AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38657

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38657.t1 MTR_0450s0040 79.261 352 44 2 1 331 1 344 0.0 562
MS.gene38657.t1 MTR_7g026400 62.241 241 88 1 31 271 14 251 9.25e-99 310
MS.gene38657.t1 MTR_6g088950 70.000 170 39 2 18 176 7 175 2.62e-73 231
MS.gene38657.t1 MTR_3g086100 35.985 264 152 4 6 252 15 278 1.28e-43 162
MS.gene38657.t1 MTR_4g121020 34.276 283 149 4 6 265 33 301 1.55e-43 164
MS.gene38657.t1 MTR_4g121020 34.276 283 149 4 6 265 33 301 1.64e-43 164
MS.gene38657.t1 MTR_7g117705 35.985 264 147 5 8 255 9 266 2.37e-43 160
MS.gene38657.t1 MTR_2g034960 34.231 260 138 3 6 247 31 275 3.87e-43 162
MS.gene38657.t1 MTR_1g013170 36.929 241 139 1 8 235 9 249 1.72e-42 158
MS.gene38657.t1 MTR_0054s0010 70.492 122 33 2 66 185 1 121 1.90e-42 149
MS.gene38657.t1 MTR_1g032570 34.686 271 155 6 6 255 13 282 7.58e-42 158
MS.gene38657.t1 MTR_8g079940 35.115 262 155 5 6 252 27 288 1.09e-40 154
MS.gene38657.t1 MTR_3g106220 35.918 245 140 3 8 235 12 256 1.76e-40 155
MS.gene38657.t1 MTR_1g013180 37.238 239 137 2 8 233 160 398 1.26e-38 150
MS.gene38657.t1 MTR_4g131600 30.854 363 182 12 6 324 22 359 1.34e-37 146
MS.gene38657.t1 MTR_2g450070 34.783 253 133 4 8 233 22 269 4.96e-37 145
MS.gene38657.t1 MTR_2g450070 34.783 253 133 4 8 233 22 269 7.06e-37 145
MS.gene38657.t1 MTR_4g131580 34.728 239 140 3 8 233 21 256 1.90e-35 140
MS.gene38657.t1 MTR_4g131570 33.891 239 145 2 8 233 21 259 1.95e-35 140
MS.gene38657.t1 MTR_6g045327 33.190 232 138 3 9 239 19 234 4.24e-34 132
MS.gene38657.t1 MTR_6g089050 72.816 103 27 1 85 187 31 132 1.41e-33 125
MS.gene38657.t1 MTR_3g102600 31.034 232 111 1 8 239 12 194 8.01e-33 125
MS.gene38657.t1 MTR_4g021760 30.924 249 155 4 8 254 15 248 1.13e-32 127
MS.gene38657.t1 MTR_3g086100 36.275 204 113 4 66 252 4 207 2.92e-32 129
MS.gene38657.t1 MTR_4g021845 30.942 223 139 4 6 228 12 219 1.62e-31 121
MS.gene38657.t1 MTR_3g102590 32.159 227 110 3 8 231 12 197 2.04e-30 119
MS.gene38657.t1 MTR_1g032570 35.545 211 114 6 66 255 4 213 2.30e-30 124
MS.gene38657.t1 MTR_4g021790 30.263 228 144 4 6 233 12 224 8.77e-30 118
MS.gene38657.t1 MTR_3g102590 31.982 222 107 3 8 226 12 192 3.08e-28 111
MS.gene38657.t1 MTR_3g102600 30.137 219 104 1 8 226 12 181 3.96e-28 111
MS.gene38657.t1 MTR_4g121020 33.333 210 103 4 79 265 2 197 8.58e-28 117
MS.gene38657.t1 MTR_4g021855 28.947 228 147 3 6 233 12 224 5.69e-27 110
MS.gene38657.t1 MTR_3g102600 28.877 187 84 1 53 239 8 145 1.17e-26 106
MS.gene38657.t1 MTR_8g105600 30.279 251 144 6 6 238 11 248 6.94e-23 102
MS.gene38657.t1 MTR_3g102600 27.222 180 82 1 47 226 2 132 1.51e-22 94.0
MS.gene38657.t1 MTR_6g089040 74.545 55 14 0 30 84 2 56 5.92e-21 86.7
MS.gene38657.t1 MTR_4g064730 49.412 85 34 2 174 255 128 206 1.42e-17 84.0
MS.gene38657.t1 MTR_7g089010 54.839 62 28 0 175 236 89 150 5.87e-17 82.0
MS.gene38657.t1 MTR_6g088960 70.000 50 15 0 35 84 27 76 1.67e-16 74.7
MS.gene38657.t1 MTR_1g013160 27.891 147 93 1 66 199 1 147 4.15e-13 67.8
MS.gene38657.t1 MTR_4g023980 25.490 153 100 3 51 203 36 174 1.51e-12 66.6
MS.gene38657.t1 MTR_5g014040 46.667 60 32 0 176 235 310 369 1.51e-11 67.0
MS.gene38657.t1 MTR_4g078810 42.647 68 39 0 176 243 157 224 3.15e-11 65.9
MS.gene38657.t1 MTR_2g090675 43.836 73 40 1 176 247 160 232 5.97e-11 64.7
MS.gene38657.t1 MTR_1g093080 43.243 74 41 1 176 248 210 283 6.70e-11 64.3
MS.gene38657.t1 MTR_4g098870 44.444 63 35 0 176 238 309 371 7.17e-11 65.1
MS.gene38657.t1 MTR_4g098870 44.444 63 35 0 176 238 329 391 7.24e-11 65.1
MS.gene38657.t1 MTR_4g098870 44.444 63 35 0 176 238 309 371 7.70e-11 65.1
MS.gene38657.t1 MTR_4g098870 44.444 63 35 0 176 238 329 391 8.34e-11 64.7
MS.gene38657.t1 MTR_4g098870 44.444 63 35 0 176 238 348 410 8.39e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38657.t1 AT3G16857 32.095 296 157 4 6 263 35 324 9.13e-44 164
MS.gene38657.t1 AT3G16857 32.095 296 157 4 6 263 35 324 1.35e-43 164
MS.gene38657.t1 AT2G01760 37.097 248 136 3 6 233 9 256 9.04e-43 156
MS.gene38657.t1 AT5G07210 36.678 289 134 7 8 253 16 298 1.06e-41 158
MS.gene38657.t1 AT4G31920 34.959 246 156 2 8 253 17 258 4.46e-39 150
MS.gene38657.t1 AT5G07210 35.690 297 134 8 8 253 16 306 4.98e-39 150
MS.gene38657.t1 AT3G16857 31.660 259 133 4 43 263 2 254 1.05e-37 147
MS.gene38657.t1 AT2G01760 33.333 276 136 4 6 233 9 284 8.66e-37 140
MS.gene38657.t1 AT2G25180 37.395 238 138 4 8 235 17 253 1.15e-36 143
MS.gene38657.t1 AT5G58080 34.583 240 144 3 8 237 18 254 3.86e-35 139
MS.gene38657.t1 AT2G27070 35.395 291 138 7 8 253 16 301 4.65e-35 138
MS.gene38657.t1 AT1G67710 35.798 257 145 7 7 244 10 265 2.74e-33 133
MS.gene38657.t1 AT2G01760 37.566 189 98 3 65 233 3 191 1.81e-30 121
MS.gene38657.t1 AT5G49240 32.468 231 144 2 8 226 42 272 1.02e-29 118
MS.gene38657.t1 AT1G49190 31.200 250 148 6 7 236 33 278 2.91e-28 117
MS.gene38657.t1 AT3G62670 30.603 232 145 6 9 229 42 268 6.35e-27 113
MS.gene38657.t1 AT1G67710 35.922 206 112 7 66 252 4 208 2.23e-23 103
MS.gene38657.t1 AT1G67710 35.176 199 109 7 73 252 2 199 3.17e-19 90.5
MS.gene38657.t1 AT3G46640 46.512 86 42 1 174 259 141 222 4.10e-18 85.9
MS.gene38657.t1 AT3G46640 46.512 86 42 1 174 259 141 222 4.10e-18 85.9
MS.gene38657.t1 AT3G46640 46.512 86 42 1 174 259 141 222 4.77e-18 85.5
MS.gene38657.t1 AT5G59570 55.738 61 27 0 176 236 140 200 5.06e-18 85.1
MS.gene38657.t1 AT5G59570 55.738 61 27 0 176 236 140 200 5.06e-18 85.1
MS.gene38657.t1 AT3G10760 43.158 95 46 1 150 236 70 164 6.09e-18 85.5
MS.gene38657.t1 AT2G40970 45.122 82 45 0 175 256 103 184 6.18e-17 80.9
MS.gene38657.t1 AT5G05090 52.381 63 30 0 174 236 78 140 6.50e-17 81.3
MS.gene38657.t1 AT1G49190 26.064 188 115 3 7 187 33 203 1.77e-15 79.7
MS.gene38657.t1 AT5G44190 47.143 70 37 0 174 243 144 213 6.84e-14 73.6
MS.gene38657.t1 AT5G44190 47.143 70 37 0 174 243 144 213 7.58e-14 73.6
MS.gene38657.t1 AT3G04030 44.615 65 32 1 170 230 34 98 2.75e-12 68.9
MS.gene38657.t1 AT5G61380 25.974 154 104 2 4 147 15 168 5.67e-12 68.6
MS.gene38657.t1 AT5G18240 45.455 66 31 2 170 230 34 99 1.77e-11 66.2
MS.gene38657.t1 AT5G18240 45.455 66 31 2 170 230 34 99 1.77e-11 66.2
MS.gene38657.t1 AT5G18240 45.455 66 31 2 170 230 34 99 1.99e-11 66.2
MS.gene38657.t1 AT5G18240 45.455 66 31 2 170 230 34 99 2.01e-11 66.2
MS.gene38657.t1 AT5G18240 45.455 66 31 2 170 230 34 99 2.01e-11 66.2
MS.gene38657.t1 AT2G20570 45.455 66 36 0 176 241 152 217 6.45e-11 64.7

Find 90 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAGTGAGTTTCATATATT+TGG 0.074139 6.3:-55521834 MS.gene38657:CDS
CCATATAGCTTTGGGTTTAA+TGG 0.190557 6.3:-55519641 MS.gene38657:CDS
ACTCATCTTGAATTTGCTTT+TGG 0.194034 6.3:+55521793 None:intergenic
TCGTTCAATCATTTCAATTA+TGG 0.195385 6.3:-55519758 MS.gene38657:CDS
TTAACAAGGAACTTAAAATT+TGG 0.202387 6.3:-55519821 MS.gene38657:CDS
ATTTCATTGATGACAGAAAT+TGG 0.248135 6.3:+55520052 None:intergenic
GAATTTGATATGGATCTTAT+TGG 0.253348 6.3:-55518554 MS.gene38657:CDS
GAATTTGATATGGATCTTAT+TGG 0.253348 6.3:-55518584 MS.gene38657:CDS
GAGTTTCAACTACCTGTTAT+AGG 0.281021 6.3:-55521774 MS.gene38657:intron
CAGATCCAACATGCAAGTTT+TGG 0.289471 6.3:-55523486 MS.gene38657:CDS
AATAATACAGGAATTTGATA+TGG 0.299307 6.3:-55518594 MS.gene38657:intron
AAATGTATCCAGTCATTTAC+AGG 0.301898 6.3:-55520686 MS.gene38657:intron
GTAGAAGCGACATCATAAAA+TGG 0.305371 6.3:+55519908 None:intergenic
TGGAGATCAGGAATTTGATA+TGG 0.318761 6.3:-55518564 MS.gene38657:CDS
CCATTAAACCCAAAGCTATA+TGG 0.320064 6.3:+55519641 None:intergenic
TTAAGAAACCAAGGCTTGTT+TGG 0.322427 6.3:-55521011 MS.gene38657:CDS
GACCAAGATCAAGGGGAGTT+TGG 0.325620 6.3:-55521039 MS.gene38657:CDS
TTTCATATATTTGGAATGAA+TGG 0.333235 6.3:-55521825 MS.gene38657:CDS
CTGAAGTCTTCAGCACAAAA+TGG 0.336425 6.3:+55521207 None:intergenic
ATGTTATTCCATATAGCTTT+GGG 0.337073 6.3:-55519649 MS.gene38657:CDS
CATCTTGATAGAAATTAAAT+AGG 0.356862 6.3:+55519287 None:intergenic
TCAATTATGGTGTGAAGAAC+TGG 0.359272 6.3:-55519745 MS.gene38657:CDS
AATGTTATTCCATATAGCTT+TGG 0.374067 6.3:-55519650 MS.gene38657:CDS
GTAAATGTTTCTGAGAATAG+AGG 0.388331 6.3:-55519617 MS.gene38657:CDS
GGACCATGATGACGAGTCTT+TGG 0.388380 6.3:-55523459 MS.gene38657:CDS
GAATGCTACTTCCGTCAATA+AGG 0.388592 6.3:-55519561 MS.gene38657:CDS
CTGAAGACTTCAGAGACATT+TGG 0.388892 6.3:-55521197 MS.gene38657:CDS
GGAACAGGAACTACGAATAA+AGG 0.399758 6.3:-55519683 MS.gene38657:CDS
CTCCAAACTCCCCTTGATCT+TGG 0.403396 6.3:+55521037 None:intergenic
CAAAGCATGGTGAGCATCCT+TGG 0.404636 6.3:+55521896 None:intergenic
AAATGATATTTACCTATAAC+AGG 0.408467 6.3:+55521762 None:intergenic
TTGTATGCTATTAGACAGAT+TGG 0.429839 6.3:-55520964 MS.gene38657:CDS
TATGGATCTTATTGGAGATC+AGG 0.439612 6.3:-55518576 MS.gene38657:CDS
CAAGGATGCTCACCATGCTT+TGG 0.455806 6.3:-55521895 MS.gene38657:CDS
TGTTGTGCCAAAGAAAATCT+TGG 0.455958 6.3:-55520740 MS.gene38657:CDS
TCTACCAGCTATCCGTCATA+TGG 0.457430 6.3:-55519890 MS.gene38657:CDS
TATAGCAAGTGAAGAAGAAG+AGG 0.457530 6.3:-55521124 MS.gene38657:CDS
AAGTACATCATCTACTGATC+AGG 0.467564 6.3:-55518702 MS.gene38657:CDS
AAGTTCCTTGTTAAGAAACT+TGG 0.468839 6.3:+55519830 None:intergenic
AAGTACATCATCTACTGGTC+AGG 0.478876 6.3:-55518726 MS.gene38657:CDS
CCGTCATATGGAGTTAGAAA+AGG 0.479711 6.3:-55519878 MS.gene38657:CDS
AGATCAACAGAAGTGGGAAC+AGG 0.481464 6.3:-55519698 MS.gene38657:CDS
TACCGACATCATAGTATAGT+TGG 0.481804 6.3:-55519788 MS.gene38657:CDS
TGACGAGTCTTTGGCATCAC+TGG 0.484509 6.3:-55523450 MS.gene38657:CDS
GTTGAAATCAGCCTTATTGA+CGG 0.487701 6.3:+55519550 None:intergenic
TGTGATGATGACCAAGATCA+AGG 0.491694 6.3:-55521048 MS.gene38657:CDS
TTATTAGTCCAAACAAGCCT+TGG 0.494508 6.3:+55521003 None:intergenic
CTGAAAGATGTACAAGAGAA+AGG 0.494563 6.3:-55520130 MS.gene38657:CDS
AATGACATGGAGATTATGTC+TGG 0.501152 6.3:+55521261 None:intergenic
AAGTACATCAGCTACTGGTC+AGG 0.502651 6.3:-55518750 MS.gene38657:CDS
TAGAAGCGACATCATAAAAT+GGG 0.505067 6.3:+55519909 None:intergenic
GCTATTAGACAGATTGGAAT+GGG 0.512204 6.3:-55520958 MS.gene38657:CDS
TGCACAACATTACCTTCTCA+AGG 0.519201 6.3:+55519257 None:intergenic
GTACAAGAGAAAGGAATGGA+AGG 0.530188 6.3:-55520121 MS.gene38657:CDS
TTTAAGTTCAAAATTTGCAT+CGG 0.531556 6.3:-55520080 MS.gene38657:CDS
AGATGTACAAGAGAAAGGAA+TGG 0.533550 6.3:-55520125 MS.gene38657:CDS
TGAATGTTCCAAACCTAACA+AGG 0.533568 6.3:-55520711 MS.gene38657:CDS
CAGGCAAGTACATCAGCTAC+TGG 0.536285 6.3:-55518755 MS.gene38657:CDS
CAGGCAAGTACATCATCTAC+TGG 0.537095 6.3:-55518731 MS.gene38657:CDS
AGACATTTGGAAGTATGCAC+TGG 0.537346 6.3:-55521184 MS.gene38657:CDS
AACTCCATATGACGGATAGC+TGG 0.539302 6.3:+55519886 None:intergenic
AATCAGAACAATGATGCAAG+TGG 0.545489 6.3:-55519325 MS.gene38657:intron
TGGAGTTAGAAAAGGAATGA+TGG 0.547753 6.3:-55519870 MS.gene38657:CDS
TGCTATTAGACAGATTGGAA+TGG 0.548483 6.3:-55520959 MS.gene38657:CDS
ATGCCAAAGACTCGTCATCA+TGG 0.549394 6.3:+55523456 None:intergenic
TAAATGTTTCTGAGAATAGA+GGG 0.551447 6.3:-55519616 MS.gene38657:CDS
GTGATGATGACCAAGATCAA+GGG 0.559984 6.3:-55521047 MS.gene38657:CDS
GCACAACATTACCTTCTCAA+GGG 0.560791 6.3:+55519258 None:intergenic
ATCACTGGCTAATATACTCA+TGG 0.566664 6.3:-55523435 MS.gene38657:CDS
CAAGAATAGATCAACAGAAG+TGG 0.568819 6.3:-55519705 MS.gene38657:CDS
TGTCGCCAAGTTTCTTAACA+AGG 0.569859 6.3:-55519835 MS.gene38657:CDS
CAAGAGAAAGGAATGGAAGG+AGG 0.573386 6.3:-55520118 MS.gene38657:CDS
AAGAATAGATCAACAGAAGT+GGG 0.573718 6.3:-55519704 MS.gene38657:CDS
CACAACCAAAACTTGCATGT+TGG 0.574671 6.3:+55523481 None:intergenic
CACAACATTACCTTCTCAAG+GGG 0.586024 6.3:+55519259 None:intergenic
GATTCATCTGCATAAATCAA+AGG 0.587541 6.3:-55519594 MS.gene38657:CDS
TTGGAGTTGTTAAGAAACCA+AGG 0.591730 6.3:-55521020 MS.gene38657:CDS
AGATGTGCAACCCCTTGAGA+AGG 0.604507 6.3:-55519269 MS.gene38657:intron
CTCGAAGAGTGACCAAAGCA+TGG 0.605583 6.3:+55521883 None:intergenic
TGCTCCATGTTCTAATGACA+TGG 0.612114 6.3:+55521248 None:intergenic
GGTGTGAAGAACTGGAGCGT+TGG 0.621741 6.3:-55519737 MS.gene38657:CDS
TTCCAACTATACTATGATGT+CGG 0.631257 6.3:+55519786 None:intergenic
ATCTCCATGTCATTAGAACA+TGG 0.631773 6.3:-55521252 MS.gene38657:CDS
TGATGATGACCAAGATCAAG+GGG 0.634597 6.3:-55521046 MS.gene38657:CDS
TGGCTAATATACTCATGGCA+TGG 0.635039 6.3:-55523430 MS.gene38657:CDS
GAATGTTCCAAACCTAACAA+GGG 0.643998 6.3:-55520710 MS.gene38657:CDS
TAAGGCTGATTTCAACAATG+AGG 0.645850 6.3:-55519543 MS.gene38657:intron
CAGGAACTACGAATAAAGGA+AGG 0.649263 6.3:-55519679 MS.gene38657:CDS
ATTAGACAGATTGGAATGGG+AGG 0.653232 6.3:-55520955 MS.gene38657:intron
CTCATGGCATGGCAATACAA+AGG 0.657436 6.3:-55523419 MS.gene38657:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACCAAATAAAAAAAATT+AGG + chr6.3:55520104-55520123 None:intergenic 10.0%
!! ATAAAAATAAAATAATTGCA+AGG + chr6.3:55520625-55520644 None:intergenic 10.0%
!!! AATAAATAGTTTATTTTTCT+TGG + chr6.3:55520883-55520902 None:intergenic 10.0%
!!! ACATATATTCTAAAAATATT+TGG + chr6.3:55521828-55521847 None:intergenic 10.0%
!!! ATATTTAACAAAACATTTTA+GGG + chr6.3:55519728-55519747 None:intergenic 10.0%
!!! ATTTTTATAGAAAATTATTG+TGG + chr6.3:55522549-55522568 None:intergenic 10.0%
!!! TATATAAAATGGAAAATTTT+AGG + chr6.3:55521572-55521591 None:intergenic 10.0%
!!! TATATTTAACAAAACATTTT+AGG + chr6.3:55519729-55519748 None:intergenic 10.0%
!! AAAAATGAAAAAATTAGAGT+AGG + chr6.3:55521802-55521821 None:intergenic 15.0%
!! AAAACAAAGTTTAATATCAT+TGG - chr6.3:55519750-55519769 MS.gene38657:CDS 15.0%
!! AAAAGATGTTATTATAGAAA+AGG - chr6.3:55523027-55523046 MS.gene38657:intron 15.0%
!! ATTAACTAAAGTGATATTAA+TGG + chr6.3:55523007-55523026 None:intergenic 15.0%
!! GGATGAAATTTAATAAATAA+GGG - chr6.3:55520462-55520481 MS.gene38657:intron 15.0%
!! GTAACATTGAAAAAAAATTA+TGG + chr6.3:55522674-55522693 None:intergenic 15.0%
!! TGGATGAAATTTAATAAATA+AGG - chr6.3:55520461-55520480 MS.gene38657:intron 15.0%
!! TTATATTTAATTAAGTAGTC+TGG + chr6.3:55519569-55519588 None:intergenic 15.0%
!!! AATAAATAAGGGTATAATAA+TGG - chr6.3:55520473-55520492 MS.gene38657:intron 15.0%
!!! ACTGTTTTAAATAATAAATG+AGG + chr6.3:55521657-55521676 None:intergenic 15.0%
!!! ATGACCTAATTTTTTTTATT+TGG - chr6.3:55520097-55520116 MS.gene38657:CDS 15.0%
!!! ATTAGTCTTCATAAAAAAAA+AGG + chr6.3:55521453-55521472 None:intergenic 15.0%
!!! ATTATGAATAAACTTTTAAC+CGG - chr6.3:55519839-55519858 MS.gene38657:CDS 15.0%
!!! TTTTAACTTAAATTACTGAA+TGG + chr6.3:55520025-55520044 None:intergenic 15.0%
!! AAAGTAATTCAATTATCTGA+TGG + chr6.3:55518667-55518686 None:intergenic 20.0%
!! AAATGATATTTACCTATAAC+AGG + chr6.3:55520279-55520298 None:intergenic 20.0%
!! AATAATACAGGAATTTGATA+TGG - chr6.3:55523444-55523463 MS.gene38657:CDS 20.0%
!! AGATATTCTAAATATTGTTG+AGG - chr6.3:55521489-55521508 MS.gene38657:intron 20.0%
!! ATTAAAATACCACAATTGAA+AGG + chr6.3:55518878-55518897 None:intergenic 20.0%
!! CAAAATAATAAATGTTGCAT+TGG - chr6.3:55520499-55520518 MS.gene38657:intron 20.0%
!! CATCTTGATAGAAATTAAAT+AGG + chr6.3:55522754-55522773 None:intergenic 20.0%
!! GAAGAAATATATAACTCTTA+TGG - chr6.3:55519952-55519971 MS.gene38657:CDS 20.0%
!! GTTATGGTGTATATATAAAA+TGG + chr6.3:55521583-55521602 None:intergenic 20.0%
!! TACCATGTTTATAATAATAC+AGG - chr6.3:55523432-55523451 MS.gene38657:CDS 20.0%
!! TTAACAAGGAACTTAAAATT+TGG - chr6.3:55522217-55522236 MS.gene38657:intron 20.0%
!! TTATATATTTCTTCCTTATC+AGG + chr6.3:55519946-55519965 None:intergenic 20.0%
!! TTATATGTATGAGTGAAAAT+GGG - chr6.3:55519412-55519431 MS.gene38657:intron 20.0%
!! TTCCTGTATTATTATAAACA+TGG + chr6.3:55523437-55523456 None:intergenic 20.0%
!!! AAATCATTCTTTGTTTTTGA+AGG + chr6.3:55519122-55519141 None:intergenic 20.0%
!!! AATCATTCTTTGTTTTTGAA+GGG + chr6.3:55519121-55519140 None:intergenic 20.0%
!!! AGACTAATGAAATTTTTTGA+AGG - chr6.3:55521465-55521484 MS.gene38657:intron 20.0%
!!! ATTAATTGTGTTGATTTCAA+TGG - chr6.3:55520378-55520397 MS.gene38657:intron 20.0%
!!! GGTATGTTAGTTTTTTTTTA+GGG - chr6.3:55519771-55519790 MS.gene38657:CDS 20.0%
!!! GTATGTTAGTTTTTTTTTAG+GGG - chr6.3:55519772-55519791 MS.gene38657:CDS 20.0%
!!! TACAAATACTTTGTTTGTAA+AGG - chr6.3:55519084-55519103 MS.gene38657:intron 20.0%
!!! TGGTATGTTAGTTTTTTTTT+AGG - chr6.3:55519770-55519789 MS.gene38657:CDS 20.0%
!!! TTAGTTAGCTTTCTATATAA+TGG + chr6.3:55521238-55521257 None:intergenic 20.0%
!!! TTTAAGTTCAAAATTTGCAT+CGG - chr6.3:55521958-55521977 MS.gene38657:intron 20.0%
!!! TTTCATATATTTGGAATGAA+TGG - chr6.3:55520213-55520232 MS.gene38657:intron 20.0%
!!! TTTTAAATACTTCTAACAAG+AGG - chr6.3:55523403-55523422 MS.gene38657:intron 20.0%
! AAAAAAAACCTGTAAATGAC+TGG + chr6.3:55521363-55521382 None:intergenic 25.0%
! AAACAGTAGAATACATTGTT+TGG + chr6.3:55518763-55518782 None:intergenic 25.0%
! AACCAATCCTTAAAATAAAG+GGG + chr6.3:55519156-55519175 None:intergenic 25.0%
! AATATTAATGCACACTCAAT+AGG - chr6.3:55519988-55520007 MS.gene38657:CDS 25.0%
! AATGTTATTCCATATAGCTT+TGG - chr6.3:55522388-55522407 MS.gene38657:intron 25.0%
! AGAGTAGGAAAAAATGAAAT+TGG + chr6.3:55521787-55521806 None:intergenic 25.0%
! ATCAGTGAGTTTCATATATT+TGG - chr6.3:55520204-55520223 MS.gene38657:intron 25.0%
! ATCTGAAAGAGAGAAAAAAA+AGG + chr6.3:55521279-55521298 None:intergenic 25.0%
! ATGTTATTCCATATAGCTTT+GGG - chr6.3:55522389-55522408 MS.gene38657:intron 25.0%
! ATTAATTATCAGAAGCCAAA+GGG + chr6.3:55518914-55518933 None:intergenic 25.0%
! CCACTAACTACAATTAATAA+GGG + chr6.3:55520430-55520449 None:intergenic 25.0%
! CTCTAAATTATAGTCGTTTA+AGG - chr6.3:55520330-55520349 MS.gene38657:intron 25.0%
! CTTATATGTATGAGTGAAAA+TGG - chr6.3:55519411-55519430 MS.gene38657:intron 25.0%
! GAACCAATCCTTAAAATAAA+GGG + chr6.3:55519157-55519176 None:intergenic 25.0%
! GAATTTGATATGGATCTTAT+TGG - chr6.3:55523454-55523473 MS.gene38657:CDS 25.0%
! GTATGCAAAGAATATTATGT+TGG - chr6.3:55521677-55521696 MS.gene38657:intron 25.0%
! TAAAGTGATATTAATGGTCA+TGG + chr6.3:55523001-55523020 None:intergenic 25.0%
! TACAAAAATAAACGGATAAC+AGG + chr6.3:55521605-55521624 None:intergenic 25.0%
! TCCACTAACTACAATTAATA+AGG + chr6.3:55520431-55520450 None:intergenic 25.0%
! TCGTTCAATCATTTCAATTA+TGG - chr6.3:55522280-55522299 MS.gene38657:intron 25.0%
! TGAACCAATCCTTAAAATAA+AGG + chr6.3:55519158-55519177 None:intergenic 25.0%
! TGAATCAAATTAACCTGATA+AGG - chr6.3:55519930-55519949 MS.gene38657:CDS 25.0%
!! ATGAAATTGGTAACTGAATT+TGG + chr6.3:55521774-55521793 None:intergenic 25.0%
!! ATTATCTCCAAGATTTTCTT+TGG + chr6.3:55521308-55521327 None:intergenic 25.0%
!! ATTTCATTGATGACAGAAAT+TGG + chr6.3:55521989-55522008 None:intergenic 25.0%
!! CATCACTATTTGAAACAAAA+AGG + chr6.3:55520742-55520761 None:intergenic 25.0%
!! TAAATGTTTCTGAGAATAGA+GGG - chr6.3:55522422-55522441 MS.gene38657:intron 25.0%
!! TTTTCCATTTTAAACTGAGA+AGG - chr6.3:55519495-55519514 MS.gene38657:intron 25.0%
!!! AGAGTATTTTTTAGTTGGAA+GGG + chr6.3:55520304-55520323 None:intergenic 25.0%
!!! TAGAGAGAGTATTTTTTAGT+TGG + chr6.3:55520309-55520328 None:intergenic 25.0%
AAATGTATCCAGTCATTTAC+AGG - chr6.3:55521352-55521371 MS.gene38657:intron 30.0%
AAGAATAGATCAACAGAAGT+GGG - chr6.3:55522334-55522353 MS.gene38657:intron 30.0%
AAGTTCCTTGTTAAGAAACT+TGG + chr6.3:55522211-55522230 None:intergenic 30.0%
AATAAACGGATAACAGGTTA+TGG + chr6.3:55521599-55521618 None:intergenic 30.0%
AATCAAAACGCTAATTAACC+AGG - chr6.3:55523172-55523191 MS.gene38657:intron 30.0%
ACCAATCCTTAAAATAAAGG+GGG + chr6.3:55519155-55519174 None:intergenic 30.0%
AGACAATCAAAAGGGAAAAA+AGG + chr6.3:55519378-55519397 None:intergenic 30.0%
ATTGTTAGATATCAACCCTT+TGG - chr6.3:55518896-55518915 MS.gene38657:intron 30.0%
CCCTTATTAATTGTAGTTAG+TGG - chr6.3:55520427-55520446 MS.gene38657:intron 30.0%
CTGATGGTTAAATAGAAAAG+AGG + chr6.3:55518651-55518670 None:intergenic 30.0%
GATATTAATGGTCATGGATT+CGG + chr6.3:55522995-55523014 None:intergenic 30.0%
GATTAATTATCAGAAGCCAA+AGG + chr6.3:55518915-55518934 None:intergenic 30.0%
GATTCATCTGCATAAATCAA+AGG - chr6.3:55522444-55522463 MS.gene38657:intron 30.0%
TAGAAGCGACATCATAAAAT+GGG + chr6.3:55522132-55522151 None:intergenic 30.0%
TATCTCCGTCTTTATGTAAT+GGG + chr6.3:55523093-55523112 None:intergenic 30.0%
TTATCTCCGTCTTTATGTAA+TGG + chr6.3:55523094-55523113 None:intergenic 30.0%
TTCCAACTATACTATGATGT+CGG + chr6.3:55522255-55522274 None:intergenic 30.0%
TTGTATGCTATTAGACAGAT+TGG - chr6.3:55521074-55521093 MS.gene38657:CDS 30.0%
! AAAGTTTTGCCTTTCAATTG+TGG - chr6.3:55518866-55518885 MS.gene38657:intron 30.0%
! AATTTGCTTTAGCCAAGATT+TGG - chr6.3:55518975-55518994 MS.gene38657:intron 30.0%
! AGAATAAGTTGAGCAAAGTT+AGG + chr6.3:55519887-55519906 None:intergenic 30.0%
! ATCTTGGCTAAAGCAAATTT+TGG + chr6.3:55518974-55518993 None:intergenic 30.0%
! CTTTTGTAAGATAGAATCCA+TGG - chr6.3:55522821-55522840 MS.gene38657:intron 30.0%
! GTAAATGTTTCTGAGAATAG+AGG - chr6.3:55522421-55522440 MS.gene38657:intron 30.0%
! TAATTAAGTAGTCTGGTTTG+TGG + chr6.3:55519562-55519581 None:intergenic 30.0%
! TATTCTCAAACAGGAGTTTT+AGG - chr6.3:55519901-55519920 MS.gene38657:CDS 30.0%
! TTAGCCTTCTCAGTTTAAAA+TGG + chr6.3:55519502-55519521 None:intergenic 30.0%
! TTTTCGCTTGAAAAAGTGAA+AGG + chr6.3:55522045-55522064 None:intergenic 30.0%
!! AAAGTGTTGAGACAATCAAA+AGG + chr6.3:55519387-55519406 None:intergenic 30.0%
!! AAGTGTTGAGACAATCAAAA+GGG + chr6.3:55519386-55519405 None:intergenic 30.0%
!! AATGTTGTGCAAGTCATTTT+AGG - chr6.3:55522793-55522812 MS.gene38657:intron 30.0%
!! ACTCATCTTGAATTTGCTTT+TGG + chr6.3:55520248-55520267 None:intergenic 30.0%
!!! GAGAGTATTTTTTAGTTGGA+AGG + chr6.3:55520305-55520324 None:intergenic 30.0%
!!! GAGTATTTTTTAGTTGGAAG+GGG + chr6.3:55520303-55520322 None:intergenic 30.0%
!!! GCGTTTTGATTAGAACTTAT+TGG + chr6.3:55523163-55523182 None:intergenic 30.0%
!!! GTTAGTTTTTTTTTAGGGGA+GGG - chr6.3:55519776-55519795 MS.gene38657:CDS 30.0%
!!! TGTTAGTTTTTTTTTAGGGG+AGG - chr6.3:55519775-55519794 MS.gene38657:CDS 30.0%
!!! TTAGTTTTTTTTTAGGGGAG+GGG - chr6.3:55519777-55519796 MS.gene38657:CDS 30.0%
AAGTACATCATCTACTGATC+AGG - chr6.3:55523336-55523355 MS.gene38657:intron 35.0%
AATCAGAACAATGATGCAAG+TGG - chr6.3:55522713-55522732 MS.gene38657:intron 35.0%
AATGACATGGAGATTATGTC+TGG + chr6.3:55520780-55520799 None:intergenic 35.0%
AGACAATTATTGTGAGACGT+AGG - chr6.3:55520568-55520587 MS.gene38657:intron 35.0%
AGACACTAGATTCCAAATCT+TGG + chr6.3:55518990-55519009 None:intergenic 35.0%
AGATGTACAAGAGAAAGGAA+TGG - chr6.3:55521913-55521932 MS.gene38657:intron 35.0%
AGATTTGCAATGCATACACA+AGG + chr6.3:55518796-55518815 None:intergenic 35.0%
AGTTAGTGGAGTAGTTAAGT+TGG - chr6.3:55520441-55520460 MS.gene38657:intron 35.0%
ATCTCCATGTCATTAGAACA+TGG - chr6.3:55520786-55520805 MS.gene38657:intron 35.0%
CAAGAATAGATCAACAGAAG+TGG - chr6.3:55522333-55522352 MS.gene38657:intron 35.0%
CCATTAAACCCAAAGCTATA+TGG + chr6.3:55522400-55522419 None:intergenic 35.0%
CTACATTGTAGGATTCTCAA+GGG + chr6.3:55519446-55519465 None:intergenic 35.0%
CTGAAAGATGTACAAGAGAA+AGG - chr6.3:55521908-55521927 MS.gene38657:CDS 35.0%
CTTCACCCATTACATAAAGA+CGG - chr6.3:55523085-55523104 MS.gene38657:intron 35.0%
GAATGTTCCAAACCTAACAA+GGG - chr6.3:55521328-55521347 MS.gene38657:intron 35.0%
GACAATTATTGTGAGACGTA+GGG - chr6.3:55520569-55520588 MS.gene38657:intron 35.0%
GAGTTTCAACTACCTGTTAT+AGG - chr6.3:55520264-55520283 MS.gene38657:intron 35.0%
GCGAAAAACTCTTTCAATGA+TGG - chr6.3:55522058-55522077 MS.gene38657:intron 35.0%
GCTATTAGACAGATTGGAAT+GGG - chr6.3:55521080-55521099 MS.gene38657:CDS 35.0%
GTAGAAGCGACATCATAAAA+TGG + chr6.3:55522133-55522152 None:intergenic 35.0%
TACCGACATCATAGTATAGT+TGG - chr6.3:55522250-55522269 MS.gene38657:intron 35.0%
TACGAGTTTACAAGTCTAGA+AGG - chr6.3:55522864-55522883 MS.gene38657:intron 35.0%
TATAGCAAGTGAAGAAGAAG+AGG - chr6.3:55520914-55520933 MS.gene38657:intron 35.0%
TATGGATCTTATTGGAGATC+AGG - chr6.3:55523462-55523481 MS.gene38657:CDS 35.0%
TCAATTATGGTGTGAAGAAC+TGG - chr6.3:55522293-55522312 MS.gene38657:intron 35.0%
TGAATGTTCCAAACCTAACA+AGG - chr6.3:55521327-55521346 MS.gene38657:intron 35.0%
TGCTATTAGACAGATTGGAA+TGG - chr6.3:55521079-55521098 MS.gene38657:CDS 35.0%
TGCTCAACTTATTCTCAAAC+AGG - chr6.3:55519892-55519911 MS.gene38657:CDS 35.0%
TGGAGATCAGGAATTTGATA+TGG - chr6.3:55523474-55523493 MS.gene38657:CDS 35.0%
TGGAGTTAGAAAAGGAATGA+TGG - chr6.3:55522168-55522187 MS.gene38657:intron 35.0%
TGTTGTGCCAAAGAAAATCT+TGG - chr6.3:55521298-55521317 MS.gene38657:intron 35.0%
TTATTAGTCCAAACAAGCCT+TGG + chr6.3:55521038-55521057 None:intergenic 35.0%
TTGGAGTTGTTAAGAAACCA+AGG - chr6.3:55521018-55521037 MS.gene38657:CDS 35.0%
! ACATTTTCCCTTGTTAGGTT+TGG + chr6.3:55521338-55521357 None:intergenic 35.0%
! ATCACTGGCTAATATACTCA+TGG - chr6.3:55518603-55518622 MS.gene38657:intron 35.0%
! CCTTTTCTAACTCCATATGA+CGG + chr6.3:55522163-55522182 None:intergenic 35.0%
! CTTTTAACCGGACTATACTT+AGG - chr6.3:55519851-55519870 MS.gene38657:CDS 35.0%
! TAAGGCTGATTTCAACAATG+AGG - chr6.3:55522495-55522514 MS.gene38657:intron 35.0%
! TGGATACATTTTCCCTTGTT+AGG + chr6.3:55521343-55521362 None:intergenic 35.0%
! TTAAGAAACCAAGGCTTGTT+TGG - chr6.3:55521027-55521046 MS.gene38657:CDS 35.0%
! TTTTCGCTTGAAAAGGTGAA+AGG + chr6.3:55522108-55522127 None:intergenic 35.0%
!! AATCGTTTTTGTGGTAGACT+CGG - chr6.3:55522912-55522931 MS.gene38657:intron 35.0%
!! AATGGGTTTTTCGCTTGAAA+AGG + chr6.3:55522115-55522134 None:intergenic 35.0%
!! CCATATAGCTTTGGGTTTAA+TGG - chr6.3:55522397-55522416 MS.gene38657:intron 35.0%
!! GAATATTATGTTGGTTCGAG+TGG - chr6.3:55521686-55521705 MS.gene38657:intron 35.0%
!! GTTGAAATCAGCCTTATTGA+CGG + chr6.3:55522491-55522510 None:intergenic 35.0%
!!! ATTTTAAGGATTGGTTCACG+TGG - chr6.3:55519160-55519179 MS.gene38657:intron 35.0%
!!! TAGTTTTTTTTTAGGGGAGG+GGG - chr6.3:55519778-55519797 MS.gene38657:CDS 35.0%
!!! TCCCCCTTTATTTTAAGGAT+TGG - chr6.3:55519151-55519170 MS.gene38657:intron 35.0%
AACTTGATCTGATCTGACCT+AGG + chr6.3:55519469-55519488 None:intergenic 40.0%
AAGTACATCATCTACTGGTC+AGG - chr6.3:55523312-55523331 MS.gene38657:intron 40.0%
AGAATCCTACAATGTAGCCT+AGG - chr6.3:55519449-55519468 MS.gene38657:intron 40.0%
ATTAACCAGGCAACTCTCAT+TGG - chr6.3:55523185-55523204 MS.gene38657:intron 40.0%
ATTAGACAGATTGGAATGGG+AGG - chr6.3:55521083-55521102 MS.gene38657:CDS 40.0%
CACAACATTACCTTCTCAAG+GGG + chr6.3:55522782-55522801 None:intergenic 40.0%
CACAACCAAAACTTGCATGT+TGG + chr6.3:55518560-55518579 None:intergenic 40.0%
CACAATGCCTAAGTATAGTC+CGG + chr6.3:55519861-55519880 None:intergenic 40.0%
CAGGAACTACGAATAAAGGA+AGG - chr6.3:55522359-55522378 MS.gene38657:intron 40.0%
CCGTCATATGGAGTTAGAAA+AGG - chr6.3:55522160-55522179 MS.gene38657:intron 40.0%
CTGAAGACTTCAGAGACATT+TGG - chr6.3:55520841-55520860 MS.gene38657:intron 40.0%
CTGAAGTCTTCAGCACAAAA+TGG + chr6.3:55520834-55520853 None:intergenic 40.0%
GACAAAATCTACTGCTGATC+AGG - chr6.3:55523264-55523283 MS.gene38657:intron 40.0%
GAGTAGATACGAGTCTATGT+GGG + chr6.3:55522942-55522961 None:intergenic 40.0%
GATAATATCGATCCTCAAGC+TGG - chr6.3:55523109-55523128 MS.gene38657:intron 40.0%
GCACAACATTACCTTCTCAA+GGG + chr6.3:55522783-55522802 None:intergenic 40.0%
GCTACATTGTAGGATTCTCA+AGG + chr6.3:55519447-55519466 None:intergenic 40.0%
GGAACAGGAACTACGAATAA+AGG - chr6.3:55522355-55522374 MS.gene38657:intron 40.0%
GTACAAGAGAAAGGAATGGA+AGG - chr6.3:55521917-55521936 MS.gene38657:intron 40.0%
TAATCCAGAATCTAGCTGAG+AGG - chr6.3:55518930-55518949 MS.gene38657:intron 40.0%
TGACACAATTCAAAGACTCG+AGG + chr6.3:55519315-55519334 None:intergenic 40.0%
TGCACAACATTACCTTCTCA+AGG + chr6.3:55522784-55522803 None:intergenic 40.0%
TGCTCCATGTTCTAATGACA+TGG + chr6.3:55520793-55520812 None:intergenic 40.0%
TGGCTAATATACTCATGGCA+TGG - chr6.3:55518608-55518627 MS.gene38657:intron 40.0%
TGTCGCCAAGTTTCTTAACA+AGG - chr6.3:55522203-55522222 MS.gene38657:intron 40.0%
! AGACATTTGGAAGTATGCAC+TGG - chr6.3:55520854-55520873 MS.gene38657:intron 40.0%
! ATTTTCAGTTCGAACTGCCA+AGG - chr6.3:55520125-55520144 MS.gene38657:CDS 40.0%
! CAGATCCAACATGCAAGTTT+TGG - chr6.3:55518552-55518571 MS.gene38657:CDS 40.0%
! GAATGCTACTTCCGTCAATA+AGG - chr6.3:55522477-55522496 MS.gene38657:intron 40.0%
! GTGATGATGACCAAGATCAA+GGG - chr6.3:55520991-55521010 MS.gene38657:CDS 40.0%
! TGATGATGACCAAGATCAAG+GGG - chr6.3:55520992-55521011 MS.gene38657:CDS 40.0%
! TGTGATGATGACCAAGATCA+AGG - chr6.3:55520990-55521009 MS.gene38657:CDS 40.0%
!! CGCACATAGAATCGTTTTTG+TGG - chr6.3:55522903-55522922 MS.gene38657:intron 40.0%
!! TGGTAACTTGTTCAACACAG+AGG + chr6.3:55523143-55523162 None:intergenic 40.0%
!!! AGTTTTTTTTTAGGGGAGGG+GGG - chr6.3:55519779-55519798 MS.gene38657:CDS 40.0%
!!! CAACATGCAAGTTTTGGTTG+TGG - chr6.3:55518558-55518577 MS.gene38657:CDS 40.0%
!!! TGCGATCCCCCTTTATTTTA+AGG - chr6.3:55519146-55519165 MS.gene38657:intron 40.0%
AAGTACATCAGCTACTGGTC+AGG - chr6.3:55523288-55523307 MS.gene38657:intron 45.0%
AGATCAACAGAAGTGGGAAC+AGG - chr6.3:55522340-55522359 MS.gene38657:intron 45.0%
ATGCCAAAGACTCGTCATCA+TGG + chr6.3:55518585-55518604 None:intergenic 45.0%
CAAGAGAAAGGAATGGAAGG+AGG - chr6.3:55521920-55521939 MS.gene38657:intron 45.0%
CAGGCAAGTACATCATCTAC+TGG - chr6.3:55523307-55523326 MS.gene38657:intron 45.0%
CGAGTAGATACGAGTCTATG+TGG + chr6.3:55522943-55522962 None:intergenic 45.0%
CTCATGGCATGGCAATACAA+AGG - chr6.3:55518619-55518638 MS.gene38657:intron 45.0%
TCAACCTCTCAGCTAGATTC+TGG + chr6.3:55518937-55518956 None:intergenic 45.0%
TCTACCAGCTATCCGTCATA+TGG - chr6.3:55522148-55522167 MS.gene38657:intron 45.0%
TCTGACCTAGGCTACATTGT+AGG + chr6.3:55519457-55519476 None:intergenic 45.0%
! TAAGTAGTCTGGTTTGTGGC+AGG + chr6.3:55519558-55519577 None:intergenic 45.0%
!! AACTCCATATGACGGATAGC+TGG + chr6.3:55522155-55522174 None:intergenic 45.0%
!!! AGGATTGGTTCACGTGGTTT+TGG - chr6.3:55519166-55519185 MS.gene38657:intron 45.0%
!!! GTTTTTTTTTAGGGGAGGGG+GGG - chr6.3:55519780-55519799 MS.gene38657:CDS 45.0%
!! ATATATTATACAAAAATAAA+CGG + chr6.3:55521613-55521632 None:intergenic 5.0%
!!! TAAAATATTCAATATTTTAA+TGG - chr6.3:55520040-55520059 MS.gene38657:CDS 5.0%
!!! TTTTTTTTTAAAGTTTATTT+AGG - chr6.3:55519524-55519543 MS.gene38657:intron 5.0%
ACTCGCGAGTTTGACAACCA+TGG + chr6.3:55522841-55522860 None:intergenic 50.0%
AGATGTGCAACCCCTTGAGA+AGG - chr6.3:55522769-55522788 MS.gene38657:intron 50.0%
CAAAGCATGGTGAGCATCCT+TGG + chr6.3:55520145-55520164 None:intergenic 50.0%
CAAGGATGCTCACCATGCTT+TGG - chr6.3:55520143-55520162 MS.gene38657:CDS 50.0%
CAGGCAAGTACATCAGCTAC+TGG - chr6.3:55523283-55523302 MS.gene38657:intron 50.0%
CTCCAAACTCCCCTTGATCT+TGG + chr6.3:55521004-55521023 None:intergenic 50.0%
CTCGAAGAGTGACCAAAGCA+TGG + chr6.3:55520158-55520177 None:intergenic 50.0%
GACAGATTGGAATGGGAGGT+AGG - chr6.3:55521087-55521106 MS.gene38657:CDS 50.0%
GACCAAGATCAAGGGGAGTT+TGG - chr6.3:55520999-55521018 MS.gene38657:CDS 50.0%
GAGGATGAGATTCCAGCTTG+AGG + chr6.3:55523124-55523143 None:intergenic 50.0%
GATGACCAATGAGAGTTGCC+TGG + chr6.3:55523193-55523212 None:intergenic 50.0%
TGACGAGTCTTTGGCATCAC+TGG - chr6.3:55518588-55518607 MS.gene38657:intron 50.0%
! GGACCATGATGACGAGTCTT+TGG - chr6.3:55518579-55518598 MS.gene38657:CDS 50.0%
GGTGTGAAGAACTGGAGCGT+TGG - chr6.3:55522301-55522320 MS.gene38657:intron 55.0%
TCGCATAGACTCGCGAGTCT+AGG - chr6.3:55522960-55522979 MS.gene38657:intron 55.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 55518541 55523519 55518541 ID=MS.gene38657
chr6.3 mRNA 55518541 55523519 55518541 ID=MS.gene38657.t1;Parent=MS.gene38657
chr6.3 exon 55523420 55523519 55523420 ID=MS.gene38657.t1.exon1;Parent=MS.gene38657.t1
chr6.3 CDS 55523420 55523519 55523420 ID=cds.MS.gene38657.t1;Parent=MS.gene38657.t1
chr6.3 exon 55521775 55521927 55521775 ID=MS.gene38657.t1.exon2;Parent=MS.gene38657.t1
chr6.3 CDS 55521775 55521927 55521775 ID=cds.MS.gene38657.t1;Parent=MS.gene38657.t1
chr6.3 exon 55520956 55521303 55520956 ID=MS.gene38657.t1.exon3;Parent=MS.gene38657.t1
chr6.3 CDS 55520956 55521303 55520956 ID=cds.MS.gene38657.t1;Parent=MS.gene38657.t1
chr6.3 exon 55520687 55520763 55520687 ID=MS.gene38657.t1.exon4;Parent=MS.gene38657.t1
chr6.3 CDS 55520687 55520763 55520687 ID=cds.MS.gene38657.t1;Parent=MS.gene38657.t1
chr6.3 exon 55519544 55520167 55519544 ID=MS.gene38657.t1.exon5;Parent=MS.gene38657.t1
chr6.3 CDS 55519544 55520167 55519544 ID=cds.MS.gene38657.t1;Parent=MS.gene38657.t1
chr6.3 exon 55519270 55519341 55519270 ID=MS.gene38657.t1.exon6;Parent=MS.gene38657.t1
chr6.3 CDS 55519270 55519341 55519270 ID=cds.MS.gene38657.t1;Parent=MS.gene38657.t1
chr6.3 exon 55518685 55518774 55518685 ID=MS.gene38657.t1.exon7;Parent=MS.gene38657.t1
chr6.3 CDS 55518685 55518774 55518685 ID=cds.MS.gene38657.t1;Parent=MS.gene38657.t1
chr6.3 exon 55518541 55518606 55518541 ID=MS.gene38657.t1.exon8;Parent=MS.gene38657.t1
chr6.3 CDS 55518541 55518606 55518541 ID=cds.MS.gene38657.t1;Parent=MS.gene38657.t1
Gene Sequence

>MS.gene38657

ATGAGTTACGACAGATCCAACATGCAAGTTTTGGTTGTGGACCATGATGACGAGTCTTTGGCATCACTGGCTAATATACTCATGGCATGGCAATACAAAGGTACGTACCTCTTTTCTATTTAACCATCAGATAATTGAATTACTTTATTTCGATTGCGATTTCATAGATTTTCAATCTTTTCAAATATGTAAAAAGTTTGTTGAAATTAAAAAAAAATTCCAAACAATGTATTCTACTGTTTATCGATCGATCCTTGTGTATGCATTGCAAATCTCTAAAGTTATTCAATTTGCATGTTTTTGAATAACTTTTGTTGTATTAAATAAAGTTTTGCCTTTCAATTGTGGTATTTTAATTGTTAGATATCAACCCTTTGGCTTCTGATAATTAATCCAGAATCTAGCTGAGAGGTTGACAAGTAAAACTTGACCAAAATTTGCTTTAGCCAAGATTTGGAATCTAGTGTCTCGTTTTTAAATTATATTATATGATCTAAATATATTGTACAAATATTTGATTTTTTTTTTTTTTTGTATTTATTGTACAAATACTTTGTTTGTAAAGGAATGACTTTATCCCTTCAAAAACAAAGAATGATTTTATGTGCGATCCCCCTTTATTTTAAGGATTGGTTCACGTGGTTTTGGTATGTTCTTTTAAAGATTAAATATCAAGTAAAAAAAAAAGTACTTGTTTGATCGACATTCATAAAATTAAGTTGTGTATATTTAACAGAGTAGTGTTTTTCATTTTCACTTATTTAGCTACTTCCTCGAGTCTTTGAATTGTGTCAATTTATGTATTTTGTCTTTTTTCTCTCTTTTTAGTGATATCCTTTTTTCCCTTTTGATTGTCTCAACACTTTTTATCTTATATGTATGAGTGAAAATGGGTCAGATCGCCCTTGAGAATCCTACAATGTAGCCTAGGTCAGATCAGATCAAGTTTTTTTTTTTTCCATTTTAAACTGAGAAGGCTAAGTTTTTTTTTTAAAGTTTATTTAGGTAAAATCTCCTGCCACAAACCAGACTACTTAATTAAATATAAATAATATTTTTATTACTATCATTATTATAGTATTAAATATTTACTTTAAATTAAATTATAAATTTATTGACTTGTTCAAGAATTTAAGTCTATTATAAACTAAAATTGAAAATATGACATCATATATATTCAAATTCCCTAAAATGTTTTGTTAAATATAAAAAACAAAGTTTAATATCATTGGTATGTTAGTTTTTTTTTAGGGGAGGGGGGGATTGATCTGTTATGTTGTTAATATATTTAAGCATAAATTATGAATAAACTTTTAACCGGACTATACTTAGGCATTGTGAAGCCTAACTTTGCTCAACTTATTCTCAAACAGGAGTTTTAGGATTAATTGAATCAAATTAACCTGATAAGGAAGAAATATATAACTCTTATGGTATGTTGTCATAAAATATTAATGCACACTCAATAGGAAAACTTGAATCCATTCAGTAATTTAAGTTAAAATATTCAATATTTTAATGGTGACTAACATTCATTTGTACATTACAAAATTTCAATGACCTAATTTTTTTTATTTGGTTTTGATTTTCAGTTCGAACTGCCAAGGATGCTCACCATGCTTTGGTCACTCTTCGAGACTCTCAAGTCTTGTTTGATCTCATAATCAGTGAGTTTCATATATTTGGAATGAATGGATTTCAATTCCAAAAGCAAATTCAAGATGAGTTTCAACTACCTGTTATAGGTAAATATCATTTTCCCCTTCCAACTAAAAAATACTCTCTCTATCTCTAAATTATAGTCGTTTAAGGTTTGTGCATGATTATTAAGAAAATGATTAATTGTGTTGATTTCAATGGTAAAATTAATATCATTTACTAAAATACCCTTATTAATTGTAGTTAGTGGAGTAGTTAAGTTGGATGAAATTTAATAAATAAGGGTATAATAATGGAAACAAAATAATAAATGTTGCATTGGTATTCTAAAGAGACAATTATTTTGAGAAAAAGAAAAAACGCTAAAGAGACAATTATTGTGAGACGTAGGGAGTAAGTCTAATTTTTAGACATGAAATCAACCTTGCAATTATTTTATTTTTATATTTTTATGTTTTGAATACTCTATATTAATATTATATATGCACTTGTTTCACTATAGTATAAGTTATGATATGTTTAAATATTTGACTTTTTCACCTTTTTGTTTCAAATAGTGATGTCTAAAGATAATAGACCAGACATAATCTCCATGTCATTAGAACATGGAGCAGCACAATATATTGTTAAACCATTTTGTGCTGAAGACTTCAGAGACATTTGGAAGTATGCACTGGAAGCCAAGAAAAATAAACTATTTATTGATAGTTTATTTATAGCAAGTGAAGAAGAAGAGGAGACATCAACTGATCAATTACAAACTAAAAAGAATTGTAGTAAAAGAAAGAGTTGTGATGATGACCAAGATCAAGGGGAGTTTGGAGTTGTTAAGAAACCAAGGCTTGTTTGGACTAATAATCTTCACAGTCGATTTTTGTATGCTATTAGACAGATTGGAATGGGAGGTAGGTTATTTTTTTGAAATTCTTTATATATGAATGTATAATAACAATTACATATTCAAAATTTAATATTAATACACACTTTGCATATGTTTCATACTTTTTATACATTCACATTAAGTCTTTATCTCTTCCATTATATAGAAAGCTAACTAACATAAATTTTGTTGTGCTCCTTTTTTTTCTCTCTTTCAGATGTTGTGCCAAAGAAAATCTTGGAGATAATGAATGTTCCAAACCTAACAAGGGAAAATGTATCCAGTCATTTACAGGTTTTTTTTTTCTTCTCAATCTTTATAGTTCATAAGTTTCTTTGAATCTTAATCATATTCTCTATATACATATGCTCCTTTTTTTTTATGAAGACTAATGAAATTTTTTGAAGGTAGATATTCTAAATATTGTTGAGGAATTTAGTTTTGCTTCATGTTAAATTTATTATTCTAAATTTTTTATTTATCTTAAATCCTAAAATTTTCCATTTTATATATACACCATAACCTGTTATCCGTTTATTTTTGTATAATATATAAGTCATCTTCTTAGTCATTGCCTCATTTATTATTTAAAACAGTGTATGCAAAGAATATTATGTTGGTTCGAGTGGAACTAGACTCTGATTGTTTAAGTAGAGTCTCTAAATTTAGTATTGTGATAAGTGTTAGAACGCCAAATTCAGTTACCAATTTCATTTTTTCCTACTCTAATTTTTTCATTTTTCGTCCAAATATTTTTAGAATATATGTCAAGTTTCTAATGCATTAGTATTATGATCATATAAACACTTGTAGAAGCATCGCATGTTTCTGAAAGATGTACAAGAGAAAGGAATGGAAGGAGGAGTTTCTCAGAGAGCTTTAAGTTCAAAATTTGCATCGGATCTTCCAATTTCTGTCATCAATGAAATCATTGAAAGAAGAAAAAACAGTCGATATTCAAACCTTTCACTTTTTCAAGCGAAAAACTCTTTCAATGATGGTGCTTCTACTAGCAATTCATCAAACCTTTCACCTTTTCAAGCGAAAAACCCATTTTATGATGTCGCTTCTACCAGCTATCCGTCATATGGAGTTAGAAAAGGAATGATGGCTTCTTCTTCTTTGTCGCCAAGTTTCTTAACAAGGAACTTAAAATTTGGTGATACTAGTTACCGACATCATAGTATAGTTGGAAATGATTCGTTCAATCATTTCAATTATGGTGTGAAGAACTGGAGCGTTGGATCTACAATCAAGAATAGATCAACAGAAGTGGGAACAGGAACTACGAATAAAGGAAGGTTTGATAATGTTATTCCATATAGCTTTGGGTTTAATGGAGTAAATGTTTCTGAGAATAGAGGGATTCATCTGCATAAATCAAAGGCTGCTGTTGAGAATGCTACTTCCGTCAATAAGGCTGATTTCAACAATGAGGTATGCAAACATGAATCTTTTAAAACAATCCACAATAATTTTCTATAAAAATATTTCAATCGACTAATCATTTGAAACAATTTTTTGATATTTTTTAAAAAAATCTCATTTGTATAATTTTGAAATATATAGACACACACACACTTAATGTGCACCATAATTTTTTTTCAATGTTACTGACATATTTTTTTTCTTGAATCAGAACAATGATGCAAGTGGATTTCTGAATTCTGACCTATTTAATTTCTATCAAGATGTGCAACCCCTTGAGAAGGTAATGTTGTGCAAGTCATTTTAGGCGTAACTTTTGTAAGATAGAATCCATGGTTGTCAAACTCGCGAGTCTATACGAGTTTACAAGTCTAGAAGGCAAGAACAAGTAGACTCGCACATAGAATCGTTTTTGTGGTAGACTCGGTAGACCCACATAGACTCGTATCTACTCGCATAGACTCGCGAGTCTAGGACGAGTTTACCGAATCCATGACCATTAATATCACTTTAGTTAATAAAAGATGTTATTATAGAAAAGGAATTTTATCAAAAATATTTGATCTAAATTTGTTCACTTCACCCATTACATAAAGACGGAGATAATATCGATCCTCAAGCTGGAATCTCATCCTCTGTGTTGAACAAGTTACCAATAAGTTCTAATCAAAACGCTAATTAACCAGGCAACTCTCATTGGTCATCATACTCTTTAGTTAAATCACATTATTATTTTGTTTTCTTTTTCAAATGATTGACAAAATCTACTGCTGATCAGGCAAGTACATCAGCTACTGGTCAGGCAAGTACATCATCTACTGGTCAGGCAAGTACATCATCTACTGATCAGGCAAGTAAACTTGTTAAAGTAAATGTTTGTTTATTGCAATTAATTTTTTAAATACTTCTAACAAGAGGCTATTTTACCATGTTTATAATAATACAGGAATTTGATATGGATCTTATTGGAGATCAGGAATTTGATATGGATCTTATTGGAGAATTGTTTTGA
Protein sequence

>MS.gene38657.t1

MSYDRSNMQVLVVDHDDESLASLANILMAWQYKVRTAKDAHHALVTLRDSQVLFDLIISEFHIFGMNGFQFQKQIQDEFQLPVIVMSKDNRPDIISMSLEHGAAQYIVKPFCAEDFRDIWKYALEAKKNKLFIDSLFIASEEEEETSTDQLQTKKNCSKRKSCDDDQDQGEFGVVKKPRLVWTNNLHSRFLYAIRQIGMGDVVPKKILEIMNVPNLTRENVSSHLQKHRMFLKDVQEKGMEGGVSQRALSSKFASDLPISVINEIIERRKNSRYSNLSLFQAKNSFNDGASTSNSSNLSPFQAKNPFYDVASTSYPSYGVRKGMMASSSLSPSFLTRNLKFGDTSYRHHSIVGNDSFNHFNYGVKNWSVGSTIKNRSTEVGTGTTNKGRFDNVIPYSFGFNGVNVSENRGIHLHKSKAAVENATSVNKADFNNENNDASGFLNSDLFNFYQDVQPLEKASTSATGQASTSSTGQASTSSTDQASKLVKEFDMDLIGDQEFDMDLIGELF