Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39798.t1 | AET00075.1 | 80.7 | 461 | 72 | 2 | 12 | 459 | 5 | 461 | 2.80E-187 | 664.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39798.t1 | Q8S9H7 | 45.5 | 121 | 54 | 3 | 257 | 376 | 123 | 232 | 3.1e-17 | 91.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39798.t1 | G7K310 | 80.7 | 461 | 72 | 2 | 12 | 459 | 5 | 461 | 2.0e-187 | 664.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene39798.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39798.t1 | MTR_5g088060 | 85.683 | 461 | 49 | 2 | 12 | 459 | 5 | 461 | 0.0 | 774 |
| MS.gene39798.t1 | MTR_5g488160 | 85.683 | 461 | 49 | 2 | 12 | 459 | 5 | 461 | 0.0 | 774 |
| MS.gene39798.t1 | MTR_5g088010 | 88.142 | 253 | 21 | 3 | 212 | 459 | 1 | 249 | 1.73e-149 | 426 |
| MS.gene39798.t1 | MTR_5g088005 | 93.789 | 161 | 10 | 0 | 1 | 161 | 1 | 161 | 7.54e-106 | 311 |
| MS.gene39798.t1 | MTR_5g088200 | 65.574 | 244 | 20 | 4 | 1 | 180 | 1 | 244 | 2.02e-91 | 296 |
| MS.gene39798.t1 | MTR_5g027570 | 64.681 | 235 | 68 | 7 | 183 | 406 | 1 | 231 | 3.41e-84 | 258 |
| MS.gene39798.t1 | MTR_5g027550 | 48.973 | 292 | 71 | 9 | 183 | 459 | 1 | 229 | 9.17e-62 | 201 |
| MS.gene39798.t1 | MTR_5g027770 | 56.329 | 158 | 36 | 5 | 7 | 131 | 154 | 311 | 9.89e-38 | 140 |
| MS.gene39798.t1 | MTR_5g027770 | 44.138 | 145 | 29 | 5 | 1 | 125 | 1 | 113 | 1.02e-17 | 84.3 |
| MS.gene39798.t1 | MTR_5g027770 | 54.878 | 82 | 23 | 3 | 196 | 271 | 98 | 171 | 3.46e-14 | 73.6 |
| MS.gene39798.t1 | MTR_5g027780 | 48.936 | 141 | 33 | 4 | 2 | 117 | 1 | 127 | 1.18e-24 | 100 |
| MS.gene39798.t1 | MTR_8g063600 | 58.228 | 79 | 31 | 2 | 264 | 341 | 103 | 180 | 2.26e-22 | 97.1 |
| MS.gene39798.t1 | MTR_5g069710 | 58.228 | 79 | 29 | 2 | 268 | 345 | 134 | 209 | 2.47e-22 | 97.4 |
| MS.gene39798.t1 | MTR_3g462790 | 56.627 | 83 | 32 | 2 | 268 | 349 | 149 | 228 | 4.95e-22 | 97.1 |
| MS.gene39798.t1 | MTR_8g063870 | 51.064 | 94 | 45 | 1 | 248 | 341 | 74 | 166 | 5.12e-22 | 95.9 |
| MS.gene39798.t1 | MTR_5g081860 | 56.790 | 81 | 33 | 2 | 255 | 334 | 113 | 192 | 3.03e-21 | 93.6 |
| MS.gene39798.t1 | MTR_1g111830 | 62.687 | 67 | 22 | 1 | 268 | 334 | 126 | 189 | 3.64e-21 | 92.8 |
| MS.gene39798.t1 | MTR_4g111975 | 42.735 | 117 | 57 | 5 | 264 | 378 | 135 | 243 | 1.48e-20 | 92.4 |
| MS.gene39798.t1 | MTR_7g067080 | 60.294 | 68 | 24 | 1 | 268 | 335 | 142 | 206 | 1.84e-20 | 92.0 |
| MS.gene39798.t1 | MTR_1g048660 | 55.556 | 72 | 29 | 1 | 268 | 339 | 14 | 82 | 1.03e-18 | 81.3 |
| MS.gene39798.t1 | MTR_5g075760 | 42.241 | 116 | 64 | 2 | 223 | 338 | 64 | 176 | 1.32e-18 | 84.7 |
| MS.gene39798.t1 | MTR_3g104370 | 48.571 | 70 | 36 | 0 | 268 | 337 | 93 | 162 | 2.23e-18 | 84.3 |
| MS.gene39798.t1 | MTR_2g100930 | 53.846 | 65 | 27 | 1 | 268 | 332 | 111 | 172 | 8.12e-18 | 85.1 |
| MS.gene39798.t1 | MTR_4g100630 | 51.515 | 66 | 27 | 2 | 268 | 332 | 97 | 158 | 8.17e-17 | 81.6 |
| MS.gene39798.t1 | MTR_6g092540 | 52.308 | 65 | 28 | 1 | 268 | 332 | 99 | 160 | 4.35e-16 | 79.0 |
| MS.gene39798.t1 | MTR_8g101650 | 65.217 | 46 | 16 | 0 | 268 | 313 | 107 | 152 | 5.26e-16 | 78.6 |
| MS.gene39798.t1 | MTR_5g037080 | 67.391 | 46 | 15 | 0 | 268 | 313 | 104 | 149 | 5.72e-16 | 79.0 |
| MS.gene39798.t1 | MTR_4g107230 | 68.889 | 45 | 14 | 0 | 268 | 312 | 86 | 130 | 7.03e-16 | 78.2 |
| MS.gene39798.t1 | MTR_5g075790 | 39.200 | 125 | 54 | 3 | 223 | 338 | 73 | 184 | 1.21e-15 | 76.3 |
| MS.gene39798.t1 | MTR_4g015130 | 56.667 | 60 | 23 | 1 | 276 | 335 | 3 | 59 | 2.03e-15 | 71.6 |
| MS.gene39798.t1 | MTR_1g083180 | 39.683 | 126 | 55 | 7 | 234 | 341 | 13 | 135 | 2.96e-15 | 74.3 |
| MS.gene39798.t1 | MTR_2g090305 | 41.026 | 78 | 43 | 1 | 268 | 345 | 30 | 104 | 8.82e-15 | 73.2 |
| MS.gene39798.t1 | MTR_0036s0260 | 39.744 | 78 | 44 | 1 | 268 | 345 | 30 | 104 | 9.86e-15 | 73.2 |
| MS.gene39798.t1 | MTR_1g033620 | 55.932 | 59 | 22 | 2 | 282 | 339 | 21 | 76 | 8.54e-14 | 71.2 |
| MS.gene39798.t1 | MTR_3g070110 | 46.667 | 90 | 40 | 3 | 267 | 348 | 96 | 185 | 1.43e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39798.t1 | AT5G58900 | 64.286 | 70 | 21 | 2 | 268 | 336 | 143 | 209 | 7.50e-23 | 98.6 |
| MS.gene39798.t1 | AT5G08520 | 56.790 | 81 | 31 | 2 | 264 | 343 | 115 | 192 | 1.20e-22 | 98.2 |
| MS.gene39798.t1 | AT5G04760 | 60.526 | 76 | 27 | 1 | 259 | 334 | 92 | 164 | 1.54e-22 | 95.9 |
| MS.gene39798.t1 | AT5G01200 | 61.429 | 70 | 23 | 2 | 268 | 336 | 148 | 214 | 3.32e-21 | 93.6 |
| MS.gene39798.t1 | AT2G38090 | 57.692 | 78 | 28 | 3 | 261 | 336 | 135 | 209 | 1.49e-20 | 92.0 |
| MS.gene39798.t1 | AT1G49010 | 53.659 | 82 | 33 | 3 | 264 | 343 | 131 | 209 | 3.53e-20 | 91.3 |
| MS.gene39798.t1 | AT5G61620 | 54.545 | 77 | 31 | 2 | 260 | 335 | 101 | 174 | 5.71e-19 | 87.8 |
| MS.gene39798.t1 | AT3G11280 | 43.443 | 122 | 50 | 5 | 268 | 378 | 129 | 242 | 1.16e-18 | 85.9 |
| MS.gene39798.t1 | AT3G11280 | 43.443 | 122 | 50 | 5 | 268 | 378 | 129 | 242 | 1.16e-18 | 85.9 |
| MS.gene39798.t1 | AT5G23650 | 52.632 | 76 | 33 | 1 | 268 | 343 | 122 | 194 | 2.55e-18 | 86.3 |
| MS.gene39798.t1 | AT3G10580 | 45.098 | 102 | 49 | 3 | 246 | 346 | 74 | 169 | 6.65e-18 | 83.6 |
| MS.gene39798.t1 | AT3G10580 | 45.098 | 102 | 49 | 3 | 246 | 346 | 74 | 169 | 7.18e-18 | 84.3 |
| MS.gene39798.t1 | AT5G05790 | 55.000 | 80 | 28 | 3 | 264 | 338 | 128 | 204 | 1.29e-17 | 83.2 |
| MS.gene39798.t1 | AT5G05790 | 55.000 | 80 | 28 | 3 | 264 | 338 | 128 | 204 | 1.29e-17 | 83.2 |
| MS.gene39798.t1 | AT5G47390 | 46.591 | 88 | 41 | 3 | 268 | 353 | 98 | 181 | 1.89e-17 | 84.0 |
| MS.gene39798.t1 | AT1G70000 | 67.391 | 46 | 15 | 0 | 268 | 313 | 100 | 145 | 1.62e-16 | 79.7 |
| MS.gene39798.t1 | AT1G70000 | 67.391 | 46 | 15 | 0 | 268 | 313 | 100 | 145 | 1.62e-16 | 79.7 |
| MS.gene39798.t1 | AT5G56840 | 55.172 | 58 | 26 | 0 | 268 | 325 | 93 | 150 | 1.84e-16 | 79.0 |
| MS.gene39798.t1 | AT4G09450 | 53.623 | 69 | 29 | 1 | 268 | 336 | 93 | 158 | 3.59e-16 | 77.4 |
| MS.gene39798.t1 | AT3G16350 | 65.217 | 46 | 16 | 0 | 268 | 313 | 139 | 184 | 8.92e-16 | 79.3 |
| MS.gene39798.t1 | AT1G74840 | 68.889 | 45 | 14 | 0 | 268 | 312 | 98 | 142 | 1.49e-15 | 76.6 |
| MS.gene39798.t1 | AT1G19000 | 54.839 | 62 | 27 | 1 | 252 | 312 | 87 | 148 | 1.75e-15 | 77.0 |
| MS.gene39798.t1 | AT1G19000 | 54.839 | 62 | 27 | 1 | 252 | 312 | 87 | 148 | 1.75e-15 | 77.0 |
| MS.gene39798.t1 | AT1G74840 | 68.889 | 45 | 14 | 0 | 268 | 312 | 98 | 142 | 2.21e-15 | 76.6 |
| MS.gene39798.t1 | AT3G10590 | 40.816 | 98 | 49 | 3 | 243 | 335 | 83 | 176 | 5.62e-13 | 68.2 |
Find 107 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCATATCTTTCACATTT+TGG | 0.099316 | 5.4:-69265777 | None:intergenic |
| TCACCTTGTTCTTGGATATT+TGG | 0.151843 | 5.4:-69264471 | None:intergenic |
| TCAACATGATTCATAGGTTT+TGG | 0.219569 | 5.4:-69263781 | None:intergenic |
| CCTGCTGCTGCCGGGGATAC+AGG | 0.250754 | 5.4:-69264345 | None:intergenic |
| CTGTCCAATGCCCTTTCCTT+GGG | 0.257949 | 5.4:-69265404 | None:intergenic |
| GATGTTCCTGTGTTGGTTAT+TGG | 0.258752 | 5.4:+69263721 | MS.gene39798:CDS |
| CTTGGGGCATGACTTTCTTC+TGG | 0.281577 | 5.4:-69265387 | None:intergenic |
| TTCTCAAGTTTGTTCATATC+AGG | 0.295923 | 5.4:-69266162 | None:intergenic |
| TGTTGAGAATGTTTCTGTTC+AGG | 0.297487 | 5.4:+69263798 | MS.gene39798:CDS |
| TCACATGGTCACCTTGTTCT+TGG | 0.300281 | 5.4:-69264479 | None:intergenic |
| GTCTGTTGCATTCCTTTAGA+AGG | 0.313430 | 5.4:-69265919 | None:intergenic |
| TCTGTCCAATGCCCTTTCCT+TGG | 0.314383 | 5.4:-69265405 | None:intergenic |
| CTGAACATGTTTGGCATCAT+TGG | 0.316454 | 5.4:-69264394 | None:intergenic |
| TGGATATTTGGCCTTCCATT+TGG | 0.317326 | 5.4:-69264459 | None:intergenic |
| CCACCAAAATGTGAAAGATA+TGG | 0.352224 | 5.4:+69265774 | MS.gene39798:CDS |
| TGAGAAGATGCGCAACTTGT+TGG | 0.359768 | 5.4:+69266179 | MS.gene39798:CDS |
| CACCGGAGGCTGAACATGTT+TGG | 0.362724 | 5.4:-69264403 | None:intergenic |
| ACATTCTCAACATGATTCAT+AGG | 0.366509 | 5.4:-69263787 | None:intergenic |
| TTGGATAAAGCAACACCAAC+TGG | 0.371101 | 5.4:-69266125 | None:intergenic |
| AAACAGAAATCAAACGGTTC+TGG | 0.380690 | 5.4:+69264189 | MS.gene39798:intron |
| TTTCTGTTGCGCTTGGGGCC+TGG | 0.382290 | 5.4:-69264258 | None:intergenic |
| TGCTATGCTCAGAGGGATCT+TGG | 0.382368 | 5.4:-69265230 | None:intergenic |
| AACCTTGTCCTGCTGCTGCC+GGG | 0.402092 | 5.4:-69264353 | None:intergenic |
| TTTGTGTTTCTGTTGCGCTT+GGG | 0.412088 | 5.4:-69264264 | None:intergenic |
| AAATATTTCAAAAGAATTTG+TGG | 0.425853 | 5.4:+69265702 | MS.gene39798:CDS |
| TTAGTGCTCCTAAGTCTTCA+AGG | 0.427365 | 5.4:+69263668 | MS.gene39798:CDS |
| ATTTGTGTTTCTGTTGCGCT+TGG | 0.430827 | 5.4:-69264265 | None:intergenic |
| TCCTTTAGTCACTGCTCCTA+TGG | 0.430956 | 5.4:+69266032 | MS.gene39798:CDS |
| GGATTCTCGCCATTAGGATA+AGG | 0.435944 | 5.4:-69264318 | None:intergenic |
| TATGCTGTTAATTATCCAAA+TGG | 0.436533 | 5.4:+69264444 | MS.gene39798:CDS |
| GGCTTAGGATTCTCGCCATT+AGG | 0.439906 | 5.4:-69264324 | None:intergenic |
| TGTGAAAGATATGGAGAAGA+AGG | 0.441203 | 5.4:+69265783 | MS.gene39798:CDS |
| GAACAACAACAGGAGAAAAC+TGG | 0.441684 | 5.4:+69265255 | MS.gene39798:CDS |
| AATCGGTTCTACAATTCCTT+CGG | 0.444800 | 5.4:+69265987 | MS.gene39798:CDS |
| GGTGATGGCATCTTATTCTT+CGG | 0.445274 | 5.4:-69264222 | None:intergenic |
| ATTGTTCTTGTTGTTTAAGA+TGG | 0.446908 | 5.4:-69266088 | None:intergenic |
| AAACCTTGTCCTGCTGCTGC+CGG | 0.447814 | 5.4:-69264354 | None:intergenic |
| ACCACCCGACTCAATGATAT+CGG | 0.449690 | 5.4:-69265280 | None:intergenic |
| ATGTTTGCCCTGGCAGGAAA+AGG | 0.462283 | 5.4:-69264525 | None:intergenic |
| GCGACGATGCCTTATCCTAA+TGG | 0.462440 | 5.4:+69264309 | MS.gene39798:CDS |
| TTGGTGTTGCTTTATCCAAT+CGG | 0.462526 | 5.4:+69266129 | MS.gene39798:CDS |
| CCTGTATCCCCGGCAGCAGC+AGG | 0.464792 | 5.4:+69264345 | MS.gene39798:CDS |
| GGCTTTCGATAGCGCGGTGA+TGG | 0.464836 | 5.4:-69264237 | None:intergenic |
| GCTCATTTAAATCAATTTGA+AGG | 0.475975 | 5.4:-69265197 | None:intergenic |
| TCAAATTGATTTAAATGAGC+CGG | 0.477484 | 5.4:+69265200 | MS.gene39798:CDS |
| TGGTTATTGGAACCAAGTCT+TGG | 0.480410 | 5.4:+69263734 | MS.gene39798:CDS |
| TTGTGTTTCTGTTGCGCTTG+GGG | 0.482706 | 5.4:-69264263 | None:intergenic |
| GCATAGCATGGAACAACAAC+AGG | 0.485938 | 5.4:+69265245 | MS.gene39798:CDS |
| GGTCTCTTCCTTGAAGACTT+AGG | 0.489770 | 5.4:-69263676 | None:intergenic |
| TCACCGCGCTATCGAAAGCC+AGG | 0.491564 | 5.4:+69264240 | MS.gene39798:CDS |
| GCTGCCGGGGATACAGGCTT+AGG | 0.492601 | 5.4:-69264339 | None:intergenic |
| AAAGTCATGCCCCAAGGAAA+GGG | 0.493395 | 5.4:+69265394 | MS.gene39798:CDS |
| GGTTATTGGAACCAAGTCTT+GGG | 0.493710 | 5.4:+69263735 | MS.gene39798:CDS |
| ATAGGCATGTTTGCCCTGGC+AGG | 0.493753 | 5.4:-69264531 | None:intergenic |
| ATGTTGTGCTTGCTGCCAAT+CGG | 0.496477 | 5.4:+69265970 | MS.gene39798:CDS |
| CAAAGTGTGATTCCTTCTAA+AGG | 0.497432 | 5.4:+69265907 | MS.gene39798:CDS |
| GAATCCTAAGCCTGTATCCC+CGG | 0.504373 | 5.4:+69264335 | MS.gene39798:CDS |
| TGCCAAACATGTTCAGCCTC+CGG | 0.513848 | 5.4:+69264401 | MS.gene39798:CDS |
| TAATTAACAGCATAAGCATT+CGG | 0.516489 | 5.4:-69264435 | None:intergenic |
| ATGCCCCAAGGAAAGGGCAT+TGG | 0.524782 | 5.4:+69265400 | MS.gene39798:CDS |
| GCATGGCTAGCAATTTGAGT+TGG | 0.525594 | 5.4:-69265736 | None:intergenic |
| AGAAAGAGCTGCCCAAGACT+TGG | 0.525727 | 5.4:-69263746 | None:intergenic |
| GAAAGTCATGCCCCAAGGAA+AGG | 0.527463 | 5.4:+69265393 | MS.gene39798:CDS |
| GTGATTAAACAGAAATCAAA+CGG | 0.527832 | 5.4:+69264183 | MS.gene39798:intron |
| GTCTCATGTTGTTGTTCCAT+AGG | 0.529730 | 5.4:-69266048 | None:intergenic |
| TTGCATAGGCATGTTTGCCC+TGG | 0.530471 | 5.4:-69264535 | None:intergenic |
| GGCACCGATATCATTGAGTC+GGG | 0.531762 | 5.4:+69265276 | MS.gene39798:CDS |
| CAAGGTGACCATGTGAATCA+TGG | 0.533701 | 5.4:+69264486 | MS.gene39798:CDS |
| TGTTCCATGCTATGCTCAGA+GGG | 0.536332 | 5.4:-69265237 | None:intergenic |
| ATCAGAGTTTAGAATTGCAA+TGG | 0.548775 | 5.4:-69265304 | None:intergenic |
| TTTAAGATGGCAGTGTCTTG+AGG | 0.553601 | 5.4:-69266075 | None:intergenic |
| GGATAAGGCATCGTCGCCAC+AGG | 0.553867 | 5.4:-69264303 | None:intergenic |
| ATTTAAATCAATTTGAAGGA+GGG | 0.554059 | 5.4:-69265193 | None:intergenic |
| TCCATAGGAGCAGTGACTAA+AGG | 0.557140 | 5.4:-69266033 | None:intergenic |
| TTCGGATCTCCTTGCACCGG+AGG | 0.558249 | 5.4:-69264417 | None:intergenic |
| TGTCCAATGCCCTTTCCTTG+GGG | 0.558952 | 5.4:-69265403 | None:intergenic |
| CATGTTCAGCCTCCGGTGCA+AGG | 0.562364 | 5.4:+69264408 | MS.gene39798:CDS |
| TTGGCATCATTGGCATGAGC+AGG | 0.563369 | 5.4:-69264384 | None:intergenic |
| ACCTTGTCCTGCTGCTGCCG+GGG | 0.566255 | 5.4:-69264352 | None:intergenic |
| TTGTTCCATGCTATGCTCAG+AGG | 0.567759 | 5.4:-69265238 | None:intergenic |
| GAGGGATCTTGGACTGAAGC+CGG | 0.570243 | 5.4:-69265219 | None:intergenic |
| CATTTAAATCAATTTGAAGG+AGG | 0.570848 | 5.4:-69265194 | None:intergenic |
| TCCCCGGCAGCAGCAGGACA+AGG | 0.572616 | 5.4:+69264351 | MS.gene39798:CDS |
| TCAGGAAGTGTAGAACCGAT+TGG | 0.577352 | 5.4:-69266144 | None:intergenic |
| GCATCATTGGCATGAGCAGG+TGG | 0.581815 | 5.4:-69264381 | None:intergenic |
| TGGCACCGATATCATTGAGT+CGG | 0.583638 | 5.4:+69265275 | MS.gene39798:CDS |
| ATTGGCAGCAAGCACAACAT+AGG | 0.587278 | 5.4:-69265967 | None:intergenic |
| ACACTTTGTAGCTCAACTGA+AGG | 0.589388 | 5.4:-69265892 | None:intergenic |
| AAGTGTTGATGTTCCTGTGT+TGG | 0.595689 | 5.4:+69263714 | MS.gene39798:CDS |
| AGATCCCTCTGAGCATAGCA+TGG | 0.596307 | 5.4:+69265233 | MS.gene39798:CDS |
| TGGATAAAGCAACACCAACT+GGG | 0.597123 | 5.4:-69266124 | None:intergenic |
| CTGTTAATTATCCAAATGGA+AGG | 0.601168 | 5.4:+69264448 | MS.gene39798:CDS |
| GAAGGAATTGTAGAACCGAT+TGG | 0.605792 | 5.4:-69265985 | None:intergenic |
| ATTAAACAAGAATGACACAT+TGG | 0.608999 | 5.4:+69265837 | MS.gene39798:CDS |
| ACCGATATCATTGAGTCGGG+TGG | 0.615037 | 5.4:+69265279 | MS.gene39798:CDS |
| GCATTCGGATCTCCTTGCAC+CGG | 0.618195 | 5.4:-69264420 | None:intergenic |
| ATCGTCGCCACAGGAAAGTG+AGG | 0.619216 | 5.4:-69264294 | None:intergenic |
| CAGAAGAAAGTCATGCCCCA+AGG | 0.636413 | 5.4:+69265388 | MS.gene39798:CDS |
| GTGACCATGTGAATCATGGT+CGG | 0.644274 | 5.4:+69264490 | MS.gene39798:CDS |
| AAGATGGCAGTGTCTTGAGG+AGG | 0.644314 | 5.4:-69266072 | None:intergenic |
| AGGCCAAATATCCAAGAACA+AGG | 0.648452 | 5.4:+69264468 | MS.gene39798:CDS |
| TGACAACTTGCAAACCCAGT+TGG | 0.648867 | 5.4:+69266110 | MS.gene39798:CDS |
| GGGCCTGGCTTTCGATAGCG+CGG | 0.653594 | 5.4:-69264243 | None:intergenic |
| AAGGAAAGGGCATTGGACAG+AGG | 0.658250 | 5.4:+69265407 | MS.gene39798:CDS |
| TTGGTTCCAATAACCAACAC+AGG | 0.668427 | 5.4:-69263727 | None:intergenic |
| TGACACGCCTCACTTTCCTG+TGG | 0.696402 | 5.4:+69264287 | MS.gene39798:CDS |
| GATGCCGACCATGATTCACA+TGG | 0.766610 | 5.4:-69264494 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAACTTTCAAACAT+AGG | - | chr5.4:69265471-69265490 | None:intergenic | 15.0% |
| !! | AAATATTTCAAAAGAATTTG+TGG | + | chr5.4:69265702-69265721 | MS.gene39798:CDS | 15.0% |
| !! | ATTTAAATCAATTTGAAGGA+GGG | - | chr5.4:69265196-69265215 | None:intergenic | 20.0% |
| !! | TAATTCAAATTGGATGAAAT+TGG | + | chr5.4:69265104-69265123 | MS.gene39798:intron | 20.0% |
| !! | TTCAAAAAATATTATGCATG+TGG | + | chr5.4:69265078-69265097 | MS.gene39798:intron | 20.0% |
| !!! | ATATATAGGTTGTTTTTGAA+GGG | + | chr5.4:69265649-69265668 | MS.gene39798:intron | 20.0% |
| !!! | ATTTTCTTAACTTTCATGAT+TGG | + | chr5.4:69264947-69264966 | MS.gene39798:intron | 20.0% |
| !!! | CATGCATAATATTTTTTGAA+TGG | - | chr5.4:69265078-69265097 | None:intergenic | 20.0% |
| !!! | TATATATAGGTTGTTTTTGA+AGG | + | chr5.4:69265648-69265667 | MS.gene39798:intron | 20.0% |
| !!! | TATTTTTTGTATAGAAAGCA+TGG | + | chr5.4:69265146-69265165 | MS.gene39798:intron | 20.0% |
| ! | ATTAAACAAGAATGACACAT+TGG | + | chr5.4:69265837-69265856 | MS.gene39798:CDS | 25.0% |
| ! | ATTATGATATCTTCTCGTTA+TGG | + | chr5.4:69264892-69264911 | MS.gene39798:intron | 25.0% |
| ! | CACATTCATTCTCTATATAT+AGG | + | chr5.4:69265635-69265654 | MS.gene39798:intron | 25.0% |
| ! | CATGTGGATATAATTCAAAT+TGG | + | chr5.4:69265094-69265113 | MS.gene39798:intron | 25.0% |
| ! | CATTTAAATCAATTTGAAGG+AGG | - | chr5.4:69265197-69265216 | None:intergenic | 25.0% |
| ! | GCTCATTTAAATCAATTTGA+AGG | - | chr5.4:69265200-69265219 | None:intergenic | 25.0% |
| ! | GTGATTAAACAGAAATCAAA+CGG | + | chr5.4:69264183-69264202 | MS.gene39798:intron | 25.0% |
| ! | TAAACAACGAGTGAAAAATA+TGG | + | chr5.4:69264029-69264048 | MS.gene39798:intron | 25.0% |
| ! | TAATTAACAGCATAAGCATT+CGG | - | chr5.4:69264438-69264457 | None:intergenic | 25.0% |
| ! | TATGCTGTTAATTATCCAAA+TGG | + | chr5.4:69264444-69264463 | MS.gene39798:CDS | 25.0% |
| ! | TCTACAATATTCTTAACTCT+GGG | + | chr5.4:69264115-69264134 | MS.gene39798:intron | 25.0% |
| ! | TGAAAGTTAAGAAAATTACC+TGG | - | chr5.4:69264943-69264962 | None:intergenic | 25.0% |
| ! | TGTTAAGCTAAATGAATAAG+TGG | - | chr5.4:69264614-69264633 | None:intergenic | 25.0% |
| ! | TTCTACAATATTCTTAACTC+TGG | + | chr5.4:69264114-69264133 | MS.gene39798:intron | 25.0% |
| ! | TTCTTATGCTTGCAATAATA+TGG | - | chr5.4:69263966-69263985 | None:intergenic | 25.0% |
| !! | TCAAATTGATTTAAATGAGC+CGG | + | chr5.4:69265200-69265219 | MS.gene39798:CDS | 25.0% |
| !! | TTAGTGTAATGTGATTTTGA+TGG | + | chr5.4:69263885-69263904 | MS.gene39798:intron | 25.0% |
| !!! | AGGCATAATTGATTTGATTA+AGG | + | chr5.4:69264986-69265005 | MS.gene39798:intron | 25.0% |
| !!! | ATTGTTCTTGTTGTTTAAGA+TGG | - | chr5.4:69266091-69266110 | None:intergenic | 25.0% |
| !!! | TATATAGGTTGTTTTTGAAG+GGG | + | chr5.4:69265650-69265669 | MS.gene39798:intron | 25.0% |
| !!! | TTGGTGGATAAAGTATTTTT+GGG | - | chr5.4:69265761-69265780 | None:intergenic | 25.0% |
| !!! | TTTGGTGGATAAAGTATTTT+TGG | - | chr5.4:69265762-69265781 | None:intergenic | 25.0% |
| AATTGCATGAAGTGCATATA+TGG | - | chr5.4:69264589-69264608 | None:intergenic | 30.0% | |
| ACATTCTCAACATGATTCAT+AGG | - | chr5.4:69263790-69263809 | None:intergenic | 30.0% | |
| ACTCAATGAAGTTCATTCAA+AGG | - | chr5.4:69264654-69264673 | None:intergenic | 30.0% | |
| AGAAGGAGAAAAAGAGAAAA+AGG | + | chr5.4:69265800-69265819 | MS.gene39798:CDS | 30.0% | |
| CTGTTAATTATCCAAATGGA+AGG | + | chr5.4:69264448-69264467 | MS.gene39798:CDS | 30.0% | |
| TTACTTTGATACCATTGAAG+TGG | + | chr5.4:69264823-69264842 | MS.gene39798:intron | 30.0% | |
| TTTAATCACAGATCCATACA+CGG | - | chr5.4:69264172-69264191 | None:intergenic | 30.0% | |
| ! | ATCAGAGTTTAGAATTGCAA+TGG | - | chr5.4:69265307-69265326 | None:intergenic | 30.0% |
| ! | GAAATTTTACTGTGTTGCAT+AGG | - | chr5.4:69264552-69264571 | None:intergenic | 30.0% |
| ! | TCAACATGATTCATAGGTTT+TGG | - | chr5.4:69263784-69263803 | None:intergenic | 30.0% |
| ! | TCTCCATATCTTTCACATTT+TGG | - | chr5.4:69265780-69265799 | None:intergenic | 30.0% |
| ! | TTCTCAAGTTTGTTCATATC+AGG | - | chr5.4:69266165-69266184 | None:intergenic | 30.0% |
| !!! | CATCATTTTTTGAGTAAACC+GGG | + | chr5.4:69265009-69265028 | MS.gene39798:intron | 30.0% |
| !!! | GCATCATTTTTTGAGTAAAC+CGG | + | chr5.4:69265008-69265027 | MS.gene39798:intron | 30.0% |
| !!! | TATTGTTTTTTTCCCTTCGA+TGG | + | chr5.4:69264077-69264096 | MS.gene39798:intron | 30.0% |
| AAACAGAAATCAAACGGTTC+TGG | + | chr5.4:69264189-69264208 | MS.gene39798:intron | 35.0% | |
| AATACCCAAAAAAGCAACAG+AGG | - | chr5.4:69264763-69264782 | None:intergenic | 35.0% | |
| ATACCCAAAAAAGCAACAGA+GGG | - | chr5.4:69264762-69264781 | None:intergenic | 35.0% | |
| CAAAGTGTGATTCCTTCTAA+AGG | + | chr5.4:69265907-69265926 | MS.gene39798:CDS | 35.0% | |
| CCACCAAAATGTGAAAGATA+TGG | + | chr5.4:69265774-69265793 | MS.gene39798:CDS | 35.0% | |
| GGGATGAAAAAACATGGAAA+GGG | + | chr5.4:69265670-69265689 | MS.gene39798:CDS | 35.0% | |
| TCACCTTGTTCTTGGATATT+TGG | - | chr5.4:69264474-69264493 | None:intergenic | 35.0% | |
| TGTGAAAGATATGGAGAAGA+AGG | + | chr5.4:69265783-69265802 | MS.gene39798:CDS | 35.0% | |
| TTGAAGGGGATGAAAAAACA+TGG | + | chr5.4:69265664-69265683 | MS.gene39798:CDS | 35.0% | |
| ! | AATCGGTTCTACAATTCCTT+CGG | + | chr5.4:69265987-69266006 | MS.gene39798:CDS | 35.0% |
| ! | ACACTTTTCTCTTCAACACT+AGG | - | chr5.4:69263700-69263719 | None:intergenic | 35.0% |
| ! | CCATATCTTTCACATTTTGG+TGG | - | chr5.4:69265777-69265796 | None:intergenic | 35.0% |
| ! | TCTCGTTATGGTTCTGTAAT+TGG | + | chr5.4:69264904-69264923 | MS.gene39798:intron | 35.0% |
| ! | TGTTGAGAATGTTTCTGTTC+AGG | + | chr5.4:69263798-69263817 | MS.gene39798:CDS | 35.0% |
| ! | TTGGCTAGTTCATCTGATTA+AGG | + | chr5.4:69264966-69264985 | MS.gene39798:intron | 35.0% |
| !! | ACAGCTTTTATTTCCATCGA+AGG | - | chr5.4:69264093-69264112 | None:intergenic | 35.0% |
| !! | CAGCTTTTATTTCCATCGAA+GGG | - | chr5.4:69264092-69264111 | None:intergenic | 35.0% |
| !! | CTGTAATTGGTTTGAGTAAC+TGG | + | chr5.4:69264917-69264936 | MS.gene39798:intron | 35.0% |
| !! | TTGGTGTTGCTTTATCCAAT+CGG | + | chr5.4:69266129-69266148 | MS.gene39798:CDS | 35.0% |
| !!! | GGATAAAGTATTTTTGGGCA+TGG | - | chr5.4:69265756-69265775 | None:intergenic | 35.0% |
| !!! | TAACCCTCTGTTGCTTTTTT+GGG | + | chr5.4:69264756-69264775 | MS.gene39798:intron | 35.0% |
| !!! | TTAACCCTCTGTTGCTTTTT+TGG | + | chr5.4:69264755-69264774 | MS.gene39798:intron | 35.0% |
| ACACTTTGTAGCTCAACTGA+AGG | - | chr5.4:69265895-69265914 | None:intergenic | 40.0% | |
| AGATCCATACACGGAAAATC+AGG | - | chr5.4:69264163-69264182 | None:intergenic | 40.0% | |
| AGGCCAAATATCCAAGAACA+AGG | + | chr5.4:69264468-69264487 | MS.gene39798:CDS | 40.0% | |
| CTGAACATGTTTGGCATCAT+TGG | - | chr5.4:69264397-69264416 | None:intergenic | 40.0% | |
| GAACAACAACAGGAGAAAAC+TGG | + | chr5.4:69265255-69265274 | MS.gene39798:CDS | 40.0% | |
| GAAGGAATTGTAGAACCGAT+TGG | - | chr5.4:69265988-69266007 | None:intergenic | 40.0% | |
| GCAACTAAAAGCCACTTCAA+TGG | - | chr5.4:69264837-69264856 | None:intergenic | 40.0% | |
| GGGGATGAAAAAACATGGAA+AGG | + | chr5.4:69265669-69265688 | MS.gene39798:CDS | 40.0% | |
| GGTTATTGGAACCAAGTCTT+GGG | + | chr5.4:69263735-69263754 | MS.gene39798:CDS | 40.0% | |
| GTCTGTTGCATTCCTTTAGA+AGG | - | chr5.4:69265922-69265941 | None:intergenic | 40.0% | |
| TGCATGAAGTGCATATATGG+AGG | - | chr5.4:69264586-69264605 | None:intergenic | 40.0% | |
| TGGATAAAGCAACACCAACT+GGG | - | chr5.4:69266127-69266146 | None:intergenic | 40.0% | |
| TGGTTATTGGAACCAAGTCT+TGG | + | chr5.4:69263734-69263753 | MS.gene39798:CDS | 40.0% | |
| TTAGTGCTCCTAAGTCTTCA+AGG | + | chr5.4:69263668-69263687 | MS.gene39798:CDS | 40.0% | |
| TTGGATAAAGCAACACCAAC+TGG | - | chr5.4:69266128-69266147 | None:intergenic | 40.0% | |
| TTGGTTCCAATAACCAACAC+AGG | - | chr5.4:69263730-69263749 | None:intergenic | 40.0% | |
| ! | ATTTGTGTTTCTGTTGCGCT+TGG | - | chr5.4:69264268-69264287 | None:intergenic | 40.0% |
| ! | GGTGATGGCATCTTATTCTT+CGG | - | chr5.4:69264225-69264244 | None:intergenic | 40.0% |
| ! | GTCTCATGTTGTTGTTCCAT+AGG | - | chr5.4:69266051-69266070 | None:intergenic | 40.0% |
| ! | TGGATATTTGGCCTTCCATT+TGG | - | chr5.4:69264462-69264481 | None:intergenic | 40.0% |
| ! | TTTAAGATGGCAGTGTCTTG+AGG | - | chr5.4:69266078-69266097 | None:intergenic | 40.0% |
| ! | TTTGCCTGATTTTCCGTGTA+TGG | + | chr5.4:69264156-69264175 | MS.gene39798:intron | 40.0% |
| ! | TTTGTGTTTCTGTTGCGCTT+GGG | - | chr5.4:69264267-69264286 | None:intergenic | 40.0% |
| !! | AAGTGTTGATGTTCCTGTGT+TGG | + | chr5.4:69263714-69263733 | MS.gene39798:CDS | 40.0% |
| !! | GATGTTCCTGTGTTGGTTAT+TGG | + | chr5.4:69263721-69263740 | MS.gene39798:CDS | 40.0% |
| AAAAACATGGAAAGGGACGC+TGG | + | chr5.4:69265677-69265696 | MS.gene39798:CDS | 45.0% | |
| AAAGTCATGCCCCAAGGAAA+GGG | + | chr5.4:69265394-69265413 | MS.gene39798:CDS | 45.0% | |
| ACCACCCGACTCAATGATAT+CGG | - | chr5.4:69265283-69265302 | None:intergenic | 45.0% | |
| ATTGGCAGCAAGCACAACAT+AGG | - | chr5.4:69265970-69265989 | None:intergenic | 45.0% | |
| CAAGGTGACCATGTGAATCA+TGG | + | chr5.4:69264486-69264505 | MS.gene39798:CDS | 45.0% | |
| GCATAGCATGGAACAACAAC+AGG | + | chr5.4:69265245-69265264 | MS.gene39798:CDS | 45.0% | |
| GCATGGCTAGCAATTTGAGT+TGG | - | chr5.4:69265739-69265758 | None:intergenic | 45.0% | |
| GCGAGTCGACAAATCTGTTT+AGG | + | chr5.4:69264051-69264070 | MS.gene39798:intron | 45.0% | |
| GGATTCTCGCCATTAGGATA+AGG | - | chr5.4:69264321-69264340 | None:intergenic | 45.0% | |
| GGTCTCTTCCTTGAAGACTT+AGG | - | chr5.4:69263679-69263698 | None:intergenic | 45.0% | |
| GTGACCATGTGAATCATGGT+CGG | + | chr5.4:69264490-69264509 | MS.gene39798:CDS | 45.0% | |
| TCACATGGTCACCTTGTTCT+TGG | - | chr5.4:69264482-69264501 | None:intergenic | 45.0% | |
| TCCATAGGAGCAGTGACTAA+AGG | - | chr5.4:69266036-69266055 | None:intergenic | 45.0% | |
| TCCTTTAGTCACTGCTCCTA+TGG | + | chr5.4:69266032-69266051 | MS.gene39798:CDS | 45.0% | |
| TGACAACTTGCAAACCCAGT+TGG | + | chr5.4:69266110-69266129 | MS.gene39798:CDS | 45.0% | |
| TGAGAAGATGCGCAACTTGT+TGG | + | chr5.4:69266179-69266198 | MS.gene39798:CDS | 45.0% | |
| TGTTCCATGCTATGCTCAGA+GGG | - | chr5.4:69265240-69265259 | None:intergenic | 45.0% | |
| TTGTTCCATGCTATGCTCAG+AGG | - | chr5.4:69265241-69265260 | None:intergenic | 45.0% | |
| ! | ATCAAAGACCTTTTCCTGCC+AGG | + | chr5.4:69264517-69264536 | MS.gene39798:CDS | 45.0% |
| ! | ATGTTGTGCTTGCTGCCAAT+CGG | + | chr5.4:69265970-69265989 | MS.gene39798:CDS | 45.0% |
| ! | TCAAAGACCTTTTCCTGCCA+GGG | + | chr5.4:69264518-69264537 | MS.gene39798:CDS | 45.0% |
| ! | TCAGGAAGTGTAGAACCGAT+TGG | - | chr5.4:69266147-69266166 | None:intergenic | 45.0% |
| ! | TTGTGTTTCTGTTGCGCTTG+GGG | - | chr5.4:69264266-69264285 | None:intergenic | 45.0% |
| !! | ATTGGTTTGAGTAACTGGCC+AGG | + | chr5.4:69264922-69264941 | MS.gene39798:intron | 45.0% |
| !! | TCGTTTTGTTGCTGAACCGA+AGG | - | chr5.4:69266006-69266025 | None:intergenic | 45.0% |
| !! | TGGCACCGATATCATTGAGT+CGG | + | chr5.4:69265275-69265294 | MS.gene39798:CDS | 45.0% |
| AAGATGGCAGTGTCTTGAGG+AGG | - | chr5.4:69266075-69266094 | None:intergenic | 50.0% | |
| ACCGATATCATTGAGTCGGG+TGG | + | chr5.4:69265279-69265298 | MS.gene39798:CDS | 50.0% | |
| AGAAAGAGCTGCCCAAGACT+TGG | - | chr5.4:69263749-69263768 | None:intergenic | 50.0% | |
| AGATCCCTCTGAGCATAGCA+TGG | + | chr5.4:69265233-69265252 | MS.gene39798:CDS | 50.0% | |
| ATGTTTGCCCTGGCAGGAAA+AGG | - | chr5.4:69264528-69264547 | None:intergenic | 50.0% | |
| CAGAAGAAAGTCATGCCCCA+AGG | + | chr5.4:69265388-69265407 | MS.gene39798:CDS | 50.0% | |
| CTGTCCAATGCCCTTTCCTT+GGG | - | chr5.4:69265407-69265426 | None:intergenic | 50.0% | |
| CTTGGGGCATGACTTTCTTC+TGG | - | chr5.4:69265390-69265409 | None:intergenic | 50.0% | |
| GAAAGTCATGCCCCAAGGAA+AGG | + | chr5.4:69265393-69265412 | MS.gene39798:CDS | 50.0% | |
| GAATCCTAAGCCTGTATCCC+CGG | + | chr5.4:69264335-69264354 | MS.gene39798:CDS | 50.0% | |
| GAGTAAACCGGGTGATGCTA+GGG | + | chr5.4:69265020-69265039 | MS.gene39798:intron | 50.0% | |
| GATGCCGACCATGATTCACA+TGG | - | chr5.4:69264497-69264516 | None:intergenic | 50.0% | |
| GCGACGATGCCTTATCCTAA+TGG | + | chr5.4:69264309-69264328 | MS.gene39798:CDS | 50.0% | |
| GGCTTAGGATTCTCGCCATT+AGG | - | chr5.4:69264327-69264346 | None:intergenic | 50.0% | |
| TCTGTCCAATGCCCTTTCCT+TGG | - | chr5.4:69265408-69265427 | None:intergenic | 50.0% | |
| TCTTAGTCCCTAGCATCACC+CGG | - | chr5.4:69265030-69265049 | None:intergenic | 50.0% | |
| TGAGTAAACCGGGTGATGCT+AGG | + | chr5.4:69265019-69265038 | MS.gene39798:intron | 50.0% | |
| TGCCAAACATGTTCAGCCTC+CGG | + | chr5.4:69264401-69264420 | MS.gene39798:CDS | 50.0% | |
| TGCTATGCTCAGAGGGATCT+TGG | - | chr5.4:69265233-69265252 | None:intergenic | 50.0% | |
| TGTCCAATGCCCTTTCCTTG+GGG | - | chr5.4:69265406-69265425 | None:intergenic | 50.0% | |
| TTGCATAGGCATGTTTGCCC+TGG | - | chr5.4:69264538-69264557 | None:intergenic | 50.0% | |
| TTGGCATCATTGGCATGAGC+AGG | - | chr5.4:69264387-69264406 | None:intergenic | 50.0% | |
| !! | AAGGAAAGGGCATTGGACAG+AGG | + | chr5.4:69265407-69265426 | MS.gene39798:CDS | 50.0% |
| !! | GGCACCGATATCATTGAGTC+GGG | + | chr5.4:69265276-69265295 | MS.gene39798:CDS | 50.0% |
| AAACCTTGTCCTGCTGCTGC+CGG | - | chr5.4:69264357-69264376 | None:intergenic | 55.0% | |
| ATAGGCATGTTTGCCCTGGC+AGG | - | chr5.4:69264534-69264553 | None:intergenic | 55.0% | |
| ATCGTCGCCACAGGAAAGTG+AGG | - | chr5.4:69264297-69264316 | None:intergenic | 55.0% | |
| CACCGGAGGCTGAACATGTT+TGG | - | chr5.4:69264406-69264425 | None:intergenic | 55.0% | |
| GAGGGATCTTGGACTGAAGC+CGG | - | chr5.4:69265222-69265241 | None:intergenic | 55.0% | |
| GCATCATTGGCATGAGCAGG+TGG | - | chr5.4:69264384-69264403 | None:intergenic | 55.0% | |
| GCATTCGGATCTCCTTGCAC+CGG | - | chr5.4:69264423-69264442 | None:intergenic | 55.0% | |
| TGACACGCCTCACTTTCCTG+TGG | + | chr5.4:69264287-69264306 | MS.gene39798:CDS | 55.0% | |
| ! | ATGCCCCAAGGAAAGGGCAT+TGG | + | chr5.4:69265400-69265419 | MS.gene39798:CDS | 55.0% |
| AACCTTGTCCTGCTGCTGCC+GGG | - | chr5.4:69264356-69264375 | None:intergenic | 60.0% | |
| CATGTTCAGCCTCCGGTGCA+AGG | + | chr5.4:69264408-69264427 | MS.gene39798:CDS | 60.0% | |
| GGCTTTCGATAGCGCGGTGA+TGG | - | chr5.4:69264240-69264259 | None:intergenic | 60.0% | |
| TCACCGCGCTATCGAAAGCC+AGG | + | chr5.4:69264240-69264259 | MS.gene39798:CDS | 60.0% | |
| TTCGGATCTCCTTGCACCGG+AGG | - | chr5.4:69264420-69264439 | None:intergenic | 60.0% | |
| TTTCTGTTGCGCTTGGGGCC+TGG | - | chr5.4:69264261-69264280 | None:intergenic | 60.0% | |
| !! | GGATAAGGCATCGTCGCCAC+AGG | - | chr5.4:69264306-69264325 | None:intergenic | 60.0% |
| ACCTTGTCCTGCTGCTGCCG+GGG | - | chr5.4:69264355-69264374 | None:intergenic | 65.0% | |
| GCTGCCGGGGATACAGGCTT+AGG | - | chr5.4:69264342-69264361 | None:intergenic | 65.0% | |
| ! | GGGCCTGGCTTTCGATAGCG+CGG | - | chr5.4:69264246-69264265 | None:intergenic | 65.0% |
| CCTGCTGCTGCCGGGGATAC+AGG | - | chr5.4:69264348-69264367 | None:intergenic | 70.0% | |
| CCTGTATCCCCGGCAGCAGC+AGG | + | chr5.4:69264345-69264364 | MS.gene39798:CDS | 70.0% | |
| TCCCCGGCAGCAGCAGGACA+AGG | + | chr5.4:69264351-69264370 | MS.gene39798:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 69263646 | 69266215 | 69263646 | ID=MS.gene39798 |
| chr5.4 | mRNA | 69263646 | 69266215 | 69263646 | ID=MS.gene39798.t1;Parent=MS.gene39798 |
| chr5.4 | exon | 69263646 | 69263819 | 69263646 | ID=MS.gene39798.t1.exon1;Parent=MS.gene39798.t1 |
| chr5.4 | CDS | 69263646 | 69263819 | 69263646 | ID=cds.MS.gene39798.t1;Parent=MS.gene39798.t1 |
| chr5.4 | exon | 69264195 | 69264561 | 69264195 | ID=MS.gene39798.t1.exon2;Parent=MS.gene39798.t1 |
| chr5.4 | CDS | 69264195 | 69264561 | 69264195 | ID=cds.MS.gene39798.t1;Parent=MS.gene39798.t1 |
| chr5.4 | exon | 69265160 | 69265439 | 69265160 | ID=MS.gene39798.t1.exon3;Parent=MS.gene39798.t1 |
| chr5.4 | CDS | 69265160 | 69265439 | 69265160 | ID=cds.MS.gene39798.t1;Parent=MS.gene39798.t1 |
| chr5.4 | exon | 69265657 | 69266215 | 69265657 | ID=MS.gene39798.t1.exon4;Parent=MS.gene39798.t1 |
| chr5.4 | CDS | 69265657 | 69266215 | 69265657 | ID=cds.MS.gene39798.t1;Parent=MS.gene39798.t1 |
| Gene Sequence |
| Protein sequence |
