS.gene38387.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 175 | 275 | 37 | 142 | 5.28e-13 | 69.7 |
| MS.gene38387.t1 | AT5G06250 | 31.707 | 164 | 89 | 6 | 164 | 309 | 37 | 195 | 7.51e-13 | 70.1 |
| MS.gene38387.t1 | AT5G06250 | 31.707 | 164 | 89 | 6 | 164 | 309 | 37 | 195 | 7.53e-13 | 70.1 |
| MS.gene38387.t1 | AT5G06250 | 31.707 | 164 | 89 | 6 | 164 | 309 | 37 | 195 | 8.03e-13 | 69.7 |
| MS.gene38387.t1 | AT3G61970 | 39.362 | 94 | 49 | 3 | 175 | 262 | 22 | 113 | 8.39e-13 | 70.5 |
| MS.gene38387.t1 | AT5G06250 | 33.557 | 149 | 76 | 6 | 164 | 294 | 37 | 180 | 8.80e-13 | 69.7 |
| MS.gene38387.t1 | AT5G06250 | 33.557 | 149 | 76 | 6 | 164 | 294 | 37 | 180 | 9.85e-13 | 69.7 |
| MS.gene38387.t1 | AT2G46870 | 39.560 | 91 | 50 | 3 | 175 | 262 | 34 | 122 | 1.03e-12 | 70.1 |
| MS.gene38387.t1 | AT1G01030 | 39.560 | 91 | 50 | 3 | 175 | 262 | 55 | 143 | 4.23e-12 | 68.6 |
| MS.gene38387.t1 | AT1G01030 | 39.560 | 91 | 50 | 3 | 175 | 262 | 55 | 143 | 4.60e-12 | 68.9 |
| MS.gene38387.t1 | AT1G25560 | 34.167 | 120 | 65 | 4 | 175 | 282 | 194 | 311 | 5.13e-12 | 68.6 |
| MS.gene38387.t1 | AT3G11580 | 38.235 | 102 | 47 | 3 | 175 | 262 | 28 | 127 | 1.46e-11 | 65.5 |
| MS.gene38387.t1 | AT3G11580 | 38.235 | 102 | 47 | 3 | 175 | 262 | 28 | 127 | 1.46e-11 | 65.5 |
| MS.gene38387.t1 | AT3G11580 | 38.235 | 102 | 47 | 3 | 175 | 262 | 28 | 127 | 1.46e-11 | 65.5 |
| MS.gene38387.t1 | AT3G11580 | 36.752 | 117 | 55 | 5 | 175 | 275 | 28 | 141 | 1.76e-11 | 65.9 |
Find 203 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTCTTGGACCGCCATTT+TGG | 0.208895 | 3.4:+64297325 | None:intergenic |
| CAAACCTCAGCACAAGCTTT+TGG | 0.244863 | 3.4:+64300358 | None:intergenic |
| CAAAACTTAGTGATCATATA+TGG | 0.245085 | 3.4:-64297365 | MS.gene38387:CDS |
| AAAAGTAAGAGATTGCTTAT+TGG | 0.247967 | 3.4:-64299290 | MS.gene38387:CDS |
| ATGAATATAGAAACTGAAAA+AGG | 0.252818 | 3.4:-64301074 | MS.gene38387:CDS |
| AACAACATGATTACATCTAA+TGG | 0.257026 | 3.4:-64301416 | MS.gene38387:CDS |
| GAACCTTCACATTTGGTTAC+TGG | 0.267943 | 3.4:-64299419 | MS.gene38387:CDS |
| ATTTCAGTATTAACTGTTCT+TGG | 0.275052 | 3.4:+64297312 | None:intergenic |
| ATCAGTTACTTCCTAGATAT+TGG | 0.275669 | 3.4:-64300998 | MS.gene38387:CDS |
| GATGTAATCATGTTGTTTAT+CGG | 0.277647 | 3.4:+64301422 | None:intergenic |
| GCAGGAAGTTCAACATTCTT+TGG | 0.282712 | 3.4:-64297289 | MS.gene38387:CDS |
| CTCTGAAGGTCTTCCTTTGC+GGG | 0.296256 | 3.4:-64300152 | MS.gene38387:CDS |
| TACATCCTGCTGTTGTTATT+AGG | 0.296564 | 3.4:+64300082 | None:intergenic |
| GGTTTGCTTAAAGCCGAAAA+TGG | 0.307447 | 3.4:-64299389 | MS.gene38387:CDS |
| CAGAAGGACCATACCTTTGC+TGG | 0.313097 | 3.4:+64298098 | None:intergenic |
| ATCCAAGACCATGAGCCTTC+TGG | 0.325362 | 3.4:-64297837 | MS.gene38387:CDS |
| TAGATATTGGCCTAGGATTA+CGG | 0.327990 | 3.4:-64300985 | MS.gene38387:CDS |
| AAGAAGTTAGGCCTTCATTC+AGG | 0.328809 | 3.4:-64301382 | MS.gene38387:CDS |
| TATTGGTAATGATGATTCTA+TGG | 0.330411 | 3.4:-64299273 | MS.gene38387:CDS |
| TTCTCCTAAAACAGCTAAAC+TGG | 0.334808 | 3.4:+64297800 | None:intergenic |
| CATATTAATATGAACCAAAA+TGG | 0.335008 | 3.4:-64297339 | MS.gene38387:CDS |
| TCATTCAGGGAAGGGGATAC+TGG | 0.337204 | 3.4:-64301368 | MS.gene38387:CDS |
| GCCGTCTTTGAATATGTGTT+TGG | 0.340861 | 3.4:-64301240 | MS.gene38387:CDS |
| CTCTAAATGGAGAAAGTTAC+CGG | 0.350506 | 3.4:-64298346 | MS.gene38387:CDS |
| ATATTCAGCGCCTCTTCATC+TGG | 0.353236 | 3.4:-64298962 | MS.gene38387:CDS |
| AAGGCCGGTCTTTAACAGTT+TGG | 0.353568 | 3.4:+64301100 | None:intergenic |
| GTTTCTTCTTGCGTAGCATA+AGG | 0.356903 | 3.4:+64297610 | None:intergenic |
| ATTCATTACCCTTCACATCT+TGG | 0.362672 | 3.4:+64300128 | None:intergenic |
| AGCCAGAAGGCTCATGGTCT+TGG | 0.374011 | 3.4:+64297835 | None:intergenic |
| AATGTGATGATTGCTCTAAA+TGG | 0.377625 | 3.4:-64298359 | MS.gene38387:CDS |
| AAGAAGAGGACTCGAAATAT+TGG | 0.381088 | 3.4:-64299317 | MS.gene38387:CDS |
| AGGCCGGTCTTTAACAGTTT+GGG | 0.381417 | 3.4:+64301101 | None:intergenic |
| TCCGTTCACCAAATGGTAAC+GGG | 0.384737 | 3.4:-64299466 | MS.gene38387:CDS |
| GGACATGTTCGGAAAATGTC+TGG | 0.386985 | 3.4:-64298299 | MS.gene38387:CDS |
| ACATCCTGAACCTTCACATT+TGG | 0.390011 | 3.4:-64299426 | MS.gene38387:CDS |
| CGAAGTTCCCCGTTACCATT+TGG | 0.395408 | 3.4:+64299458 | None:intergenic |
| CCGTCTTTGAATATGTGTTT+GGG | 0.395837 | 3.4:-64301239 | MS.gene38387:CDS |
| ACAACATGATTACATCTAAT+GGG | 0.396289 | 3.4:-64301415 | MS.gene38387:CDS |
| TCTACATCTGCACATTCTAA+TGG | 0.401601 | 3.4:-64299563 | MS.gene38387:CDS |
| AAGAGAAGTTGCGAATCCTT+TGG | 0.405293 | 3.4:-64297499 | MS.gene38387:CDS |
| GATTTACGTGCTGGTGATAC+TGG | 0.406488 | 3.4:-64300022 | MS.gene38387:intron |
| ACTCTGAAGGTCTTCCTTTG+CGG | 0.407452 | 3.4:-64300153 | MS.gene38387:CDS |
| CAGGAGCTGGAGCGTTTGTC+GGG | 0.412381 | 3.4:-64300960 | MS.gene38387:CDS |
| TCTTTGGCCACTCAATCTAA+TGG | 0.413775 | 3.4:-64297273 | MS.gene38387:CDS |
| TTTAACAGTTTGGGAAGTAT+AGG | 0.414755 | 3.4:+64301110 | None:intergenic |
| TCCCTTGAACTCAGCTCGTC+TGG | 0.417698 | 3.4:+64298141 | None:intergenic |
| CCACGTATTGCTCGGCCTCC+TGG | 0.420064 | 3.4:-64301038 | MS.gene38387:CDS |
| GACAATGCTTGGCTTGACAC+TGG | 0.420212 | 3.4:+64299202 | None:intergenic |
| AACGGGGAACTTCGCTCAAA+TGG | 0.422522 | 3.4:-64299449 | MS.gene38387:CDS |
| TCCTCGATTGTGACAATGCT+TGG | 0.426368 | 3.4:+64299191 | None:intergenic |
| ATGTGTTTGGGAAACCCGTC+AGG | 0.426949 | 3.4:-64301227 | MS.gene38387:CDS |
| GTAACCAAATGTGAAGGTTC+AGG | 0.430266 | 3.4:+64299422 | None:intergenic |
| CACCAGACGAGCTGAGTTCA+AGG | 0.433052 | 3.4:-64298143 | MS.gene38387:CDS |
| ATTGCTCGGCCTCCTGGTGA+TGG | 0.435069 | 3.4:-64301032 | MS.gene38387:CDS |
| CATTTGGTTACTGGAGCTGC+TGG | 0.436882 | 3.4:-64299410 | MS.gene38387:CDS |
| ACATTTAGTCGGATAGATCC+TGG | 0.438208 | 3.4:-64299755 | MS.gene38387:CDS |
| TCCTCCCAAGTGGACATGTT+CGG | 0.442585 | 3.4:-64298310 | MS.gene38387:CDS |
| TCGGCCTCCTGGTGATGGGA+GGG | 0.451096 | 3.4:-64301027 | MS.gene38387:CDS |
| ACCAATCCGACCTGCATCAC+TGG | 0.451773 | 3.4:+64300393 | None:intergenic |
| GGGTGTGACCCCTTGTATAC+AGG | 0.451818 | 3.4:-64300050 | MS.gene38387:CDS |
| ATTCTCATTTCCACCAGAAA+AGG | 0.451824 | 3.4:+64299520 | None:intergenic |
| AACAACTCTTTCCCACCATC+TGG | 0.452851 | 3.4:-64301203 | MS.gene38387:CDS |
| CCAGGAGCTGGAGCGTTTGT+CGG | 0.452967 | 3.4:-64300961 | MS.gene38387:CDS |
| TTTCTTCTTGCGTAGCATAA+GGG | 0.453058 | 3.4:+64297611 | None:intergenic |
| GGACCTGCTGATTCCTCAGC+CGG | 0.453893 | 3.4:-64297768 | MS.gene38387:CDS |
| CGGCCTCCTGGTGATGGGAG+GGG | 0.454483 | 3.4:-64301026 | MS.gene38387:CDS |
| GCAAAAGTTAATGACTGAAC+AGG | 0.455178 | 3.4:+64301323 | None:intergenic |
| CACTTGCAAGTCATCGCGAT+TGG | 0.460509 | 3.4:+64297398 | None:intergenic |
| AAATCCATGGCCTGTATACA+AGG | 0.462450 | 3.4:+64300040 | None:intergenic |
| TTCTATATTCATGGTAAGGC+CGG | 0.462900 | 3.4:+64301085 | None:intergenic |
| CCGACAAACGCTCCAGCTCC+TGG | 0.468848 | 3.4:+64300961 | None:intergenic |
| CAGTTTCTATATTCATGGTA+AGG | 0.468963 | 3.4:+64301081 | None:intergenic |
| AACAGTTAATACTGAAATGC+AGG | 0.469413 | 3.4:-64297307 | MS.gene38387:CDS |
| CTCGGCCTCCTGGTGATGGG+AGG | 0.470919 | 3.4:-64301028 | MS.gene38387:CDS |
| TAGGATTACGGACCAGGAGC+TGG | 0.472738 | 3.4:-64300973 | MS.gene38387:CDS |
| GAGCAGCCGGGACGGTGTCT+AGG | 0.474417 | 3.4:+64297729 | None:intergenic |
| GGAAAATCAATCAAGAAGTT+AGG | 0.478147 | 3.4:-64301394 | MS.gene38387:CDS |
| GGAAAGAGTTGTTCCCTGAC+GGG | 0.480170 | 3.4:+64301213 | None:intergenic |
| TAGATCTATCTTTCCAGCGC+TGG | 0.481295 | 3.4:+64297431 | None:intergenic |
| GATCTTCTCCGTTCACCAAA+TGG | 0.483108 | 3.4:-64299473 | MS.gene38387:CDS |
| CTATGGAGTTGAGACTTACA+TGG | 0.484609 | 3.4:-64299256 | MS.gene38387:CDS |
| CCTTCAGAGTGTGTAATATG+AGG | 0.486209 | 3.4:+64300166 | None:intergenic |
| CTTGGCTTGACACTGGGCGG+TGG | 0.487076 | 3.4:+64299209 | None:intergenic |
| CCCCGTTACCATTTGGTGAA+CGG | 0.487521 | 3.4:+64299465 | None:intergenic |
| CAACAGCAGGATGTACGTAT+TGG | 0.488320 | 3.4:-64300074 | MS.gene38387:CDS |
| GTGCTGAGTGCCAGTGATGC+AGG | 0.488585 | 3.4:-64300403 | MS.gene38387:CDS |
| TTTAGTGGTGGCACCGGCTG+AGG | 0.488675 | 3.4:+64297755 | None:intergenic |
| TTCTCTTGATACTCCACCAT+TGG | 0.489448 | 3.4:+64297515 | None:intergenic |
| TACTTCCTAGATATTGGCCT+AGG | 0.490891 | 3.4:-64300992 | MS.gene38387:CDS |
| CATCTGCTTCACGCTCCGAT+TGG | 0.494722 | 3.4:+64297586 | None:intergenic |
| GACTATTTCATCCAGGGCGA+AGG | 0.499486 | 3.4:-64298394 | MS.gene38387:intron |
| AGAAGTTAGGCCTTCATTCA+GGG | 0.500094 | 3.4:-64301381 | MS.gene38387:CDS |
| ATTCAGCTTTAGAGAAGAAG+AGG | 0.500319 | 3.4:-64299331 | MS.gene38387:CDS |
| AAAACTTAGTGATCATATAT+GGG | 0.502313 | 3.4:-64297364 | MS.gene38387:CDS |
| ACTTGCAAGTCATCGCGATT+GGG | 0.503140 | 3.4:+64297399 | None:intergenic |
| CTCAGCACCTTCTCAAACAA+TGG | 0.504763 | 3.4:+64300418 | None:intergenic |
| GGGAAAGAGTTGTTCCCTGA+CGG | 0.506096 | 3.4:+64301212 | None:intergenic |
| TTCTAATGGCGGTTCTGCAA+AGG | 0.510425 | 3.4:-64299549 | MS.gene38387:CDS |
| TTGCTCGGCCTCCTGGTGAT+GGG | 0.511113 | 3.4:-64301031 | MS.gene38387:CDS |
| TCTAATGGCGGTTCTGCAAA+GGG | 0.512085 | 3.4:-64299548 | MS.gene38387:CDS |
| TTCTTACCCCTCCCATCACC+AGG | 0.513704 | 3.4:+64301020 | None:intergenic |
| ACTACAGACGGAAGACTTGA+GGG | 0.517542 | 3.4:-64301173 | MS.gene38387:CDS |
| GATCTCGGCCCTTGATGAAA+GGG | 0.518190 | 3.4:+64301137 | None:intergenic |
| GCAAACAATACAAGAGCAGC+CGG | 0.519642 | 3.4:+64297716 | None:intergenic |
| GCCAGTGATGCAGGTCGGAT+TGG | 0.520413 | 3.4:-64300394 | MS.gene38387:CDS |
| GTAATCCTAGGCCAATATCT+AGG | 0.520534 | 3.4:+64300987 | None:intergenic |
| GTAACCAACCTGTGTGTCTA+CGG | 0.523912 | 3.4:+64299694 | None:intergenic |
| TTTGGCCTAATAACAACAGC+AGG | 0.525991 | 3.4:-64300087 | MS.gene38387:CDS |
| TTGGCCTAGGATTACGGACC+AGG | 0.525994 | 3.4:-64300979 | MS.gene38387:CDS |
| ACAATGCTTGGCTTGACACT+GGG | 0.526210 | 3.4:+64299203 | None:intergenic |
| CATTTAGTCGGATAGATCCT+GGG | 0.527144 | 3.4:-64299754 | MS.gene38387:CDS |
| ATGCTCTTCTTCCTCCCAAG+TGG | 0.528369 | 3.4:-64298320 | MS.gene38387:CDS |
| AGAAAATAATAGACCAGCAT+GGG | 0.528624 | 3.4:-64301294 | MS.gene38387:CDS |
| AAGATGTGAAGGGTAATGAA+TGG | 0.530191 | 3.4:-64300126 | MS.gene38387:CDS |
| GATGATGAGCAATAATTCAC+TGG | 0.530716 | 3.4:-64299363 | MS.gene38387:CDS |
| AACGAAGGAGGACTAAATAG+AGG | 0.534232 | 3.4:-64297474 | MS.gene38387:CDS |
| GAGGTTGGTGAGTCCAGCGC+TGG | 0.534753 | 3.4:-64297444 | MS.gene38387:CDS |
| GGAAATGAGAATCTTCCATT+GGG | 0.534916 | 3.4:-64299509 | MS.gene38387:CDS |
| AGCTCCTGGTCCGTAATCCT+AGG | 0.537010 | 3.4:+64300975 | None:intergenic |
| ACGGTGTCTAGGATGTTTAG+TGG | 0.537419 | 3.4:+64297740 | None:intergenic |
| TTTCTCAACCACGTATTGCT+CGG | 0.537803 | 3.4:-64301046 | MS.gene38387:CDS |
| AGATCTCGGCCCTTGATGAA+AGG | 0.538168 | 3.4:+64301136 | None:intergenic |
| CTCCGTTCACCAAATGGTAA+CGG | 0.539360 | 3.4:-64299467 | MS.gene38387:CDS |
| GACCCCTTGTATACAGGCCA+TGG | 0.540366 | 3.4:-64300044 | MS.gene38387:CDS |
| TGGAAATGAGAATCTTCCAT+TGG | 0.541952 | 3.4:-64299510 | MS.gene38387:CDS |
| GCACCGGCTGAGGAATCAGC+AGG | 0.542856 | 3.4:+64297765 | None:intergenic |
| TAGGCCTTCATTCAGGGAAG+GGG | 0.543259 | 3.4:-64301375 | MS.gene38387:CDS |
| CAGCAGGATGTACGTATTGG+AGG | 0.545399 | 3.4:-64300071 | MS.gene38387:CDS |
| CAGGCCATGGATTTACGTGC+TGG | 0.546070 | 3.4:-64300031 | MS.gene38387:CDS |
| ATCTTCACCATTAGATTGAG+TGG | 0.548784 | 3.4:+64297266 | None:intergenic |
| GACTACAGACGGAAGACTTG+AGG | 0.549307 | 3.4:-64301174 | MS.gene38387:CDS |
| GTATCTCCTCCCTTTCATCA+AGG | 0.552113 | 3.4:-64301146 | MS.gene38387:CDS |
| GGAGGAAGAAGAGCATCAAC+CGG | 0.553613 | 3.4:+64298327 | None:intergenic |
| GTATCCCCTTCCCTGAATGA+AGG | 0.554684 | 3.4:+64301371 | None:intergenic |
| CGTCTAAGCCAGAAGGCTCA+TGG | 0.559438 | 3.4:+64297829 | None:intergenic |
| AACTCTTTCCCACCATCTGG+TGG | 0.563581 | 3.4:-64301200 | MS.gene38387:CDS |
| TATTCAGCGCCTCTTCATCT+GGG | 0.569422 | 3.4:-64298961 | MS.gene38387:intron |
| TTAGGCCTTCATTCAGGGAA+GGG | 0.570032 | 3.4:-64301376 | MS.gene38387:CDS |
| CCTCATATTACACACTCTGA+AGG | 0.570324 | 3.4:-64300166 | MS.gene38387:CDS |
| AAAATGTCTGGGATACAAGC+AGG | 0.570539 | 3.4:-64298287 | MS.gene38387:intron |
| AGGATGTTTAGTGGTGGCAC+CGG | 0.576776 | 3.4:+64297749 | None:intergenic |
| TCTGTAGTCTCTCCACCAGA+TGG | 0.577437 | 3.4:+64301188 | None:intergenic |
| ACATTTCATTTAGGAACCCC+CGG | 0.578032 | 3.4:-64299002 | MS.gene38387:intron |
| TAGAAAATAATAGACCAGCA+TGG | 0.580283 | 3.4:-64301295 | MS.gene38387:CDS |
| GGAAGTATAGGACGAGATCT+CGG | 0.585045 | 3.4:+64301122 | None:intergenic |
| AGTAGTGCCATTGTTTGAGA+AGG | 0.585604 | 3.4:-64300425 | MS.gene38387:CDS |
| TATCTCCTCCCTTTCATCAA+GGG | 0.585643 | 3.4:-64301145 | MS.gene38387:CDS |
| GTTAGGCCTTCATTCAGGGA+AGG | 0.586129 | 3.4:-64301377 | MS.gene38387:CDS |
| GACATGTTCGGAAAATGTCT+GGG | 0.586198 | 3.4:-64298298 | MS.gene38387:CDS |
| TTCACATCTTGGACCCGCAA+AGG | 0.587006 | 3.4:+64300139 | None:intergenic |
| ACGCAAGAAGAAACGCCAAT+CGG | 0.587841 | 3.4:-64297601 | MS.gene38387:CDS |
| CACACGTTGCAAGTACATGT+TGG | 0.588233 | 3.4:+64297660 | None:intergenic |
| TTTGCGGGTCCAAGATGTGA+AGG | 0.588681 | 3.4:-64300137 | MS.gene38387:CDS |
| TCTCCCAAAAGCTTGTGCTG+AGG | 0.591970 | 3.4:-64300362 | MS.gene38387:intron |
| CTTCCCAAACTGTTAAAGAC+CGG | 0.592604 | 3.4:-64301104 | MS.gene38387:CDS |
| AATAGAGGTCAAGTCGAGGT+TGG | 0.593423 | 3.4:-64297459 | MS.gene38387:CDS |
| ATCAAATTCCGTAGACACAC+AGG | 0.593716 | 3.4:-64299702 | MS.gene38387:intron |
| CCCAAACACATATTCAAAGA+CGG | 0.594377 | 3.4:+64301239 | None:intergenic |
| GTAGTCTCTCCACCAGATGG+TGG | 0.595253 | 3.4:+64301191 | None:intergenic |
| TCCGAACATGTCCACTTGGG+AGG | 0.595376 | 3.4:+64298309 | None:intergenic |
| CAATCGCGATGACTTGCAAG+TGG | 0.596887 | 3.4:-64297397 | MS.gene38387:CDS |
| ATTTGGTGAACGGAGAAGAT+CGG | 0.599027 | 3.4:+64299475 | None:intergenic |
| AGTCAAAAGAATCTGTCTTG+AGG | 0.600336 | 3.4:-64297156 | None:intergenic |
| ATCACCAGCACGTAAATCCA+TGG | 0.602400 | 3.4:+64300027 | None:intergenic |
| GGACTCTTACCCAGATGAAG+AGG | 0.605539 | 3.4:+64298952 | None:intergenic |
| AAACATCCTAGACACCGTCC+CGG | 0.605642 | 3.4:-64297735 | MS.gene38387:CDS |
| ATCCAGGGCGAAGGAACAGT+GGG | 0.611280 | 3.4:-64298385 | MS.gene38387:intron |
| CAATACAAGAGCAGCCGGGA+CGG | 0.612035 | 3.4:+64297721 | None:intergenic |
| ATTTAGTCGGATAGATCCTG+GGG | 0.615648 | 3.4:-64299753 | MS.gene38387:CDS |
| CATCCAGGGCGAAGGAACAG+TGG | 0.616293 | 3.4:-64298386 | MS.gene38387:intron |
| TAGTCTCTCCACCAGATGGT+GGG | 0.617495 | 3.4:+64301192 | None:intergenic |
| ACCAGACGAGCTGAGTTCAA+GGG | 0.617947 | 3.4:-64298142 | MS.gene38387:CDS |
| AGCAGGATGTACGTATTGGA+GGG | 0.621631 | 3.4:-64300070 | MS.gene38387:CDS |
| CTCGGCCCTTGATGAAAGGG+AGG | 0.622138 | 3.4:+64301140 | None:intergenic |
| TATGGAGTTGAGACTTACAT+GGG | 0.625949 | 3.4:-64299255 | MS.gene38387:CDS |
| GCGAATCCTTTGGAAAACGA+AGG | 0.630328 | 3.4:-64297489 | MS.gene38387:CDS |
| TCGGCACAATTACTTCCCAA+TGG | 0.636661 | 3.4:+64299494 | None:intergenic |
| GCCAAGCATTGTCACAATCG+AGG | 0.639692 | 3.4:-64299192 | MS.gene38387:CDS |
| GCGAGAGCGTCTAAGCCAGA+AGG | 0.639894 | 3.4:+64297822 | None:intergenic |
| ATCCATGGCCTGTATACAAG+GGG | 0.641805 | 3.4:+64300042 | None:intergenic |
| CCAGGAGGCCGAGCAATACG+TGG | 0.643456 | 3.4:+64301038 | None:intergenic |
| AATCCTTTGGAAAACGAAGG+AGG | 0.647862 | 3.4:-64297486 | MS.gene38387:CDS |
| AATCCATGGCCTGTATACAA+GGG | 0.649731 | 3.4:+64300041 | None:intergenic |
| ATGCTTGGCTTGACACTGGG+CGG | 0.650343 | 3.4:+64299206 | None:intergenic |
| CAAACAATACAAGAGCAGCC+GGG | 0.651183 | 3.4:+64297717 | None:intergenic |
| AAAGTTAATGACTGAACAGG+CGG | 0.651260 | 3.4:+64301326 | None:intergenic |
| ACATCTGCACATTCTAATGG+CGG | 0.654007 | 3.4:-64299560 | MS.gene38387:CDS |
| GCTCCAGTAACCAAATGTGA+AGG | 0.655029 | 3.4:+64299416 | None:intergenic |
| ATTAATATGAACCAAAATGG+CGG | 0.658414 | 3.4:-64297336 | MS.gene38387:CDS |
| CTCAAACAATGGCACTACTG+TGG | 0.661874 | 3.4:+64300429 | None:intergenic |
| GACGAGTCAGATACCAATGG+TGG | 0.670161 | 3.4:-64297528 | MS.gene38387:CDS |
| TCTGGTGGAGAGACTACAGA+CGG | 0.671314 | 3.4:-64301185 | MS.gene38387:CDS |
| TGTGTTTGGGAAACCCGTCA+GGG | 0.671474 | 3.4:-64301226 | MS.gene38387:CDS |
| GCATGCATGAATCAAATGCG+AGG | 0.672254 | 3.4:-64301262 | MS.gene38387:CDS |
| CCGTTCACCAAATGGTAACG+GGG | 0.672434 | 3.4:-64299465 | MS.gene38387:CDS |
| GTGTCTAGGATGTTTAGTGG+TGG | 0.674341 | 3.4:+64297743 | None:intergenic |
| TTGCGGGTCCAAGATGTGAA+GGG | 0.674468 | 3.4:-64300136 | MS.gene38387:CDS |
| TGTGTACGACCGTGAAACGT+CGG | 0.681271 | 3.4:-64297641 | MS.gene38387:CDS |
| ACTAAATAGAGGTCAAGTCG+AGG | 0.689469 | 3.4:-64297463 | MS.gene38387:CDS |
| GTTGACGAGTCAGATACCAA+TGG | 0.701417 | 3.4:-64297531 | MS.gene38387:CDS |
| TGAGTGCCAGTGATGCAGGT+CGG | 0.705207 | 3.4:-64300399 | MS.gene38387:CDS |
| TTACCCCTCCCATCACCAGG+AGG | 0.730237 | 3.4:+64301023 | None:intergenic |
| TTTAGTCGGATAGATCCTGG+GGG | 0.790573 | 3.4:-64299752 | MS.gene38387:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAAATTTCAGTATAA+AGG | + | chr3.4:64297665-64297684 | None:intergenic | 10.0% |
| !! | ATTAATATGATAATAATCAA+CGG | + | chr3.4:64297777-64297796 | None:intergenic | 10.0% |
| !! | TAATGTAGAAAATAAAAATA+TGG | + | chr3.4:64299481-64299500 | None:intergenic | 10.0% |
| !! | TGGTTATTGTTTAAATAAAT+AGG | - | chr3.4:64299001-64299020 | MS.gene38387:intron | 15.0% |
| !! | TTAAAACGAGTTATTAAATA+GGG | - | chr3.4:64298004-64298023 | MS.gene38387:intron | 15.0% |
| !!! | ACTGAAATTTATAATTTTAG+AGG | - | chr3.4:64297669-64297688 | MS.gene38387:CDS | 15.0% |
| !!! | ATATTTTACAAATTTTTTGG+TGG | - | chr3.4:64300398-64300417 | MS.gene38387:CDS | 15.0% |
| !!! | CTGAAATTTATAATTTTAGA+GGG | - | chr3.4:64297670-64297689 | MS.gene38387:CDS | 15.0% |
| !!! | TTTAAAACGAGTTATTAAAT+AGG | - | chr3.4:64298003-64298022 | MS.gene38387:intron | 15.0% |
| !!! | TTTAAAATTTATGAAGTTTG+TGG | - | chr3.4:64297923-64297942 | MS.gene38387:intron | 15.0% |
| !! | AAAACTTAGTGATCATATAT+GGG | - | chr3.4:64301228-64301247 | MS.gene38387:CDS | 20.0% |
| !! | ATGAATATAGAAACTGAAAA+AGG | - | chr3.4:64297518-64297537 | MS.gene38387:CDS | 20.0% |
| !! | CATATTAATATGAACCAAAA+TGG | - | chr3.4:64301253-64301272 | MS.gene38387:CDS | 20.0% |
| !! | CATTCAGATAAAGATAAAAA+AGG | + | chr3.4:64298301-64298320 | None:intergenic | 20.0% |
| !! | GGTAATACTGATATTATTAA+TGG | + | chr3.4:64300335-64300354 | None:intergenic | 20.0% |
| !! | TAAAGATAAAAAAGGAAACA+CGG | + | chr3.4:64298293-64298312 | None:intergenic | 20.0% |
| !! | TGAATATAGAAACTGAAAAA+GGG | - | chr3.4:64297519-64297538 | MS.gene38387:CDS | 20.0% |
| !! | TTCTGATTTATATGAAACTT+TGG | + | chr3.4:64297810-64297829 | None:intergenic | 20.0% |
| !!! | AAGTTTATGAAAATAGCTTT+TGG | - | chr3.4:64299736-64299755 | MS.gene38387:CDS | 20.0% |
| !!! | AATAAGAGCATTTAATTTGA+TGG | - | chr3.4:64297959-64297978 | MS.gene38387:intron | 20.0% |
| !!! | ACATCTTTACTTTTTGTTTT+TGG | - | chr3.4:64298965-64298984 | MS.gene38387:CDS | 20.0% |
| !!! | TTTTTCAGTTTCTATATTCA+TGG | + | chr3.4:64297519-64297538 | None:intergenic | 20.0% |
| !!! | TTTTTGGTGAATATGATTAA+TGG | - | chr3.4:64298981-64299000 | MS.gene38387:CDS | 20.0% |
| ! | AAAAGTAAGAGATTGCTTAT+TGG | - | chr3.4:64299302-64299321 | MS.gene38387:CDS | 25.0% |
| ! | AACAACATGATTACATCTAA+TGG | - | chr3.4:64297176-64297195 | MS.gene38387:CDS | 25.0% |
| ! | AAGAACTATAAATTATGAGC+AGG | + | chr3.4:64298067-64298086 | None:intergenic | 25.0% |
| ! | ACAACATGATTACATCTAAT+GGG | - | chr3.4:64297177-64297196 | MS.gene38387:CDS | 25.0% |
| ! | AGAACTATAAATTATGAGCA+GGG | + | chr3.4:64298066-64298085 | None:intergenic | 25.0% |
| ! | AGCAAACTTCCTATAATAAT+CGG | - | chr3.4:64299988-64300007 | MS.gene38387:intron | 25.0% |
| ! | ATAATTCGAAGAAAATACCA+TGG | + | chr3.4:64298945-64298964 | None:intergenic | 25.0% |
| ! | ATCCAAATAAGCAAAATGTT+TGG | + | chr3.4:64299664-64299683 | None:intergenic | 25.0% |
| ! | ATTAAATGCTCTTATTGAGT+AGG | + | chr3.4:64297955-64297974 | None:intergenic | 25.0% |
| ! | ATTAATATGAACCAAAATGG+CGG | - | chr3.4:64301256-64301275 | MS.gene38387:CDS | 25.0% |
| ! | ATTTCAGTATTAACTGTTCT+TGG | + | chr3.4:64301283-64301302 | None:intergenic | 25.0% |
| ! | CAAAACTTAGTGATCATATA+TGG | - | chr3.4:64301227-64301246 | MS.gene38387:CDS | 25.0% |
| ! | GAATGTAAACTGATATAGTT+TGG | - | chr3.4:64299516-64299535 | MS.gene38387:CDS | 25.0% |
| ! | GATTTATATGAAACTTTGGA+TGG | + | chr3.4:64297806-64297825 | None:intergenic | 25.0% |
| ! | GTAACAGATCAATTCTATAA+GGG | + | chr3.4:64298702-64298721 | None:intergenic | 25.0% |
| ! | TATCTTTATCTGAATGAGTA+TGG | - | chr3.4:64298305-64298324 | MS.gene38387:CDS | 25.0% |
| ! | TGCTTTCATAAAGCATAAAT+AGG | + | chr3.4:64300120-64300139 | None:intergenic | 25.0% |
| ! | TGTAACAGATCAATTCTATA+AGG | + | chr3.4:64298703-64298722 | None:intergenic | 25.0% |
| !! | AACATTTTGCTTATTTGGAT+TGG | - | chr3.4:64299664-64299683 | MS.gene38387:intron | 25.0% |
| !! | AACTGTTTTCCGATTATTAT+AGG | + | chr3.4:64300000-64300019 | None:intergenic | 25.0% |
| !! | AATATCAGTATTACCACTTT+TGG | - | chr3.4:64300340-64300359 | MS.gene38387:intron | 25.0% |
| !! | GATGTAATCATGTTGTTTAT+CGG | + | chr3.4:64297173-64297192 | None:intergenic | 25.0% |
| !! | TTGAAATTATCATGATGATG+TGG | - | chr3.4:64300141-64300160 | MS.gene38387:CDS | 25.0% |
| !!! | TATTGGTAATGATGATTCTA+TGG | - | chr3.4:64299319-64299338 | MS.gene38387:CDS | 25.0% |
| !!! | TCTCTAAAGCTGAATTTTTT+TGG | + | chr3.4:64299256-64299275 | None:intergenic | 25.0% |
| !!! | TCTTTTTTCTTTGTTCTCAA+CGG | + | chr3.4:64301389-64301408 | None:intergenic | 25.0% |
| AAACTGTTATCGTTACATCA+AGG | + | chr3.4:64298138-64298157 | None:intergenic | 30.0% | |
| AAATACCATGGACAGTAAAA+TGG | + | chr3.4:64298933-64298952 | None:intergenic | 30.0% | |
| AAATGTAATCGGAACAATTC+AGG | + | chr3.4:64300686-64300705 | None:intergenic | 30.0% | |
| AACAGTTAATACTGAAATGC+AGG | - | chr3.4:64301285-64301304 | MS.gene38387:CDS | 30.0% | |
| AACTGTGCTACATTTCATTT+AGG | - | chr3.4:64299581-64299600 | MS.gene38387:intron | 30.0% | |
| AACTGTTATCGTTACATCAA+GGG | + | chr3.4:64298137-64298156 | None:intergenic | 30.0% | |
| AATGTAATCGGAACAATTCA+GGG | + | chr3.4:64300685-64300704 | None:intergenic | 30.0% | |
| AGAAAATAATAGACCAGCAT+GGG | - | chr3.4:64297298-64297317 | MS.gene38387:CDS | 30.0% | |
| ATCAGTTACTTCCTAGATAT+TGG | - | chr3.4:64297594-64297613 | MS.gene38387:CDS | 30.0% | |
| ATTGTTCTCTTTCCAAAAAC+CGG | + | chr3.4:64299612-64299631 | None:intergenic | 30.0% | |
| CAGTTTCTATATTCATGGTA+AGG | + | chr3.4:64297514-64297533 | None:intergenic | 30.0% | |
| CGAAAAACAACTACAGAAAT+TGG | + | chr3.4:64298333-64298352 | None:intergenic | 30.0% | |
| CGTCAAATTGATGCATAATA+AGG | + | chr3.4:64297879-64297898 | None:intergenic | 30.0% | |
| CTACAGTTGAATAGAAAATG+AGG | - | chr3.4:64299921-64299940 | MS.gene38387:intron | 30.0% | |
| GATTATTATACTCATCAGAG+AGG | + | chr3.4:64300663-64300682 | None:intergenic | 30.0% | |
| GGAAAATCAATCAAGAAGTT+AGG | - | chr3.4:64297198-64297217 | MS.gene38387:CDS | 30.0% | |
| TAAAGCATAAATAGGATCCA+AGG | + | chr3.4:64300112-64300131 | None:intergenic | 30.0% | |
| TAGAAAATAATAGACCAGCA+TGG | - | chr3.4:64297297-64297316 | MS.gene38387:CDS | 30.0% | |
| TAGCTATGTAATATGACAAC+TGG | - | chr3.4:64297835-64297854 | MS.gene38387:CDS | 30.0% | |
| TATAAGTGCTTATGTATGAC+TGG | - | chr3.4:64299895-64299914 | MS.gene38387:intron | 30.0% | |
| TCTTATCAAAAACAGACAGA+AGG | + | chr3.4:64300513-64300532 | None:intergenic | 30.0% | |
| TGAATTGTTCCGATTACATT+TGG | - | chr3.4:64300685-64300704 | MS.gene38387:intron | 30.0% | |
| TGTGTCTTCAAGCTATAATT+TGG | - | chr3.4:64298375-64298394 | MS.gene38387:CDS | 30.0% | |
| TTTCTACATTAGCTATTGCA+AGG | - | chr3.4:64299490-64299509 | MS.gene38387:CDS | 30.0% | |
| ! | AATGTGATGATTGCTCTAAA+TGG | - | chr3.4:64300233-64300252 | MS.gene38387:intron | 30.0% |
| ! | ACGTTACTTTATGAAGTATC+GGG | - | chr3.4:64297896-64297915 | MS.gene38387:intron | 30.0% |
| ! | CATGTTCAAGTTATATCACA+TGG | - | chr3.4:64299544-64299563 | MS.gene38387:CDS | 30.0% |
| ! | CTTTTGCAGTTACATTTAGT+CGG | - | chr3.4:64298826-64298845 | MS.gene38387:intron | 30.0% |
| ! | GACGTTACTTTATGAAGTAT+CGG | - | chr3.4:64297895-64297914 | MS.gene38387:intron | 30.0% |
| ! | GGACTTTTCAATTCAGATTT+TGG | - | chr3.4:64298487-64298506 | MS.gene38387:intron | 30.0% |
| ! | GTCCAAACATTTTGCTTATT+TGG | - | chr3.4:64299659-64299678 | MS.gene38387:intron | 30.0% |
| ! | TATGTTGACTATTTCATCCA+GGG | - | chr3.4:64300192-64300211 | MS.gene38387:intron | 30.0% |
| ! | TGGTCTATTATTTTCTAACG+TGG | + | chr3.4:64297294-64297313 | None:intergenic | 30.0% |
| ! | TTTAACAGTTTGGGAAGTAT+AGG | + | chr3.4:64297485-64297504 | None:intergenic | 30.0% |
| !! | AGAGCATTTAATTTGATGGT+TGG | - | chr3.4:64297963-64297982 | MS.gene38387:intron | 30.0% |
| !! | TAAGCAATCTCTTACTTTTG+AGG | + | chr3.4:64299301-64299320 | None:intergenic | 30.0% |
| !!! | AATCTTTTGAAATCCAGCAA+AGG | - | chr3.4:64300481-64300500 | MS.gene38387:intron | 30.0% |
| !!! | GTTGTGAATGTGTTCTTTTT+TGG | + | chr3.4:64301038-64301057 | None:intergenic | 30.0% |
| !!! | GTTTTAGGAGAAAATCTCTT+GGG | - | chr3.4:64300803-64300822 | MS.gene38387:intron | 30.0% |
| !!! | TGTTTTAGGAGAAAATCTCT+TGG | - | chr3.4:64300802-64300821 | MS.gene38387:intron | 30.0% |
| AAAAGGAAACACGGAAAACA+AGG | + | chr3.4:64298284-64298303 | None:intergenic | 35.0% | |
| AAAGTTAATGACTGAACAGG+CGG | + | chr3.4:64297269-64297288 | None:intergenic | 35.0% | |
| AAGAAGAGGACTCGAAATAT+TGG | - | chr3.4:64299275-64299294 | MS.gene38387:CDS | 35.0% | |
| AAGATGTGAAGGGTAATGAA+TGG | - | chr3.4:64298466-64298485 | MS.gene38387:intron | 35.0% | |
| ATACTGGTATGCATCAATCT+AGG | - | chr3.4:64298586-64298605 | MS.gene38387:intron | 35.0% | |
| ATCTTCACCATTAGATTGAG+TGG | + | chr3.4:64301329-64301348 | None:intergenic | 35.0% | |
| ATTCATTACCCTTCACATCT+TGG | + | chr3.4:64298467-64298486 | None:intergenic | 35.0% | |
| ATTCTCATTTCCACCAGAAA+AGG | + | chr3.4:64299075-64299094 | None:intergenic | 35.0% | |
| CAGTGTTTATAATGAGCAAG+TGG | + | chr3.4:64297738-64297757 | None:intergenic | 35.0% | |
| CCCAAACACATATTCAAAGA+CGG | + | chr3.4:64297356-64297375 | None:intergenic | 35.0% | |
| CCGTCTTTGAATATGTGTTT+GGG | - | chr3.4:64297353-64297372 | MS.gene38387:CDS | 35.0% | |
| CTCATTTGTTCTTACTTGAG+AGG | - | chr3.4:64298755-64298774 | MS.gene38387:intron | 35.0% | |
| CTCTAAATGGAGAAAGTTAC+CGG | - | chr3.4:64300246-64300265 | MS.gene38387:intron | 35.0% | |
| CTCTCAAGTAAGAACAAATG+AGG | + | chr3.4:64298757-64298776 | None:intergenic | 35.0% | |
| CTGTGAACACCAAATGTAAT+CGG | + | chr3.4:64300697-64300716 | None:intergenic | 35.0% | |
| GATCTTCATCTGTCATGTTT+AGG | - | chr3.4:64300531-64300550 | MS.gene38387:intron | 35.0% | |
| GATGATGAGCAATAATTCAC+TGG | - | chr3.4:64299229-64299248 | MS.gene38387:CDS | 35.0% | |
| GCAAAAGTTAATGACTGAAC+AGG | + | chr3.4:64297272-64297291 | None:intergenic | 35.0% | |
| GGAAATGAGAATCTTCCATT+GGG | - | chr3.4:64299083-64299102 | MS.gene38387:intron | 35.0% | |
| TACTGGTATGCATCAATCTA+GGG | - | chr3.4:64298587-64298606 | MS.gene38387:intron | 35.0% | |
| TATGGAGTTGAGACTTACAT+GGG | - | chr3.4:64299337-64299356 | MS.gene38387:CDS | 35.0% | |
| TCACTATCTCATATGAAGAC+TGG | + | chr3.4:64300374-64300393 | None:intergenic | 35.0% | |
| TCTACATCTGCACATTCTAA+TGG | - | chr3.4:64299029-64299048 | MS.gene38387:intron | 35.0% | |
| TCTGCTTAAGCTTGTATATG+TGG | - | chr3.4:64299949-64299968 | MS.gene38387:intron | 35.0% | |
| TGGAAATGAGAATCTTCCAT+TGG | - | chr3.4:64299082-64299101 | MS.gene38387:intron | 35.0% | |
| TGGACTTCTTACAAAATTGC+AGG | - | chr3.4:64298395-64298414 | MS.gene38387:intron | 35.0% | |
| TTCTATATTCATGGTAAGGC+CGG | + | chr3.4:64297510-64297529 | None:intergenic | 35.0% | |
| TTCTCCTAAAACAGCTAAAC+TGG | + | chr3.4:64300795-64300814 | None:intergenic | 35.0% | |
| TTGTTCTCTTTCCAAAAACC+GGG | + | chr3.4:64299611-64299630 | None:intergenic | 35.0% | |
| TTTCTTCTTGCGTAGCATAA+GGG | + | chr3.4:64300984-64301003 | None:intergenic | 35.0% | |
| ! | ACTGGTCTAAATTCCAAAAG+TGG | + | chr3.4:64300356-64300375 | None:intergenic | 35.0% |
| ! | CAAAACCATTTTACTGTCCA+TGG | - | chr3.4:64298925-64298944 | MS.gene38387:intron | 35.0% |
| ! | GTATGTTGACTATTTCATCC+AGG | - | chr3.4:64300191-64300210 | MS.gene38387:intron | 35.0% |
| ! | TACATCCTGCTGTTGTTATT+AGG | + | chr3.4:64298513-64298532 | None:intergenic | 35.0% |
| ! | TAGATATTGGCCTAGGATTA+CGG | - | chr3.4:64297607-64297626 | MS.gene38387:CDS | 35.0% |
| ! | TTTGAAATCCAGCAAAGGTA+TGG | - | chr3.4:64300486-64300505 | MS.gene38387:intron | 35.0% |
| ! | TTTTTCTTTGTTCTCAACGG+TGG | + | chr3.4:64301386-64301405 | None:intergenic | 35.0% |
| !! | ATTCAGCTTTAGAGAAGAAG+AGG | - | chr3.4:64299261-64299280 | MS.gene38387:CDS | 35.0% |
| !! | TCACAGATTTTAAGAAGCGA+CGG | - | chr3.4:64300711-64300730 | MS.gene38387:intron | 35.0% |
| !! | TTATGAGTAAGCCGTTTTCA+CGG | - | chr3.4:64300019-64300038 | MS.gene38387:intron | 35.0% |
| !! | TTTTGAGAAAGCCGTGAAAA+CGG | + | chr3.4:64300033-64300052 | None:intergenic | 35.0% |
| !!! | GTGAATGTGTTCTTTTTTGG+CGG | + | chr3.4:64301035-64301054 | None:intergenic | 35.0% |
| AAATCCATGGCCTGTATACA+AGG | + | chr3.4:64298555-64298574 | None:intergenic | 40.0% | |
| AACGAAGGAGGACTAAATAG+AGG | - | chr3.4:64301118-64301137 | MS.gene38387:CDS | 40.0% | |
| AAGAAGTTAGGCCTTCATTC+AGG | - | chr3.4:64297210-64297229 | MS.gene38387:CDS | 40.0% | |
| AAGAGAAGTTGCGAATCCTT+TGG | - | chr3.4:64301093-64301112 | MS.gene38387:CDS | 40.0% | |
| AAGCTCTTTCAGACATTCCT+TGG | - | chr3.4:64300092-64300111 | MS.gene38387:CDS | 40.0% | |
| AATCCATGGCCTGTATACAA+GGG | + | chr3.4:64298554-64298573 | None:intergenic | 40.0% | |
| ACATCCTGAACCTTCACATT+TGG | - | chr3.4:64299166-64299185 | MS.gene38387:intron | 40.0% | |
| ACATCTGCACATTCTAATGG+CGG | - | chr3.4:64299032-64299051 | MS.gene38387:intron | 40.0% | |
| ACATTTAGTCGGATAGATCC+TGG | - | chr3.4:64298837-64298856 | MS.gene38387:intron | 40.0% | |
| ACATTTCATTTAGGAACCCC+CGG | - | chr3.4:64299590-64299609 | MS.gene38387:intron | 40.0% | |
| ACTAAATAGAGGTCAAGTCG+AGG | - | chr3.4:64301129-64301148 | MS.gene38387:CDS | 40.0% | |
| ACTAAGCTCAGAGTTAACCT+TGG | - | chr3.4:64298029-64298048 | MS.gene38387:intron | 40.0% | |
| AGAAGTTAGGCCTTCATTCA+GGG | - | chr3.4:64297211-64297230 | MS.gene38387:CDS | 40.0% | |
| ATCAAATTCCGTAGACACAC+AGG | - | chr3.4:64298890-64298909 | MS.gene38387:intron | 40.0% | |
| ATTTAGTCGGATAGATCCTG+GGG | - | chr3.4:64298839-64298858 | MS.gene38387:intron | 40.0% | |
| CATCACACAACATAATCACG+CGG | + | chr3.4:64300063-64300082 | None:intergenic | 40.0% | |
| CATTTAGTCGGATAGATCCT+GGG | - | chr3.4:64298838-64298857 | MS.gene38387:intron | 40.0% | |
| CCTCATATTACACACTCTGA+AGG | - | chr3.4:64298426-64298445 | MS.gene38387:intron | 40.0% | |
| CCTTCAGAGTGTGTAATATG+AGG | + | chr3.4:64298429-64298448 | None:intergenic | 40.0% | |
| CTATGGAGTTGAGACTTACA+TGG | - | chr3.4:64299336-64299355 | MS.gene38387:CDS | 40.0% | |
| CTTCCCAAACTGTTAAAGAC+CGG | - | chr3.4:64297488-64297507 | MS.gene38387:CDS | 40.0% | |
| GAACCTTCACATTTGGTTAC+TGG | - | chr3.4:64299173-64299192 | MS.gene38387:CDS | 40.0% | |
| GACATGTTCGGAAAATGTCT+GGG | - | chr3.4:64300294-64300313 | MS.gene38387:intron | 40.0% | |
| GCAGGAAGTTCAACATTCTT+TGG | - | chr3.4:64301303-64301322 | MS.gene38387:CDS | 40.0% | |
| GCCGTCTTTGAATATGTGTT+TGG | - | chr3.4:64297352-64297371 | MS.gene38387:CDS | 40.0% | |
| GTAACCAAATGTGAAGGTTC+AGG | + | chr3.4:64299173-64299192 | None:intergenic | 40.0% | |
| GTAATCCTAGGCCAATATCT+AGG | + | chr3.4:64297608-64297627 | None:intergenic | 40.0% | |
| GTTTCTTCTTGCGTAGCATA+AGG | + | chr3.4:64300985-64301004 | None:intergenic | 40.0% | |
| TATCTCCTCCCTTTCATCAA+GGG | - | chr3.4:64297447-64297466 | MS.gene38387:CDS | 40.0% | |
| TCTTTGGCCACTCAATCTAA+TGG | - | chr3.4:64301319-64301338 | MS.gene38387:CDS | 40.0% | |
| TGTTCTCTTTCCAAAAACCG+GGG | + | chr3.4:64299610-64299629 | None:intergenic | 40.0% | |
| TTCTCTTGATACTCCACCAT+TGG | + | chr3.4:64301080-64301099 | None:intergenic | 40.0% | |
| TTTCTCAACCACGTATTGCT+CGG | - | chr3.4:64297546-64297565 | MS.gene38387:CDS | 40.0% | |
| TTTGGCCTAATAACAACAGC+AGG | - | chr3.4:64298505-64298524 | MS.gene38387:intron | 40.0% | |
| ! | AAAATGTCTGGGATACAAGC+AGG | - | chr3.4:64300305-64300324 | MS.gene38387:intron | 40.0% |
| ! | AAACCTCAGCACAAGCTTTT+GGG | + | chr3.4:64298236-64298255 | None:intergenic | 40.0% |
| ! | AATCCTTTGGAAAACGAAGG+AGG | - | chr3.4:64301106-64301125 | MS.gene38387:CDS | 40.0% |
| ! | AGTAGTGCCATTGTTTGAGA+AGG | - | chr3.4:64298167-64298186 | MS.gene38387:intron | 40.0% |
| ! | ATGCTTTTAATCTCCCATGC+TGG | + | chr3.4:64297314-64297333 | None:intergenic | 40.0% |
| ! | ATTTGGTGAACGGAGAAGAT+CGG | + | chr3.4:64299120-64299139 | None:intergenic | 40.0% |
| ! | ATTTTCCGAACATGTCCACT+TGG | + | chr3.4:64300290-64300309 | None:intergenic | 40.0% |
| ! | GGTTTGCTTAAAGCCGAAAA+TGG | - | chr3.4:64299203-64299222 | MS.gene38387:CDS | 40.0% |
| ! | TACTTCCTAGATATTGGCCT+AGG | - | chr3.4:64297600-64297619 | MS.gene38387:CDS | 40.0% |
| ! | TTTTCCGAACATGTCCACTT+GGG | + | chr3.4:64300289-64300308 | None:intergenic | 40.0% |
| !!! | TTTGGTGGACATGCTTTTTC+AGG | - | chr3.4:64300413-64300432 | MS.gene38387:CDS | 40.0% |
| AACAACTCTTTCCCACCATC+TGG | - | chr3.4:64297389-64297408 | MS.gene38387:CDS | 45.0% | |
| AAGGCCGGTCTTTAACAGTT+TGG | + | chr3.4:64297495-64297514 | None:intergenic | 45.0% | |
| AATAGAGGTCAAGTCGAGGT+TGG | - | chr3.4:64301133-64301152 | MS.gene38387:CDS | 45.0% | |
| AATTCCGTAGACACACAGGT+TGG | - | chr3.4:64298894-64298913 | MS.gene38387:intron | 45.0% | |
| ACGCAAGAAGAAACGCCAAT+CGG | - | chr3.4:64300991-64301010 | MS.gene38387:CDS | 45.0% | |
| ACTACAGACGGAAGACTTGA+GGG | - | chr3.4:64297419-64297438 | MS.gene38387:CDS | 45.0% | |
| ACTTGCAAGTCATCGCGATT+GGG | + | chr3.4:64301196-64301215 | None:intergenic | 45.0% | |
| AGCAGGATGTACGTATTGGA+GGG | - | chr3.4:64298522-64298541 | MS.gene38387:intron | 45.0% | |
| AGGCCGGTCTTTAACAGTTT+GGG | + | chr3.4:64297494-64297513 | None:intergenic | 45.0% | |
| ATATTCAGCGCCTCTTCATC+TGG | - | chr3.4:64299630-64299649 | MS.gene38387:intron | 45.0% | |
| ATCACCAGCACGTAAATCCA+TGG | + | chr3.4:64298568-64298587 | None:intergenic | 45.0% | |
| ATCCATGGCCTGTATACAAG+GGG | + | chr3.4:64298553-64298572 | None:intergenic | 45.0% | |
| CAAACAATACAAGAGCAGCC+GGG | + | chr3.4:64300878-64300897 | None:intergenic | 45.0% | |
| CAACAGCAGGATGTACGTAT+TGG | - | chr3.4:64298518-64298537 | MS.gene38387:intron | 45.0% | |
| CACACGTTGCAAGTACATGT+TGG | + | chr3.4:64300935-64300954 | None:intergenic | 45.0% | |
| CTCAAACAATGGCACTACTG+TGG | + | chr3.4:64298166-64298185 | None:intergenic | 45.0% | |
| CTCAGCACCTTCTCAAACAA+TGG | + | chr3.4:64298177-64298196 | None:intergenic | 45.0% | |
| CTCCGTTCACCAAATGGTAA+CGG | - | chr3.4:64299125-64299144 | MS.gene38387:intron | 45.0% | |
| GATCTTCTCCGTTCACCAAA+TGG | - | chr3.4:64299119-64299138 | MS.gene38387:intron | 45.0% | |
| GCAAACAATACAAGAGCAGC+CGG | + | chr3.4:64300879-64300898 | None:intergenic | 45.0% | |
| GCATGCATGAATCAAATGCG+AGG | - | chr3.4:64297330-64297349 | MS.gene38387:CDS | 45.0% | |
| GCTCCAGTAACCAAATGTGA+AGG | + | chr3.4:64299179-64299198 | None:intergenic | 45.0% | |
| GGACATGTTCGGAAAATGTC+TGG | - | chr3.4:64300293-64300312 | MS.gene38387:intron | 45.0% | |
| GGGCAAGATCAAGATACTCT+AGG | - | chr3.4:64297690-64297709 | MS.gene38387:CDS | 45.0% | |
| GTAACCAACCTGTGTGTCTA+CGG | + | chr3.4:64298901-64298920 | None:intergenic | 45.0% | |
| GTATCTCCTCCCTTTCATCA+AGG | - | chr3.4:64297446-64297465 | MS.gene38387:CDS | 45.0% | |
| GTTCTCTTTCCAAAAACCGG+GGG | + | chr3.4:64299609-64299628 | None:intergenic | 45.0% | |
| GTTGACGAGTCAGATACCAA+TGG | - | chr3.4:64301061-64301080 | MS.gene38387:CDS | 45.0% | |
| TAGATCTATCTTTCCAGCGC+TGG | + | chr3.4:64301164-64301183 | None:intergenic | 45.0% | |
| TATTCAGCGCCTCTTCATCT+GGG | - | chr3.4:64299631-64299650 | MS.gene38387:intron | 45.0% | |
| TCCGTTCACCAAATGGTAAC+GGG | - | chr3.4:64299126-64299145 | MS.gene38387:intron | 45.0% | |
| TCCTCGATTGTGACAATGCT+TGG | + | chr3.4:64299404-64299423 | None:intergenic | 45.0% | |
| TCGGCACAATTACTTCCCAA+TGG | + | chr3.4:64299101-64299120 | None:intergenic | 45.0% | |
| TCTAATGGCGGTTCTGCAAA+GGG | - | chr3.4:64299044-64299063 | MS.gene38387:intron | 45.0% | |
| TTAGGCCTTCATTCAGGGAA+GGG | - | chr3.4:64297216-64297235 | MS.gene38387:CDS | 45.0% | |
| TTCTAATGGCGGTTCTGCAA+AGG | - | chr3.4:64299043-64299062 | MS.gene38387:intron | 45.0% | |
| TTTAGTCGGATAGATCCTGG+GGG | - | chr3.4:64298840-64298859 | MS.gene38387:intron | 45.0% | |
| ! | AAGGGAGATACCTTTTCTGG+TGG | - | chr3.4:64299062-64299081 | MS.gene38387:intron | 45.0% |
| ! | ACAATGCTTGGCTTGACACT+GGG | + | chr3.4:64299392-64299411 | None:intergenic | 45.0% |
| ! | ACGGTGTCTAGGATGTTTAG+TGG | + | chr3.4:64300855-64300874 | None:intergenic | 45.0% |
| ! | ACTCTGAAGGTCTTCCTTTG+CGG | - | chr3.4:64298439-64298458 | MS.gene38387:intron | 45.0% |
| ! | AGTCCTCCTTCGTTTTCCAA+AGG | + | chr3.4:64301112-64301131 | None:intergenic | 45.0% |
| ! | ATTTAGGAACCCCCGGTTTT+TGG | - | chr3.4:64299597-64299616 | MS.gene38387:intron | 45.0% |
| ! | CAAACCTCAGCACAAGCTTT+TGG | + | chr3.4:64298237-64298256 | None:intergenic | 45.0% |
| ! | GATTTACGTGCTGGTGATAC+TGG | - | chr3.4:64298570-64298589 | MS.gene38387:intron | 45.0% |
| ! | GCAAAGGGAGATACCTTTTC+TGG | - | chr3.4:64299059-64299078 | MS.gene38387:intron | 45.0% |
| ! | GCGAATCCTTTGGAAAACGA+AGG | - | chr3.4:64301103-64301122 | MS.gene38387:CDS | 45.0% |
| ! | GGAAGTATAGGACGAGATCT+CGG | + | chr3.4:64297473-64297492 | None:intergenic | 45.0% |
| ! | GTGTCTAGGATGTTTAGTGG+TGG | + | chr3.4:64300852-64300871 | None:intergenic | 45.0% |
| ! | TGTGTCTCCCTTTTCCACTT+GGG | + | chr3.4:64300910-64300929 | None:intergenic | 45.0% |
| ! | TTGTGTCTCCCTTTTCCACT+TGG | + | chr3.4:64300911-64300930 | None:intergenic | 45.0% |
| !! | CCTGGGGGAAAACTTGTTAT+GGG | - | chr3.4:64298855-64298874 | MS.gene38387:intron | 45.0% |
| !! | CTCGCCAGTTTAGCTGTTTT+AGG | - | chr3.4:64300788-64300807 | MS.gene38387:intron | 45.0% |
| !! | GCTCATCATCTCGCCATTTT+CGG | + | chr3.4:64299219-64299238 | None:intergenic | 45.0% |
| !! | TCCTGGGGGAAAACTTGTTA+TGG | - | chr3.4:64298854-64298873 | MS.gene38387:intron | 45.0% |
| !!! | GGTTTTGAACCGACGTTTCA+CGG | + | chr3.4:64300963-64300982 | None:intergenic | 45.0% |
| !!! | AAAATATTTTACAAATTTTT+TGG | - | chr3.4:64300395-64300414 | MS.gene38387:CDS | 5.0% |
| AAACATCCTAGACACCGTCC+CGG | - | chr3.4:64300857-64300876 | MS.gene38387:intron | 50.0% | |
| AACGGGGAACTTCGCTCAAA+TGG | - | chr3.4:64299143-64299162 | MS.gene38387:intron | 50.0% | |
| AACTCTTTCCCACCATCTGG+TGG | - | chr3.4:64297392-64297411 | MS.gene38387:CDS | 50.0% | |
| ACCAGACGAGCTGAGTTCAA+GGG | - | chr3.4:64300450-64300469 | MS.gene38387:intron | 50.0% | |
| AGATCTCGGCCCTTGATGAA+AGG | + | chr3.4:64297459-64297478 | None:intergenic | 50.0% | |
| AGGATGTTTAGTGGTGGCAC+CGG | + | chr3.4:64300846-64300865 | None:intergenic | 50.0% | |
| ATCCAAGACCATGAGCCTTC+TGG | - | chr3.4:64300755-64300774 | MS.gene38387:intron | 50.0% | |
| ATGCTCTTCTTCCTCCCAAG+TGG | - | chr3.4:64300272-64300291 | MS.gene38387:intron | 50.0% | |
| ATGTGTTTGGGAAACCCGTC+AGG | - | chr3.4:64297365-64297384 | MS.gene38387:CDS | 50.0% | |
| ATTCAGCCCCCAAGTGGAAA+AGG | - | chr3.4:64300899-64300918 | MS.gene38387:intron | 50.0% | |
| CACAACATAATCACGCGGCA+CGG | + | chr3.4:64300058-64300077 | None:intergenic | 50.0% | |
| CACTTGCAAGTCATCGCGAT+TGG | + | chr3.4:64301197-64301216 | None:intergenic | 50.0% | |
| CAGAAGGACCATACCTTTGC+TGG | + | chr3.4:64300497-64300516 | None:intergenic | 50.0% | |
| CAGCAGGATGTACGTATTGG+AGG | - | chr3.4:64298521-64298540 | MS.gene38387:intron | 50.0% | |
| CATTTGGTTACTGGAGCTGC+TGG | - | chr3.4:64299182-64299201 | MS.gene38387:CDS | 50.0% | |
| CGAAGTTCCCCGTTACCATT+TGG | + | chr3.4:64299137-64299156 | None:intergenic | 50.0% | |
| GACGAGTCAGATACCAATGG+TGG | - | chr3.4:64301064-64301083 | MS.gene38387:CDS | 50.0% | |
| GACTACAGACGGAAGACTTG+AGG | - | chr3.4:64297418-64297437 | MS.gene38387:CDS | 50.0% | |
| GACTATTTCATCCAGGGCGA+AGG | - | chr3.4:64300198-64300217 | MS.gene38387:intron | 50.0% | |
| GATCTCGGCCCTTGATGAAA+GGG | + | chr3.4:64297458-64297477 | None:intergenic | 50.0% | |
| GCAGGGATCAAGTTACTCCA+AGG | + | chr3.4:64298049-64298068 | None:intergenic | 50.0% | |
| GGAAAGAGTTGTTCCCTGAC+GGG | + | chr3.4:64297382-64297401 | None:intergenic | 50.0% | |
| GGACTCTTACCCAGATGAAG+AGG | + | chr3.4:64299643-64299662 | None:intergenic | 50.0% | |
| GGGAAAGAGTTGTTCCCTGA+CGG | + | chr3.4:64297383-64297402 | None:intergenic | 50.0% | |
| GTATCCCCTTCCCTGAATGA+AGG | + | chr3.4:64297224-64297243 | None:intergenic | 50.0% | |
| GTTAGGCCTTCATTCAGGGA+AGG | - | chr3.4:64297215-64297234 | MS.gene38387:CDS | 50.0% | |
| TAGGCCTTCATTCAGGGAAG+GGG | - | chr3.4:64297217-64297236 | MS.gene38387:CDS | 50.0% | |
| TAGTCTCTCCACCAGATGGT+GGG | + | chr3.4:64297403-64297422 | None:intergenic | 50.0% | |
| TCATTCAGGGAAGGGGATAC+TGG | - | chr3.4:64297224-64297243 | MS.gene38387:CDS | 50.0% | |
| TCCTCCCAAGTGGACATGTT+CGG | - | chr3.4:64300282-64300301 | MS.gene38387:intron | 50.0% | |
| TCTCCCAAAAGCTTGTGCTG+AGG | - | chr3.4:64298230-64298249 | MS.gene38387:intron | 50.0% | |
| TCTGGTGGAGAGACTACAGA+CGG | - | chr3.4:64297407-64297426 | MS.gene38387:CDS | 50.0% | |
| TCTGTAGTCTCTCCACCAGA+TGG | + | chr3.4:64297407-64297426 | None:intergenic | 50.0% | |
| TGTGTACGACCGTGAAACGT+CGG | - | chr3.4:64300951-64300970 | MS.gene38387:intron | 50.0% | |
| TGTGTTTGGGAAACCCGTCA+GGG | - | chr3.4:64297366-64297385 | MS.gene38387:CDS | 50.0% | |
| TTCACATCTTGGACCCGCAA+AGG | + | chr3.4:64298456-64298475 | None:intergenic | 50.0% | |
| TTCAGCCCCCAAGTGGAAAA+GGG | - | chr3.4:64300900-64300919 | MS.gene38387:intron | 50.0% | |
| TTGCGGGTCCAAGATGTGAA+GGG | - | chr3.4:64298456-64298475 | MS.gene38387:intron | 50.0% | |
| TTTGCGGGTCCAAGATGTGA+AGG | - | chr3.4:64298455-64298474 | MS.gene38387:intron | 50.0% | |
| ! | CAATCGCGATGACTTGCAAG+TGG | - | chr3.4:64301195-64301214 | MS.gene38387:CDS | 50.0% |
| ! | CCCATAACAAGTTTTCCCCC+AGG | + | chr3.4:64298858-64298877 | None:intergenic | 50.0% |
| ! | CCCCGTTACCATTTGGTGAA+CGG | + | chr3.4:64299130-64299149 | None:intergenic | 50.0% |
| ! | CCGTTCACCAAATGGTAACG+GGG | - | chr3.4:64299127-64299146 | MS.gene38387:intron | 50.0% |
| ! | CTCTGAAGGTCTTCCTTTGC+GGG | - | chr3.4:64298440-64298459 | MS.gene38387:intron | 50.0% |
| ! | CTGTTCTTGGACCGCCATTT+TGG | + | chr3.4:64301270-64301289 | None:intergenic | 50.0% |
| ! | GACAATGCTTGGCTTGACAC+TGG | + | chr3.4:64299393-64299412 | None:intergenic | 50.0% |
| ! | GCCAAGCATTGTCACAATCG+AGG | - | chr3.4:64299400-64299419 | MS.gene38387:CDS | 50.0% |
| ! | GTGTCTCCCTTTTCCACTTG+GGG | + | chr3.4:64300909-64300928 | None:intergenic | 50.0% |
| ! | TGTCTCCCTTTTCCACTTGG+GGG | + | chr3.4:64300908-64300927 | None:intergenic | 50.0% |
| !! | GGAGGAAGAAGAGCATCAAC+CGG | + | chr3.4:64300268-64300287 | None:intergenic | 50.0% |
| ACCAATCCGACCTGCATCAC+TGG | + | chr3.4:64298202-64298221 | None:intergenic | 55.0% | |
| AGCCAGAAGGCTCATGGTCT+TGG | + | chr3.4:64300760-64300779 | None:intergenic | 55.0% | |
| AGCTCCTGGTCCGTAATCCT+AGG | + | chr3.4:64297620-64297639 | None:intergenic | 55.0% | |
| ATCCAGGGCGAAGGAACAGT+GGG | - | chr3.4:64300207-64300226 | MS.gene38387:intron | 55.0% | |
| CAATACAAGAGCAGCCGGGA+CGG | + | chr3.4:64300874-64300893 | None:intergenic | 55.0% | |
| CACCAGACGAGCTGAGTTCA+AGG | - | chr3.4:64300449-64300468 | MS.gene38387:intron | 55.0% | |
| CAGGCCATGGATTTACGTGC+TGG | - | chr3.4:64298561-64298580 | MS.gene38387:intron | 55.0% | |
| CATCTGCTTCACGCTCCGAT+TGG | + | chr3.4:64301009-64301028 | None:intergenic | 55.0% | |
| CGTCTAAGCCAGAAGGCTCA+TGG | + | chr3.4:64300766-64300785 | None:intergenic | 55.0% | |
| GACCCCTTGTATACAGGCCA+TGG | - | chr3.4:64298548-64298567 | MS.gene38387:intron | 55.0% | |
| GGGTGTGACCCCTTGTATAC+AGG | - | chr3.4:64298542-64298561 | MS.gene38387:intron | 55.0% | |
| GTAGTCTCTCCACCAGATGG+TGG | + | chr3.4:64297404-64297423 | None:intergenic | 55.0% | |
| GTTTGCATTCAGCCCCCAAG+TGG | - | chr3.4:64300893-64300912 | MS.gene38387:intron | 55.0% | |
| TAGGATTACGGACCAGGAGC+TGG | - | chr3.4:64297619-64297638 | MS.gene38387:CDS | 55.0% | |
| TCCCTTGAACTCAGCTCGTC+TGG | + | chr3.4:64300454-64300473 | None:intergenic | 55.0% | |
| TCCGAACATGTCCACTTGGG+AGG | + | chr3.4:64300286-64300305 | None:intergenic | 55.0% | |
| TGAGTGCCAGTGATGCAGGT+CGG | - | chr3.4:64298193-64298212 | MS.gene38387:intron | 55.0% | |
| TTCTTACCCCTCCCATCACC+AGG | + | chr3.4:64297575-64297594 | None:intergenic | 55.0% | |
| TTGGCCTAGGATTACGGACC+AGG | - | chr3.4:64297613-64297632 | MS.gene38387:CDS | 55.0% | |
| ! | ATGCTTGGCTTGACACTGGG+CGG | + | chr3.4:64299389-64299408 | None:intergenic | 55.0% |
| ATTGCTCGGCCTCCTGGTGA+TGG | - | chr3.4:64297560-64297579 | MS.gene38387:CDS | 60.0% | |
| CATCCAGGGCGAAGGAACAG+TGG | - | chr3.4:64300206-64300225 | MS.gene38387:intron | 60.0% | |
| CTCGGCCCTTGATGAAAGGG+AGG | + | chr3.4:64297455-64297474 | None:intergenic | 60.0% | |
| GCCAGTGATGCAGGTCGGAT+TGG | - | chr3.4:64298198-64298217 | MS.gene38387:intron | 60.0% | |
| GTGCTGAGTGCCAGTGATGC+AGG | - | chr3.4:64298189-64298208 | MS.gene38387:intron | 60.0% | |
| TTACCCCTCCCATCACCAGG+AGG | + | chr3.4:64297572-64297591 | None:intergenic | 60.0% | |
| TTGCTCGGCCTCCTGGTGAT+GGG | - | chr3.4:64297561-64297580 | MS.gene38387:CDS | 60.0% | |
| ! | CAGGAGCTGGAGCGTTTGTC+GGG | - | chr3.4:64297632-64297651 | MS.gene38387:CDS | 60.0% |
| ! | CCAGGAGCTGGAGCGTTTGT+CGG | - | chr3.4:64297631-64297650 | MS.gene38387:CDS | 60.0% |
| !! | GCGAGAGCGTCTAAGCCAGA+AGG | + | chr3.4:64300773-64300792 | None:intergenic | 60.0% |
| !! | GGACCTGCTGATTCCTCAGC+CGG | - | chr3.4:64300824-64300843 | MS.gene38387:intron | 60.0% |
| !! | TTTAGTGGTGGCACCGGCTG+AGG | + | chr3.4:64300840-64300859 | None:intergenic | 60.0% |
| AGCCCACTGTTCCTTCGCCC+TGG | + | chr3.4:64300212-64300231 | None:intergenic | 65.0% | |
| CCACGTATTGCTCGGCCTCC+TGG | - | chr3.4:64297554-64297573 | MS.gene38387:CDS | 65.0% | |
| CCAGGAGGCCGAGCAATACG+TGG | + | chr3.4:64297557-64297576 | None:intergenic | 65.0% | |
| CCGACAAACGCTCCAGCTCC+TGG | + | chr3.4:64297634-64297653 | None:intergenic | 65.0% | |
| ! | CTTGGCTTGACACTGGGCGG+TGG | + | chr3.4:64299386-64299405 | None:intergenic | 65.0% |
| !! | GCACCGGCTGAGGAATCAGC+AGG | + | chr3.4:64300830-64300849 | None:intergenic | 65.0% |
| !! | TCGGCCTCCTGGTGATGGGA+GGG | - | chr3.4:64297565-64297584 | MS.gene38387:CDS | 65.0% |
| GAGCAGCCGGGACGGTGTCT+AGG | + | chr3.4:64300866-64300885 | None:intergenic | 70.0% | |
| !! | CGGCCTCCTGGTGATGGGAG+GGG | - | chr3.4:64297566-64297585 | MS.gene38387:CDS | 70.0% |
| !! | CTCGGCCTCCTGGTGATGGG+AGG | - | chr3.4:64297564-64297583 | MS.gene38387:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 64297158 | 64301456 | 64297158 | ID=MS.gene38387 |
| chr3.4 | mRNA | 64297158 | 64301456 | 64297158 | ID=MS.gene38387.t1;Parent=MS.gene38387 |
| chr3.4 | exon | 64300957 | 64301456 | 64300957 | ID=MS.gene38387.t1.exon1;Parent=MS.gene38387.t1 |
| chr3.4 | CDS | 64300957 | 64301456 | 64300957 | ID=cds.MS.gene38387.t1;Parent=MS.gene38387.t1 |
| chr3.4 | exon | 64300363 | 64300459 | 64300363 | ID=MS.gene38387.t1.exon2;Parent=MS.gene38387.t1 |
| chr3.4 | CDS | 64300363 | 64300459 | 64300363 | ID=cds.MS.gene38387.t1;Parent=MS.gene38387.t1 |
| chr3.4 | exon | 64300023 | 64300197 | 64300023 | ID=MS.gene38387.t1.exon3;Parent=MS.gene38387.t1 |
| chr3.4 | CDS | 64300023 | 64300197 | 64300023 | ID=cds.MS.gene38387.t1;Parent=MS.gene38387.t1 |
| chr3.4 | exon | 64299703 | 64299779 | 64299703 | ID=MS.gene38387.t1.exon4;Parent=MS.gene38387.t1 |
| chr3.4 | CDS | 64299703 | 64299779 | 64299703 | ID=cds.MS.gene38387.t1;Parent=MS.gene38387.t1 |
| chr3.4 | exon | 64299169 | 64299591 | 64299169 | ID=MS.gene38387.t1.exon5;Parent=MS.gene38387.t1 |
| chr3.4 | CDS | 64299169 | 64299591 | 64299169 | ID=cds.MS.gene38387.t1;Parent=MS.gene38387.t1 |
| chr3.4 | exon | 64298962 | 64299011 | 64298962 | ID=MS.gene38387.t1.exon6;Parent=MS.gene38387.t1 |
| chr3.4 | CDS | 64298962 | 64299011 | 64298962 | ID=cds.MS.gene38387.t1;Parent=MS.gene38387.t1 |
| chr3.4 | exon | 64298288 | 64298401 | 64298288 | ID=MS.gene38387.t1.exon7;Parent=MS.gene38387.t1 |
| chr3.4 | CDS | 64298288 | 64298401 | 64298288 | ID=cds.MS.gene38387.t1;Parent=MS.gene38387.t1 |
| chr3.4 | exon | 64298112 | 64298179 | 64298112 | ID=MS.gene38387.t1.exon8;Parent=MS.gene38387.t1 |
| chr3.4 | CDS | 64298112 | 64298179 | 64298112 | ID=cds.MS.gene38387.t1;Parent=MS.gene38387.t1 |
| chr3.4 | exon | 64297158 | 64297897 | 64297158 | ID=MS.gene38387.t1.exon9;Parent=MS.gene38387.t1 |
| chr3.4 | CDS | 64297158 | 64297897 | 64297158 | ID=cds.MS.gene38387.t1;Parent=MS.gene38387.t1 |
| Gene Sequence |
| Protein sequence |
