AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40026

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40026.t1 MTR_1g073170 96.484 256 9 0 1 256 1 256 0.0 511
MS.gene40026.t1 MTR_1g045610 64.015 264 86 5 2 264 3 258 1.21e-107 312
MS.gene40026.t1 MTR_1g110460 65.455 110 38 0 16 125 22 131 9.59e-52 171
MS.gene40026.t1 MTR_1g086510 68.571 105 33 0 21 125 22 126 2.51e-51 169
MS.gene40026.t1 MTR_7g035075 65.455 110 38 0 21 130 15 124 7.76e-51 166
MS.gene40026.t1 MTR_6g006030 66.667 105 35 0 21 125 15 119 3.55e-50 164
MS.gene40026.t1 MTR_1g086530 65.714 105 36 0 21 125 34 138 3.73e-50 166
MS.gene40026.t1 MTR_4g063100 66.019 103 35 0 21 123 8 110 2.17e-48 160
MS.gene40026.t1 MTR_4g478180 62.037 108 41 0 16 123 9 116 3.10e-47 160
MS.gene40026.t1 MTR_5g078140 47.283 184 88 4 21 197 13 194 3.54e-47 159
MS.gene40026.t1 MTR_2g096380 59.821 112 45 0 15 126 1 112 6.93e-47 156
MS.gene40026.t1 MTR_3g097450 62.727 110 41 0 14 123 6 115 2.22e-46 157
MS.gene40026.t1 MTR_3g074520 61.111 108 42 0 16 123 8 115 3.77e-46 157
MS.gene40026.t1 MTR_4g102380 66.019 103 35 0 21 123 13 115 7.54e-46 155
MS.gene40026.t1 MTR_7g117730 63.810 105 38 0 22 126 14 118 7.94e-46 154
MS.gene40026.t1 MTR_8g027345 66.667 102 34 0 22 123 14 115 8.38e-46 155
MS.gene40026.t1 MTR_4g073420 40.625 192 98 4 14 205 6 181 2.45e-45 154
MS.gene40026.t1 MTR_4g125520 62.857 105 39 0 22 126 14 118 3.76e-45 154
MS.gene40026.t1 MTR_2g033170 67.619 105 34 0 21 125 25 129 1.44e-44 153
MS.gene40026.t1 MTR_5g007370 56.481 108 47 0 16 123 8 115 1.68e-44 152
MS.gene40026.t1 MTR_4g121460 64.423 104 37 0 21 124 13 116 5.45e-44 152
MS.gene40026.t1 MTR_1g076150 57.522 113 48 0 21 133 13 125 6.40e-44 149
MS.gene40026.t1 MTR_7g115650 58.095 105 44 0 21 125 13 117 8.47e-44 147
MS.gene40026.t1 MTR_3g065440 62.857 105 39 0 21 125 13 117 9.67e-44 150
MS.gene40026.t1 MTR_1g085040 60.177 113 45 0 13 125 5 117 1.10e-43 152
MS.gene40026.t1 MTR_7g011170 64.078 103 37 0 21 123 13 115 1.20e-43 150
MS.gene40026.t1 MTR_3g083540 63.208 106 39 0 21 126 42 147 1.62e-43 150
MS.gene40026.t1 MTR_5g029840 56.780 118 51 0 21 138 13 130 1.78e-43 150
MS.gene40026.t1 MTR_1g062940 38.565 223 120 6 21 237 7 218 2.55e-43 147
MS.gene40026.t1 MTR_2g097910 51.079 139 60 1 21 151 21 159 2.58e-43 149
MS.gene40026.t1 MTR_5g079670 59.804 102 41 0 22 123 13 114 2.68e-43 146
MS.gene40026.t1 MTR_2g011660 60.194 103 41 0 21 123 14 116 4.45e-43 150
MS.gene40026.t1 MTR_8g031360 61.538 104 39 1 21 123 14 117 4.58e-43 148
MS.gene40026.t1 MTR_3g052450 60.185 108 43 0 16 123 36 143 5.23e-43 153
MS.gene40026.t1 MTR_8g095390 60.000 110 44 0 14 123 6 115 7.17e-43 148
MS.gene40026.t1 MTR_1g100653 58.095 105 44 0 21 125 13 117 8.45e-43 147
MS.gene40026.t1 MTR_7g096930 54.400 125 53 2 21 145 13 133 8.81e-43 147
MS.gene40026.t1 MTR_7g076740 58.879 107 43 1 21 126 13 119 8.98e-43 148
MS.gene40026.t1 MTR_8g017440 56.757 111 48 0 13 123 5 115 1.36e-42 148
MS.gene40026.t1 MTR_4g082230 62.037 108 41 0 16 123 8 115 1.47e-42 150
MS.gene40026.t1 MTR_3g077110 48.551 138 69 1 19 156 11 146 1.81e-42 148
MS.gene40026.t1 MTR_3g011610 58.261 115 48 0 11 125 28 142 1.82e-42 152
MS.gene40026.t1 MTR_2g089620 60.194 103 41 0 21 123 13 115 2.02e-42 147
MS.gene40026.t1 MTR_4g123040 64.762 105 37 0 21 125 25 129 3.01e-42 147
MS.gene40026.t1 MTR_1g112760 60.000 105 42 0 19 123 12 116 3.63e-42 144
MS.gene40026.t1 MTR_3g052430 61.165 103 40 0 21 123 42 144 4.26e-42 151
MS.gene40026.t1 MTR_2g034790 62.136 103 39 0 21 123 13 115 5.53e-42 146
MS.gene40026.t1 MTR_4g091490 59.223 103 42 0 21 123 14 116 6.42e-42 147
MS.gene40026.t1 MTR_1g043080 58.252 103 43 0 21 123 13 115 7.59e-42 144
MS.gene40026.t1 MTR_1g043050 50.781 128 61 1 21 148 13 138 8.96e-42 144
MS.gene40026.t1 MTR_0251s0050 48.592 142 72 1 21 161 14 155 1.19e-41 144
MS.gene40026.t1 MTR_2g099740 55.856 111 49 0 13 123 5 115 2.36e-41 146
MS.gene40026.t1 MTR_8g042410 60.952 105 41 0 21 125 38 142 3.00e-41 149
MS.gene40026.t1 MTR_4g485530 59.804 102 41 0 22 123 14 115 3.46e-41 140
MS.gene40026.t1 MTR_8g017540 55.357 112 50 0 13 124 51 162 3.56e-41 146
MS.gene40026.t1 MTR_4g082290 62.136 103 39 0 21 123 13 115 3.65e-41 146
MS.gene40026.t1 MTR_1g085640 35.600 250 134 3 13 262 5 227 4.97e-41 145
MS.gene40026.t1 MTR_7g111290 62.500 104 39 0 13 116 5 108 5.24e-41 145
MS.gene40026.t1 MTR_6g012690 61.165 103 40 0 21 123 13 115 5.84e-41 144
MS.gene40026.t1 MTR_1g100667 61.538 104 40 0 21 124 14 117 6.04e-41 142
MS.gene40026.t1 MTR_3g039990 43.671 158 87 1 21 176 14 171 7.41e-41 143
MS.gene40026.t1 MTR_8g017500 55.856 111 49 0 13 123 5 115 7.84e-41 144
MS.gene40026.t1 MTR_0008s0280 58.095 105 44 0 21 125 13 117 1.26e-40 140
MS.gene40026.t1 MTR_2g064160 53.982 113 52 0 11 123 2 114 1.28e-40 142
MS.gene40026.t1 MTR_6g055910 56.881 109 47 0 15 123 9 117 1.39e-40 141
MS.gene40026.t1 MTR_2g089450 47.651 149 72 3 21 165 13 159 2.07e-40 140
MS.gene40026.t1 MTR_7g110830 56.637 113 49 0 13 125 5 117 2.49e-40 143
MS.gene40026.t1 MTR_1g021230 59.048 105 43 0 21 125 58 162 2.98e-40 144
MS.gene40026.t1 MTR_0008s0390 54.310 116 53 0 21 136 14 129 4.84e-40 140
MS.gene40026.t1 MTR_4g065017 58.559 111 46 0 18 128 15 125 6.79e-40 141
MS.gene40026.t1 MTR_8g020490 58.333 108 44 1 22 128 10 117 6.82e-40 139
MS.gene40026.t1 MTR_0140s0030 45.033 151 80 1 21 168 14 164 1.15e-39 140
MS.gene40026.t1 MTR_0489s0020 45.033 151 80 1 21 168 14 164 1.15e-39 140
MS.gene40026.t1 MTR_7g010210 58.095 105 44 0 21 125 13 117 1.46e-39 139
MS.gene40026.t1 MTR_7g010210 58.095 105 44 0 21 125 13 117 1.59e-39 140
MS.gene40026.t1 MTR_2g089420 61.165 103 40 0 21 123 12 114 1.61e-39 142
MS.gene40026.t1 MTR_3g028740 54.955 111 50 0 15 125 17 127 1.69e-39 140
MS.gene40026.t1 MTR_4g105130 59.048 105 43 0 19 123 11 115 2.54e-39 140
MS.gene40026.t1 MTR_7g087130 51.200 125 55 1 21 139 13 137 4.24e-39 139
MS.gene40026.t1 MTR_8g098860 53.982 113 52 0 13 125 5 117 5.01e-39 138
MS.gene40026.t1 MTR_1g017000 52.294 109 51 1 16 123 8 116 9.66e-39 136
MS.gene40026.t1 MTR_8g017340 54.464 112 50 1 13 123 5 116 1.06e-38 141
MS.gene40026.t1 MTR_4g100720 53.153 111 52 0 22 132 15 125 1.21e-38 133
MS.gene40026.t1 MTR_8g017390 54.464 112 50 1 13 123 5 116 1.28e-38 140
MS.gene40026.t1 MTR_0008s0470 56.311 103 45 0 21 123 14 116 2.69e-38 135
MS.gene40026.t1 MTR_0063s0090 40.645 155 87 2 21 170 13 167 6.86e-38 133
MS.gene40026.t1 MTR_8g017350 53.571 112 51 1 13 123 5 116 8.84e-38 140
MS.gene40026.t1 MTR_5g010020 54.717 106 48 0 13 118 5 110 1.25e-37 135
MS.gene40026.t1 MTR_3g461490 54.545 110 50 0 14 123 6 115 2.03e-37 134
MS.gene40026.t1 MTR_6g009430 56.311 103 45 0 21 123 13 115 4.12e-37 134
MS.gene40026.t1 MTR_7g109320 63.462 104 38 0 21 124 13 116 4.74e-37 134
MS.gene40026.t1 MTR_5g042030 57.282 103 44 0 21 123 8 110 7.48e-37 132
MS.gene40026.t1 MTR_6g012180 57.576 99 42 0 21 119 13 111 1.59e-36 132
MS.gene40026.t1 MTR_4g063100 73.973 73 19 0 51 123 9 81 2.03e-36 129
MS.gene40026.t1 MTR_2g095520 59.596 99 39 1 21 118 13 111 2.32e-36 131
MS.gene40026.t1 MTR_2g088170 61.165 103 40 0 21 123 30 132 2.73e-36 134
MS.gene40026.t1 MTR_1g017140 52.500 120 54 2 21 137 13 132 2.93e-36 132
MS.gene40026.t1 MTR_5g078910 55.856 111 48 1 15 124 1 111 8.86e-36 129
MS.gene40026.t1 MTR_4g057635 55.769 104 45 1 21 123 13 116 1.21e-35 130
MS.gene40026.t1 MTR_2g067420 56.566 99 43 0 21 119 15 113 1.48e-35 129
MS.gene40026.t1 MTR_7g102110 52.212 113 53 1 21 132 13 125 3.46e-35 127
MS.gene40026.t1 MTR_3g103570 55.769 104 45 1 21 123 13 116 3.46e-35 129
MS.gene40026.t1 MTR_5g079120 52.500 120 54 2 15 133 55 172 4.24e-35 128
MS.gene40026.t1 MTR_0197s0010 46.154 130 66 1 25 154 6 131 4.39e-35 125
MS.gene40026.t1 MTR_5g079290 32.203 236 145 3 21 241 18 253 6.34e-35 126
MS.gene40026.t1 MTR_1g083630 55.140 107 48 0 19 125 11 117 1.00e-34 132
MS.gene40026.t1 MTR_6g090405 50.450 111 54 1 14 123 6 116 1.68e-34 125
MS.gene40026.t1 MTR_5g014990 45.255 137 71 2 21 156 13 146 2.60e-34 126
MS.gene40026.t1 MTR_5g079220 32.245 245 145 5 21 261 22 249 2.84e-34 125
MS.gene40026.t1 MTR_2g096380 68.421 76 24 0 51 126 18 93 3.39e-34 123
MS.gene40026.t1 MTR_4g097570 54.639 97 43 1 21 116 13 109 5.65e-33 122
MS.gene40026.t1 MTR_0001s0360 54.808 104 47 0 21 124 8 111 8.87e-33 120
MS.gene40026.t1 MTR_8g060940 54.000 100 46 0 21 120 8 107 9.43e-33 120
MS.gene40026.t1 MTR_5g078800 53.153 111 51 1 15 124 1 111 1.04e-32 120
MS.gene40026.t1 MTR_8g006470 50.962 104 50 1 16 118 6 109 1.30e-32 121
MS.gene40026.t1 MTR_7g017260 34.043 235 140 7 21 250 26 250 1.39e-32 120
MS.gene40026.t1 MTR_4g128670 54.545 99 44 1 21 118 13 111 1.54e-32 122
MS.gene40026.t1 MTR_4g097570 54.082 98 43 2 21 116 13 110 3.79e-32 120
MS.gene40026.t1 MTR_5g078930 52.252 111 52 1 14 123 2 112 4.62e-32 117
MS.gene40026.t1 MTR_4g029540 42.537 134 72 2 21 149 11 144 6.68e-32 119
MS.gene40026.t1 MTR_5g088080 50.000 106 52 1 21 125 13 118 6.78e-32 118
MS.gene40026.t1 MTR_5g088150 50.000 106 52 1 21 125 13 118 6.78e-32 118
MS.gene40026.t1 MTR_5g488210 50.000 106 52 1 21 125 13 118 6.78e-32 118
MS.gene40026.t1 MTR_5g088640 50.000 106 52 1 21 125 13 118 7.30e-32 119
MS.gene40026.t1 MTR_5g488170 50.000 106 52 1 21 125 13 118 1.26e-31 117
MS.gene40026.t1 MTR_0247s0040 52.475 101 48 0 21 121 8 108 1.99e-31 115
MS.gene40026.t1 MTR_5g062790 49.515 103 51 1 21 122 10 112 1.27e-30 116
MS.gene40026.t1 MTR_5g078950 51.485 101 49 0 21 121 8 108 1.42e-30 115
MS.gene40026.t1 MTR_5g078860 50.450 111 54 1 15 124 1 111 3.09e-30 115
MS.gene40026.t1 MTR_0193s0090 50.000 102 51 0 21 122 8 109 6.46e-30 112
MS.gene40026.t1 MTR_6g055910 64.384 73 26 0 51 123 16 88 7.25e-30 113
MS.gene40026.t1 MTR_3g101290 49.038 104 50 2 22 124 37 138 1.16e-29 111
MS.gene40026.t1 MTR_5g088610 48.113 106 54 1 21 125 10 115 2.99e-29 113
MS.gene40026.t1 MTR_5g016510 49.515 103 49 2 22 123 5 105 2.75e-28 110
MS.gene40026.t1 MTR_7g111290 71.212 66 19 0 51 116 1 66 7.39e-28 109
MS.gene40026.t1 MTR_4g094982 49.020 102 51 1 22 123 5 105 1.55e-27 107
MS.gene40026.t1 MTR_4g019370 48.544 103 50 2 22 123 38 138 2.80e-27 108
MS.gene40026.t1 MTR_5g007300 55.263 76 34 0 21 96 65 140 5.82e-27 102
MS.gene40026.t1 MTR_6g015455 40.268 149 78 4 22 162 5 150 7.26e-27 109
MS.gene40026.t1 MTR_5g070020 44.355 124 61 3 22 139 122 243 7.48e-27 107
MS.gene40026.t1 MTR_3g045430 46.602 103 55 0 21 123 14 116 2.20e-26 104
MS.gene40026.t1 MTR_5g049190 34.595 185 91 5 22 178 19 201 6.07e-26 102
MS.gene40026.t1 MTR_4g128190 31.780 236 129 7 21 241 12 230 1.49e-25 101
MS.gene40026.t1 MTR_5g082910 49.000 100 48 2 22 120 19 116 6.12e-25 100
MS.gene40026.t1 MTR_3g463400 45.536 112 53 3 22 127 133 242 9.87e-25 102
MS.gene40026.t1 MTR_7g061330 48.544 103 50 2 22 123 113 213 1.10e-24 103
MS.gene40026.t1 MTR_7g061330 37.037 108 66 2 19 125 58 164 4.07e-13 69.3
MS.gene40026.t1 MTR_7g461410 48.544 103 50 2 22 123 113 213 1.10e-24 103
MS.gene40026.t1 MTR_7g461410 37.037 108 66 2 19 125 58 164 4.07e-13 69.3
MS.gene40026.t1 MTR_7g061330 48.544 103 50 2 22 123 77 177 1.49e-24 102
MS.gene40026.t1 MTR_7g061330 37.037 108 66 2 19 125 22 128 5.31e-13 68.9
MS.gene40026.t1 MTR_7g451170 37.870 169 87 7 22 182 191 349 2.91e-24 100
MS.gene40026.t1 MTR_4g105660 46.296 108 51 3 22 124 180 285 3.71e-24 100
MS.gene40026.t1 MTR_3g110028 44.660 103 54 2 22 123 85 185 4.44e-24 101
MS.gene40026.t1 MTR_3g110028 34.234 111 66 3 19 128 30 134 3.73e-11 63.5
MS.gene40026.t1 MTR_3g077650 46.939 98 49 2 20 116 179 274 5.34e-24 100
MS.gene40026.t1 MTR_1g026870 45.631 103 53 2 22 123 85 185 6.50e-24 101
MS.gene40026.t1 MTR_1g026870 33.981 103 66 2 19 120 30 131 2.99e-11 63.9
MS.gene40026.t1 MTR_1g085880 36.264 182 96 5 19 188 10 183 1.26e-23 95.1
MS.gene40026.t1 MTR_7g037260 43.860 114 60 2 22 132 145 257 1.87e-23 97.8
MS.gene40026.t1 MTR_1g085770 36.264 182 96 5 19 188 10 183 7.54e-23 95.5
MS.gene40026.t1 MTR_1g057980 42.718 103 58 1 16 118 74 175 1.16e-22 94.7
MS.gene40026.t1 MTR_5g041570 41.818 110 61 2 22 130 134 241 1.95e-22 95.9
MS.gene40026.t1 MTR_7g450950 41.237 97 56 1 22 118 157 252 1.98e-22 94.7
MS.gene40026.t1 MTR_6g074860 44.898 98 51 2 22 118 4 99 2.34e-22 92.8
MS.gene40026.t1 MTR_5g010650 50.000 96 45 2 22 116 110 203 3.80e-22 95.5
MS.gene40026.t1 MTR_4g082040 38.095 126 74 3 22 145 105 228 1.14e-21 93.6
MS.gene40026.t1 MTR_4g088015 43.103 116 58 4 22 132 221 333 1.51e-21 93.6
MS.gene40026.t1 MTR_6g027340 39.796 98 56 2 22 118 16 111 9.14e-21 87.8
MS.gene40026.t1 MTR_7g061550 44.554 101 53 2 25 123 10 109 1.32e-20 90.1
MS.gene40026.t1 MTR_6g027360 37.838 111 65 3 9 118 66 173 2.42e-20 88.6
MS.gene40026.t1 MTR_7g037130 40.351 114 64 2 22 132 145 257 1.52e-19 87.0
MS.gene40026.t1 MTR_7g035350 43.158 95 51 2 25 118 228 320 3.23e-19 87.0
MS.gene40026.t1 MTR_4g063100 73.913 46 12 0 78 123 1 46 3.38e-19 83.2
MS.gene40026.t1 MTR_3g089045 43.689 103 55 2 22 123 16 116 4.52e-19 84.7
MS.gene40026.t1 MTR_6g027370 34.328 134 78 3 8 140 92 216 1.42e-18 84.3
MS.gene40026.t1 MTR_7g086960 44.898 98 51 2 22 118 89 184 1.72e-18 84.0
MS.gene40026.t1 MTR_2g096380 67.347 49 16 0 78 126 1 49 3.80e-18 79.7
MS.gene40026.t1 MTR_8g468380 39.450 109 65 1 25 133 25 132 5.82e-17 80.1
MS.gene40026.t1 MTR_0023s0210 47.368 76 40 0 21 96 8 83 6.81e-17 73.9
MS.gene40026.t1 MTR_5g038910 37.624 101 62 1 25 125 29 128 1.66e-16 79.0
MS.gene40026.t1 MTR_5g038910 37.624 101 62 1 25 125 29 128 1.90e-16 78.6
MS.gene40026.t1 MTR_6g055910 58.696 46 19 0 78 123 2 47 1.55e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40026.t1 AT3G24310 56.031 257 102 5 17 264 15 269 2.38e-83 251
MS.gene40026.t1 AT4G13480 50.185 271 104 6 15 264 1 261 3.12e-81 245
MS.gene40026.t1 AT3G30210 50.685 219 89 4 21 239 28 227 2.59e-62 197
MS.gene40026.t1 AT1G48000 71.429 105 30 0 21 125 33 137 9.52e-52 169
MS.gene40026.t1 AT3G27810 66.667 105 35 0 21 125 21 125 2.62e-50 165
MS.gene40026.t1 AT5G59780 63.964 111 40 0 15 125 3 113 3.06e-50 165
MS.gene40026.t1 AT3G46130 64.286 112 40 0 14 125 3 114 3.64e-50 166
MS.gene40026.t1 AT5G40350 67.647 102 33 0 21 122 18 119 1.72e-49 162
MS.gene40026.t1 AT2G47190 61.261 111 43 0 16 126 16 126 1.72e-48 162
MS.gene40026.t1 AT3G01530 60.526 114 45 0 16 129 21 134 1.76e-48 159
MS.gene40026.t1 AT1G68320 64.762 105 37 0 21 125 20 124 3.72e-48 161
MS.gene40026.t1 AT1G25340 62.857 105 39 0 21 125 19 123 9.06e-47 157
MS.gene40026.t1 AT2G16720 52.482 141 65 1 14 154 6 144 1.95e-46 156
MS.gene40026.t1 AT3G53200 62.617 107 40 0 17 123 6 112 6.47e-46 154
MS.gene40026.t1 AT4G09460 40.404 198 102 3 22 219 14 195 1.96e-45 152
MS.gene40026.t1 AT4G34990 44.624 186 77 3 14 176 6 188 2.07e-45 154
MS.gene40026.t1 AT1G22640 64.706 102 36 0 22 123 14 115 5.03e-45 152
MS.gene40026.t1 AT1G06180 58.407 113 47 0 21 133 13 125 5.42e-45 152
MS.gene40026.t1 AT5G49620 66.964 112 37 0 14 125 20 131 1.37e-44 152
MS.gene40026.t1 AT5G26660 61.062 113 44 0 13 125 5 117 1.45e-44 154
MS.gene40026.t1 AT1G35515 60.177 113 45 0 14 126 6 118 1.70e-44 149
MS.gene40026.t1 AT5G14750 58.491 106 44 0 18 123 14 119 1.99e-44 149
MS.gene40026.t1 AT4G38620 40.722 194 105 3 14 207 6 189 2.04e-44 151
MS.gene40026.t1 AT5G16770 59.259 108 44 0 16 123 8 115 2.15e-44 152
MS.gene40026.t1 AT5G16770 59.259 108 44 0 16 123 8 115 2.15e-44 152
MS.gene40026.t1 AT3G06490 67.619 105 34 0 21 125 20 124 2.85e-44 152
MS.gene40026.t1 AT5G10280 58.182 110 46 0 14 123 6 115 2.96e-44 152
MS.gene40026.t1 AT5G16770 59.259 108 44 0 16 123 8 115 4.13e-44 152
MS.gene40026.t1 AT5G16770 59.259 108 44 0 16 123 8 115 4.13e-44 152
MS.gene40026.t1 AT4G28110 59.223 103 42 0 21 123 13 115 5.88e-44 150
MS.gene40026.t1 AT5G65230 60.185 108 43 0 16 123 8 115 6.31e-44 151
MS.gene40026.t1 AT5G54230 62.136 103 39 0 21 123 13 115 6.55e-44 151
MS.gene40026.t1 AT3G13540 63.107 103 38 0 21 123 24 126 9.60e-44 149
MS.gene40026.t1 AT4G21440 58.333 108 45 0 16 123 8 115 1.04e-43 151
MS.gene40026.t1 AT2G32460 57.759 116 49 0 10 125 8 123 1.05e-43 154
MS.gene40026.t1 AT5G07690 63.725 102 37 0 21 122 13 114 1.13e-43 151
MS.gene40026.t1 AT5G40330 56.481 108 47 0 16 123 8 115 1.50e-43 147
MS.gene40026.t1 AT4G12350 63.107 103 38 0 21 123 13 115 1.72e-43 149
MS.gene40026.t1 AT3G02940 59.259 108 44 0 16 123 8 115 2.02e-43 150
MS.gene40026.t1 AT4G05100 60.194 103 41 0 21 123 14 116 2.12e-43 150
MS.gene40026.t1 AT3G61250 60.194 103 41 0 21 123 13 115 2.89e-43 149
MS.gene40026.t1 AT5G07700 62.136 103 39 0 21 123 13 115 3.15e-43 150
MS.gene40026.t1 AT5G07700 62.136 103 39 0 21 123 13 115 3.15e-43 150
MS.gene40026.t1 AT3G02940 59.259 108 44 0 16 123 8 115 3.62e-43 149
MS.gene40026.t1 AT3G02940 59.259 108 44 0 16 123 8 115 3.62e-43 149
MS.gene40026.t1 AT5G61420 62.136 103 39 0 21 123 13 115 4.00e-43 150
MS.gene40026.t1 AT3G01140 64.078 103 37 0 21 123 13 115 4.15e-43 150
MS.gene40026.t1 AT2G31180 61.165 103 40 0 21 123 13 115 5.06e-43 147
MS.gene40026.t1 AT1G18570 63.107 103 38 0 21 123 14 116 5.17e-43 150
MS.gene40026.t1 AT5G15310 63.107 103 38 0 21 123 13 115 5.43e-43 147
MS.gene40026.t1 AT1G34670 59.259 108 44 0 16 123 8 115 5.61e-43 150
MS.gene40026.t1 AT3G11440 62.136 103 39 0 21 123 42 144 6.26e-43 152
MS.gene40026.t1 AT4G22680 62.136 103 39 0 21 123 13 115 7.95e-43 147
MS.gene40026.t1 AT3G01140 64.078 103 37 0 21 123 56 158 9.35e-43 150
MS.gene40026.t1 AT3G47600 56.303 119 52 0 21 139 13 131 9.54e-43 149
MS.gene40026.t1 AT1G66230 48.252 143 73 1 21 162 13 155 9.69e-43 147
MS.gene40026.t1 AT5G15310 63.107 103 38 0 21 123 13 115 1.14e-42 148
MS.gene40026.t1 AT3G27920 54.622 119 54 0 16 134 10 128 1.20e-42 145
MS.gene40026.t1 AT5G15310 63.107 103 38 0 21 123 13 115 1.38e-42 147
MS.gene40026.t1 AT1G57560 53.333 135 54 1 13 138 5 139 1.53e-42 147
MS.gene40026.t1 AT2G32460 60.952 105 41 0 21 125 7 111 1.57e-42 151
MS.gene40026.t1 AT1G57560 59.459 111 45 0 13 123 5 115 2.17e-42 146
MS.gene40026.t1 AT5G06100 62.136 103 39 0 21 123 33 135 2.44e-42 150
MS.gene40026.t1 AT3G11440 62.136 103 39 0 21 123 42 144 3.09e-42 152
MS.gene40026.t1 AT3G11440 62.136 103 39 0 21 123 42 144 3.09e-42 152
MS.gene40026.t1 AT3G11440 62.136 103 39 0 21 123 42 144 3.09e-42 152
MS.gene40026.t1 AT5G60890 58.182 110 46 0 16 125 8 117 3.22e-42 146
MS.gene40026.t1 AT5G16600 44.970 169 73 2 21 169 13 181 3.41e-42 147
MS.gene40026.t1 AT1G25340 60.000 105 37 1 21 125 19 118 3.99e-42 145
MS.gene40026.t1 AT5G62470 48.684 152 67 2 21 161 13 164 4.58e-42 147
MS.gene40026.t1 AT1G09540 59.292 113 46 0 13 125 5 117 5.00e-42 147
MS.gene40026.t1 AT5G06100 62.136 103 39 0 21 123 33 135 8.81e-42 150
MS.gene40026.t1 AT5G06100 62.136 103 39 0 21 123 33 135 8.81e-42 150
MS.gene40026.t1 AT5G06100 62.136 103 39 0 21 123 33 135 8.81e-42 150
MS.gene40026.t1 AT5G06100 62.136 103 39 0 21 123 33 135 8.81e-42 150
MS.gene40026.t1 AT1G25340 60.000 105 37 1 21 125 19 118 8.99e-42 145
MS.gene40026.t1 AT3G23250 52.137 117 56 0 21 137 13 129 1.66e-41 144
MS.gene40026.t1 AT3G62610 60.194 103 41 0 21 123 13 115 2.53e-41 145
MS.gene40026.t1 AT4G01680 58.407 113 47 0 13 125 5 117 2.82e-41 142
MS.gene40026.t1 AT1G74080 62.745 102 38 0 21 122 13 114 2.94e-41 145
MS.gene40026.t1 AT5G62320 59.091 110 38 1 21 123 14 123 4.57e-41 142
MS.gene40026.t1 AT2G26960 62.136 103 39 0 20 122 20 122 4.80e-41 146
MS.gene40026.t1 AT5G49620 59.524 126 37 1 14 125 20 145 6.26e-41 143
MS.gene40026.t1 AT3G13890 54.955 111 50 0 13 123 5 115 7.09e-41 144
MS.gene40026.t1 AT4G17785 61.165 103 40 0 21 123 14 116 8.21e-41 144
MS.gene40026.t1 AT4G01680 58.407 113 47 0 13 125 5 117 8.96e-41 143
MS.gene40026.t1 AT5G49330 61.165 103 40 0 21 123 13 115 9.00e-41 144
MS.gene40026.t1 AT4G17785 61.165 103 40 0 21 123 14 116 1.01e-40 144
MS.gene40026.t1 AT1G08810 54.098 122 55 1 21 142 13 133 1.33e-40 141
MS.gene40026.t1 AT2G47460 58.491 106 44 0 21 126 13 118 1.96e-40 143
MS.gene40026.t1 AT5G52600 58.252 103 43 0 21 123 13 115 5.23e-40 137
MS.gene40026.t1 AT1G79180 53.509 114 53 0 21 134 15 128 9.36e-40 140
MS.gene40026.t1 AT1G74650 60.194 103 41 0 21 123 13 115 1.03e-39 140
MS.gene40026.t1 AT5G62470 48.026 152 67 3 21 161 13 163 1.32e-39 140
MS.gene40026.t1 AT3G12720 55.340 103 46 0 21 123 23 125 1.49e-39 139
MS.gene40026.t1 AT1G56160 52.727 110 52 0 14 123 8 117 1.60e-39 139
MS.gene40026.t1 AT5G12870 53.390 118 55 0 13 130 11 128 1.70e-39 139
MS.gene40026.t1 AT1G63910 53.043 115 54 0 13 127 5 119 2.35e-39 140
MS.gene40026.t1 AT3G08500 57.944 107 45 0 19 125 29 135 3.17e-39 139
MS.gene40026.t1 AT5G55020 59.804 102 41 0 21 122 27 128 3.35e-39 143
MS.gene40026.t1 AT3G48920 58.491 106 44 0 17 122 15 120 6.03e-39 137
MS.gene40026.t1 AT1G74430 53.448 116 52 1 8 123 2 115 1.35e-38 136
MS.gene40026.t1 AT4G25560 57.547 106 45 0 18 123 8 113 1.51e-38 136
MS.gene40026.t1 AT1G16490 55.340 103 46 0 21 123 15 117 2.13e-38 135
MS.gene40026.t1 AT3G28910 58.252 103 43 0 21 123 13 115 2.44e-38 137
MS.gene40026.t1 AT4G26930 48.227 141 66 2 21 159 20 155 2.50e-38 138
MS.gene40026.t1 AT5G35550 56.863 102 44 0 22 123 16 117 2.95e-38 135
MS.gene40026.t1 AT3G13890 50.833 120 50 1 13 123 5 124 7.08e-38 137
MS.gene40026.t1 AT5G14340 58.491 106 44 0 21 126 25 130 9.36e-38 134
MS.gene40026.t1 AT4G01680 52.800 125 47 1 13 125 5 129 1.19e-37 135
MS.gene40026.t1 AT3G12820 50.862 116 57 0 8 123 2 117 1.44e-37 132
MS.gene40026.t1 AT3G28470 58.163 98 41 0 21 118 13 110 2.51e-37 134
MS.gene40026.t1 AT5G56110 56.481 108 47 0 16 123 8 115 2.60e-37 134
MS.gene40026.t1 AT5G52260 58.095 105 44 0 19 123 11 115 4.57e-37 132
MS.gene40026.t1 AT4G37780 44.218 147 74 2 21 166 13 152 6.85e-37 132
MS.gene40026.t1 AT3G46130 74.324 74 19 0 52 125 9 82 1.35e-35 127
MS.gene40026.t1 AT5G59780 64.835 91 28 1 35 125 6 92 1.40e-35 127
MS.gene40026.t1 AT3G46130 65.169 89 27 1 37 125 8 92 1.92e-35 127
MS.gene40026.t1 AT5G23000 52.252 111 52 1 14 123 6 116 4.29e-35 128
MS.gene40026.t1 AT5G65790 45.324 139 63 2 21 158 13 139 9.73e-35 128
MS.gene40026.t1 AT1G66370 46.043 139 55 2 21 139 9 147 1.15e-34 125
MS.gene40026.t1 AT5G57620 43.590 156 74 3 21 162 13 168 2.91e-34 126
MS.gene40026.t1 AT3G27810 69.863 73 22 0 53 125 4 76 3.40e-34 122
MS.gene40026.t1 AT3G49690 54.206 107 48 1 21 126 13 119 3.73e-34 125
MS.gene40026.t1 AT3G53200 73.239 71 19 0 53 123 9 79 6.63e-34 122
MS.gene40026.t1 AT2G36890 54.808 104 46 1 21 123 13 116 8.92e-34 124
MS.gene40026.t1 AT1G18710 49.138 116 57 1 8 123 2 115 1.59e-33 123
MS.gene40026.t1 AT2G36890 54.808 104 46 1 21 123 54 157 1.86e-33 124
MS.gene40026.t1 AT1G79180 41.497 147 53 1 21 134 15 161 2.82e-33 124
MS.gene40026.t1 AT5G40350 70.000 70 21 0 53 122 5 74 7.91e-33 118
MS.gene40026.t1 AT1G66380 55.340 103 46 0 21 123 9 111 1.69e-31 114
MS.gene40026.t1 AT1G56650 55.340 103 46 0 21 123 9 111 1.89e-31 117
MS.gene40026.t1 AT3G60460 50.485 103 50 1 21 122 12 114 4.96e-31 117
MS.gene40026.t1 AT5G26660 69.863 73 22 0 53 125 14 86 7.23e-31 117
MS.gene40026.t1 AT1G66390 55.340 103 46 0 21 123 9 111 8.23e-31 115
MS.gene40026.t1 AT2G26950 51.546 97 47 0 20 116 16 112 1.54e-30 117
MS.gene40026.t1 AT3G47600 60.714 84 33 0 53 136 39 122 5.37e-29 112
MS.gene40026.t1 AT4G37260 42.748 131 70 3 22 149 13 141 6.66e-28 109
MS.gene40026.t1 AT3G27785 54.167 96 41 2 22 116 189 282 7.85e-28 110
MS.gene40026.t1 AT2G23290 48.696 115 55 3 10 123 2 113 1.41e-27 108
MS.gene40026.t1 AT5G14750 63.235 68 25 0 56 123 18 85 2.87e-27 103
MS.gene40026.t1 AT3G12820 64.706 68 24 0 56 123 2 69 4.79e-27 103
MS.gene40026.t1 AT2G39880 49.038 104 50 2 22 124 50 151 8.03e-27 107
MS.gene40026.t1 AT5G58850 47.826 115 52 3 22 130 105 217 2.48e-26 106
MS.gene40026.t1 AT3G09230 46.552 116 55 3 22 136 55 164 2.51e-26 106
MS.gene40026.t1 AT5G35550 57.895 76 32 0 48 123 45 120 4.36e-26 103
MS.gene40026.t1 AT5G02320 48.544 103 50 2 22 123 127 227 6.94e-26 106
MS.gene40026.t1 AT5G02320 37.864 103 62 2 19 120 72 173 4.28e-13 69.3
MS.gene40026.t1 AT5G02320 48.544 103 50 2 22 123 127 227 6.94e-26 106
MS.gene40026.t1 AT5G02320 37.864 103 62 2 19 120 72 173 4.28e-13 69.3
MS.gene40026.t1 AT5G02320 48.544 103 50 2 22 123 67 167 9.04e-26 105
MS.gene40026.t1 AT5G02320 37.864 103 62 2 19 120 12 113 5.68e-13 68.6
MS.gene40026.t1 AT5G11510 35.526 152 89 3 22 172 81 224 1.83e-25 105
MS.gene40026.t1 AT5G11510 34.951 103 65 2 19 120 26 127 5.32e-12 65.9
MS.gene40026.t1 AT5G11510 35.526 152 89 3 22 172 81 224 2.06e-25 105
MS.gene40026.t1 AT5G11510 34.951 103 65 2 19 120 26 127 5.52e-12 65.9
MS.gene40026.t1 AT5G11510 35.526 152 89 3 22 172 81 224 2.19e-25 105
MS.gene40026.t1 AT5G11510 34.951 103 65 2 19 120 26 127 6.00e-12 65.9
MS.gene40026.t1 AT5G11510 35.526 152 89 3 22 172 81 224 2.19e-25 105
MS.gene40026.t1 AT5G11510 34.951 103 65 2 19 120 26 127 6.00e-12 65.9
MS.gene40026.t1 AT5G11510 35.526 152 89 3 22 172 81 224 2.19e-25 105
MS.gene40026.t1 AT5G11510 34.951 103 65 2 19 120 26 127 6.00e-12 65.9
MS.gene40026.t1 AT3G09370 46.667 105 53 2 22 125 135 237 2.87e-25 104
MS.gene40026.t1 AT3G09370 36.893 103 63 2 19 120 80 181 1.13e-11 64.7
MS.gene40026.t1 AT3G09370 46.667 105 53 2 22 125 130 232 3.21e-25 104
MS.gene40026.t1 AT3G09370 36.893 103 63 2 19 120 75 176 1.23e-11 64.7
MS.gene40026.t1 AT3G09370 46.667 105 53 2 22 125 143 245 3.68e-25 104
MS.gene40026.t1 AT3G09370 36.893 103 63 2 19 120 88 189 1.02e-11 65.1
MS.gene40026.t1 AT4G18770 42.735 117 60 3 12 123 207 321 5.87e-25 102
MS.gene40026.t1 AT3G55730 45.631 103 53 2 22 123 56 156 8.98e-25 102
MS.gene40026.t1 AT5G11050 44.828 116 59 3 22 136 105 216 1.15e-24 102
MS.gene40026.t1 AT3G50060 44.660 103 54 2 22 123 6 106 5.36e-24 98.6
MS.gene40026.t1 AT5G67300 45.631 103 53 2 22 123 6 106 1.84e-23 97.1
MS.gene40026.t1 AT4G32730 44.660 103 54 2 22 123 87 187 2.55e-23 99.4
MS.gene40026.t1 AT4G32730 31.356 118 79 2 4 120 17 133 2.56e-12 67.0
MS.gene40026.t1 AT4G32730 44.660 103 54 2 22 123 87 187 2.76e-23 99.4
MS.gene40026.t1 AT4G32730 31.356 118 79 2 4 120 17 133 3.19e-12 66.6
MS.gene40026.t1 AT4G32730 44.660 103 54 2 22 123 87 187 2.76e-23 99.4
MS.gene40026.t1 AT4G32730 31.356 118 79 2 4 120 17 133 3.19e-12 66.6
MS.gene40026.t1 AT4G32730 44.660 103 54 2 22 123 87 187 2.76e-23 99.4
MS.gene40026.t1 AT4G32730 31.356 118 79 2 4 120 17 133 3.19e-12 66.6
MS.gene40026.t1 AT4G32730 44.660 103 54 2 22 123 87 187 2.76e-23 99.4
MS.gene40026.t1 AT4G32730 31.356 118 79 2 4 120 17 133 3.19e-12 66.6
MS.gene40026.t1 AT1G69560 40.870 115 65 2 22 135 107 219 4.81e-23 96.3
MS.gene40026.t1 AT1G69560 40.870 115 65 2 22 135 123 235 5.41e-23 96.7
MS.gene40026.t1 AT5G40360 45.263 95 51 1 22 116 158 251 7.49e-23 96.3
MS.gene40026.t1 AT1G17950 47.917 96 47 2 22 116 5 98 1.30e-22 93.6
MS.gene40026.t1 AT1G26780 40.000 115 66 2 22 135 98 210 1.92e-22 94.0
MS.gene40026.t1 AT1G26780 40.000 115 66 2 22 135 98 210 3.65e-22 94.4
MS.gene40026.t1 AT1G73410 43.519 108 58 2 22 128 6 111 1.77e-21 90.5
MS.gene40026.t1 AT1G73410 43.519 108 58 2 22 128 6 111 2.17e-21 89.4
MS.gene40026.t1 AT1G22640 63.793 58 21 0 66 123 1 58 2.25e-21 89.4
MS.gene40026.t1 AT5G17800 43.269 104 58 1 22 125 93 195 2.61e-21 91.7
MS.gene40026.t1 AT3G23250 52.778 72 34 0 66 137 1 72 8.50e-21 88.6
MS.gene40026.t1 AT3G29020 40.000 110 63 2 22 130 65 172 8.89e-21 88.6
MS.gene40026.t1 AT1G66380 54.545 77 35 0 47 123 2 78 9.99e-21 84.7
MS.gene40026.t1 AT4G33450 41.176 119 66 3 22 138 19 135 1.78e-20 88.2
MS.gene40026.t1 AT3G29020 40.000 110 63 2 22 130 67 174 2.95e-20 88.6
MS.gene40026.t1 AT5G59780 75.000 48 12 0 78 125 1 48 2.95e-20 85.5
MS.gene40026.t1 AT5G14750 58.621 58 24 0 66 123 1 58 4.45e-20 84.3
MS.gene40026.t1 AT5G14750 58.621 58 24 0 66 123 1 58 4.45e-20 84.3
MS.gene40026.t1 AT3G46130 75.000 48 12 0 78 125 1 48 7.45e-20 85.1
MS.gene40026.t1 AT2G25230 43.158 95 51 2 25 118 29 121 4.61e-19 84.0
MS.gene40026.t1 AT1G71030 47.500 80 41 1 44 123 5 83 1.02e-18 82.0
MS.gene40026.t1 AT1G71030 53.846 65 30 0 59 123 5 69 1.12e-18 81.6
MS.gene40026.t1 AT2G37630 41.584 101 56 2 25 123 7 106 1.19e-18 84.7
MS.gene40026.t1 AT4G00540 45.283 106 52 3 22 123 103 206 3.35e-18 83.6
MS.gene40026.t1 AT4G00540 45.283 106 52 3 22 123 101 204 6.07e-18 83.2
MS.gene40026.t1 AT1G66380 48.750 80 41 0 21 100 9 88 9.70e-18 77.0
MS.gene40026.t1 AT1G18960 39.216 102 59 2 22 123 10 108 1.95e-17 80.5
MS.gene40026.t1 AT1G14350 35.897 117 72 2 25 141 28 141 2.85e-16 78.2
MS.gene40026.t1 AT1G14350 35.897 117 72 2 25 141 28 141 2.85e-16 78.2
MS.gene40026.t1 AT2G02820 34.259 108 70 1 25 132 33 139 1.48e-15 75.5
MS.gene40026.t1 AT2G02820 37.143 105 59 2 25 126 33 133 1.84e-15 76.3
MS.gene40026.t1 AT2G02820 37.143 105 59 2 25 126 33 133 1.99e-15 75.9
MS.gene40026.t1 AT5G39700 38.776 98 59 1 21 118 55 151 7.43e-15 71.2
MS.gene40026.t1 AT5G40430 39.048 105 59 4 25 128 57 157 1.28e-14 72.0
MS.gene40026.t1 AT4G25560 63.043 46 17 0 78 123 2 47 4.84e-14 69.7
MS.gene40026.t1 AT3G18100 33.333 123 72 3 2 117 360 479 2.56e-12 67.0
MS.gene40026.t1 AT3G18100 32.540 126 75 3 2 120 308 430 3.17e-12 66.6
MS.gene40026.t1 AT3G18100 32.540 126 75 3 2 120 473 595 3.51e-12 66.6
MS.gene40026.t1 AT3G18100 33.333 123 72 3 2 117 521 640 3.56e-12 66.6
MS.gene40026.t1 AT5G61420 74.286 35 9 0 89 123 2 36 2.98e-11 62.8

Find 55 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTTAAGGTCTGGTCTT+AGG 0.259563 1.4:+59748459 None:intergenic
ATTTCTTTCAATATGTATTC+AGG 0.268017 1.4:-59748922 None:intergenic
AACTCTGTCTCTAGGCTTGC+AGG 0.297134 1.4:-59748775 MS.gene40026:intron
GTGTTATCTGACCCTTCTTA+AGG 0.320325 1.4:+59748447 None:intergenic
ATCTCATTGTCAGTTCTTCC+CGG 0.346112 1.4:+59748216 None:intergenic
AACAATTGCAAGAAGCTTGC+CGG 0.352730 1.4:-59748235 MS.gene40026:CDS
TTTACAGGGCTGAGAAGAAA+TGG 0.355023 1.4:-59748512 MS.gene40026:intron
GTGTAATGGAAGAAGATAGA+TGG 0.371974 1.4:-59748873 MS.gene40026:CDS
ATCTGACCCTTCTTAAGGTC+TGG 0.379207 1.4:+59748452 None:intergenic
AGAATTTGTGGGATGAACTT+TGG 0.380605 1.4:-59747846 MS.gene40026:CDS
TGCTGATACACAAGAACAAC+AGG 0.383909 1.4:-59747935 MS.gene40026:CDS
TGGAACTTGGATGATGCTCT+TGG 0.418349 1.4:-59747826 MS.gene40026:CDS
ACAATGAGATAAAGAACTAT+TGG 0.425896 1.4:-59748203 MS.gene40026:CDS
CCCCTCTGATAGTGCTGAAA+AGG 0.431504 1.4:-59748151 MS.gene40026:CDS
TACATGCTAGGTGGGGAAAC+AGG 0.437338 1.4:-59748397 MS.gene40026:intron
TTCTCAAGAGACACAAGAAA+TGG 0.446329 1.4:-59747968 MS.gene40026:CDS
ACTACATTGTGCACATTGGC+TGG 0.456615 1.4:+59747772 None:intergenic
CTTCAAATGAAGAGAATTTG+TGG 0.464547 1.4:-59747858 MS.gene40026:CDS
TTCTTGTGTATCAGCATACA+TGG 0.469010 1.4:+59747942 None:intergenic
CAATATGTATTCAGGAATGA+TGG 0.474198 1.4:-59748914 None:intergenic
TTACAGGGCTGAGAAGAAAT+GGG 0.476247 1.4:-59748511 MS.gene40026:intron
GTGGGATGAACTTTGGAACT+TGG 0.486294 1.4:-59747839 MS.gene40026:CDS
TGTGTCTCTTGAGAAGTAGA+AGG 0.496024 1.4:+59747976 None:intergenic
CCTAGAGCTACATGCTAGGT+GGG 0.498599 1.4:-59748405 MS.gene40026:CDS
AGCTGCATGGTGAAGGCAGA+TGG 0.509674 1.4:-59748798 MS.gene40026:CDS
ATGAGATAAAGAACTATTGG+AGG 0.513857 1.4:-59748200 MS.gene40026:CDS
ACAATTGCAAGAAGCTTGCC+GGG 0.514007 1.4:-59748234 MS.gene40026:CDS
TTCAAATGAAGAGAATTTGT+GGG 0.514100 1.4:-59747857 MS.gene40026:CDS
CCCACCTAGCATGTAGCTCT+AGG 0.519377 1.4:+59748405 None:intergenic
CCTAAGACCAGACCTTAAGA+AGG 0.523078 1.4:-59748459 MS.gene40026:CDS
CAATACAACATGGATATGAA+AGG 0.529980 1.4:-59748045 MS.gene40026:CDS
TCTATGCTCAATGATAATAG+TGG 0.536144 1.4:-59747901 MS.gene40026:CDS
AATACAACATGGATATGAAA+GGG 0.545056 1.4:-59748044 MS.gene40026:CDS
GCAGATGGAACTCTGTCTCT+AGG 0.556467 1.4:-59748783 MS.gene40026:CDS
ATAGATGGAGGAAAGGACCT+TGG 0.564310 1.4:-59748858 MS.gene40026:CDS
GAAGAAGATAGATGGAGGAA+AGG 0.569212 1.4:-59748865 MS.gene40026:CDS
GGAAAAGTTGTAGACTGAGA+TGG 0.570618 1.4:-59748490 MS.gene40026:CDS
GGAATGATGGAAGGAAACAC+TGG 0.575742 1.4:-59748901 MS.gene40026:CDS
AAACACTGGATGGAGTGTAA+TGG 0.585481 1.4:-59748887 MS.gene40026:CDS
GAAAAGTTGTAGACTGAGAT+GGG 0.586925 1.4:-59748489 MS.gene40026:CDS
GAAAGGACCTTGGACTTCTG+AGG 0.594052 1.4:-59748848 MS.gene40026:CDS
GATCATAGACTTGTTGCTTG+AGG 0.595685 1.4:-59748022 MS.gene40026:CDS
TAATGGAAGAAGATAGATGG+AGG 0.601607 1.4:-59748870 MS.gene40026:CDS
ATGTATTCAGGAATGATGGA+AGG 0.607186 1.4:-59748910 MS.gene40026:CDS
TTGTCTTCCTCAGAAGTCCA+AGG 0.607855 1.4:+59748841 None:intergenic
TATGTCAAGCTGCATGGTGA+AGG 0.610102 1.4:-59748805 MS.gene40026:CDS
TGATGGAAGGAAACACTGGA+TGG 0.616620 1.4:-59748897 MS.gene40026:CDS
TCCTAGAGCTACATGCTAGG+TGG 0.619467 1.4:-59748406 MS.gene40026:CDS
AGCAACTACATTGTGCACAT+TGG 0.622143 1.4:+59747768 None:intergenic
TAATCCTAGAGCTACATGCT+AGG 0.625705 1.4:-59748409 MS.gene40026:CDS
CTAAGACCAGACCTTAAGAA+GGG 0.632926 1.4:-59748458 MS.gene40026:CDS
CTAGAGCTACATGCTAGGTG+GGG 0.652296 1.4:-59748404 MS.gene40026:CDS
ATTGAGTATGTCAAGCTGCA+TGG 0.654811 1.4:-59748811 MS.gene40026:CDS
ACAACAACTGCAATACAACA+TGG 0.663800 1.4:-59748055 MS.gene40026:CDS
GCTGATACACAAGAACAACA+GGG 0.786231 1.4:-59747934 MS.gene40026:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATATATGATCAATA+AGG + chr1.4:59748136-59748155 None:intergenic 10.0%
!! AAATAACAAGTAAAATTAAT+TGG - chr1.4:59748042-59748061 MS.gene40026:CDS 10.0%
!! AAGAATTGTAAGAAAAAAAA+TGG + chr1.4:59748109-59748128 None:intergenic 15.0%
!! TACTAAATAAAAAACATTTC+AGG - chr1.4:59748403-59748422 MS.gene40026:CDS 15.0%
!!! GATCATATATTATTTTTACA+GGG - chr1.4:59748140-59748159 MS.gene40026:CDS 15.0%
!!! TGATCATATATTATTTTTAC+AGG - chr1.4:59748139-59748158 MS.gene40026:CDS 15.0%
!! AATTGGTATTAATTAAACCA+AGG + chr1.4:59747984-59748003 None:intergenic 20.0%
!! ACAAAAATGTGTATAAAGTT+TGG + chr1.4:59747933-59747952 None:intergenic 20.0%
!! ATTGTAAGAAAAAAAATGGA+TGG + chr1.4:59748105-59748124 None:intergenic 20.0%
!! TAAATAAAAAACATTTCAGG+TGG - chr1.4:59748406-59748425 MS.gene40026:CDS 20.0%
! AATACAACATGGATATGAAA+GGG - chr1.4:59748622-59748641 MS.gene40026:intron 25.0%
! ACAATGAGATAAAGAACTAT+TGG - chr1.4:59748463-59748482 MS.gene40026:CDS 25.0%
! CAATTTACCAAGTAGAAATT+TGG + chr1.4:59748070-59748089 None:intergenic 25.0%
! TTCAAATGAAGAGAATTTGT+GGG - chr1.4:59748809-59748828 MS.gene40026:CDS 25.0%
ACTTCTAATGTGAAGTCAAT+TGG + chr1.4:59748001-59748020 None:intergenic 30.0%
ATGAGATAAAGAACTATTGG+AGG - chr1.4:59748466-59748485 MS.gene40026:CDS 30.0%
CAATACAACATGGATATGAA+AGG - chr1.4:59748621-59748640 MS.gene40026:intron 30.0%
CTTCAAATGAAGAGAATTTG+TGG - chr1.4:59748808-59748827 MS.gene40026:CDS 30.0%
TAACATAGTACTTTGTACCT+TGG - chr1.4:59747964-59747983 MS.gene40026:CDS 30.0%
TCTATGCTCAATGATAATAG+TGG - chr1.4:59748765-59748784 MS.gene40026:intron 30.0%
! AAGGTACAAAGTACTATGTT+AGG + chr1.4:59747965-59747984 None:intergenic 30.0%
ACAACAACTGCAATACAACA+TGG - chr1.4:59748611-59748630 MS.gene40026:intron 35.0%
AGAATTTGTGGGATGAACTT+TGG - chr1.4:59748820-59748839 MS.gene40026:CDS 35.0%
CGAAAAATCGTTCTTTCAAG+AGG - chr1.4:59748538-59748557 MS.gene40026:intron 35.0%
CTAGAAACACGTAAGTTCAA+GGG + chr1.4:59748313-59748332 None:intergenic 35.0%
GAAAAGTTGTAGACTGAGAT+GGG - chr1.4:59748177-59748196 MS.gene40026:CDS 35.0%
TAATGGAAGAAGATAGATGG+AGG - chr1.4:59747796-59747815 MS.gene40026:CDS 35.0%
TCTAGAAACACGTAAGTTCA+AGG + chr1.4:59748314-59748333 None:intergenic 35.0%
TTCTCAAGAGACACAAGAAA+TGG - chr1.4:59748698-59748717 MS.gene40026:intron 35.0%
TTCTTGTGTATCAGCATACA+TGG + chr1.4:59748727-59748746 None:intergenic 35.0%
! ATGTATTCAGGAATGATGGA+AGG - chr1.4:59747756-59747775 MS.gene40026:CDS 35.0%
! ATTGGCTCCAAATTTCTACT+TGG - chr1.4:59748060-59748079 MS.gene40026:CDS 35.0%
! GTGTAATGGAAGAAGATAGA+TGG - chr1.4:59747793-59747812 MS.gene40026:CDS 35.0%
AAACACTGGATGGAGTGTAA+TGG - chr1.4:59747779-59747798 MS.gene40026:CDS 40.0%
AACAATTGCAAGAAGCTTGC+CGG - chr1.4:59748431-59748450 MS.gene40026:CDS 40.0%
AGCAACTACATTGTGCACAT+TGG + chr1.4:59748901-59748920 None:intergenic 40.0%
ATCTCATTGTCAGTTCTTCC+CGG + chr1.4:59748453-59748472 None:intergenic 40.0%
ATTGAGTATGTCAAGCTGCA+TGG - chr1.4:59747855-59747874 MS.gene40026:CDS 40.0%
CTAAGACCAGACCTTAAGAA+GGG - chr1.4:59748208-59748227 MS.gene40026:CDS 40.0%
GAAGAAGATAGATGGAGGAA+AGG - chr1.4:59747801-59747820 MS.gene40026:CDS 40.0%
GCTGATACACAAGAACAACA+GGG - chr1.4:59748732-59748751 MS.gene40026:intron 40.0%
GGAAAAGTTGTAGACTGAGA+TGG - chr1.4:59748176-59748195 MS.gene40026:CDS 40.0%
GTGTTATCTGACCCTTCTTA+AGG + chr1.4:59748222-59748241 None:intergenic 40.0%
TAATCCTAGAGCTACATGCT+AGG - chr1.4:59748257-59748276 MS.gene40026:intron 40.0%
TGCTGATACACAAGAACAAC+AGG - chr1.4:59748731-59748750 MS.gene40026:intron 40.0%
TGTGTCTCTTGAGAAGTAGA+AGG + chr1.4:59748693-59748712 None:intergenic 40.0%
TTACAGGGCTGAGAAGAAAT+GGG - chr1.4:59748155-59748174 MS.gene40026:CDS 40.0%
TTTACAGGGCTGAGAAGAAA+TGG - chr1.4:59748154-59748173 MS.gene40026:CDS 40.0%
!! GATCATAGACTTGTTGCTTG+AGG - chr1.4:59748644-59748663 MS.gene40026:intron 40.0%
ACAATTGCAAGAAGCTTGCC+GGG - chr1.4:59748432-59748451 MS.gene40026:CDS 45.0%
ACTACATTGTGCACATTGGC+TGG + chr1.4:59748897-59748916 None:intergenic 45.0%
ATAGATGGAGGAAAGGACCT+TGG - chr1.4:59747808-59747827 MS.gene40026:CDS 45.0%
ATCTGACCCTTCTTAAGGTC+TGG + chr1.4:59748217-59748236 None:intergenic 45.0%
CCTAAGACCAGACCTTAAGA+AGG - chr1.4:59748207-59748226 MS.gene40026:CDS 45.0%
TATGTCAAGCTGCATGGTGA+AGG - chr1.4:59747861-59747880 MS.gene40026:CDS 45.0%
TGATGGAAGGAAACACTGGA+TGG - chr1.4:59747769-59747788 MS.gene40026:CDS 45.0%
TGGAACTTGGATGATGCTCT+TGG - chr1.4:59748840-59748859 MS.gene40026:CDS 45.0%
TTGTCTTCCTCAGAAGTCCA+AGG + chr1.4:59747828-59747847 None:intergenic 45.0%
! AGCACTATCAGAGGGGTTTT+TGG + chr1.4:59748511-59748530 None:intergenic 45.0%
! CCTTCTTAAGGTCTGGTCTT+AGG + chr1.4:59748210-59748229 None:intergenic 45.0%
! CCTTTTCAGCACTATCAGAG+GGG + chr1.4:59748518-59748537 None:intergenic 45.0%
! GCCTTTTCAGCACTATCAGA+GGG + chr1.4:59748519-59748538 None:intergenic 45.0%
! GGAATGATGGAAGGAAACAC+TGG - chr1.4:59747765-59747784 MS.gene40026:CDS 45.0%
!! GTGGGATGAACTTTGGAACT+TGG - chr1.4:59748827-59748846 MS.gene40026:CDS 45.0%
AACTCTGTCTCTAGGCTTGC+AGG - chr1.4:59747891-59747910 MS.gene40026:CDS 50.0%
CCTAGAGCTACATGCTAGGT+GGG - chr1.4:59748261-59748280 MS.gene40026:intron 50.0%
CTAGAGCTACATGCTAGGTG+GGG - chr1.4:59748262-59748281 MS.gene40026:intron 50.0%
GAAAGGACCTTGGACTTCTG+AGG - chr1.4:59747818-59747837 MS.gene40026:CDS 50.0%
GCAGATGGAACTCTGTCTCT+AGG - chr1.4:59747883-59747902 MS.gene40026:CDS 50.0%
TACATGCTAGGTGGGGAAAC+AGG - chr1.4:59748269-59748288 MS.gene40026:intron 50.0%
TCCTAGAGCTACATGCTAGG+TGG - chr1.4:59748260-59748279 MS.gene40026:intron 50.0%
! CCCCTCTGATAGTGCTGAAA+AGG - chr1.4:59748515-59748534 MS.gene40026:intron 50.0%
! CGCCTTTTCAGCACTATCAG+AGG + chr1.4:59748520-59748539 None:intergenic 50.0%
ACCCGTGTCGTAACGCAACA+CGG + chr1.4:59748363-59748382 None:intergenic 55.0%
ACCCGTGTTGCGTTACGACA+CGG - chr1.4:59748358-59748377 MS.gene40026:intron 55.0%
AGCTGCATGGTGAAGGCAGA+TGG - chr1.4:59747868-59747887 MS.gene40026:CDS 55.0%
CCCACCTAGCATGTAGCTCT+AGG + chr1.4:59748264-59748283 None:intergenic 55.0%
CCCGTGTCGTAACGCAACAC+GGG + chr1.4:59748362-59748381 None:intergenic 60.0%
CCCGTGTTGCGTTACGACAC+GGG - chr1.4:59748359-59748378 MS.gene40026:intron 60.0%
GTCGTAACGCAACACGGGTC+TGG + chr1.4:59748357-59748376 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 59747756 59748932 59747756 ID=MS.gene40026
chr1.4 mRNA 59747756 59748932 59747756 ID=MS.gene40026.t1;Parent=MS.gene40026
chr1.4 exon 59748776 59748932 59748776 ID=MS.gene40026.t1.exon1;Parent=MS.gene40026.t1
chr1.4 CDS 59748776 59748932 59748776 ID=cds.MS.gene40026.t1;Parent=MS.gene40026.t1
chr1.4 exon 59748398 59748527 59748398 ID=MS.gene40026.t1.exon2;Parent=MS.gene40026.t1
chr1.4 CDS 59748398 59748527 59748398 ID=cds.MS.gene40026.t1;Parent=MS.gene40026.t1
chr1.4 exon 59747756 59748263 59747756 ID=MS.gene40026.t1.exon3;Parent=MS.gene40026.t1
chr1.4 CDS 59747756 59748263 59747756 ID=cds.MS.gene40026.t1;Parent=MS.gene40026.t1
Gene Sequence

>MS.gene40026

ATGTATTCAGGAATGATGGAAGGAAACACTGGATGGAGTGTAATGGAAGAAGATAGATGGAGGAAAGGACCTTGGACTTCTGAGGAAGACAAATTACTCATTGAGTATGTCAAGCTGCATGGTGAAGGCAGATGGAACTCTGTCTCTAGGCTTGCAGGTACATACATGATACAACCAAACTTTATACACATTTTTGTATTTTAATTCCTAACATAGTACTTTGTACCTTGGTTTAATTAATACCAATTGACTTCACATTAGAAGTGACAGCACAATTATTATAGCAAAATAACAAGTAAAATTAATTGGCTCCAAATTTCTACTTGGTAAATTGACTTCTGTTTTACCATCCATTTTTTTTCTTACAATTCTTAACTCCTTATTGATCATATATTATTTTTACAGGGCTGAGAAGAAATGGGAAAAGTTGTAGACTGAGATGGGTGAACTACCTAAGACCAGACCTTAAGAAGGGTCAGATAACACAACAAGAAGAAAGCATAATCCTAGAGCTACATGCTAGGTGGGGAAACAGGTACAAATTTGAACTATGTCCCTTGAACTTACGTGTTTCTAGACACGTGCAGTGACACTTTATCCAGACCCGTGTTGCGTTACGACACGGGTTAATGCTTCTAGTTGATTATTACTAAATAAAAAACATTTCAGGTGGTCAACAATTGCAAGAAGCTTGCCGGGAAGAACTGACAATGAGATAAAGAACTATTGGAGGACTCATTTCAAGAAAAAGACCAAAAACCCCTCTGATAGTGCTGAAAAGGCGAAAAATCGTTCTTTCAAGAGGCAGCAACAACAACAATTGAAGAAACAACAGCAACAAGTTCAGATGCAGCAACAACAACTGCAATACAACATGGATATGAAAGGGATCATAGACTTGTTGCTTGAGGAAAATGACTACTGTACTAGTGTGCCTTCTACTTCTCAAGAGACACAAGAAATGGTTTCCATGTATGCTGATACACAAGAACAACAGGGTTGCTTTTATTCTATGCTCAATGATAATAGTGGTAATGTCTATGCACAAGAGTCTTCAAATGAAGAGAATTTGTGGGATGAACTTTGGAACTTGGATGATGCTCTTGGAAATTCAATGCAGCTAATGCTTCAAGCAAAGCCAGCCAATGTGCACAATGTAGTTGCTCCCTTTTGTTAA
Protein sequence

>MS.gene40026.t1

MYSGMMEGNTGWSVMEEDRWRKGPWTSEEDKLLIEYVKLHGEGRWNSVSRLAGLRRNGKSCRLRWVNYLRPDLKKGQITQQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKNPSDSAEKAKNRSFKRQQQQQLKKQQQQVQMQQQQLQYNMDMKGIIDLLLEENDYCTSVPSTSQETQEMVSMYADTQEQQGCFYSMLNDNSGNVYAQESSNEENLWDELWNLDDALGNSMQLMLQAKPANVHNVVAPFC