Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39539.t1 | XP_013456921.1 | 98.9 | 476 | 5 | 0 | 1 | 476 | 1 | 476 | 1.90E-279 | 971.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39539.t1 | Q9SGQ0 | 69.8 | 490 | 121 | 7 | 3 | 474 | 4 | 484 | 4.8e-191 | 668.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39539.t1 | A0A072UMQ9 | 98.9 | 476 | 5 | 0 | 1 | 476 | 1 | 476 | 1.4e-279 | 971.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene39539.t1 | TF | VOZ |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39539.t1 | MTR_4g088125 | 98.950 | 476 | 5 | 0 | 1 | 476 | 1 | 476 | 0.0 | 982 |
| MS.gene39539.t1 | MTR_4g079240 | 47.421 | 504 | 195 | 10 | 1 | 438 | 2 | 501 | 9.29e-143 | 419 |
| MS.gene39539.t1 | MTR_2g014870 | 75.200 | 125 | 28 | 2 | 5 | 126 | 3 | 127 | 3.86e-56 | 183 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39539.t1 | AT1G28520 | 70.204 | 490 | 119 | 7 | 3 | 474 | 4 | 484 | 0.0 | 681 |
| MS.gene39539.t1 | AT1G28520 | 70.204 | 490 | 119 | 7 | 3 | 474 | 4 | 484 | 0.0 | 681 |
| MS.gene39539.t1 | AT1G28520 | 70.204 | 490 | 119 | 7 | 3 | 474 | 4 | 484 | 0.0 | 681 |
| MS.gene39539.t1 | AT1G28520 | 70.204 | 490 | 119 | 7 | 3 | 474 | 4 | 484 | 0.0 | 681 |
| MS.gene39539.t1 | AT1G28520 | 67.551 | 490 | 116 | 8 | 3 | 474 | 4 | 468 | 0.0 | 642 |
| MS.gene39539.t1 | AT2G42400 | 49.436 | 443 | 182 | 10 | 21 | 429 | 14 | 448 | 1.83e-128 | 380 |
Find 130 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCCTCCTTCTGCTTTCT+TGG | 0.101987 | 4.2:+23198538 | MS.gene39539:CDS |
| GTTGCTGCTCCCTCACATTC+TGG | 0.148081 | 4.2:-23198770 | None:intergenic |
| AAGCAAGTTATCAATGAATT+TGG | 0.192112 | 4.2:+23199074 | MS.gene39539:CDS |
| GAGAACACGGGCGACTATTA+TGG | 0.245346 | 4.2:+23199455 | MS.gene39539:CDS |
| CGTAAAGGTGCCATTCAAAA+TGG | 0.269912 | 4.2:-23199139 | None:intergenic |
| CTAAATGGAACATATGAATA+TGG | 0.273129 | 4.2:+23199404 | MS.gene39539:CDS |
| CTTTAGTTCTAAACGGTATA+AGG | 0.278335 | 4.2:-23199192 | None:intergenic |
| CAGTCCCAAAGTGCACATTT+TGG | 0.278981 | 4.2:-23198563 | None:intergenic |
| TTCTCGAGGGCGAGACTATT+AGG | 0.284323 | 4.2:+23198949 | MS.gene39539:CDS |
| CCTCCTCCTTCTGCTTTCTT+GGG | 0.294484 | 4.2:+23198539 | MS.gene39539:CDS |
| TCAGGCTTAGGTGCAGTTAA+TGG | 0.307307 | 4.2:-23195994 | None:intergenic |
| TGATCTGCAGCTGATGTTCC+TGG | 0.313776 | 4.2:+23195568 | MS.gene39539:CDS |
| GCCAACTTTGGCATTGATCT+TGG | 0.322951 | 4.2:-23199342 | None:intergenic |
| ATCATTTGTTATTCTTGCCT+TGG | 0.335227 | 4.2:-23199237 | None:intergenic |
| ATTGATCTTGGCTCTGCCTT+TGG | 0.340387 | 4.2:-23199330 | None:intergenic |
| TCTGAAGAGATCCTATTATA+TGG | 0.344078 | 4.2:+23199100 | MS.gene39539:CDS |
| AATTTATATGCTGGTTTCAA+TGG | 0.345408 | 4.2:+23198455 | MS.gene39539:CDS |
| TATTCATATGTTCCATTTAG+TGG | 0.352586 | 4.2:-23199401 | None:intergenic |
| CCACTTTCAAATGCTCTTCG+AGG | 0.358784 | 4.2:-23198993 | None:intergenic |
| TCCAACCCTTGTGCGGGTCT+TGG | 0.359244 | 4.2:-23198587 | None:intergenic |
| GGGCCCAAAATGTGCACTTT+GGG | 0.366259 | 4.2:+23198559 | MS.gene39539:CDS |
| ATCTTGGCTCTGCCTTTGGC+AGG | 0.367430 | 4.2:-23199326 | None:intergenic |
| TTAGAACTAAAGCTTGTTGA+TGG | 0.379159 | 4.2:+23199203 | MS.gene39539:CDS |
| TGAATTCAGGGTGGAAGTCT+TGG | 0.379269 | 4.2:+23195907 | MS.gene39539:intron |
| CGTAGAACTGGGGCCATGCC+TGG | 0.380276 | 4.2:-23198668 | None:intergenic |
| AGGCTGTGGATCCATATAAT+AGG | 0.383713 | 4.2:-23199111 | None:intergenic |
| TTGCTGCTCCCTCACATTCT+GGG | 0.388280 | 4.2:-23198769 | None:intergenic |
| GCCTGCAGAGCCTGGTCGTT+AGG | 0.397299 | 4.2:-23196018 | None:intergenic |
| AACGACCAGGCTCTGCAGGC+TGG | 0.398000 | 4.2:+23196021 | MS.gene39539:CDS |
| ACGACCAGGCTCTGCAGGCT+GGG | 0.402119 | 4.2:+23196022 | MS.gene39539:CDS |
| CTGCAAAAGCCGACAGATAT+CGG | 0.402396 | 4.2:-23195941 | None:intergenic |
| TCTCGAGGGCGAGACTATTA+GGG | 0.404083 | 4.2:+23198950 | MS.gene39539:CDS |
| TTTGATCATAATTTATATGC+TGG | 0.428255 | 4.2:+23198446 | MS.gene39539:CDS |
| TCATCAGTTTGATTTGCAAC+AGG | 0.428405 | 4.2:+23198421 | MS.gene39539:CDS |
| CAACCACGTCCACTGTAATC+TGG | 0.432462 | 4.2:-23199038 | None:intergenic |
| TGGCCCCAGTTCTACGACCC+GGG | 0.437730 | 4.2:+23198675 | MS.gene39539:CDS |
| CAACAAGCTTTAGTTCTAAA+CGG | 0.440064 | 4.2:-23199199 | None:intergenic |
| AGAACACGGGCGACTATTAT+GGG | 0.444586 | 4.2:+23199456 | MS.gene39539:CDS |
| GACAGCACCCATGCCAACTT+TGG | 0.445539 | 4.2:-23199354 | None:intergenic |
| ATTCATATGTTCCATTTAGT+GGG | 0.448423 | 4.2:-23199400 | None:intergenic |
| TGGTCGTTAGGTTCAGGCTT+AGG | 0.450727 | 4.2:-23196006 | None:intergenic |
| CCCAAGAAAGCAGAAGGAGG+AGG | 0.461567 | 4.2:-23198539 | None:intergenic |
| TGGGCCCAAAATGTGCACTT+TGG | 0.466392 | 4.2:+23198558 | MS.gene39539:CDS |
| ACCTAACGACCAGGCTCTGC+AGG | 0.467191 | 4.2:+23196017 | MS.gene39539:CDS |
| TCCTCGCAAACTGCAAATCC+AGG | 0.470484 | 4.2:-23195586 | None:intergenic |
| TTCGAGTTTGATGATGAAGA+AGG | 0.472308 | 4.2:+23195478 | None:intergenic |
| GGATTTGCAGTTTGCGAGGA+AGG | 0.474779 | 4.2:+23195589 | MS.gene39539:CDS |
| CGACCAGGCTCTGCAGGCTG+GGG | 0.475560 | 4.2:+23196023 | MS.gene39539:CDS |
| GAATTCAGGGTGGAAGTCTT+GGG | 0.477842 | 4.2:+23195908 | MS.gene39539:intron |
| GACCCGCACAAGGGTTGGAC+TGG | 0.484548 | 4.2:+23198591 | MS.gene39539:CDS |
| ATCCTTTAAACCAATGCCCC+CGG | 0.485600 | 4.2:-23198693 | None:intergenic |
| GAAGGAGGAGGGCATATACT+TGG | 0.487811 | 4.2:-23198527 | None:intergenic |
| CTTTGATCTTTCTGTTCTCG+AGG | 0.487953 | 4.2:+23198935 | MS.gene39539:CDS |
| TAAATGGAACATATGAATAT+GGG | 0.492155 | 4.2:+23199405 | MS.gene39539:CDS |
| TCAAAATGTGGCAGCCAACC+AGG | 0.492352 | 4.2:+23198379 | MS.gene39539:CDS |
| TCCAAGACCCGCACAAGGGT+TGG | 0.493065 | 4.2:+23198586 | MS.gene39539:CDS |
| GCCGCTCTAGCTTTGAATGA+AGG | 0.497242 | 4.2:+23198641 | MS.gene39539:CDS |
| GCCAAGATCAATGCCAAAGT+TGG | 0.501693 | 4.2:+23199341 | MS.gene39539:CDS |
| CAAGTTATCAATGAATTTGG+AGG | 0.512140 | 4.2:+23199077 | MS.gene39539:CDS |
| TGCTAATCTCATATTCGTAA+AGG | 0.512641 | 4.2:-23199154 | None:intergenic |
| GGTAGATAGCTAGATATAAG+AGG | 0.516496 | 4.2:-23198506 | None:intergenic |
| TCAAAATGGTTCAGAGGCTG+TGG | 0.519821 | 4.2:-23199125 | None:intergenic |
| AGAGCCTGGTCGTTAGGTTC+AGG | 0.520922 | 4.2:-23196012 | None:intergenic |
| GAATGAAGGGCCACCAGGCA+TGG | 0.521673 | 4.2:+23198655 | MS.gene39539:CDS |
| TTCTCCACAAGATAGTCATA+TGG | 0.522377 | 4.2:-23199437 | None:intergenic |
| GCTTTGAATGAAGGGCCACC+AGG | 0.524274 | 4.2:+23198650 | MS.gene39539:CDS |
| AGTTTCCACCTGATAACAAA+AGG | 0.534609 | 4.2:+23199303 | MS.gene39539:CDS |
| GAATTACCAGGTGCATTCCA+TGG | 0.536252 | 4.2:-23198803 | None:intergenic |
| TTTGATCTTTCTGTTCTCGA+GGG | 0.536500 | 4.2:+23198936 | MS.gene39539:CDS |
| ATTCTAAAGCAGCTCCATCC+TGG | 0.540756 | 4.2:-23198397 | None:intergenic |
| CAGCAACTGCAAAGTCTCCA+TGG | 0.541576 | 4.2:+23198786 | MS.gene39539:CDS |
| GGGAGAAGGCTCGTTGAGCT+CGG | 0.543281 | 4.2:-23195678 | None:intergenic |
| GGCCCCAGTTCTACGACCCG+GGG | 0.544452 | 4.2:+23198676 | MS.gene39539:CDS |
| GATCAATGCCAAAGTTGGCA+TGG | 0.545115 | 4.2:+23199346 | MS.gene39539:CDS |
| CCGCTCTAGCTTTGAATGAA+GGG | 0.545380 | 4.2:+23198642 | MS.gene39539:CDS |
| CACCAGTCCAACCCTTGTGC+GGG | 0.549255 | 4.2:-23198593 | None:intergenic |
| ACACCAGTCCAACCCTTGTG+CGG | 0.549317 | 4.2:-23198594 | None:intergenic |
| CCTCGAAGAGCATTTGAAAG+TGG | 0.553107 | 4.2:+23198993 | MS.gene39539:CDS |
| TCGAGTTTGATGATGAAGAA+GGG | 0.554322 | 4.2:+23195479 | None:intergenic |
| ACAGCAACATGATTTCCCAT+TGG | 0.555494 | 4.2:+23198325 | MS.gene39539:CDS |
| GTTTGCGCTCATCAACCAAT+GGG | 0.555849 | 4.2:-23198340 | None:intergenic |
| ATGGCCCCAGTTCTACGACC+CGG | 0.558759 | 4.2:+23198674 | MS.gene39539:CDS |
| GAGCGCAAACACTCAACCTC+AGG | 0.559169 | 4.2:+23198353 | MS.gene39539:CDS |
| TAGAACTAAAGCTTGTTGAT+GGG | 0.559679 | 4.2:+23199204 | MS.gene39539:CDS |
| ATCAATGCCAAAGTTGGCAT+GGG | 0.569128 | 4.2:+23199347 | MS.gene39539:CDS |
| TTCATATGTTCCATTTAGTG+GGG | 0.571518 | 4.2:-23199399 | None:intergenic |
| ACTTGCTGCAATGAAGAAGC+GGG | 0.572984 | 4.2:-23195698 | None:intergenic |
| TGCAATGAAGAAGCGGGAGA+AGG | 0.575278 | 4.2:-23195692 | None:intergenic |
| TGACTATCTTGTGGAGAACA+CGG | 0.579872 | 4.2:+23199442 | MS.gene39539:CDS |
| TACTTGCTGCAATGAAGAAG+CGG | 0.580011 | 4.2:-23195699 | None:intergenic |
| GCTCTTAGTGCAAAGGCACA+AGG | 0.580099 | 4.2:+23198731 | MS.gene39539:CDS |
| TGTTTGCGCTCATCAACCAA+TGG | 0.580494 | 4.2:-23198341 | None:intergenic |
| AAGGCACAAGGAAAAGATGT+TGG | 0.580647 | 4.2:+23198743 | MS.gene39539:CDS |
| TTCATCAAATGCTTCGTGAG+TGG | 0.582116 | 4.2:+23195651 | MS.gene39539:CDS |
| TTTGGGCCCAAGAAAGCAGA+AGG | 0.584965 | 4.2:-23198545 | None:intergenic |
| AGGGCGAGACTATTAGGGAA+TGG | 0.585029 | 4.2:+23198955 | MS.gene39539:CDS |
| CCAAGAAAGCAGAAGGAGGA+GGG | 0.588070 | 4.2:-23198538 | None:intergenic |
| CAATGGTACAAGTTATTGTG+AGG | 0.589421 | 4.2:+23198472 | MS.gene39539:CDS |
| GACTATCTTGTGGAGAACAC+GGG | 0.594122 | 4.2:+23199443 | MS.gene39539:CDS |
| TTGCCAGATTACAGTGGACG+TGG | 0.598415 | 4.2:+23199035 | MS.gene39539:CDS |
| TGCCATTCAAAATGGTTCAG+AGG | 0.599568 | 4.2:-23199131 | None:intergenic |
| ATGGGAAATCATGTTGCTGT+TGG | 0.604103 | 4.2:-23198322 | None:intergenic |
| TAAAGCAGCTCCATCCTGGT+TGG | 0.604183 | 4.2:-23198393 | None:intergenic |
| TCCTGGATTTGCAGTTTGCG+AGG | 0.604508 | 4.2:+23195585 | MS.gene39539:CDS |
| AAGTCTCCATGGAATGCACC+TGG | 0.606170 | 4.2:+23198797 | MS.gene39539:CDS |
| GCACAGCAGCATCAACAGTA+CGG | 0.606444 | 4.2:-23195616 | None:intergenic |
| TGTTGGCATCCCAGAATGTG+AGG | 0.607178 | 4.2:+23198760 | MS.gene39539:CDS |
| TCATATGTTCCATTTAGTGG+GGG | 0.609101 | 4.2:-23199398 | None:intergenic |
| AATGTGGCAGCCAACCAGGA+TGG | 0.609826 | 4.2:+23198383 | MS.gene39539:CDS |
| CAGATTACAGTGGACGTGGT+TGG | 0.611374 | 4.2:+23199039 | MS.gene39539:CDS |
| GACTGTCCAAGACCCGCACA+AGG | 0.617960 | 4.2:+23198581 | MS.gene39539:CDS |
| CATACTCCACCGATATCTGT+CGG | 0.625485 | 4.2:+23195932 | MS.gene39539:CDS |
| TGCACCATATGACTATCTTG+TGG | 0.628768 | 4.2:+23199433 | MS.gene39539:CDS |
| AGAACTGGGGCCATGCCTGG+TGG | 0.629740 | 4.2:-23198665 | None:intergenic |
| TGCTGATCTACAGAAGCAGA+TGG | 0.633546 | 4.2:+23199265 | MS.gene39539:CDS |
| TGGTACAAGTTATTGTGAGG+AGG | 0.634405 | 4.2:+23198475 | MS.gene39539:CDS |
| GGGCCCAAGAAAGCAGAAGG+AGG | 0.637584 | 4.2:-23198542 | None:intergenic |
| GATAACAAAAGGCCTGCCAA+AGG | 0.643078 | 4.2:+23199314 | MS.gene39539:CDS |
| TAAGCCTGAACCTAACGACC+AGG | 0.645449 | 4.2:+23196008 | MS.gene39539:CDS |
| GACCAGGCTCTGCAGGCTGG+GGG | 0.657815 | 4.2:+23196024 | MS.gene39539:CDS |
| CCCTTCATTCAAAGCTAGAG+CGG | 0.661772 | 4.2:-23198642 | None:intergenic |
| GTTGGCATCCCAGAATGTGA+GGG | 0.666558 | 4.2:+23198761 | MS.gene39539:CDS |
| AGGTCATTGCCAGATTACAG+TGG | 0.682159 | 4.2:+23199029 | MS.gene39539:CDS |
| CAAAAGCCGACAGATATCGG+TGG | 0.685536 | 4.2:-23195938 | None:intergenic |
| TGATGGGAAGAAGAACTCCA+AGG | 0.686149 | 4.2:+23199220 | MS.gene39539:CDS |
| AACCTCAGGAGTTCAAAATG+TGG | 0.696064 | 4.2:+23198367 | MS.gene39539:CDS |
| GCCCCAGTTCTACGACCCGG+GGG | 0.700926 | 4.2:+23198677 | MS.gene39539:CDS |
| ACTGTCCAAGACCCGCACAA+GGG | 0.731238 | 4.2:+23198582 | MS.gene39539:CDS |
| AAAGTGGAAACAGAAAGCAG+AGG | 0.746526 | 4.2:+23199009 | MS.gene39539:CDS |
| TCAGCTGCAGATCATCAACA+CGG | 0.775219 | 4.2:-23195559 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAATAAATGAAAAAG+TGG | - | chr4.2:23196417-23196436 | None:intergenic | 10.0% |
| !! | TTTCATTAACTTTGTAAATT+GGG | + | chr4.2:23197891-23197910 | MS.gene39539:intron | 15.0% |
| !!! | CATGTTTTTCTATTTTTATT+AGG | + | chr4.2:23196132-23196151 | MS.gene39539:intron | 15.0% |
| !!! | TTAATCAGTGTTATTAATAA+CGG | - | chr4.2:23196954-23196973 | None:intergenic | 15.0% |
| !! | ATAAATAAATAATACAGGCT+TGG | + | chr4.2:23197837-23197856 | MS.gene39539:intron | 20.0% |
| !! | GCTTCAATATAAATAATAGA+TGG | - | chr4.2:23197213-23197232 | None:intergenic | 20.0% |
| !! | GTTTCATTAACTTTGTAAAT+TGG | + | chr4.2:23197890-23197909 | MS.gene39539:intron | 20.0% |
| !! | TAAATATGTCGATCTTTAAA+AGG | - | chr4.2:23198189-23198208 | None:intergenic | 20.0% |
| !! | TAAATGGAACATATGAATAT+GGG | + | chr4.2:23199405-23199424 | MS.gene39539:CDS | 20.0% |
| !! | TAATATCATGTAATGTAAAC+TGG | + | chr4.2:23196971-23196990 | MS.gene39539:intron | 20.0% |
| !! | TTTGATCATAATTTATATGC+TGG | + | chr4.2:23198446-23198465 | MS.gene39539:CDS | 20.0% |
| !!! | AGTCTGTATTTTGTTATATT+TGG | + | chr4.2:23197126-23197145 | MS.gene39539:intron | 20.0% |
| !!! | CAATCTTTTAGAATCTTTTA+TGG | + | chr4.2:23198825-23198844 | MS.gene39539:intron | 20.0% |
| ! | AAGCAAGTTATCAATGAATT+TGG | + | chr4.2:23199074-23199093 | MS.gene39539:CDS | 25.0% |
| ! | AATTGATATGCTAGGAAATA+AGG | + | chr4.2:23197442-23197461 | MS.gene39539:intron | 25.0% |
| ! | AGTTCAAAACAACTAATAAC+CGG | - | chr4.2:23196663-23196682 | None:intergenic | 25.0% |
| ! | ATCAATTAGGTTTCTTGATA+GGG | - | chr4.2:23197429-23197448 | None:intergenic | 25.0% |
| ! | ATCACAATTCATAAAATTGC+TGG | - | chr4.2:23195817-23195836 | None:intergenic | 25.0% |
| ! | ATGAGGATAATGATTATGTT+AGG | + | chr4.2:23196587-23196606 | MS.gene39539:intron | 25.0% |
| ! | ATTCATATGTTCCATTTAGT+GGG | - | chr4.2:23199403-23199422 | None:intergenic | 25.0% |
| ! | ATTGAGTGACAATATATTAG+TGG | + | chr4.2:23195850-23195869 | MS.gene39539:intron | 25.0% |
| ! | ATTGCTTTATAGTGTTTCAT+AGG | + | chr4.2:23197868-23197887 | MS.gene39539:intron | 25.0% |
| ! | CAGCATTAAAATATGGATAA+AGG | - | chr4.2:23198235-23198254 | None:intergenic | 25.0% |
| ! | CTAAATGGAACATATGAATA+TGG | + | chr4.2:23199404-23199423 | MS.gene39539:CDS | 25.0% |
| ! | TATCAATTAGGTTTCTTGAT+AGG | - | chr4.2:23197430-23197449 | None:intergenic | 25.0% |
| ! | TATTCATATGTTCCATTTAG+TGG | - | chr4.2:23199404-23199423 | None:intergenic | 25.0% |
| ! | TATTTCCTAGCATATCAATT+AGG | - | chr4.2:23197442-23197461 | None:intergenic | 25.0% |
| ! | TCTATAAACTGCCATAAATA+AGG | - | chr4.2:23197795-23197814 | None:intergenic | 25.0% |
| ! | TGAGGATAATGATTATGTTA+GGG | + | chr4.2:23196588-23196607 | MS.gene39539:intron | 25.0% |
| ! | TTATATTGAAGCCAGAAAAA+TGG | + | chr4.2:23197221-23197240 | MS.gene39539:intron | 25.0% |
| !! | AACAAAAAGCAATCAAGTTT+TGG | - | chr4.2:23197741-23197760 | None:intergenic | 25.0% |
| !! | AGCAATTTTATGAATTGTGA+TGG | + | chr4.2:23195816-23195835 | MS.gene39539:intron | 25.0% |
| !! | ATAATATCATCCTTTTCTAG+AGG | - | chr4.2:23197029-23197048 | None:intergenic | 25.0% |
| !! | TCTTCTTTTGAATCAGTTAA+AGG | - | chr4.2:23198114-23198133 | None:intergenic | 25.0% |
| !! | TTCTAAAAGATTGAATTACC+AGG | - | chr4.2:23198818-23198837 | None:intergenic | 25.0% |
| !!! | AATTTATATGCTGGTTTCAA+TGG | + | chr4.2:23198455-23198474 | MS.gene39539:CDS | 25.0% |
| !!! | ATTTGAACATACCATTTTTC+TGG | - | chr4.2:23197235-23197254 | None:intergenic | 25.0% |
| AAAACTCAATGTGCATACAT+TGG | + | chr4.2:23197266-23197285 | MS.gene39539:intron | 30.0% | |
| ACAATATTGCTAAACCTTGT+AGG | - | chr4.2:23198882-23198901 | None:intergenic | 30.0% | |
| ACATAACATATCCAACAAAC+TGG | - | chr4.2:23198046-23198065 | None:intergenic | 30.0% | |
| AGAAACCTAATTGATATGCT+AGG | + | chr4.2:23197434-23197453 | MS.gene39539:intron | 30.0% | |
| AGAGATAGTTGAAAAAGATG+TGG | + | chr4.2:23197341-23197360 | MS.gene39539:intron | 30.0% | |
| AGCGGAATAAAATAGTGTTT+CGG | + | chr4.2:23196375-23196394 | MS.gene39539:intron | 30.0% | |
| ATAACATATCCAACAAACTG+GGG | - | chr4.2:23198044-23198063 | None:intergenic | 30.0% | |
| ATCCGTTATTGCTTAAATAG+CGG | + | chr4.2:23196357-23196376 | MS.gene39539:intron | 30.0% | |
| CAAGTTATCAATGAATTTGG+AGG | + | chr4.2:23199077-23199096 | MS.gene39539:CDS | 30.0% | |
| CATAACATATCCAACAAACT+GGG | - | chr4.2:23198045-23198064 | None:intergenic | 30.0% | |
| GAGATAGTTGAAAAAGATGT+GGG | + | chr4.2:23197342-23197361 | MS.gene39539:intron | 30.0% | |
| GGATTCCATTTAAAAGTTGA+AGG | + | chr4.2:23196544-23196563 | MS.gene39539:intron | 30.0% | |
| TAATGATTATGTTAGGGAAG+AGG | + | chr4.2:23196594-23196613 | MS.gene39539:intron | 30.0% | |
| TATGAGATGAAGAGATAAGA+TGG | - | chr4.2:23196496-23196515 | None:intergenic | 30.0% | |
| TCATGTAATGTAAACTGGAA+AGG | + | chr4.2:23196976-23196995 | MS.gene39539:intron | 30.0% | |
| TCTGAAGAGATCCTATTATA+TGG | + | chr4.2:23199100-23199119 | MS.gene39539:CDS | 30.0% | |
| TGCTAATCTCATATTCGTAA+AGG | - | chr4.2:23199157-23199176 | None:intergenic | 30.0% | |
| TGGATATGTTATGTTGCAAT+GGG | + | chr4.2:23198052-23198071 | MS.gene39539:intron | 30.0% | |
| TGGCATTCAAATTTCAAGAA+CGG | - | chr4.2:23197193-23197212 | None:intergenic | 30.0% | |
| TGTAATTGTAACAAGTTTCC+TGG | + | chr4.2:23198281-23198300 | MS.gene39539:intron | 30.0% | |
| TTACCGTGTGAATAAATCTT+GGG | + | chr4.2:23197761-23197780 | MS.gene39539:intron | 30.0% | |
| TTATCACTAGTTAGAACTAC+CGG | + | chr4.2:23196641-23196660 | MS.gene39539:intron | 30.0% | |
| TTCATATGTTCCATTTAGTG+GGG | - | chr4.2:23199402-23199421 | None:intergenic | 30.0% | |
| TTCCGCTATTTAAGCAATAA+CGG | - | chr4.2:23196362-23196381 | None:intergenic | 30.0% | |
| TTGGATATGTTATGTTGCAA+TGG | + | chr4.2:23198051-23198070 | MS.gene39539:intron | 30.0% | |
| TTTAATTATTTCCCCCTTGT+TGG | + | chr4.2:23198901-23198920 | MS.gene39539:intron | 30.0% | |
| TTTACCGTGTGAATAAATCT+TGG | + | chr4.2:23197760-23197779 | MS.gene39539:intron | 30.0% | |
| ! | CACATCCTTCAACTTTTAAA+TGG | - | chr4.2:23196552-23196571 | None:intergenic | 30.0% |
| ! | TCTTTTGAATCAGTTAAAGG+AGG | - | chr4.2:23198111-23198130 | None:intergenic | 30.0% |
| ! | TGAGTTTCTTATTCCCTTTT+GGG | + | chr4.2:23196067-23196086 | MS.gene39539:intron | 30.0% |
| ! | TTGTTTGAGATAACTGTCAT+GGG | + | chr4.2:23195778-23195797 | MS.gene39539:intron | 30.0% |
| ! | TTTGTTTGAGATAACTGTCA+TGG | + | chr4.2:23195777-23195796 | MS.gene39539:intron | 30.0% |
| !! | AGGAAACTTGTTACAATTAC+AGG | - | chr4.2:23198282-23198301 | None:intergenic | 30.0% |
| !! | ATCATTTGTTATTCTTGCCT+TGG | - | chr4.2:23199240-23199259 | None:intergenic | 30.0% |
| !! | CAACAAGCTTTAGTTCTAAA+CGG | - | chr4.2:23199202-23199221 | None:intergenic | 30.0% |
| !! | CTTTAGTTCTAAACGGTATA+AGG | - | chr4.2:23199195-23199214 | None:intergenic | 30.0% |
| !! | TAGAACTAAAGCTTGTTGAT+GGG | + | chr4.2:23199204-23199223 | MS.gene39539:CDS | 30.0% |
| !! | TTAGAACTAAAGCTTGTTGA+TGG | + | chr4.2:23199203-23199222 | MS.gene39539:CDS | 30.0% |
| !!! | TATTTCTCATAGCGGATTTT+CGG | + | chr4.2:23196907-23196926 | MS.gene39539:intron | 30.0% |
| AAGTGTGTGGAGAAAAGATA+GGG | + | chr4.2:23197389-23197408 | MS.gene39539:intron | 35.0% | |
| ACAAAGAGTTGGGTTTATCA+TGG | - | chr4.2:23197621-23197640 | None:intergenic | 35.0% | |
| ACCAGCTCAGCATTAAAATA+TGG | - | chr4.2:23198242-23198261 | None:intergenic | 35.0% | |
| AGAAATAGCAGATAGTGAAG+TGG | - | chr4.2:23196894-23196913 | None:intergenic | 35.0% | |
| AGTTGTTAATTCCATCTACC+TGG | + | chr4.2:23197661-23197680 | MS.gene39539:intron | 35.0% | |
| AGTTTCCACCTGATAACAAA+AGG | + | chr4.2:23199303-23199322 | MS.gene39539:CDS | 35.0% | |
| ATAAGATGGAGATACAGATG+TGG | - | chr4.2:23196482-23196501 | None:intergenic | 35.0% | |
| ATAGATTATCCATCCCCAAA+AGG | - | chr4.2:23196084-23196103 | None:intergenic | 35.0% | |
| ATCACGTTAAAGTGCATACT+CGG | - | chr4.2:23197692-23197711 | None:intergenic | 35.0% | |
| ATCTCCTTCAAGACATTGAT+CGG | + | chr4.2:23196520-23196539 | MS.gene39539:intron | 35.0% | |
| CAAATCTCGAAACGTAATAG+CGG | - | chr4.2:23196255-23196274 | None:intergenic | 35.0% | |
| CAATGGTACAAGTTATTGTG+AGG | + | chr4.2:23198472-23198491 | MS.gene39539:CDS | 35.0% | |
| CCTGGTTTAACTGTAAAACA+GGG | + | chr4.2:23198299-23198318 | MS.gene39539:intron | 35.0% | |
| CTGCCATAAATAAGGTACAT+AGG | - | chr4.2:23197787-23197806 | None:intergenic | 35.0% | |
| GAAACATGTGTAAACTCTTG+AGG | - | chr4.2:23198167-23198186 | None:intergenic | 35.0% | |
| GAAATAGCAGATAGTGAAGT+GGG | - | chr4.2:23196893-23196912 | None:intergenic | 35.0% | |
| GGATATCACCAATATGCAAA+AGG | - | chr4.2:23196341-23196360 | None:intergenic | 35.0% | |
| GGCAGTTTATAGACTTTGAA+AGG | + | chr4.2:23197802-23197821 | MS.gene39539:intron | 35.0% | |
| GGTAGATAGCTAGATATAAG+AGG | - | chr4.2:23198509-23198528 | None:intergenic | 35.0% | |
| TAAACCCAACTCTTTGTATG+TGG | + | chr4.2:23197624-23197643 | MS.gene39539:intron | 35.0% | |
| TAGATTATCCATCCCCAAAA+GGG | - | chr4.2:23196083-23196102 | None:intergenic | 35.0% | |
| TATTTCAGAAAATGCGTCTC+TGG | + | chr4.2:23197558-23197577 | MS.gene39539:intron | 35.0% | |
| TCAACCACATACAAAGAGTT+GGG | - | chr4.2:23197631-23197650 | None:intergenic | 35.0% | |
| TCATATGTTCCATTTAGTGG+GGG | - | chr4.2:23199401-23199420 | None:intergenic | 35.0% | |
| TCCTGGTTTAACTGTAAAAC+AGG | + | chr4.2:23198298-23198317 | MS.gene39539:intron | 35.0% | |
| TGGAATAGTCATTAAGCATC+AGG | + | chr4.2:23197943-23197962 | MS.gene39539:intron | 35.0% | |
| TTACAGGTGAGATCTAGTTA+CGG | - | chr4.2:23198266-23198285 | None:intergenic | 35.0% | |
| TTCTCCACAAGATAGTCATA+TGG | - | chr4.2:23199440-23199459 | None:intergenic | 35.0% | |
| TTTGATCTTTCTGTTCTCGA+GGG | + | chr4.2:23198936-23198955 | MS.gene39539:CDS | 35.0% | |
| ! | AAAGCTGTGATTTTGAACTG+TGG | + | chr4.2:23195874-23195893 | MS.gene39539:intron | 35.0% |
| ! | AAGTTAGAAAGAGAAGTGTG+TGG | + | chr4.2:23197376-23197395 | MS.gene39539:intron | 35.0% |
| ! | ACTGATTCAAAAGAAGAGAG+AGG | + | chr4.2:23198117-23198136 | MS.gene39539:intron | 35.0% |
| ! | ATCCTCATTTTCAGATAGTG+AGG | - | chr4.2:23196575-23196594 | None:intergenic | 35.0% |
| ! | GAATCAGTTGCTTTCAAATC+AGG | - | chr4.2:23197969-23197988 | None:intergenic | 35.0% |
| ! | GAGTTTCTTATTCCCTTTTG+GGG | + | chr4.2:23196068-23196087 | MS.gene39539:intron | 35.0% |
| ! | GTGAGTTTCTTATTCCCTTT+TGG | + | chr4.2:23196066-23196085 | MS.gene39539:intron | 35.0% |
| ! | GTTTTCACCAGTCATTAAGT+GGG | + | chr4.2:23197066-23197085 | MS.gene39539:intron | 35.0% |
| ! | TGCATCACATAGTCTTTTCA+AGG | + | chr4.2:23195523-23195542 | MS.gene39539:CDS | 35.0% |
| ! | TGTTTTCACCAGTCATTAAG+TGG | + | chr4.2:23197065-23197084 | MS.gene39539:intron | 35.0% |
| ! | TTTTCACCAGTCATTAAGTG+GGG | + | chr4.2:23197067-23197086 | MS.gene39539:intron | 35.0% |
| ! | TTTTGAACTGTGGTGTTTGT+TGG | + | chr4.2:23195884-23195903 | MS.gene39539:intron | 35.0% |
| ! | TTTTTCTGCTCTTAGTGCAA+AGG | + | chr4.2:23198724-23198743 | MS.gene39539:CDS | 35.0% |
| !! | ACATAGTCTTTTCAAGGACA+AGG | + | chr4.2:23195529-23195548 | MS.gene39539:CDS | 35.0% |
| !! | CTATCTGCTATTTCTCATAG+CGG | + | chr4.2:23196899-23196918 | MS.gene39539:intron | 35.0% |
| !! | TCATCAGTTTGATTTGCAAC+AGG | + | chr4.2:23198421-23198440 | MS.gene39539:CDS | 35.0% |
| !!! | GAGACGCATTTTCTGAAATA+TGG | - | chr4.2:23197558-23197577 | None:intergenic | 35.0% |
| !!! | GGGTAACATCATTTTTCAAG+AGG | + | chr4.2:23196044-23196063 | MS.gene39539:CDS | 35.0% |
| !!! | TCCATATTTTAATGCTGAGC+TGG | + | chr4.2:23198238-23198257 | MS.gene39539:intron | 35.0% |
| AAAGTGGAAACAGAAAGCAG+AGG | + | chr4.2:23199009-23199028 | MS.gene39539:CDS | 40.0% | |
| AACCTCAGGAGTTCAAAATG+TGG | + | chr4.2:23198367-23198386 | MS.gene39539:CDS | 40.0% | |
| AAGGCACAAGGAAAAGATGT+TGG | + | chr4.2:23198743-23198762 | MS.gene39539:CDS | 40.0% | |
| ACAGCAACATGATTTCCCAT+TGG | + | chr4.2:23198325-23198344 | MS.gene39539:CDS | 40.0% | |
| AGATGTGGTTTAGTGATGAG+AGG | - | chr4.2:23196467-23196486 | None:intergenic | 40.0% | |
| AGGCCCAAGATTTATTCACA+CGG | - | chr4.2:23197767-23197786 | None:intergenic | 40.0% | |
| AGGCTGTGGATCCATATAAT+AGG | - | chr4.2:23199114-23199133 | None:intergenic | 40.0% | |
| ATAGTGAAGTGGGCAAATAG+CGG | - | chr4.2:23196883-23196902 | None:intergenic | 40.0% | |
| ATCAATGCCAAAGTTGGCAT+GGG | + | chr4.2:23199347-23199366 | MS.gene39539:CDS | 40.0% | |
| ATGGGAAATCATGTTGCTGT+TGG | - | chr4.2:23198325-23198344 | None:intergenic | 40.0% | |
| CAACTCTTTGTATGTGGTTG+AGG | + | chr4.2:23197630-23197649 | MS.gene39539:intron | 40.0% | |
| CTCAACCACATACAAAGAGT+TGG | - | chr4.2:23197632-23197651 | None:intergenic | 40.0% | |
| CTTTGATCTTTCTGTTCTCG+AGG | + | chr4.2:23198935-23198954 | MS.gene39539:CDS | 40.0% | |
| GAAACGTAATAGCGGTATAG+CGG | - | chr4.2:23196247-23196266 | None:intergenic | 40.0% | |
| GAAGTGTGTGGAGAAAAGAT+AGG | + | chr4.2:23197388-23197407 | MS.gene39539:intron | 40.0% | |
| GTACAGTGTGCAAGAAAAGA+TGG | - | chr4.2:23198213-23198232 | None:intergenic | 40.0% | |
| GTTATGTTGCAATGGGCATT+AGG | + | chr4.2:23198059-23198078 | MS.gene39539:intron | 40.0% | |
| TCACTTTCGATTTCTGCTAC+TGG | + | chr4.2:23196704-23196723 | MS.gene39539:intron | 40.0% | |
| TGACTATCTTGTGGAGAACA+CGG | + | chr4.2:23199442-23199461 | MS.gene39539:CDS | 40.0% | |
| TGCACCATATGACTATCTTG+TGG | + | chr4.2:23199433-23199452 | MS.gene39539:CDS | 40.0% | |
| TGCCATTCAAAATGGTTCAG+AGG | - | chr4.2:23199134-23199153 | None:intergenic | 40.0% | |
| TGCCTCACTATCTGAAAATG+AGG | + | chr4.2:23196570-23196589 | MS.gene39539:intron | 40.0% | |
| TGGTACAAGTTATTGTGAGG+AGG | + | chr4.2:23198475-23198494 | MS.gene39539:CDS | 40.0% | |
| TTCAATGCAATTGCAGCTAG+TGG | + | chr4.2:23195752-23195771 | MS.gene39539:intron | 40.0% | |
| TTCATCAAATGCTTCGTGAG+TGG | + | chr4.2:23195651-23195670 | MS.gene39539:CDS | 40.0% | |
| ! | AGCCTCTGAACCATTTTGAA+TGG | + | chr4.2:23199129-23199148 | MS.gene39539:CDS | 40.0% |
| ! | AGTCCCAAAGTGCACATTTT+GGG | - | chr4.2:23198565-23198584 | None:intergenic | 40.0% |
| ! | CCCTGTTTTACAGTTAAACC+AGG | - | chr4.2:23198302-23198321 | None:intergenic | 40.0% |
| ! | CGAATCTTCTCCTCTAGAAA+AGG | + | chr4.2:23197016-23197035 | MS.gene39539:intron | 40.0% |
| ! | GGGCCTATGTACCTTATTTA+TGG | + | chr4.2:23197781-23197800 | MS.gene39539:intron | 40.0% |
| ! | GGTGTTTGTTGGTGAATTCA+GGG | + | chr4.2:23195895-23195914 | MS.gene39539:intron | 40.0% |
| ! | TACTTGCTGCAATGAAGAAG+CGG | - | chr4.2:23195702-23195721 | None:intergenic | 40.0% |
| ! | TAGCAGTGCCTTTTGCATAT+TGG | + | chr4.2:23196330-23196349 | MS.gene39539:intron | 40.0% |
| ! | TGGTGTTTGTTGGTGAATTC+AGG | + | chr4.2:23195894-23195913 | MS.gene39539:intron | 40.0% |
| !! | CGTAAAGGTGCCATTCAAAA+TGG | - | chr4.2:23199142-23199161 | None:intergenic | 40.0% |
| !! | TTCTTATTCCCTTTTGGGGA+TGG | + | chr4.2:23196072-23196091 | MS.gene39539:intron | 40.0% |
| AAACGACCCCACTTAATGAC+TGG | - | chr4.2:23197076-23197095 | None:intergenic | 45.0% | |
| AAAGATAGGGCCCATGATCA+TGG | + | chr4.2:23197402-23197421 | MS.gene39539:intron | 45.0% | |
| AACGGATCGTGCAAAATAGC+AGG | - | chr4.2:23196936-23196955 | None:intergenic | 45.0% | |
| AAGATAGGGCCCATGATCAT+GGG | + | chr4.2:23197403-23197422 | MS.gene39539:intron | 45.0% | |
| AGAACACGGGCGACTATTAT+GGG | + | chr4.2:23199456-23199475 | MS.gene39539:CDS | 45.0% | |
| AGGTCATTGCCAGATTACAG+TGG | + | chr4.2:23199029-23199048 | MS.gene39539:CDS | 45.0% | |
| ATCCTTTAAACCAATGCCCC+CGG | - | chr4.2:23198696-23198715 | None:intergenic | 45.0% | |
| CACTGCTATTGCAGTGATAG+CGG | - | chr4.2:23196318-23196337 | None:intergenic | 45.0% | |
| CATACTCCACCGATATCTGT+CGG | + | chr4.2:23195932-23195951 | MS.gene39539:CDS | 45.0% | |
| CATATCCAACAAACTGGGGT+AGG | - | chr4.2:23198040-23198059 | None:intergenic | 45.0% | |
| CATTACCTACCCCAGTTTGT+TGG | + | chr4.2:23198032-23198051 | MS.gene39539:intron | 45.0% | |
| CCACTTTCAAATGCTCTTCG+AGG | - | chr4.2:23198996-23199015 | None:intergenic | 45.0% | |
| CCCTTCATTCAAAGCTAGAG+CGG | - | chr4.2:23198645-23198664 | None:intergenic | 45.0% | |
| CTGCAAAAGCCGACAGATAT+CGG | - | chr4.2:23195944-23195963 | None:intergenic | 45.0% | |
| GAATTACCAGGTGCATTCCA+TGG | - | chr4.2:23198806-23198825 | None:intergenic | 45.0% | |
| GAATTCAGGGTGGAAGTCTT+GGG | + | chr4.2:23195908-23195927 | MS.gene39539:intron | 45.0% | |
| GACTATCTTGTGGAGAACAC+GGG | + | chr4.2:23199443-23199462 | MS.gene39539:CDS | 45.0% | |
| GATAACAAAAGGCCTGCCAA+AGG | + | chr4.2:23199314-23199333 | MS.gene39539:CDS | 45.0% | |
| GATCAATGCCAAAGTTGGCA+TGG | + | chr4.2:23199346-23199365 | MS.gene39539:CDS | 45.0% | |
| GCCAAGATCAATGCCAAAGT+TGG | + | chr4.2:23199341-23199360 | MS.gene39539:CDS | 45.0% | |
| GTTTGCGCTCATCAACCAAT+GGG | - | chr4.2:23198343-23198362 | None:intergenic | 45.0% | |
| TCAAAATGGTTCAGAGGCTG+TGG | - | chr4.2:23199128-23199147 | None:intergenic | 45.0% | |
| TCAGCTGCAGATCATCAACA+CGG | - | chr4.2:23195562-23195581 | None:intergenic | 45.0% | |
| TCAGGCTTAGGTGCAGTTAA+TGG | - | chr4.2:23195997-23196016 | None:intergenic | 45.0% | |
| TCCTCCGATCAATGTCTTGA+AGG | - | chr4.2:23196527-23196546 | None:intergenic | 45.0% | |
| TCCTTCAAGACATTGATCGG+AGG | + | chr4.2:23196523-23196542 | MS.gene39539:intron | 45.0% | |
| TGAATTCAGGGTGGAAGTCT+TGG | + | chr4.2:23195907-23195926 | MS.gene39539:intron | 45.0% | |
| TGATGGGAAGAAGAACTCCA+AGG | + | chr4.2:23199220-23199239 | MS.gene39539:CDS | 45.0% | |
| TGCTGATCTACAGAAGCAGA+TGG | + | chr4.2:23199265-23199284 | MS.gene39539:CDS | 45.0% | |
| TGTTTGCGCTCATCAACCAA+TGG | - | chr4.2:23198344-23198363 | None:intergenic | 45.0% | |
| TTGATAGGGCCCATGATCAT+GGG | - | chr4.2:23197415-23197434 | None:intergenic | 45.0% | |
| TTTAGTGATGAGAGGCTAGC+TGG | - | chr4.2:23196459-23196478 | None:intergenic | 45.0% | |
| TTTGTCTGCTACAGCCTACA+AGG | + | chr4.2:23198865-23198884 | MS.gene39539:intron | 45.0% | |
| ! | AAAGAAGAGAGAGGCTCTGA+TGG | + | chr4.2:23198126-23198145 | MS.gene39539:intron | 45.0% |
| ! | ACTTGCTGCAATGAAGAAGC+GGG | - | chr4.2:23195701-23195720 | None:intergenic | 45.0% |
| ! | CAGTCCCAAAGTGCACATTT+TGG | - | chr4.2:23198566-23198585 | None:intergenic | 45.0% |
| ! | GTTTGTTGGTGAATTCAGGG+TGG | + | chr4.2:23195898-23195917 | MS.gene39539:intron | 45.0% |
| ! | TAGCGTTTCGCCTTTTGTTG+CGG | - | chr4.2:23196288-23196307 | None:intergenic | 45.0% |
| ! | TGCCACATTTTGAACTCCTG+AGG | - | chr4.2:23198372-23198391 | None:intergenic | 45.0% |
| !! | ATTCTAAAGCAGCTCCATCC+TGG | - | chr4.2:23198400-23198419 | None:intergenic | 45.0% |
| !! | ATTGATCTTGGCTCTGCCTT+TGG | - | chr4.2:23199333-23199352 | None:intergenic | 45.0% |
| !! | CCGCTCTAGCTTTGAATGAA+GGG | + | chr4.2:23198642-23198661 | MS.gene39539:CDS | 45.0% |
| !! | CCTCGAAGAGCATTTGAAAG+TGG | + | chr4.2:23198993-23199012 | MS.gene39539:CDS | 45.0% |
| !! | GCCAACTTTGGCATTGATCT+TGG | - | chr4.2:23199345-23199364 | None:intergenic | 45.0% |
| !! | TTGGCAGGCCTTTTGTTATC+AGG | - | chr4.2:23199314-23199333 | None:intergenic | 45.0% |
| !! | AATTAATAAATAAATAATAC+AGG | + | chr4.2:23197832-23197851 | MS.gene39539:intron | 5.0% |
| AAGAGCTCTGCACTCCAACA+AGG | - | chr4.2:23198918-23198937 | None:intergenic | 50.0% | |
| AAGCAACCACCCGCAACAAA+AGG | + | chr4.2:23196275-23196294 | MS.gene39539:intron | 50.0% | |
| AAGTCTCCATGGAATGCACC+TGG | + | chr4.2:23198797-23198816 | MS.gene39539:CDS | 50.0% | |
| AGAGCTCTGCACTCCAACAA+GGG | - | chr4.2:23198917-23198936 | None:intergenic | 50.0% | |
| AGGGCGAGACTATTAGGGAA+TGG | + | chr4.2:23198955-23198974 | MS.gene39539:CDS | 50.0% | |
| CAAAAGCCGACAGATATCGG+TGG | - | chr4.2:23195941-23195960 | None:intergenic | 50.0% | |
| CAACCACGTCCACTGTAATC+TGG | - | chr4.2:23199041-23199060 | None:intergenic | 50.0% | |
| CACAGAATGCCCCCACTAAA+TGG | + | chr4.2:23199389-23199408 | MS.gene39539:CDS | 50.0% | |
| CAGATTACAGTGGACGTGGT+TGG | + | chr4.2:23199039-23199058 | MS.gene39539:CDS | 50.0% | |
| CAGCAACTGCAAAGTCTCCA+TGG | + | chr4.2:23198786-23198805 | MS.gene39539:CDS | 50.0% | |
| CCAAGAAAGCAGAAGGAGGA+GGG | - | chr4.2:23198541-23198560 | None:intergenic | 50.0% | |
| CCTCCTCCTTCTGCTTTCTT+GGG | + | chr4.2:23198539-23198558 | MS.gene39539:CDS | 50.0% | |
| CTTGATAGGGCCCATGATCA+TGG | - | chr4.2:23197416-23197435 | None:intergenic | 50.0% | |
| GAGAACACGGGCGACTATTA+TGG | + | chr4.2:23199455-23199474 | MS.gene39539:CDS | 50.0% | |
| GCACAGCAGCATCAACAGTA+CGG | - | chr4.2:23195619-23195638 | None:intergenic | 50.0% | |
| GGATTTGCAGTTTGCGAGGA+AGG | + | chr4.2:23195589-23195608 | MS.gene39539:CDS | 50.0% | |
| GGGCCCAAAATGTGCACTTT+GGG | + | chr4.2:23198559-23198578 | MS.gene39539:CDS | 50.0% | |
| GTTGGCATCCCAGAATGTGA+GGG | + | chr4.2:23198761-23198780 | MS.gene39539:CDS | 50.0% | |
| TAAAGCAGCTCCATCCTGGT+TGG | - | chr4.2:23198396-23198415 | None:intergenic | 50.0% | |
| TAAGCCTGAACCTAACGACC+AGG | + | chr4.2:23196008-23196027 | MS.gene39539:CDS | 50.0% | |
| TCAAAATGTGGCAGCCAACC+AGG | + | chr4.2:23198379-23198398 | MS.gene39539:CDS | 50.0% | |
| TCCTCGCAAACTGCAAATCC+AGG | - | chr4.2:23195589-23195608 | None:intergenic | 50.0% | |
| TCCTGGATTTGCAGTTTGCG+AGG | + | chr4.2:23195585-23195604 | MS.gene39539:CDS | 50.0% | |
| TCCTTTAAACCAATGCCCCC+GGG | - | chr4.2:23198695-23198714 | None:intergenic | 50.0% | |
| TCTCGAGGGCGAGACTATTA+GGG | + | chr4.2:23198950-23198969 | MS.gene39539:CDS | 50.0% | |
| TGATCTGCAGCTGATGTTCC+TGG | + | chr4.2:23195568-23195587 | MS.gene39539:CDS | 50.0% | |
| TGCAATGAAGAAGCGGGAGA+AGG | - | chr4.2:23195695-23195714 | None:intergenic | 50.0% | |
| TGGGCCCAAAATGTGCACTT+TGG | + | chr4.2:23198558-23198577 | MS.gene39539:CDS | 50.0% | |
| TGGTCGTTAGGTTCAGGCTT+AGG | - | chr4.2:23196009-23196028 | None:intergenic | 50.0% | |
| TGTTGGCATCCCAGAATGTG+AGG | + | chr4.2:23198760-23198779 | MS.gene39539:CDS | 50.0% | |
| TTCTCGAGGGCGAGACTATT+AGG | + | chr4.2:23198949-23198968 | MS.gene39539:CDS | 50.0% | |
| TTGCCAGATTACAGTGGACG+TGG | + | chr4.2:23199035-23199054 | MS.gene39539:CDS | 50.0% | |
| TTGCTGCTCCCTCACATTCT+GGG | - | chr4.2:23198772-23198791 | None:intergenic | 50.0% | |
| TTTGGGCCCAAGAAAGCAGA+AGG | - | chr4.2:23198548-23198567 | None:intergenic | 50.0% | |
| ! | AGCGTTTCGCCTTTTGTTGC+GGG | - | chr4.2:23196287-23196306 | None:intergenic | 50.0% |
| ! | GAAGGAGGAGGGCATATACT+TGG | - | chr4.2:23198530-23198549 | None:intergenic | 50.0% |
| ! | GCTCTTAGTGCAAAGGCACA+AGG | + | chr4.2:23198731-23198750 | MS.gene39539:CDS | 50.0% |
| !! | GCAGGCCTTTTGTTATCAGG+TGG | - | chr4.2:23199311-23199330 | None:intergenic | 50.0% |
| !! | GCCGCTCTAGCTTTGAATGA+AGG | + | chr4.2:23198641-23198660 | MS.gene39539:CDS | 50.0% |
| !! | GTTAGCTCTGATGTGCTGCA+TGG | + | chr4.2:23197923-23197942 | MS.gene39539:intron | 50.0% |
| AATGTGGCAGCCAACCAGGA+TGG | + | chr4.2:23198383-23198402 | MS.gene39539:CDS | 55.0% | |
| ACACCAGTCCAACCCTTGTG+CGG | - | chr4.2:23198597-23198616 | None:intergenic | 55.0% | |
| ACTCGGTAGCTCCAGGTAGA+TGG | - | chr4.2:23197675-23197694 | None:intergenic | 55.0% | |
| ACTGTCCAAGACCCGCACAA+GGG | + | chr4.2:23198582-23198601 | MS.gene39539:CDS | 55.0% | |
| AGAGCCTGGTCGTTAGGTTC+AGG | - | chr4.2:23196015-23196034 | None:intergenic | 55.0% | |
| AGCTCTGCACTCCAACAAGG+GGG | - | chr4.2:23198915-23198934 | None:intergenic | 55.0% | |
| AGTGCATACTCGGTAGCTCC+AGG | - | chr4.2:23197682-23197701 | None:intergenic | 55.0% | |
| CCCAAGAAAGCAGAAGGAGG+AGG | - | chr4.2:23198542-23198561 | None:intergenic | 55.0% | |
| CCCTCCTCCTTCTGCTTTCT+TGG | + | chr4.2:23198538-23198557 | MS.gene39539:CDS | 55.0% | |
| GACAGCACCCATGCCAACTT+TGG | - | chr4.2:23199357-23199376 | None:intergenic | 55.0% | |
| GAGCGCAAACACTCAACCTC+AGG | + | chr4.2:23198353-23198372 | MS.gene39539:CDS | 55.0% | |
| GAGCTCTGCACTCCAACAAG+GGG | - | chr4.2:23198916-23198935 | None:intergenic | 55.0% | |
| GCGGTATAGCGGCGCTATAT+CGG | - | chr4.2:23196236-23196255 | None:intergenic | 55.0% | |
| GTTGCTGCTCCCTCACATTC+TGG | - | chr4.2:23198773-23198792 | None:intergenic | 55.0% | |
| ! | AGAGAGAGGCTCTGATGGTG+TGG | + | chr4.2:23198131-23198150 | MS.gene39539:intron | 55.0% |
| ! | GCTTTGAATGAAGGGCCACC+AGG | + | chr4.2:23198650-23198669 | MS.gene39539:CDS | 55.0% |
| ! | GCTTTTGCAGCTCTGTGAGG+AGG | + | chr4.2:23195954-23195973 | MS.gene39539:CDS | 55.0% |
| ! | GTTTCGCCTTTTGTTGCGGG+TGG | - | chr4.2:23196284-23196303 | None:intergenic | 55.0% |
| ! | TCGGCTTTTGCAGCTCTGTG+AGG | + | chr4.2:23195951-23195970 | MS.gene39539:CDS | 55.0% |
| !! | ACCCGGGGGCATTGGTTTAA+AGG | + | chr4.2:23198691-23198710 | MS.gene39539:CDS | 55.0% |
| !! | ATCTTGGCTCTGCCTTTGGC+AGG | - | chr4.2:23199329-23199348 | None:intergenic | 55.0% |
| !! | ATGAGAGGCTAGCTGGCTTG+TGG | - | chr4.2:23196452-23196471 | None:intergenic | 55.0% |
| !! | TAGCTGGCTTGTGGGGCTTA+GGG | - | chr4.2:23196443-23196462 | None:intergenic | 55.0% |
| !! | TGAGAGGCTAGCTGGCTTGT+GGG | - | chr4.2:23196451-23196470 | None:intergenic | 55.0% |
| ACCTAACGACCAGGCTCTGC+AGG | + | chr4.2:23196017-23196036 | MS.gene39539:CDS | 60.0% | |
| ATGGCCCCAGTTCTACGACC+CGG | + | chr4.2:23198674-23198693 | MS.gene39539:CDS | 60.0% | |
| CACCAGTCCAACCCTTGTGC+GGG | - | chr4.2:23198596-23198615 | None:intergenic | 60.0% | |
| GAATGAAGGGCCACCAGGCA+TGG | + | chr4.2:23198655-23198674 | MS.gene39539:CDS | 60.0% | |
| GACTGTCCAAGACCCGCACA+AGG | + | chr4.2:23198581-23198600 | MS.gene39539:CDS | 60.0% | |
| GGGAGAAGGCTCGTTGAGCT+CGG | - | chr4.2:23195681-23195700 | None:intergenic | 60.0% | |
| GGGCCCAAGAAAGCAGAAGG+AGG | - | chr4.2:23198545-23198564 | None:intergenic | 60.0% | |
| TCCAACCCTTGTGCGGGTCT+TGG | - | chr4.2:23198590-23198609 | None:intergenic | 60.0% | |
| TCCAAGACCCGCACAAGGGT+TGG | + | chr4.2:23198586-23198605 | MS.gene39539:CDS | 60.0% | |
| !! | AGCTGGCTTGTGGGGCTTAG+GGG | - | chr4.2:23196442-23196461 | None:intergenic | 60.0% |
| !! | CTAGCTGGCTTGTGGGGCTT+AGG | - | chr4.2:23196444-23196463 | None:intergenic | 60.0% |
| !! | GAGAGGCTAGCTGGCTTGTG+GGG | - | chr4.2:23196450-23196469 | None:intergenic | 60.0% |
| !! | GGGGGCATTCTGTGAGAAGC+TGG | - | chr4.2:23199383-23199402 | None:intergenic | 60.0% |
| AACGACCAGGCTCTGCAGGC+TGG | + | chr4.2:23196021-23196040 | MS.gene39539:CDS | 65.0% | |
| ACGACCAGGCTCTGCAGGCT+GGG | + | chr4.2:23196022-23196041 | MS.gene39539:CDS | 65.0% | |
| AGAACTGGGGCCATGCCTGG+TGG | - | chr4.2:23198668-23198687 | None:intergenic | 65.0% | |
| ATGCCCCCGGGTCGTAGAAC+TGG | - | chr4.2:23198683-23198702 | None:intergenic | 65.0% | |
| CGTAGAACTGGGGCCATGCC+TGG | - | chr4.2:23198671-23198690 | None:intergenic | 65.0% | |
| GACCCGCACAAGGGTTGGAC+TGG | + | chr4.2:23198591-23198610 | MS.gene39539:CDS | 65.0% | |
| GCCTGCAGAGCCTGGTCGTT+AGG | - | chr4.2:23196021-23196040 | None:intergenic | 65.0% | |
| TGCCCCCGGGTCGTAGAACT+GGG | - | chr4.2:23198682-23198701 | None:intergenic | 65.0% | |
| TGGCCCCAGTTCTACGACCC+GGG | + | chr4.2:23198675-23198694 | MS.gene39539:CDS | 65.0% | |
| ! | GTTCTACGACCCGGGGGCAT+TGG | + | chr4.2:23198683-23198702 | MS.gene39539:CDS | 65.0% |
| CGACCAGGCTCTGCAGGCTG+GGG | + | chr4.2:23196023-23196042 | MS.gene39539:CDS | 70.0% | |
| GACCAGGCTCTGCAGGCTGG+GGG | + | chr4.2:23196024-23196043 | MS.gene39539:CDS | 70.0% | |
| GCCCCAGTTCTACGACCCGG+GGG | + | chr4.2:23198677-23198696 | MS.gene39539:CDS | 70.0% | |
| GCCCCCGGGTCGTAGAACTG+GGG | - | chr4.2:23198681-23198700 | None:intergenic | 70.0% | |
| GGCCCCAGTTCTACGACCCG+GGG | + | chr4.2:23198676-23198695 | MS.gene39539:CDS | 70.0% | |
| TACCCCCAGCCTGCAGAGCC+TGG | - | chr4.2:23196029-23196048 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 23195491 | 23199484 | 23195491 | ID=MS.gene39539 |
| chr4.2 | mRNA | 23195491 | 23199484 | 23195491 | ID=MS.gene39539.t1;Parent=MS.gene39539 |
| chr4.2 | exon | 23195491 | 23195718 | 23195491 | ID=MS.gene39539.t1.exon1;Parent=MS.gene39539.t1 |
| chr4.2 | CDS | 23195491 | 23195718 | 23195491 | ID=cds.MS.gene39539.t1;Parent=MS.gene39539.t1 |
| chr4.2 | exon | 23195916 | 23196065 | 23195916 | ID=MS.gene39539.t1.exon2;Parent=MS.gene39539.t1 |
| chr4.2 | CDS | 23195916 | 23196065 | 23195916 | ID=cds.MS.gene39539.t1;Parent=MS.gene39539.t1 |
| chr4.2 | exon | 23198320 | 23198818 | 23198320 | ID=MS.gene39539.t1.exon3;Parent=MS.gene39539.t1 |
| chr4.2 | CDS | 23198320 | 23198818 | 23198320 | ID=cds.MS.gene39539.t1;Parent=MS.gene39539.t1 |
| chr4.2 | exon | 23198931 | 23199484 | 23198931 | ID=MS.gene39539.t1.exon4;Parent=MS.gene39539.t1 |
| chr4.2 | CDS | 23198931 | 23199484 | 23198931 | ID=cds.MS.gene39539.t1;Parent=MS.gene39539.t1 |
| Gene Sequence |
| Protein sequence |
