Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38968.t1 | KEH19503.1 | 96.8 | 685 | 21 | 1 | 1 | 684 | 1 | 685 | 0.00E+00 | 1354.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38968.t1 | Q56XZ1 | 47.8 | 678 | 297 | 12 | 10 | 682 | 10 | 635 | 4.5e-166 | 586.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38968.t1 | A0A072TRN9 | 96.8 | 685 | 21 | 1 | 1 | 684 | 1 | 685 | 0.0e+00 | 1354.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene38968.t1 | TF | STAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38968.t1 | MTR_8g461480 | 96.788 | 685 | 21 | 1 | 1 | 684 | 1 | 685 | 0.0 | 1373 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38968.t1 | AT1G78540 | 47.307 | 687 | 305 | 12 | 1 | 682 | 1 | 635 | 0.0 | 590 |
| MS.gene38968.t1 | AT1G78540 | 47.307 | 687 | 305 | 12 | 1 | 682 | 1 | 635 | 0.0 | 589 |
| MS.gene38968.t1 | AT1G78540 | 47.307 | 687 | 305 | 12 | 1 | 682 | 1 | 635 | 0.0 | 589 |
| MS.gene38968.t1 | AT1G17040 | 46.657 | 688 | 281 | 10 | 1 | 682 | 1 | 608 | 0.0 | 588 |
| MS.gene38968.t1 | AT1G17040 | 46.657 | 688 | 281 | 10 | 1 | 682 | 1 | 608 | 0.0 | 587 |
| MS.gene38968.t1 | AT1G17040 | 46.132 | 698 | 280 | 11 | 1 | 682 | 1 | 618 | 0.0 | 580 |
Find 173 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACTTTCTCTTTCTGCTTT+TGG | 0.137670 | 8.4:+49196209 | MS.gene38968:CDS |
| AAAGGATAATCTCCTAATTT+TGG | 0.151104 | 8.4:-49201329 | None:intergenic |
| ATCTCTTGGAAATTAATATT+TGG | 0.178295 | 8.4:-49206515 | None:intergenic |
| TATCAAAGATCATCATTTAA+AGG | 0.184938 | 8.4:+49198670 | MS.gene38968:CDS |
| TATATTCGGCTTCACATTAA+TGG | 0.190807 | 8.4:+49198494 | MS.gene38968:CDS |
| TTCTACACCAGATTGCTTTA+TGG | 0.200489 | 8.4:-49201594 | None:intergenic |
| ATGTGAAGCCGAATATAATT+TGG | 0.226222 | 8.4:-49198488 | None:intergenic |
| TTCCTTCAAATTACTTGAAT+TGG | 0.227549 | 8.4:-49198564 | None:intergenic |
| ATGAATCCTTCAATCCATTT+AGG | 0.246881 | 8.4:-49207474 | None:intergenic |
| CAAGGAATGGGGTGGTTGTT+TGG | 0.283394 | 8.4:-49206576 | None:intergenic |
| CTTTCAATGGATCATATATA+CGG | 0.288269 | 8.4:+49207660 | MS.gene38968:CDS |
| GGAATTCCATGTCACCTAAA+TGG | 0.294593 | 8.4:+49207460 | MS.gene38968:CDS |
| AACGAGAAAAGGAGCACTTT+TGG | 0.301402 | 8.4:-49197630 | None:intergenic |
| ATATTCGGCTTCACATTAAT+GGG | 0.313116 | 8.4:+49198495 | MS.gene38968:CDS |
| ACAATTAGGCAACCGGCATC+TGG | 0.320701 | 8.4:-49207597 | None:intergenic |
| GATGGTGTTTGGGGCATTGT+TGG | 0.327498 | 8.4:+49198892 | MS.gene38968:CDS |
| AGGTTTGTCCAAATTATATT+CGG | 0.332939 | 8.4:+49198480 | MS.gene38968:intron |
| GTGGGGCCAGCTTCTTGAGG+TGG | 0.338393 | 8.4:-49207574 | None:intergenic |
| TAGAAGATGGAACTAATCTT+TGG | 0.341777 | 8.4:+49206541 | MS.gene38968:CDS |
| TGCCTAATTGTTACATATGT+TGG | 0.346266 | 8.4:+49207609 | MS.gene38968:CDS |
| CTACTTTCCATGCTATTTGA+AGG | 0.360932 | 8.4:-49203797 | None:intergenic |
| CTGTTACTTGCATGGGTCCT+TGG | 0.362933 | 8.4:+49197711 | MS.gene38968:CDS |
| TCAGGTATGGACTGCTAATC+AGG | 0.366593 | 8.4:+49201628 | MS.gene38968:CDS |
| TCCCAACATATGTAACAATT+AGG | 0.370251 | 8.4:-49207611 | None:intergenic |
| CCCTACCACCATTCTTCATC+AGG | 0.370260 | 8.4:+49196258 | MS.gene38968:CDS |
| TAAGCTGAAGGATTTATGTT+TGG | 0.371386 | 8.4:+49196168 | MS.gene38968:CDS |
| TGCCAGACAGTATTTGAAAA+TGG | 0.371618 | 8.4:-49203843 | None:intergenic |
| CACATTAATGGGGAGATTGT+AGG | 0.372402 | 8.4:+49198506 | MS.gene38968:CDS |
| AGAAGAAAGTGATGGTGTTT+GGG | 0.375693 | 8.4:+49198882 | MS.gene38968:CDS |
| GCCTAATTGTTACATATGTT+GGG | 0.381610 | 8.4:+49207610 | MS.gene38968:CDS |
| CATCATCAATTGCTGAAGAT+TGG | 0.385115 | 8.4:-49201463 | None:intergenic |
| CAAGGACCCATGCAAGTAAC+AGG | 0.387372 | 8.4:-49197710 | None:intergenic |
| AAGAAGAAAGTGATGGTGTT+TGG | 0.389600 | 8.4:+49198881 | MS.gene38968:CDS |
| GGGACTGGGTAAATGCTATC+TGG | 0.392153 | 8.4:+49207439 | MS.gene38968:CDS |
| CTTCTTCAAAGTTAAGATAT+CGG | 0.394613 | 8.4:-49203724 | None:intergenic |
| TCCATCTTCTATCAATCTCT+TGG | 0.394660 | 8.4:-49206529 | None:intergenic |
| CAAATACTGTCTGGCAGGCT+TGG | 0.395074 | 8.4:+49203850 | MS.gene38968:CDS |
| TCCAAGAGATTGATAGAAGA+TGG | 0.402990 | 8.4:+49206528 | MS.gene38968:CDS |
| TAGAGAACTTTGAGAAGTTA+TGG | 0.403203 | 8.4:+49207382 | MS.gene38968:CDS |
| TAATTTGAAGGAAATACATT+TGG | 0.404039 | 8.4:+49198574 | MS.gene38968:CDS |
| TGGGGCCAGCTTCTTGAGGT+GGG | 0.411262 | 8.4:-49207573 | None:intergenic |
| ATTTGGACAGCCTGTTGATA+TGG | 0.412767 | 8.4:+49199459 | MS.gene38968:CDS |
| GAGATTCTAAGAAGCATTGC+GGG | 0.414323 | 8.4:+49207339 | MS.gene38968:CDS |
| TCGCCACAAACTACTTTCAA+TGG | 0.414819 | 8.4:+49207647 | MS.gene38968:CDS |
| ACCTCATTCTCCATATCAAC+AGG | 0.425279 | 8.4:-49199469 | None:intergenic |
| TCATGAAGATTGCTTCTTGT+GGG | 0.429431 | 8.4:+49206631 | MS.gene38968:CDS |
| CAAACAACCACCCCATTCCT+TGG | 0.429564 | 8.4:+49206577 | MS.gene38968:CDS |
| GTCCGATTCGATGCATCTCC+AGG | 0.430659 | 8.4:+49201369 | MS.gene38968:CDS |
| GTCAAGATCTCTCTCTCATC+AGG | 0.431837 | 8.4:+49206653 | MS.gene38968:CDS |
| ATATAAAATTAGGTTGAGAA+TGG | 0.431848 | 8.4:+49203680 | MS.gene38968:intron |
| TTCCATCATAGCTAGACAAA+AGG | 0.435470 | 8.4:-49199661 | None:intergenic |
| ACTGTCTTCCTTGTTACATA+AGG | 0.436339 | 8.4:+49198538 | MS.gene38968:CDS |
| ACTGCGCTCTTCCAAGGAAT+GGG | 0.437559 | 8.4:-49206588 | None:intergenic |
| ATCATCAATTGCTGAAGATT+GGG | 0.438766 | 8.4:-49201462 | None:intergenic |
| CAAGATATCTGTATCAGTTA+AGG | 0.438887 | 8.4:+49201562 | MS.gene38968:CDS |
| AGATTGCTTTATGGTGGGGT+TGG | 0.440842 | 8.4:-49201585 | None:intergenic |
| ATACATTTGGCCAATCTTTG+TGG | 0.443552 | 8.4:+49198587 | MS.gene38968:CDS |
| AGCAATTGATGATGTGTCAT+TGG | 0.443673 | 8.4:+49201472 | MS.gene38968:CDS |
| GGTGTTTGGGGCATTGTTGG+TGG | 0.445924 | 8.4:+49198895 | MS.gene38968:CDS |
| AGACAAAGAAATTTCAGAGT+TGG | 0.446109 | 8.4:+49203916 | MS.gene38968:CDS |
| TGAAGCTTCTGCCTCCTCCT+TGG | 0.447893 | 8.4:-49207499 | None:intergenic |
| TATAAAATTAGGTTGAGAAT+GGG | 0.447911 | 8.4:+49203681 | MS.gene38968:intron |
| ACTACTGTCTCCACAAAGAT+TGG | 0.452536 | 8.4:-49198597 | None:intergenic |
| CTGTAGCGTGTGTAATATCC+AGG | 0.453605 | 8.4:+49207418 | MS.gene38968:CDS |
| GAGGCAGAAGCTTCACTTCA+AGG | 0.453781 | 8.4:+49207507 | MS.gene38968:CDS |
| GGGGCCAGCTTCTTGAGGTG+GGG | 0.454316 | 8.4:-49207572 | None:intergenic |
| TCATTGGAAAGTATGAATTC+TGG | 0.460888 | 8.4:+49201488 | MS.gene38968:CDS |
| CTGGATATTACACACGCTAC+AGG | 0.462387 | 8.4:-49207417 | None:intergenic |
| ATCCAATTCAAGTAATTTGA+AGG | 0.462536 | 8.4:+49198562 | MS.gene38968:CDS |
| AAACCTCTTCATCAGTGGAT+TGG | 0.463347 | 8.4:-49201525 | None:intergenic |
| TGGAGACAGTAGTGGTGTGC+AGG | 0.464205 | 8.4:+49198607 | MS.gene38968:CDS |
| ACACCAGATTGCTTTATGGT+GGG | 0.468327 | 8.4:-49201590 | None:intergenic |
| CACCAGATTGCTTTATGGTG+GGG | 0.468862 | 8.4:-49201589 | None:intergenic |
| CACTGCGCTCTTCCAAGGAA+TGG | 0.469423 | 8.4:-49206589 | None:intergenic |
| TTGGAAGAGCGCAGTGTATG+AGG | 0.470136 | 8.4:+49206596 | MS.gene38968:CDS |
| ATATGTAACAATTAGGCAAC+CGG | 0.470781 | 8.4:-49207604 | None:intergenic |
| TCCATCATAGCTAGACAAAA+GGG | 0.472581 | 8.4:-49199660 | None:intergenic |
| AAGTAGAAGATATCAAATAT+CGG | 0.473248 | 8.4:+49203814 | MS.gene38968:CDS |
| TAGGCAACCGGCATCTGGGT+GGG | 0.474931 | 8.4:-49207592 | None:intergenic |
| AGCTGGCCCCACCCAGATGC+CGG | 0.477204 | 8.4:+49207585 | MS.gene38968:CDS |
| ATGTCACCTAAATGGATTGA+AGG | 0.477650 | 8.4:+49207468 | MS.gene38968:CDS |
| TTCTTCTTCAACCTCAGAGA+TGG | 0.482819 | 8.4:-49198866 | None:intergenic |
| AATGTAATAATTCTCAGGTA+TGG | 0.487091 | 8.4:+49201615 | MS.gene38968:CDS |
| GCCTGTTGATATGGAGAATG+AGG | 0.491700 | 8.4:+49199468 | MS.gene38968:CDS |
| TTCACTTGTGTATGCTGACA+CGG | 0.492848 | 8.4:+49199601 | MS.gene38968:CDS |
| TCTTCATGTAAGTAAAGAAC+TGG | 0.493153 | 8.4:-49197683 | None:intergenic |
| TTCTTTGTCTGAAGCAGAGA+TGG | 0.494049 | 8.4:-49203903 | None:intergenic |
| GATCCATTGAAAGTAGTTTG+TGG | 0.495131 | 8.4:-49207650 | None:intergenic |
| ATGATCTTTGATAGAAGAAA+CGG | 0.496562 | 8.4:-49198660 | None:intergenic |
| AGGCAACCGGCATCTGGGTG+GGG | 0.497592 | 8.4:-49207591 | None:intergenic |
| CGTGTGTAATATCCAGGGAC+TGG | 0.499294 | 8.4:+49207424 | MS.gene38968:CDS |
| TTCAATCCATTTAGGTGACA+TGG | 0.504658 | 8.4:-49207466 | None:intergenic |
| GAAGCTTCACTTCAAGGTCC+AGG | 0.505329 | 8.4:+49207513 | MS.gene38968:CDS |
| AACCCCACCATAAAGCAATC+TGG | 0.505462 | 8.4:+49201587 | MS.gene38968:CDS |
| TGTAGAATGTAATAATTCTC+AGG | 0.506583 | 8.4:+49201610 | MS.gene38968:CDS |
| TTCATGAAGATTGCTTCTTG+TGG | 0.506672 | 8.4:+49206630 | MS.gene38968:CDS |
| TGGCACAGGCATCTTGTCGC+AGG | 0.510165 | 8.4:+49199404 | MS.gene38968:intron |
| TTATTGTTGATAACGAGAAA+AGG | 0.512110 | 8.4:-49197641 | None:intergenic |
| CTGAATCATCAGAGAGTACA+GGG | 0.512336 | 8.4:+49203762 | MS.gene38968:CDS |
| TGGGTGGGGCCAGCTTCTTG+AGG | 0.513111 | 8.4:-49207577 | None:intergenic |
| TACACCAGATTGCTTTATGG+TGG | 0.513234 | 8.4:-49201591 | None:intergenic |
| GAAGCTCCTGTTACTTGCAT+GGG | 0.514189 | 8.4:+49197704 | MS.gene38968:CDS |
| TCATCAGTTGTATTCTCGAC+TGG | 0.514337 | 8.4:-49199629 | None:intergenic |
| GTCGTGCATCATTTAAGCTC+AGG | 0.517134 | 8.4:+49199726 | MS.gene38968:CDS |
| ATGGATCATATATACGGGTA+AGG | 0.517409 | 8.4:+49207666 | MS.gene38968:CDS |
| GGTTCCCCACCTCAAGAAGC+TGG | 0.518481 | 8.4:+49207568 | MS.gene38968:CDS |
| AGATGGAACTAATCTTTGGC+TGG | 0.521756 | 8.4:+49206545 | MS.gene38968:CDS |
| ATTTAAGCTCAGGATATCTC+AGG | 0.523956 | 8.4:+49199736 | MS.gene38968:CDS |
| CAAAATTATCCACGCTGGTG+TGG | 0.527759 | 8.4:+49201402 | MS.gene38968:CDS |
| CCACGTTCTTGAAATCCTCC+TGG | 0.528277 | 8.4:-49207531 | None:intergenic |
| TCATACACTGCGCTCTTCCA+AGG | 0.536339 | 8.4:-49206594 | None:intergenic |
| AAACCAATCCACTGATGAAG+AGG | 0.537018 | 8.4:+49201522 | MS.gene38968:CDS |
| TTTCATCCAAGTGTGATAGC+AGG | 0.537892 | 8.4:+49201282 | MS.gene38968:CDS |
| TCTGAATCATCAGAGAGTAC+AGG | 0.539016 | 8.4:+49203761 | MS.gene38968:CDS |
| CAATTAGGCAACCGGCATCT+GGG | 0.539070 | 8.4:-49207596 | None:intergenic |
| CTCCTGGAGATGCATCGAAT+CGG | 0.542203 | 8.4:-49201371 | None:intergenic |
| ACTTTGAGAAGTTATGGTGC+TGG | 0.543644 | 8.4:+49207388 | MS.gene38968:CDS |
| GGTTACGTGCACAATTATGA+AGG | 0.543693 | 8.4:+49198629 | MS.gene38968:CDS |
| CGGGTGTTTGTCTGAAGGAA+AGG | 0.544681 | 8.4:-49201347 | None:intergenic |
| CTTTGATAGAAGAAACGGTA+TGG | 0.546372 | 8.4:-49198655 | None:intergenic |
| AGAAGCTCCTGTTACTTGCA+TGG | 0.548585 | 8.4:+49197703 | MS.gene38968:CDS |
| AAGAATGGTGGTAGGGAATG+TGG | 0.550704 | 8.4:-49196251 | None:intergenic |
| CCTGATGAAGAATGGTGGTA+GGG | 0.551662 | 8.4:-49196258 | None:intergenic |
| GATAGCATTTACCCAGTCCC+TGG | 0.552763 | 8.4:-49207436 | None:intergenic |
| TTTCAGGATGTTCCCACCAC+GGG | 0.556259 | 8.4:+49203957 | MS.gene38968:CDS |
| TCACTTGTGTATGCTGACAC+GGG | 0.556831 | 8.4:+49199602 | MS.gene38968:CDS |
| ATGATTAACCTGATGAAGAA+TGG | 0.560257 | 8.4:-49196266 | None:intergenic |
| GAACAACCTGCTATCACACT+TGG | 0.566917 | 8.4:-49201288 | None:intergenic |
| AAATTCACCTTCAAATAGCA+TGG | 0.570364 | 8.4:+49203790 | MS.gene38968:CDS |
| AGGATTCATCACCAAGGAGG+AGG | 0.573700 | 8.4:+49207488 | MS.gene38968:CDS |
| TTTCAATGGATCATATATAC+GGG | 0.575038 | 8.4:+49207661 | MS.gene38968:CDS |
| GTACTCTCTGATGATTCAGA+TGG | 0.580613 | 8.4:-49203758 | None:intergenic |
| CGCTCTTCCAAGGAATGGGG+TGG | 0.581585 | 8.4:-49206584 | None:intergenic |
| GTGTGTAATATCCAGGGACT+GGG | 0.582085 | 8.4:+49207425 | MS.gene38968:CDS |
| TCATCTATTGATAACTTCAG+AGG | 0.582464 | 8.4:-49198838 | None:intergenic |
| TTAGGCAACCGGCATCTGGG+TGG | 0.584004 | 8.4:-49207593 | None:intergenic |
| TGGAGATGCATCGAATCGGA+CGG | 0.584719 | 8.4:-49201367 | None:intergenic |
| TCTATTGATAACTTCAGAGG+AGG | 0.585690 | 8.4:-49198835 | None:intergenic |
| ACCTGATGAAGAATGGTGGT+AGG | 0.586031 | 8.4:-49196259 | None:intergenic |
| CTGATGAAGAGGTTTAGAGT+TGG | 0.586232 | 8.4:+49201533 | MS.gene38968:CDS |
| GGAGATGCATCGAATCGGAC+GGG | 0.587647 | 8.4:-49201366 | None:intergenic |
| CACTTGTGTATGCTGACACG+GGG | 0.600002 | 8.4:+49199603 | MS.gene38968:CDS |
| TTGGAACACAAAATCTGATG+AGG | 0.600332 | 8.4:-49201310 | None:intergenic |
| TCGGACGGGTGTTTGTCTGA+AGG | 0.602563 | 8.4:-49201352 | None:intergenic |
| TGGATATTACACACGCTACA+GGG | 0.607476 | 8.4:-49207416 | None:intergenic |
| ACTCTAAACCTCTTCATCAG+TGG | 0.608089 | 8.4:-49201530 | None:intergenic |
| CAATGCTTCTTAGAATCTCA+AGG | 0.610813 | 8.4:-49207335 | None:intergenic |
| CTATTGATAACTTCAGAGGA+GGG | 0.614350 | 8.4:-49198834 | None:intergenic |
| ACATGTGGAACTTCTGTCCA+AGG | 0.615922 | 8.4:-49197728 | None:intergenic |
| ATTGGATTCCTTATGTAACA+AGG | 0.618656 | 8.4:-49198546 | None:intergenic |
| TATTCGGCTTCACATTAATG+GGG | 0.619662 | 8.4:+49198496 | MS.gene38968:CDS |
| CGAAGGGTACTGTAAGCTGA+AGG | 0.622135 | 8.4:+49196156 | MS.gene38968:CDS |
| ATGGGTTCATGTTGGATGTG+AGG | 0.626398 | 8.4:+49197781 | MS.gene38968:CDS |
| TCAAAATCAACAGTAACATG+TGG | 0.626757 | 8.4:-49197743 | None:intergenic |
| GATGAAATGAGAAGAAACGA+AGG | 0.636052 | 8.4:+49196139 | MS.gene38968:CDS |
| TGAGATTCTAAGAAGCATTG+CGG | 0.636449 | 8.4:+49207338 | MS.gene38968:CDS |
| AATCTTTGTGGAGACAGTAG+TGG | 0.646760 | 8.4:+49198599 | MS.gene38968:CDS |
| CCAGGAGGATTTCAAGAACG+TGG | 0.650281 | 8.4:+49207531 | MS.gene38968:CDS |
| CTGCGCTCTTCCAAGGAATG+GGG | 0.656673 | 8.4:-49206587 | None:intergenic |
| ATGAAATGAGAAGAAACGAA+GGG | 0.660758 | 8.4:+49196140 | MS.gene38968:CDS |
| GGAGACAGTAGTGGTGTGCA+GGG | 0.672818 | 8.4:+49198608 | MS.gene38968:CDS |
| GAAGAAAGTGATGGTGTTTG+GGG | 0.673785 | 8.4:+49198883 | MS.gene38968:CDS |
| CCATCATAGCTAGACAAAAG+GGG | 0.681924 | 8.4:-49199659 | None:intergenic |
| TGTAGCGTGTGTAATATCCA+GGG | 0.688612 | 8.4:+49207419 | MS.gene38968:CDS |
| GAGGTTGAAGAAGAAAGTGA+TGG | 0.690505 | 8.4:+49198874 | MS.gene38968:CDS |
| TAACACAAAATTATCCACGC+TGG | 0.694520 | 8.4:+49201397 | MS.gene38968:CDS |
| AGATGAATCATCCATCTCTG+AGG | 0.696752 | 8.4:+49198855 | MS.gene38968:CDS |
| GCTTCACTTCAAGGTCCAGG+AGG | 0.697928 | 8.4:+49207516 | MS.gene38968:CDS |
| ACTTGTGTATGCTGACACGG+GGG | 0.701144 | 8.4:+49199604 | MS.gene38968:CDS |
| TGAAGGATTCATCACCAAGG+AGG | 0.729057 | 8.4:+49207485 | MS.gene38968:CDS |
| ATTAACCTGATGAAGAATGG+TGG | 0.731909 | 8.4:-49196263 | None:intergenic |
| GATTGAAGGATTCATCACCA+AGG | 0.751713 | 8.4:+49207482 | MS.gene38968:CDS |
| TGAATCATCAGAGAGTACAG+GGG | 0.779447 | 8.4:+49203763 | MS.gene38968:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 49196130 | 49207686 | 49196130 | ID=MS.gene38968 |
| chr8.4 | mRNA | 49196130 | 49207686 | 49196130 | ID=MS.gene38968.t1;Parent=MS.gene38968 |
| chr8.4 | exon | 49196130 | 49196279 | 49196130 | ID=MS.gene38968.t1.exon1;Parent=MS.gene38968.t1 |
| chr8.4 | CDS | 49196130 | 49196279 | 49196130 | ID=cds.MS.gene38968.t1;Parent=MS.gene38968.t1 |
| chr8.4 | exon | 49197614 | 49197802 | 49197614 | ID=MS.gene38968.t1.exon2;Parent=MS.gene38968.t1 |
| chr8.4 | CDS | 49197614 | 49197802 | 49197614 | ID=cds.MS.gene38968.t1;Parent=MS.gene38968.t1 |
| chr8.4 | exon | 49198482 | 49198691 | 49198482 | ID=MS.gene38968.t1.exon3;Parent=MS.gene38968.t1 |
| chr8.4 | CDS | 49198482 | 49198691 | 49198482 | ID=cds.MS.gene38968.t1;Parent=MS.gene38968.t1 |
| chr8.4 | exon | 49198832 | 49198921 | 49198832 | ID=MS.gene38968.t1.exon4;Parent=MS.gene38968.t1 |
| chr8.4 | CDS | 49198832 | 49198921 | 49198832 | ID=cds.MS.gene38968.t1;Parent=MS.gene38968.t1 |
| chr8.4 | exon | 49199412 | 49199489 | 49199412 | ID=MS.gene38968.t1.exon5;Parent=MS.gene38968.t1 |
| chr8.4 | CDS | 49199412 | 49199489 | 49199412 | ID=cds.MS.gene38968.t1;Parent=MS.gene38968.t1 |
| chr8.4 | exon | 49199593 | 49199757 | 49199593 | ID=MS.gene38968.t1.exon6;Parent=MS.gene38968.t1 |
| chr8.4 | CDS | 49199593 | 49199757 | 49199593 | ID=cds.MS.gene38968.t1;Parent=MS.gene38968.t1 |
| chr8.4 | exon | 49201281 | 49201649 | 49201281 | ID=MS.gene38968.t1.exon7;Parent=MS.gene38968.t1 |
| chr8.4 | CDS | 49201281 | 49201649 | 49201281 | ID=cds.MS.gene38968.t1;Parent=MS.gene38968.t1 |
| chr8.4 | exon | 49203692 | 49203978 | 49203692 | ID=MS.gene38968.t1.exon8;Parent=MS.gene38968.t1 |
| chr8.4 | CDS | 49203692 | 49203978 | 49203692 | ID=cds.MS.gene38968.t1;Parent=MS.gene38968.t1 |
| chr8.4 | exon | 49206512 | 49206674 | 49206512 | ID=MS.gene38968.t1.exon9;Parent=MS.gene38968.t1 |
| chr8.4 | CDS | 49206512 | 49206674 | 49206512 | ID=cds.MS.gene38968.t1;Parent=MS.gene38968.t1 |
| chr8.4 | exon | 49207333 | 49207686 | 49207333 | ID=MS.gene38968.t1.exon10;Parent=MS.gene38968.t1 |
| chr8.4 | CDS | 49207333 | 49207686 | 49207333 | ID=cds.MS.gene38968.t1;Parent=MS.gene38968.t1 |
| Gene Sequence |
| Protein sequence |
