Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40314.t1 | XP_024634048.1 | 93.6 | 596 | 37 | 1 | 1 | 596 | 1 | 595 | 0.00E+00 | 1085.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40314.t1 | Q9SZD1 | 38.5 | 590 | 281 | 18 | 13 | 571 | 24 | 562 | 2.6e-85 | 317.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40314.t1 | A0A072V2F6 | 89.5 | 598 | 59 | 4 | 1 | 596 | 1 | 596 | 5.0e-295 | 1022.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene40314.t1 | TF | CPP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40314.t1 | MTR_3g110122 | 91.973 | 598 | 44 | 4 | 1 | 596 | 1 | 596 | 0.0 | 1096 |
MS.gene40314.t1 | MTR_6g087590 | 45.376 | 465 | 225 | 10 | 125 | 570 | 107 | 561 | 1.15e-116 | 360 |
MS.gene40314.t1 | MTR_8g103320 | 45.227 | 440 | 215 | 11 | 109 | 530 | 44 | 475 | 2.86e-111 | 342 |
MS.gene40314.t1 | MTR_1g012020 | 44.604 | 139 | 73 | 4 | 148 | 282 | 498 | 636 | 1.50e-28 | 121 |
MS.gene40314.t1 | MTR_5g006530 | 48.800 | 125 | 60 | 4 | 148 | 269 | 488 | 611 | 6.01e-27 | 116 |
MS.gene40314.t1 | MTR_5g006530 | 48.800 | 125 | 60 | 4 | 148 | 269 | 264 | 387 | 8.21e-27 | 115 |
MS.gene40314.t1 | MTR_1g103230 | 41.739 | 115 | 63 | 4 | 156 | 267 | 446 | 559 | 7.71e-13 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40314.t1 | AT4G29000 | 40.433 | 554 | 243 | 18 | 13 | 533 | 24 | 523 | 4.05e-112 | 348 |
MS.gene40314.t1 | AT2G20110 | 41.075 | 521 | 246 | 14 | 84 | 590 | 66 | 539 | 5.10e-106 | 330 |
MS.gene40314.t1 | AT2G20110 | 41.551 | 503 | 239 | 13 | 84 | 572 | 66 | 527 | 3.15e-105 | 329 |
MS.gene40314.t1 | AT2G20110 | 40.784 | 510 | 240 | 13 | 84 | 572 | 66 | 534 | 2.88e-103 | 324 |
MS.gene40314.t1 | AT5G25790 | 36.722 | 482 | 248 | 15 | 49 | 524 | 11 | 441 | 9.25e-83 | 267 |
MS.gene40314.t1 | AT5G25790 | 35.714 | 504 | 267 | 15 | 49 | 546 | 11 | 463 | 1.81e-82 | 268 |
MS.gene40314.t1 | AT5G25790 | 36.515 | 482 | 245 | 16 | 49 | 524 | 11 | 437 | 4.06e-82 | 265 |
MS.gene40314.t1 | AT3G16160 | 44.737 | 152 | 80 | 2 | 116 | 266 | 34 | 182 | 3.20e-32 | 128 |
MS.gene40314.t1 | AT3G22760 | 41.401 | 157 | 87 | 3 | 126 | 280 | 186 | 339 | 1.55e-28 | 119 |
MS.gene40314.t1 | AT3G22760 | 41.401 | 157 | 87 | 3 | 126 | 280 | 309 | 462 | 2.33e-28 | 120 |
MS.gene40314.t1 | AT4G14770 | 46.774 | 124 | 64 | 2 | 148 | 269 | 375 | 498 | 4.77e-28 | 119 |
MS.gene40314.t1 | AT4G14770 | 46.774 | 124 | 64 | 2 | 148 | 269 | 356 | 479 | 7.15e-28 | 119 |
MS.gene40314.t1 | AT4G14770 | 46.774 | 124 | 64 | 2 | 148 | 269 | 355 | 478 | 7.32e-28 | 119 |
MS.gene40314.t1 | AT3G22780 | 42.029 | 138 | 78 | 2 | 148 | 283 | 401 | 538 | 1.18e-27 | 118 |
MS.gene40314.t1 | AT3G04850 | 45.968 | 124 | 65 | 2 | 148 | 269 | 453 | 576 | 5.21e-27 | 116 |
Find 126 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACATCAATTTAAGTGTTTC+TGG | 0.101248 | 3.2:+87756553 | None:intergenic |
GCTAAAGTACTTACAATTTA+AGG | 0.107021 | 3.2:+87758400 | None:intergenic |
TTCTCTTCTTGGGTGTTATA+TGG | 0.169921 | 3.2:+87757700 | None:intergenic |
ATTATTATTGGTAGCATTAA+AGG | 0.183098 | 3.2:-87756358 | MS.gene40314:intron |
CATTCCAATTGCCTCCTTTC+GGG | 0.215507 | 3.2:+87758206 | None:intergenic |
ATTTGTCTTTGCAGCTTCTT+TGG | 0.243681 | 3.2:+87757031 | None:intergenic |
GCAACTAATGCTGCCATTAA+TGG | 0.244194 | 3.2:-87757756 | MS.gene40314:CDS |
TCAAAATAAAGCAGGGTTAA+AGG | 0.248253 | 3.2:-87758472 | MS.gene40314:CDS |
TACTTACAATTTAAGGCATT+TGG | 0.284828 | 3.2:+87758407 | None:intergenic |
TCTCTTCTTGGGTGTTATAT+GGG | 0.286069 | 3.2:+87757701 | None:intergenic |
AAAATCACATACCTGAATTT+AGG | 0.297536 | 3.2:+87757208 | None:intergenic |
CTTGGTGAACTGATTATTAT+TGG | 0.298905 | 3.2:-87756370 | MS.gene40314:CDS |
TCATTCCAATTGCCTCCTTT+CGG | 0.299863 | 3.2:+87758205 | None:intergenic |
AAGTCCAACTGCTCCATTAA+TGG | 0.310344 | 3.2:+87757743 | None:intergenic |
TTGATATTGACATTCATAAT+AGG | 0.314713 | 3.2:-87756585 | MS.gene40314:CDS |
GTGTCTGAAATTCAATTAAT+AGG | 0.329611 | 3.2:-87757957 | MS.gene40314:CDS |
GGCTTATCCTGACCAAGTTC+AGG | 0.337443 | 3.2:-87756399 | MS.gene40314:CDS |
TCGGAAATTTGCGCGGCAAT+TGG | 0.338947 | 3.2:-87760005 | MS.gene40314:CDS |
TCCTCCGGCGCAAATGCATT+TGG | 0.349311 | 3.2:-87759876 | MS.gene40314:CDS |
AATAGAAGCTTCATATTTCT+CGG | 0.353823 | 3.2:+87756696 | None:intergenic |
CTACTAACCATAGAAACTTC+TGG | 0.357925 | 3.2:+87758126 | None:intergenic |
TTTGCATGATTCTCCGAAAC+AGG | 0.382385 | 3.2:+87756628 | None:intergenic |
ACCAAGTTCAGGGATGTTCT+TGG | 0.382968 | 3.2:-87756388 | MS.gene40314:CDS |
AACCTCTTCACCGGAAGCTT+TGG | 0.384541 | 3.2:+87759704 | None:intergenic |
AGATGTTGCCAAGCCTGTTT+CGG | 0.392240 | 3.2:-87756641 | MS.gene40314:CDS |
TTCGGTAATGGTTCTGCAAA+TGG | 0.394963 | 3.2:-87756508 | MS.gene40314:CDS |
AACACTCACAATACTTCTTA+AGG | 0.401328 | 3.2:+87757898 | None:intergenic |
TTAATAGGAAGGCACAATAA+AGG | 0.404131 | 3.2:-87757942 | MS.gene40314:CDS |
TAATTTCAAGACCTAAATTC+AGG | 0.410173 | 3.2:-87757219 | MS.gene40314:intron |
GCGTCGGTGGCGACAATGTC+AGG | 0.412454 | 3.2:+87759951 | None:intergenic |
TGTTTCCACGGCCGTCTCAC+TGG | 0.412786 | 3.2:+87759842 | None:intergenic |
GGACTTGGACCCTCCATCTC+TGG | 0.418333 | 3.2:-87757726 | MS.gene40314:CDS |
ATTAATGGAGCAGTTGGACT+TGG | 0.419842 | 3.2:-87757741 | MS.gene40314:CDS |
GCTACCTATGCAAGAACTAA+TGG | 0.420530 | 3.2:-87754672 | MS.gene40314:CDS |
TAAATTGATGTGTGATGAAC+AGG | 0.421391 | 3.2:-87756542 | MS.gene40314:CDS |
AGCCACTGGGATGGAGCAAT+TGG | 0.435821 | 3.2:+87754692 | None:intergenic |
GTACTCCACACCAAAGCTTC+CGG | 0.447922 | 3.2:-87759714 | MS.gene40314:CDS |
TACTGTGAGTGCTATGCAGC+TGG | 0.448205 | 3.2:-87758288 | MS.gene40314:CDS |
AAAGGAAGCTGACAGGGATA+AGG | 0.448296 | 3.2:+87757264 | None:intergenic |
TTCAAATTTCCAGAAATGAG+AGG | 0.459036 | 3.2:-87756742 | MS.gene40314:intron |
CATGACTGCTCAACACCAAC+AGG | 0.463692 | 3.2:-87757628 | MS.gene40314:intron |
ACCAAGAACATCCCTGAACT+TGG | 0.469962 | 3.2:+87756387 | None:intergenic |
TGATAGTGGTGCTGAAACTA+AGG | 0.471033 | 3.2:-87754739 | MS.gene40314:CDS |
CACTGCTGTTTATGCAGAGC+AGG | 0.471249 | 3.2:-87756425 | MS.gene40314:CDS |
CTGTTTATGCAGAGCAGGAA+AGG | 0.476553 | 3.2:-87756420 | MS.gene40314:CDS |
AAGGAAGCTGACAGGGATAA+GGG | 0.478405 | 3.2:+87757265 | None:intergenic |
ATCGAAACTAACTGCGGGCG+CGG | 0.479005 | 3.2:+87759752 | None:intergenic |
TCACAGCCTCAAAATAAAGC+AGG | 0.479128 | 3.2:-87758480 | MS.gene40314:CDS |
GCTGCCCGAAAGGAGGCAAT+TGG | 0.479529 | 3.2:-87758210 | MS.gene40314:CDS |
GTTCTTGCATAGGTAGCCAC+TGG | 0.479534 | 3.2:+87754678 | None:intergenic |
GATAAGGGAGATGAAGCTAT+AGG | 0.479560 | 3.2:+87757280 | None:intergenic |
GAACATCCCTGAACTTGGTC+AGG | 0.480468 | 3.2:+87756392 | None:intergenic |
GATTGAAAATGCGGCATCAC+CGG | 0.492928 | 3.2:+87759776 | None:intergenic |
GGAGAAGAGCGAAACGACGC+TGG | 0.493971 | 3.2:-87760038 | MS.gene40314:CDS |
CGGAAACAAAGGAAGCTGAC+AGG | 0.494375 | 3.2:+87757257 | None:intergenic |
TGTTATATGGGTTCCAGAGA+TGG | 0.499612 | 3.2:+87757713 | None:intergenic |
TGAGGCTGTGATCTAGGGCT+AGG | 0.501431 | 3.2:+87758492 | None:intergenic |
CGACGCTGGATTTAGCTAAT+CGG | 0.509373 | 3.2:-87760024 | MS.gene40314:CDS |
AAAGGATGTCACTGCAAGAA+AGG | 0.510127 | 3.2:-87757924 | MS.gene40314:CDS |
TTGGATTTCGCCGCCGCATG+TGG | 0.510164 | 3.2:-87759986 | MS.gene40314:CDS |
CTTCCGGTTGTTCAATCCGC+AGG | 0.513069 | 3.2:+87754618 | None:intergenic |
TCAAATTTCCAGAAATGAGA+GGG | 0.516415 | 3.2:-87756741 | MS.gene40314:intron |
CTGAAATTCAATTAATAGGA+AGG | 0.519135 | 3.2:-87757953 | MS.gene40314:CDS |
GCTTATCCTGACCAAGTTCA+GGG | 0.520596 | 3.2:-87756398 | MS.gene40314:CDS |
CAAAAGTCTTCCAACTCTGA+TGG | 0.520619 | 3.2:-87756451 | MS.gene40314:CDS |
ATGATTCTCCGAAACAGGCT+TGG | 0.524373 | 3.2:+87756633 | None:intergenic |
AAATGCATTTGCGCCGGAGG+AGG | 0.526333 | 3.2:+87759878 | None:intergenic |
GCTGCCATTAATGGAGCAGT+TGG | 0.529615 | 3.2:-87757747 | MS.gene40314:CDS |
CAGAGCAGAGGACGTTGGCA+TGG | 0.529760 | 3.2:+87757874 | None:intergenic |
AGTCACCAGTGAGACGGCCG+TGG | 0.538539 | 3.2:-87759847 | MS.gene40314:CDS |
CACCAAAGCTTCCGGTGAAG+AGG | 0.538599 | 3.2:-87759706 | MS.gene40314:CDS |
GAAGCTGCAAAGACAAATGC+AGG | 0.539292 | 3.2:-87757026 | MS.gene40314:intron |
TGTGACAGTGACTGCGGCGT+CGG | 0.541888 | 3.2:+87759935 | None:intergenic |
TGTGGTGGTGATTGTTTCCA+CGG | 0.542299 | 3.2:+87759830 | None:intergenic |
AGCGCTTGAAACCTCTTCAC+CGG | 0.544016 | 3.2:+87759695 | None:intergenic |
TTCATGTTGAAGGTCTGTGT+TGG | 0.547492 | 3.2:-87757111 | MS.gene40314:intron |
GGAAGCTTTGGTGTGGAGTA+CGG | 0.547715 | 3.2:+87759716 | None:intergenic |
TCCAAATGCATTTGCGCCGG+AGG | 0.550391 | 3.2:+87759875 | None:intergenic |
CTCTGCTGCTGCCACTGTGG+TGG | 0.557444 | 3.2:+87759815 | None:intergenic |
ACCGTCGGATTTGCCTCCTC+CGG | 0.560178 | 3.2:-87759891 | MS.gene40314:CDS |
GGAGGCAAATCCGACGGTGT+CGG | 0.562332 | 3.2:+87759896 | None:intergenic |
ATAGGCAGTGTCGGAAACAA+AGG | 0.562595 | 3.2:+87757246 | None:intergenic |
GAACAATGAGGCTGCCCGAA+AGG | 0.567258 | 3.2:-87758220 | MS.gene40314:CDS |
TGCATAGGTAGCCACTGGGA+TGG | 0.569627 | 3.2:+87754683 | None:intergenic |
ATGTCCATTAGTTCTTGCAT+AGG | 0.570734 | 3.2:+87754668 | None:intergenic |
GATTTCGCCGCCGCATGTGG+AGG | 0.572850 | 3.2:-87759983 | MS.gene40314:CDS |
AAATGAGAGGGAAAGCTGCT+AGG | 0.574833 | 3.2:-87756729 | MS.gene40314:CDS |
CGGTGTCGGAGGTCGTAGAA+TGG | 0.576418 | 3.2:+87759910 | None:intergenic |
AGCAGTGTATCCATCAGAGT+TGG | 0.576661 | 3.2:+87756441 | None:intergenic |
TAGTCTAGTTCAAATCAGAC+AGG | 0.581100 | 3.2:-87757778 | MS.gene40314:CDS |
TTAAGTGTTTCTGGTGACAG+TGG | 0.589606 | 3.2:+87756562 | None:intergenic |
GGAGGCAATTGGAATGACAC+TGG | 0.589713 | 3.2:-87758199 | MS.gene40314:CDS |
GACAGTGACTGCGGCGTCGG+TGG | 0.593114 | 3.2:+87759938 | None:intergenic |
AAATCCAAATGCATTTGCGC+CGG | 0.594109 | 3.2:+87759872 | None:intergenic |
CTTCACCGGAAGCTTTGGTG+TGG | 0.594505 | 3.2:+87759709 | None:intergenic |
CAATGAGGCTGCCCGAAAGG+AGG | 0.594923 | 3.2:-87758217 | MS.gene40314:CDS |
GAATTATCGAAACTAACTGC+GGG | 0.600420 | 3.2:+87759747 | None:intergenic |
CACAGCCTCAAAATAAAGCA+GGG | 0.602704 | 3.2:-87758479 | MS.gene40314:CDS |
GGAAACAAAGGAAGCTGACA+GGG | 0.605542 | 3.2:+87757258 | None:intergenic |
GGCAAATCCGACGGTGTCGG+AGG | 0.608094 | 3.2:+87759899 | None:intergenic |
TATATGGGTTCCAGAGATGG+AGG | 0.609649 | 3.2:+87757716 | None:intergenic |
GCAGCTGGGATCTATTGTGA+TGG | 0.610068 | 3.2:-87758273 | MS.gene40314:CDS |
GAGAACGTCACAGTCTCCGC+CGG | 0.610187 | 3.2:-87759795 | MS.gene40314:CDS |
GGGCGCGGTGATTGAAAATG+CGG | 0.613912 | 3.2:+87759767 | None:intergenic |
TCTTTCGTTGAGGTTGCCTG+CGG | 0.618808 | 3.2:-87754634 | MS.gene40314:CDS |
ACTGTGAGTGCTATGCAGCT+GGG | 0.620605 | 3.2:-87758287 | MS.gene40314:CDS |
TGATGTGTGATGAACAGGAT+GGG | 0.620967 | 3.2:-87756537 | MS.gene40314:CDS |
ATACTACTGATCTTTCGTTG+AGG | 0.630168 | 3.2:-87754644 | MS.gene40314:CDS |
TTCTTGCATAGGTAGCCACT+GGG | 0.635007 | 3.2:+87754679 | None:intergenic |
TCATAATAATCTGAACAATG+AGG | 0.638704 | 3.2:-87758232 | MS.gene40314:CDS |
TGAAAATGCGGCATCACCGG+CGG | 0.641386 | 3.2:+87759779 | None:intergenic |
GGCGACAATGTCAGGTACGA+CGG | 0.643457 | 3.2:+87759959 | None:intergenic |
GCCGGAGGAGGCAAATCCGA+CGG | 0.645977 | 3.2:+87759890 | None:intergenic |
TCACTCACAGATCAAACTGT+CGG | 0.650466 | 3.2:-87757651 | MS.gene40314:CDS |
ATATGGGTTCCAGAGATGGA+GGG | 0.670217 | 3.2:+87757717 | None:intergenic |
TCTACGACCTCCGACACCGT+CGG | 0.672076 | 3.2:-87759906 | MS.gene40314:CDS |
TTGATGTGTGATGAACAGGA+TGG | 0.672796 | 3.2:-87756538 | MS.gene40314:CDS |
GTTCTCTGCTGCTGCCACTG+TGG | 0.675511 | 3.2:+87759812 | None:intergenic |
TAGCTAATCGGAAATTTGCG+CGG | 0.681451 | 3.2:-87760012 | MS.gene40314:CDS |
CGACGGACCTCCACATGCGG+CGG | 0.682146 | 3.2:+87759976 | None:intergenic |
GTACGACGGACCTCCACATG+CGG | 0.684282 | 3.2:+87759973 | None:intergenic |
TGCCAATTGCTCCATCCCAG+TGG | 0.687073 | 3.2:-87754694 | MS.gene40314:CDS |
GATAGTGGTGCTGAAACTAA+GGG | 0.691174 | 3.2:-87754738 | MS.gene40314:CDS |
TGAATTATCGAAACTAACTG+CGG | 0.715694 | 3.2:+87759746 | None:intergenic |
ATGGTTTGTGACAGTGACTG+CGG | 0.730603 | 3.2:+87759929 | None:intergenic |
GGAAACAATCACCACCACAG+TGG | 0.761756 | 3.2:-87759826 | MS.gene40314:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATGAATATAAAAAAAAAC+CGG | - | chr3.2:87757523-87757542 | MS.gene40314:intron | 10.0% |
!! | TAAAAGATATTAATTACAAT+CGG | + | chr3.2:87757338-87757357 | None:intergenic | 10.0% |
!! | TTATAAAAACTAATAAGATT+TGG | + | chr3.2:87755953-87755972 | None:intergenic | 10.0% |
!!! | ATCTTATTAGTTTTTATAAA+AGG | - | chr3.2:87755954-87755973 | MS.gene40314:intron | 10.0% |
!!! | CTCTTTAAAATTTATAATTT+AGG | + | chr3.2:87759345-87759364 | None:intergenic | 10.0% |
!! | GACGATTAAATTAATAAAAA+TGG | - | chr3.2:87759509-87759528 | MS.gene40314:intron | 15.0% |
!! | TATTAATTTAATCGTCATTA+AGG | + | chr3.2:87759505-87759524 | None:intergenic | 15.0% |
!!! | AAAAAATTAAAGCTACTTTT+AGG | + | chr3.2:87759713-87759732 | None:intergenic | 15.0% |
!!! | AAAAATTAAAGCTACTTTTA+GGG | + | chr3.2:87759712-87759731 | None:intergenic | 15.0% |
!!! | AATGAATTATTGACTTAAAT+TGG | + | chr3.2:87755769-87755788 | None:intergenic | 15.0% |
!!! | AATGATCAGTATATTTTTAT+TGG | + | chr3.2:87756002-87756021 | None:intergenic | 15.0% |
!!! | ATATTGATAGCTAAATTAAT+AGG | + | chr3.2:87757292-87757311 | None:intergenic | 15.0% |
!!! | ATTTTAGTATTAGAAACATA+AGG | - | chr3.2:87755585-87755604 | MS.gene40314:intron | 15.0% |
!!! | GTGTTTTTTTTTTTTTTTTG+TGG | + | chr3.2:87755225-87755244 | None:intergenic | 15.0% |
!!! | TATTGATAGCTAAATTAATA+GGG | + | chr3.2:87757291-87757310 | None:intergenic | 15.0% |
!!! | TGTTGCATTTTATTTATTTT+TGG | - | chr3.2:87755084-87755103 | MS.gene40314:intron | 15.0% |
!! | AAATCAATGTGAAACTAATA+AGG | - | chr3.2:87757169-87757188 | MS.gene40314:intron | 20.0% |
!! | ACATGAAATATTGTTAATTC+CGG | + | chr3.2:87757545-87757564 | None:intergenic | 20.0% |
!! | ATAGATTTCTTGCTTTATAT+CGG | - | chr3.2:87758531-87758550 | MS.gene40314:intron | 20.0% |
!! | GAAAAATACTTGATTCAAAT+GGG | - | chr3.2:87758471-87758490 | MS.gene40314:CDS | 20.0% |
!! | TATAGTATCAATCAAACATA+TGG | + | chr3.2:87759666-87759685 | None:intergenic | 20.0% |
!! | TCAAAAACAAAGCAAAAAAA+TGG | + | chr3.2:87759177-87759196 | None:intergenic | 20.0% |
!! | TGAAAAATACTTGATTCAAA+TGG | - | chr3.2:87758470-87758489 | MS.gene40314:CDS | 20.0% |
!! | TGAGGAAATAAAAAAAATTC+AGG | + | chr3.2:87759631-87759650 | None:intergenic | 20.0% |
!! | TTAACAATATTTCATGTTGA+AGG | - | chr3.2:87757548-87757567 | MS.gene40314:intron | 20.0% |
!! | TTCTTAATATAGAAGTTTGA+TGG | + | chr3.2:87759794-87759813 | None:intergenic | 20.0% |
!! | TTGATATTGACATTCATAAT+AGG | - | chr3.2:87758084-87758103 | MS.gene40314:intron | 20.0% |
!!! | AGGTCTTGAAATTATTTTAT+AGG | + | chr3.2:87757444-87757463 | None:intergenic | 20.0% |
!!! | ATATTTTTATTGGCAAGTTT+AGG | + | chr3.2:87755992-87756011 | None:intergenic | 20.0% |
!!! | ATTATTATTGGTAGCATTAA+AGG | - | chr3.2:87758311-87758330 | MS.gene40314:intron | 20.0% |
!!! | CAAAGTTCTATTTTTAAACA+TGG | + | chr3.2:87755825-87755844 | None:intergenic | 20.0% |
!!! | CTGTCCATTTATATTTTATA+CGG | - | chr3.2:87756026-87756045 | MS.gene40314:intron | 20.0% |
!!! | GTGATTTTTTTTCAATCATT+AGG | - | chr3.2:87757476-87757495 | MS.gene40314:intron | 20.0% |
!!! | TTGTTAATGATTGCATTTTT+GGG | - | chr3.2:87755886-87755905 | MS.gene40314:intron | 20.0% |
!!! | TTTGTTAATGATTGCATTTT+TGG | - | chr3.2:87755885-87755904 | MS.gene40314:intron | 20.0% |
!!! | TTTTGATATCGATAATTTTG+AGG | + | chr3.2:87758989-87759008 | None:intergenic | 20.0% |
! | AAAACAATTACAATGTCAGT+CGG | + | chr3.2:87757908-87757927 | None:intergenic | 25.0% |
! | AAAATCACATACCTGAATTT+AGG | + | chr3.2:87757464-87757483 | None:intergenic | 25.0% |
! | AAACTTAACATCCTAAAAAG+AGG | + | chr3.2:87759202-87759221 | None:intergenic | 25.0% |
! | AAAGCAAGAAATCTATAGAT+GGG | + | chr3.2:87758527-87758546 | None:intergenic | 25.0% |
! | AAATAAAATGCAACACATTC+AGG | + | chr3.2:87755079-87755098 | None:intergenic | 25.0% |
! | AATAGAAGCTTCATATTTCT+CGG | + | chr3.2:87757976-87757995 | None:intergenic | 25.0% |
! | ATAGAAGTTTGATGGAATAA+AGG | + | chr3.2:87759786-87759805 | None:intergenic | 25.0% |
! | ATCAAATGTGTGAAAAAGTA+GGG | + | chr3.2:87757877-87757896 | None:intergenic | 25.0% |
! | ATCAGAAAACACTAGAATAT+AGG | + | chr3.2:87759552-87759571 | None:intergenic | 25.0% |
! | ATGATAAGAATGTTAGTGTA+TGG | - | chr3.2:87755357-87755376 | MS.gene40314:intron | 25.0% |
! | CTGAAATTCAATTAATAGGA+AGG | - | chr3.2:87756716-87756735 | MS.gene40314:CDS | 25.0% |
! | GTTTGTTCAAGACATTTAAA+TGG | + | chr3.2:87756682-87756701 | None:intergenic | 25.0% |
! | TAAAGCAAGAAATCTATAGA+TGG | + | chr3.2:87758528-87758547 | None:intergenic | 25.0% |
! | TAATTTCAAGACCTAAATTC+AGG | - | chr3.2:87757450-87757469 | MS.gene40314:intron | 25.0% |
! | TATAAATTTGCCACTAAACT+AGG | - | chr3.2:87755921-87755940 | MS.gene40314:intron | 25.0% |
! | TATTAGACAAAAAAGAGCTT+AGG | - | chr3.2:87759042-87759061 | MS.gene40314:intron | 25.0% |
! | TCATAATAATCTGAACAATG+AGG | - | chr3.2:87756437-87756456 | MS.gene40314:CDS | 25.0% |
! | TCTTTACATTAGTACTTATG+TGG | + | chr3.2:87755717-87755736 | None:intergenic | 25.0% |
! | TGTATGAAAAACTTTCATCA+AGG | - | chr3.2:87756297-87756316 | MS.gene40314:intron | 25.0% |
! | TTAAATATGTGATGTGATTG+AGG | - | chr3.2:87759285-87759304 | MS.gene40314:intron | 25.0% |
! | TTATCGATATCAAAACCTTT+AGG | - | chr3.2:87758994-87759013 | MS.gene40314:intron | 25.0% |
! | TTATTTAACATCAGTAACCT+GGG | - | chr3.2:87759731-87759750 | MS.gene40314:CDS | 25.0% |
! | TTTATTTAACATCAGTAACC+TGG | - | chr3.2:87759730-87759749 | MS.gene40314:CDS | 25.0% |
!! | AATTTGATGCATCTATTTTG+TGG | - | chr3.2:87757710-87757729 | MS.gene40314:CDS | 25.0% |
!! | AGATAAAACAGTCTTTTTGA+AGG | + | chr3.2:87756055-87756074 | None:intergenic | 25.0% |
!! | ATTGTTATAAAGAAAGTGCA+CGG | + | chr3.2:87756339-87756358 | None:intergenic | 25.0% |
!! | CAAATGGGTTTATATTAAAG+AGG | - | chr3.2:87758486-87758505 | MS.gene40314:CDS | 25.0% |
!! | CATAATTTAGAATGCAGAAT+TGG | - | chr3.2:87755538-87755557 | MS.gene40314:intron | 25.0% |
!! | GATAAAACAGTCTTTTTGAA+GGG | + | chr3.2:87756054-87756073 | None:intergenic | 25.0% |
!! | GCTAAAGTACTTACAATTTA+AGG | + | chr3.2:87756272-87756291 | None:intergenic | 25.0% |
!! | GTGTCTGAAATTCAATTAAT+AGG | - | chr3.2:87756712-87756731 | MS.gene40314:CDS | 25.0% |
!! | TACTTACAATTTAAGGCATT+TGG | + | chr3.2:87756265-87756284 | None:intergenic | 25.0% |
!!! | AACTAAGAAGTTGATAAATG+CGG | + | chr3.2:87757228-87757247 | None:intergenic | 25.0% |
!!! | AATTATTTTATAGGCAGTGT+CGG | + | chr3.2:87757435-87757454 | None:intergenic | 25.0% |
!!! | AGAACTTTTAAAGATATGGA+TGG | - | chr3.2:87755691-87755710 | MS.gene40314:intron | 25.0% |
!!! | ATAAAACAGTCTTTTTGAAG+GGG | + | chr3.2:87756053-87756072 | None:intergenic | 25.0% |
!!! | GATCTTTTTTATGATAGAGA+GGG | + | chr3.2:87758964-87758983 | None:intergenic | 25.0% |
!!! | TCTTTTATTTTTTCCCAGAA+TGG | - | chr3.2:87759596-87759615 | MS.gene40314:intron | 25.0% |
!!! | TGATCTTTTTTATGATAGAG+AGG | + | chr3.2:87758965-87758984 | None:intergenic | 25.0% |
!!! | TTGGAGAACTTTTAAAGATA+TGG | - | chr3.2:87755687-87755706 | MS.gene40314:intron | 25.0% |
!!! | TTTGCAATTTTGACATTGTT+GGG | - | chr3.2:87758363-87758382 | MS.gene40314:intron | 25.0% |
AAATTAATAGGGAAGTAGCA+AGG | + | chr3.2:87757280-87757299 | None:intergenic | 30.0% | |
AACACACTTAAAGAATACGA+AGG | + | chr3.2:87759473-87759492 | None:intergenic | 30.0% | |
AACACTCACAATACTTCTTA+AGG | + | chr3.2:87756774-87756793 | None:intergenic | 30.0% | |
AATGCAGAATTGGATGTATT+AGG | - | chr3.2:87755548-87755567 | MS.gene40314:intron | 30.0% | |
ACGTCAACTATAAATACATG+AGG | + | chr3.2:87756582-87756601 | None:intergenic | 30.0% | |
ATACAATGTATTGAGTGTGT+TGG | + | chr3.2:87759135-87759154 | None:intergenic | 30.0% | |
ATGCAATCATTAACAAACCT+CGG | + | chr3.2:87755882-87755901 | None:intergenic | 30.0% | |
ATGCAGAATTGGATGTATTA+GGG | - | chr3.2:87755549-87755568 | MS.gene40314:intron | 30.0% | |
ATGTATTAGGGATGTATGTT+TGG | - | chr3.2:87755561-87755580 | MS.gene40314:intron | 30.0% | |
ATTATAAACCCATACACAAG+TGG | - | chr3.2:87755130-87755149 | MS.gene40314:intron | 30.0% | |
CAACAATGTCAAAATTGCAA+AGG | + | chr3.2:87758364-87758383 | None:intergenic | 30.0% | |
CACATCAATTTAAGTGTTTC+TGG | + | chr3.2:87758119-87758138 | None:intergenic | 30.0% | |
CCAAACATAGTGAATTTGAA+TGG | + | chr3.2:87757144-87757163 | None:intergenic | 30.0% | |
CCATTCAAATTCACTATGTT+TGG | - | chr3.2:87757141-87757160 | MS.gene40314:intron | 30.0% | |
CGTCAACTATAAATACATGA+GGG | + | chr3.2:87756581-87756600 | None:intergenic | 30.0% | |
CTAATATAGAAAGATGTTCC+TGG | + | chr3.2:87759028-87759047 | None:intergenic | 30.0% | |
CTTGGTGAACTGATTATTAT+TGG | - | chr3.2:87758299-87758318 | MS.gene40314:intron | 30.0% | |
GAAGAAAATGGTGATAAGTA+TGG | - | chr3.2:87758865-87758884 | MS.gene40314:intron | 30.0% | |
GACAATGCATAATATATGCA+AGG | - | chr3.2:87755177-87755196 | MS.gene40314:intron | 30.0% | |
GAGAAAACACCTAAAAACAA+TGG | - | chr3.2:87759907-87759926 | MS.gene40314:CDS | 30.0% | |
GATCAAATGTGTGAAAAAGT+AGG | + | chr3.2:87757878-87757897 | None:intergenic | 30.0% | |
GCTTCTTTGCATTATTGATA+CGG | - | chr3.2:87757065-87757084 | MS.gene40314:CDS | 30.0% | |
GGGACCGTATAAAATATAAA+TGG | + | chr3.2:87756033-87756052 | None:intergenic | 30.0% | |
TAAATGTCTTGAACAAACTC+AGG | - | chr3.2:87756684-87756703 | MS.gene40314:CDS | 30.0% | |
TAAATTGATGTGTGATGAAC+AGG | - | chr3.2:87758127-87758146 | MS.gene40314:intron | 30.0% | |
TACAATGTATTGAGTGTGTT+GGG | + | chr3.2:87759134-87759153 | None:intergenic | 30.0% | |
TAGCTTCTATTTGAAGACAA+GGG | - | chr3.2:87755622-87755641 | MS.gene40314:intron | 30.0% | |
TAGTTACTCTTTCTGTTGTA+GGG | - | chr3.2:87757115-87757134 | MS.gene40314:intron | 30.0% | |
TCAAAATAAAGCAGGGTTAA+AGG | - | chr3.2:87756197-87756216 | MS.gene40314:intron | 30.0% | |
TCAAATGTGTGAAAAAGTAG+GGG | + | chr3.2:87757876-87757895 | None:intergenic | 30.0% | |
TCAAATTTCCAGAAATGAGA+GGG | - | chr3.2:87757928-87757947 | MS.gene40314:CDS | 30.0% | |
TCCTGTCTTAAATATACATG+TGG | - | chr3.2:87758406-87758425 | MS.gene40314:intron | 30.0% | |
TGAAATTAAGAACGTCAAGT+TGG | - | chr3.2:87758742-87758761 | MS.gene40314:intron | 30.0% | |
TGAATTATCGAAACTAACTG+CGG | + | chr3.2:87754926-87754945 | None:intergenic | 30.0% | |
TTAATCGTCATTAAGGAGTA+AGG | + | chr3.2:87759498-87759517 | None:intergenic | 30.0% | |
TTAGCTTCTATTTGAAGACA+AGG | - | chr3.2:87755621-87755640 | MS.gene40314:intron | 30.0% | |
TTAGTTACTCTTTCTGTTGT+AGG | - | chr3.2:87757114-87757133 | MS.gene40314:intron | 30.0% | |
TTCAAATTTCCAGAAATGAG+AGG | - | chr3.2:87757927-87757946 | MS.gene40314:CDS | 30.0% | |
TTTCCACAACTGAAAAATCA+AGG | - | chr3.2:87759244-87759263 | MS.gene40314:intron | 30.0% | |
! | AAAATCCAGGAAAGTTTTTC+TGG | - | chr3.2:87756991-87757010 | MS.gene40314:intron | 30.0% |
! | ACACTCTAAAGAAGCAAAAA+CGG | - | chr3.2:87756223-87756242 | MS.gene40314:intron | 30.0% |
! | ACCACATGTATATTTAAGAC+AGG | + | chr3.2:87758410-87758429 | None:intergenic | 30.0% |
! | ATTGACTGCAAGAATTTTGA+AGG | - | chr3.2:87756832-87756851 | MS.gene40314:intron | 30.0% |
! | ATTTACAATTTTCAGAGCAG+AGG | + | chr3.2:87756810-87756829 | None:intergenic | 30.0% |
! | TAACAATTTCGGCATTTTGA+CGG | - | chr3.2:87755296-87755315 | MS.gene40314:intron | 30.0% |
! | TATTGGTAGCATTAAAGGTT+AGG | - | chr3.2:87758316-87758335 | MS.gene40314:intron | 30.0% |
! | TTAATAGGAAGGCACAATAA+AGG | - | chr3.2:87756727-87756746 | MS.gene40314:CDS | 30.0% |
! | TTTCCAAATTTTATGCTGCT+AGG | - | chr3.2:87757770-87757789 | MS.gene40314:CDS | 30.0% |
!! | ACTAAGAAGTTGATAAATGC+GGG | + | chr3.2:87757227-87757246 | None:intergenic | 30.0% |
!! | CGCTATCTTGAATTTTAATC+AGG | - | chr3.2:87757358-87757377 | MS.gene40314:intron | 30.0% |
!! | CTTTGCAATTTTGACATTGT+TGG | - | chr3.2:87758362-87758381 | MS.gene40314:intron | 30.0% |
!! | GGTGCTGTTAATAACTATTA+TGG | - | chr3.2:87756625-87756644 | MS.gene40314:CDS | 30.0% |
!! | TACTAATGTAAAGAGCATCA+GGG | - | chr3.2:87755723-87755742 | MS.gene40314:intron | 30.0% |
!! | TTGCAATTTTGACATTGTTG+GGG | - | chr3.2:87758364-87758383 | MS.gene40314:intron | 30.0% |
!! | TTTTTCAATCATTAGGTGAG+CGG | - | chr3.2:87757483-87757502 | MS.gene40314:intron | 30.0% |
!!! | ATAGAAACTTCTGGTTTTTG+CGG | + | chr3.2:87756537-87756556 | None:intergenic | 30.0% |
!!! | ATTTTTGGTCTGAAAGCATT+TGG | + | chr3.2:87756504-87756523 | None:intergenic | 30.0% |
!!! | CTGATATTTTAGCTTACTTG+TGG | - | chr3.2:87756654-87756673 | MS.gene40314:CDS | 30.0% |
!!! | TGTTTTTGAGACCTCTTTTT+AGG | - | chr3.2:87759188-87759207 | MS.gene40314:intron | 30.0% |
!!! | TTAGTTCTGTTTTAATCCCT+TGG | - | chr3.2:87757242-87757261 | MS.gene40314:CDS | 30.0% |
!!! | TTTAACCCTGCTTTATTTTG+AGG | + | chr3.2:87756198-87756217 | None:intergenic | 30.0% |
!!! | TTTTTTTTTTGTGGTGTTCG+AGG | + | chr3.2:87755216-87755235 | None:intergenic | 30.0% |
AAAAAGATTCTTGGCTCATG+AGG | + | chr3.2:87758589-87758608 | None:intergenic | 35.0% | |
AAAACACCATACACAAGTGA+AGG | - | chr3.2:87755238-87755257 | MS.gene40314:intron | 35.0% | |
AAGCGTAATGCATCATAAAG+AGG | + | chr3.2:87758672-87758691 | None:intergenic | 35.0% | |
AGAAATCTATAGATGGGTCA+CGG | + | chr3.2:87758521-87758540 | None:intergenic | 35.0% | |
ATACTACTGATCTTTCGTTG+AGG | - | chr3.2:87760025-87760044 | MS.gene40314:CDS | 35.0% | |
ATATGGCTAAAGATGAACTG+AGG | + | chr3.2:87759649-87759668 | None:intergenic | 35.0% | |
ATGTGAGTGAGACAAAAAGA+TGG | + | chr3.2:87758563-87758582 | None:intergenic | 35.0% | |
ATTTGCCAGAAAAACTTTCC+TGG | + | chr3.2:87756999-87757018 | None:intergenic | 35.0% | |
ATTTGTCTTTGCAGCTTCTT+TGG | + | chr3.2:87757641-87757660 | None:intergenic | 35.0% | |
CATTATTGATACGGTTTCGT+TGG | - | chr3.2:87757074-87757093 | MS.gene40314:CDS | 35.0% | |
CCTAAAAACAATGGTGATAG+TGG | - | chr3.2:87759916-87759935 | MS.gene40314:CDS | 35.0% | |
CCTAGGTAAAAGACTGTAAA+TGG | - | chr3.2:87758936-87758955 | MS.gene40314:intron | 35.0% | |
CTACTAACCATAGAAACTTC+TGG | + | chr3.2:87756546-87756565 | None:intergenic | 35.0% | |
GAATTATCGAAACTAACTGC+GGG | + | chr3.2:87754925-87754944 | None:intergenic | 35.0% | |
GCAAAAACCAGAAGTTTCTA+TGG | - | chr3.2:87756536-87756555 | MS.gene40314:CDS | 35.0% | |
GTCAAAATGCCGAAATTGTT+AGG | + | chr3.2:87755297-87755316 | None:intergenic | 35.0% | |
GTTGTTCGACCTAACAATTT+CGG | - | chr3.2:87755285-87755304 | MS.gene40314:intron | 35.0% | |
TAATTAACCACACGTTGTGT+TGG | - | chr3.2:87755432-87755451 | MS.gene40314:intron | 35.0% | |
TAGAAACATAAGGCTTATGC+TGG | - | chr3.2:87755595-87755614 | MS.gene40314:intron | 35.0% | |
TCACCATGCAAAAAGATTCT+TGG | + | chr3.2:87758598-87758617 | None:intergenic | 35.0% | |
TCTGAATCAAGAAGCAATTC+TGG | - | chr3.2:87758834-87758853 | MS.gene40314:intron | 35.0% | |
TGCATCAGTGAGCTAAAATT+TGG | - | chr3.2:87756604-87756623 | MS.gene40314:CDS | 35.0% | |
TGTCCTAGCAGCATAAAATT+TGG | + | chr3.2:87757776-87757795 | None:intergenic | 35.0% | |
TTAAATGCAACACAATCCAC+AGG | + | chr3.2:87755333-87755352 | None:intergenic | 35.0% | |
TTCCTGGATAACTATCCTAA+AGG | + | chr3.2:87759012-87759031 | None:intergenic | 35.0% | |
! | AAGGAAATTGATGGTTCCAA+GGG | + | chr3.2:87757261-87757280 | None:intergenic | 35.0% |
! | AATCTTTTTGCATGGTGAGA+TGG | - | chr3.2:87758600-87758619 | MS.gene40314:intron | 35.0% |
! | ATCTTTTTGCATGGTGAGAT+GGG | - | chr3.2:87758601-87758620 | MS.gene40314:intron | 35.0% |
! | ATGTCCATTAGTTCTTGCAT+AGG | + | chr3.2:87760004-87760023 | None:intergenic | 35.0% |
! | CCATTTACAGTCTTTTACCT+AGG | + | chr3.2:87758939-87758958 | None:intergenic | 35.0% |
! | CTTATCACCATTTTCTTCCT+TGG | + | chr3.2:87758863-87758882 | None:intergenic | 35.0% |
! | GATTTTTCACATTCTGTGTC+TGG | + | chr3.2:87757594-87757613 | None:intergenic | 35.0% |
! | TAGCTAATTTTGCAACTGCA+AGG | - | chr3.2:87756358-87756377 | MS.gene40314:intron | 35.0% |
! | TAGTCTAGTTCAAATCAGAC+AGG | - | chr3.2:87756891-87756910 | MS.gene40314:intron | 35.0% |
! | TCCTGGATTTTTCTCTTCTT+GGG | + | chr3.2:87756982-87757001 | None:intergenic | 35.0% |
! | TCTCTTCTTGGGTGTTATAT+GGG | + | chr3.2:87756971-87756990 | None:intergenic | 35.0% |
! | TTCCTGGATTTTTCTCTTCT+TGG | + | chr3.2:87756983-87757002 | None:intergenic | 35.0% |
! | TTCTCTTCTTGGGTGTTATA+TGG | + | chr3.2:87756972-87756991 | None:intergenic | 35.0% |
! | TTGATGCATCTATTTTGTGG+TGG | - | chr3.2:87757713-87757732 | MS.gene40314:CDS | 35.0% |
!! | AACCTTTAGGATAGTTATCC+AGG | - | chr3.2:87759007-87759026 | MS.gene40314:intron | 35.0% |
!! | ATTTTGAAGGAAGTGACGAA+TGG | - | chr3.2:87756845-87756864 | MS.gene40314:intron | 35.0% |
!! | CCACTATCACCATTGTTTTT+AGG | + | chr3.2:87759919-87759938 | None:intergenic | 35.0% |
!! | CTAAGAAGTTGATAAATGCG+GGG | + | chr3.2:87757226-87757245 | None:intergenic | 35.0% |
!! | CTTCCTTGATTTTTCAGTTG+TGG | + | chr3.2:87759250-87759269 | None:intergenic | 35.0% |
!! | GTACTAATGTAAAGAGCATC+AGG | - | chr3.2:87755722-87755741 | MS.gene40314:intron | 35.0% |
!! | TGCAATTTTGACATTGTTGG+GGG | - | chr3.2:87758365-87758384 | MS.gene40314:intron | 35.0% |
!! | TTTTTCAGCTATGTCAAACG+AGG | + | chr3.2:87758457-87758476 | None:intergenic | 35.0% |
!!! | TATTTTGAGGCTGTGATCTA+GGG | + | chr3.2:87756185-87756204 | None:intergenic | 35.0% |
!!! | TTATTTTGAGGCTGTGATCT+AGG | + | chr3.2:87756186-87756205 | None:intergenic | 35.0% |
!!! | TTATTTTTTCCCAGAATGGC+TGG | - | chr3.2:87759600-87759619 | MS.gene40314:intron | 35.0% |
AAAGGATGTCACTGCAAGAA+AGG | - | chr3.2:87756745-87756764 | MS.gene40314:intron | 40.0% | |
AAATCCAAATGCATTTGCGC+CGG | + | chr3.2:87754800-87754819 | None:intergenic | 40.0% | |
AAGTCCAACTGCTCCATTAA+TGG | + | chr3.2:87756929-87756948 | None:intergenic | 40.0% | |
ACCCAAGAAGAGAAAAATCC+AGG | - | chr3.2:87756978-87756997 | MS.gene40314:intron | 40.0% | |
AGATTGCAGAAGCAGAAAGT+GGG | - | chr3.2:87759387-87759406 | MS.gene40314:intron | 40.0% | |
ATCATAAAGAGGCCAGGTAT+GGG | + | chr3.2:87758661-87758680 | None:intergenic | 40.0% | |
ATGTCTTGAACAAACTCAGG+AGG | - | chr3.2:87756687-87756706 | MS.gene40314:CDS | 40.0% | |
ATGTGTGAAAAAGTAGGGGA+CGG | + | chr3.2:87757872-87757891 | None:intergenic | 40.0% | |
ATTAATGGAGCAGTTGGACT+TGG | - | chr3.2:87756928-87756947 | MS.gene40314:intron | 40.0% | |
CAAAAGTCTTCCAACTCTGA+TGG | - | chr3.2:87758218-87758237 | MS.gene40314:CDS | 40.0% | |
CACAGCCTCAAAATAAAGCA+GGG | - | chr3.2:87756190-87756209 | MS.gene40314:intron | 40.0% | |
CACTGCTATGGGTGAATATA+TGG | + | chr3.2:87758786-87758805 | None:intergenic | 40.0% | |
GAAATCTATAGATGGGTCAC+GGG | + | chr3.2:87758520-87758539 | None:intergenic | 40.0% | |
GATAAGGGAGATGAAGCTAT+AGG | + | chr3.2:87757392-87757411 | None:intergenic | 40.0% | |
GATGATGCTACAAAGTAAGC+TGG | + | chr3.2:87758712-87758731 | None:intergenic | 40.0% | |
GCAACTAATGCTGCCATTAA+TGG | - | chr3.2:87756913-87756932 | MS.gene40314:intron | 40.0% | |
GCTACCTATGCAAGAACTAA+TGG | - | chr3.2:87759997-87760016 | MS.gene40314:CDS | 40.0% | |
GGAAGTAGCAAGGAAATTGA+TGG | + | chr3.2:87757270-87757289 | None:intergenic | 40.0% | |
GTTGGGGGAAAAATTAACTC+AGG | - | chr3.2:87758380-87758399 | MS.gene40314:intron | 40.0% | |
TAATGCATCATAAAGAGGCC+AGG | + | chr3.2:87758667-87758686 | None:intergenic | 40.0% | |
TAGCTAATCGGAAATTTGCG+CGG | - | chr3.2:87754657-87754676 | MS.gene40314:CDS | 40.0% | |
TCACAGCCTCAAAATAAAGC+AGG | - | chr3.2:87756189-87756208 | MS.gene40314:intron | 40.0% | |
TCACTCACAGATCAAACTGT+CGG | - | chr3.2:87757018-87757037 | MS.gene40314:intron | 40.0% | |
TCATTCCAATTGCCTCCTTT+CGG | + | chr3.2:87756467-87756486 | None:intergenic | 40.0% | |
TCTGTTCTGTCTCTCTCTTT+GGG | - | chr3.2:87759428-87759447 | MS.gene40314:intron | 40.0% | |
TGATGTGTGATGAACAGGAT+GGG | - | chr3.2:87758132-87758151 | MS.gene40314:intron | 40.0% | |
TGTTATATGGGTTCCAGAGA+TGG | + | chr3.2:87756959-87756978 | None:intergenic | 40.0% | |
TGTTGATGCATATCGAACAC+CGG | - | chr3.2:87755455-87755474 | MS.gene40314:intron | 40.0% | |
TTCATGTTGAAGGTCTGTGT+TGG | - | chr3.2:87757558-87757577 | MS.gene40314:intron | 40.0% | |
TTGATGTGTGATGAACAGGA+TGG | - | chr3.2:87758131-87758150 | MS.gene40314:intron | 40.0% | |
TTTGCATGATTCTCCGAAAC+AGG | + | chr3.2:87758044-87758063 | None:intergenic | 40.0% | |
! | ATTTTCAGTCACCAGTGAGA+CGG | - | chr3.2:87754816-87754835 | MS.gene40314:intron | 40.0% |
! | CAAGGAAATTGATGGTTCCA+AGG | + | chr3.2:87757262-87757281 | None:intergenic | 40.0% |
! | CAAGGAAGCGCATTGTTATT+TGG | - | chr3.2:87759262-87759281 | MS.gene40314:intron | 40.0% |
! | GAACAGGATGGGATGTTTTT+CGG | - | chr3.2:87758143-87758162 | MS.gene40314:CDS | 40.0% |
! | GAGCCAAGAATCTTTTTGCA+TGG | - | chr3.2:87758592-87758611 | MS.gene40314:intron | 40.0% |
! | GATAGTGGTGCTGAAACTAA+GGG | - | chr3.2:87759931-87759950 | MS.gene40314:CDS | 40.0% |
! | TGTGCGAAAAGCATGATTCT+TGG | - | chr3.2:87755668-87755687 | MS.gene40314:intron | 40.0% |
! | TTCGGTAATGGTTCTGCAAA+TGG | - | chr3.2:87758161-87758180 | MS.gene40314:CDS | 40.0% |
! | TTGGTGATTGCCTAGTTTAG+TGG | + | chr3.2:87755934-87755953 | None:intergenic | 40.0% |
! | TTTTCACATTCTGTGTCTGG+AGG | + | chr3.2:87757591-87757610 | None:intergenic | 40.0% |
!! | GATGGGATGTTTTTCGGTAA+TGG | - | chr3.2:87758149-87758168 | MS.gene40314:CDS | 40.0% |
!! | TAATGCAAAGAAGCACCTGT+TGG | + | chr3.2:87757059-87757078 | None:intergenic | 40.0% |
!! | TGATAGTGGTGCTGAAACTA+AGG | - | chr3.2:87759930-87759949 | MS.gene40314:CDS | 40.0% |
!! | TTAAGTGTTTCTGGTGACAG+TGG | + | chr3.2:87758110-87758129 | None:intergenic | 40.0% |
!!! | TGCAGGTTTTGACTAACACA+TGG | - | chr3.2:87757660-87757679 | MS.gene40314:CDS | 40.0% |
AAAGGAAGCTGACAGGGATA+AGG | + | chr3.2:87757408-87757427 | None:intergenic | 45.0% | |
AAATGAGAGGGAAAGCTGCT+AGG | - | chr3.2:87757940-87757959 | MS.gene40314:CDS | 45.0% | |
AAGGAAGCTGACAGGGATAA+GGG | + | chr3.2:87757407-87757426 | None:intergenic | 45.0% | |
ACAACAAGGTGACACTGCTA+TGG | + | chr3.2:87758798-87758817 | None:intergenic | 45.0% | |
ACCAAGAACATCCCTGAACT+TGG | + | chr3.2:87758285-87758304 | None:intergenic | 45.0% | |
ACCAAGTTCAGGGATGTTCT+TGG | - | chr3.2:87758281-87758300 | MS.gene40314:CDS | 45.0% | |
AGAAGCAATTCTGGTCACCA+AGG | - | chr3.2:87758843-87758862 | MS.gene40314:intron | 45.0% | |
AGATGTTGCCAAGCCTGTTT+CGG | - | chr3.2:87758028-87758047 | MS.gene40314:intron | 45.0% | |
AGCAGTGTATCCATCAGAGT+TGG | + | chr3.2:87758231-87758250 | None:intergenic | 45.0% | |
ATATGGGTTCCAGAGATGGA+GGG | + | chr3.2:87756955-87756974 | None:intergenic | 45.0% | |
ATCAACACCAACACAACGTG+TGG | + | chr3.2:87755442-87755461 | None:intergenic | 45.0% | |
ATGATTCTCCGAAACAGGCT+TGG | + | chr3.2:87758039-87758058 | None:intergenic | 45.0% | |
CAACAAGGTGACACTGCTAT+GGG | + | chr3.2:87758797-87758816 | None:intergenic | 45.0% | |
CACTTTCTGCTTCTGCAATC+TGG | + | chr3.2:87759388-87759407 | None:intergenic | 45.0% | |
CAGATTGCAGAAGCAGAAAG+TGG | - | chr3.2:87759386-87759405 | MS.gene40314:intron | 45.0% | |
CATCATAAAGAGGCCAGGTA+TGG | + | chr3.2:87758662-87758681 | None:intergenic | 45.0% | |
CATTATTCTTGCAGTTGCCC+AGG | + | chr3.2:87759751-87759770 | None:intergenic | 45.0% | |
CATTCCAATTGCCTCCTTTC+GGG | + | chr3.2:87756466-87756485 | None:intergenic | 45.0% | |
CCAACACCTTCACTTGTGTA+TGG | + | chr3.2:87755247-87755266 | None:intergenic | 45.0% | |
CCTTACCAAAGCTAAGCTCA+CGG | + | chr3.2:87755158-87755177 | None:intergenic | 45.0% | |
CGACGCTGGATTTAGCTAAT+CGG | - | chr3.2:87754645-87754664 | MS.gene40314:CDS | 45.0% | |
CTCTGTTCTGTCTCTCTCTT+TGG | - | chr3.2:87759427-87759446 | MS.gene40314:intron | 45.0% | |
CTGGTCACCAAGGAAGAAAA+TGG | - | chr3.2:87758853-87758872 | MS.gene40314:intron | 45.0% | |
CTGTTCTGTCTCTCTCTTTG+GGG | - | chr3.2:87759429-87759448 | MS.gene40314:intron | 45.0% | |
CTGTTTATGCAGAGCAGGAA+AGG | - | chr3.2:87758249-87758268 | MS.gene40314:CDS | 45.0% | |
CTTACCAAAGCTAAGCTCAC+GGG | + | chr3.2:87755157-87755176 | None:intergenic | 45.0% | |
GAAGCTGCAAAGACAAATGC+AGG | - | chr3.2:87757643-87757662 | MS.gene40314:CDS | 45.0% | |
GATTGAAAATGCGGCATCAC+CGG | + | chr3.2:87754896-87754915 | None:intergenic | 45.0% | |
GCTTATCCTGACCAAGTTCA+GGG | - | chr3.2:87758271-87758290 | MS.gene40314:CDS | 45.0% | |
GGAAACAAAGGAAGCTGACA+GGG | + | chr3.2:87757414-87757433 | None:intergenic | 45.0% | |
GTTAGGTCGAACAACATGAC+CGG | + | chr3.2:87755280-87755299 | None:intergenic | 45.0% | |
TAAGCCGATGCATGACAACA+AGG | + | chr3.2:87758812-87758831 | None:intergenic | 45.0% | |
TACAATCGGATGTCAGAGCA+TGG | + | chr3.2:87757324-87757343 | None:intergenic | 45.0% | |
TATATGGGTTCCAGAGATGG+AGG | + | chr3.2:87756956-87756975 | None:intergenic | 45.0% | |
TGTGTGAAAAAGTAGGGGAC+GGG | + | chr3.2:87757871-87757890 | None:intergenic | 45.0% | |
TTACCAAAGCTAAGCTCACG+GGG | + | chr3.2:87755156-87755175 | None:intergenic | 45.0% | |
TTAGGTCGAACAACATGACC+GGG | + | chr3.2:87755279-87755298 | None:intergenic | 45.0% | |
TTCTTGCATAGGTAGCCACT+GGG | + | chr3.2:87759993-87760012 | None:intergenic | 45.0% | |
! | ATAGGCAGTGTCGGAAACAA+AGG | + | chr3.2:87757426-87757445 | None:intergenic | 45.0% |
! | ATGGTTTGTGACAGTGACTG+CGG | + | chr3.2:87754743-87754762 | None:intergenic | 45.0% |
! | ATTTTCAGAGCAGAGGACGT+TGG | + | chr3.2:87756803-87756822 | None:intergenic | 45.0% |
! | CAGTCTTTTACCTAGGAACG+AGG | + | chr3.2:87758932-87758951 | None:intergenic | 45.0% |
! | CCATACACAAGTGAAGGTGT+TGG | - | chr3.2:87755244-87755263 | MS.gene40314:intron | 45.0% |
! | CTCCATACGAAAAGTGTGTC+CGG | + | chr3.2:87755477-87755496 | None:intergenic | 45.0% |
! | GTCACCTTGTTGTCATGCAT+CGG | - | chr3.2:87758805-87758824 | MS.gene40314:intron | 45.0% |
! | TGTGGTGGTGATTGTTTCCA+CGG | + | chr3.2:87754842-87754861 | None:intergenic | 45.0% |
!! | TGCGGACTGCTTGCAATTTT+TGG | + | chr3.2:87756519-87756538 | None:intergenic | 45.0% |
!! | TGGGCATATTGATTCAGCTG+AGG | - | chr3.2:87758620-87758639 | MS.gene40314:intron | 45.0% |
!!! | TTTTTTCCCAGAATGGCTGG+TGG | - | chr3.2:87759603-87759622 | MS.gene40314:intron | 45.0% |
!!! | TCTTTAAAATTTATAATTTA+GGG | + | chr3.2:87759344-87759363 | None:intergenic | 5.0% |
AACCTCTTCACCGGAAGCTT+TGG | + | chr3.2:87754968-87754987 | None:intergenic | 50.0% | |
ACTGTGAGTGCTATGCAGCT+GGG | - | chr3.2:87756382-87756401 | MS.gene40314:CDS | 50.0% | |
AGCGCTTGAAACCTCTTCAC+CGG | + | chr3.2:87754977-87754996 | None:intergenic | 50.0% | |
CATGACTGCTCAACACCAAC+AGG | - | chr3.2:87757041-87757060 | MS.gene40314:CDS | 50.0% | |
CCAGGTATGGGTGTACTACA+TGG | + | chr3.2:87758649-87758668 | None:intergenic | 50.0% | |
CCATGTAGTACACCCATACC+TGG | - | chr3.2:87758646-87758665 | MS.gene40314:intron | 50.0% | |
CGGAAACAAAGGAAGCTGAC+AGG | + | chr3.2:87757415-87757434 | None:intergenic | 50.0% | |
GAACATCCCTGAACTTGGTC+AGG | + | chr3.2:87758280-87758299 | None:intergenic | 50.0% | |
GAGCATCAGGGATGAAAGTC+TGG | - | chr3.2:87755735-87755754 | MS.gene40314:intron | 50.0% | |
GCAATCTGAGCATCATTCCG+AGG | - | chr3.2:87755862-87755881 | MS.gene40314:intron | 50.0% | |
GCAGCTGGGATCTATTGTGA+TGG | - | chr3.2:87756396-87756415 | MS.gene40314:CDS | 50.0% | |
GCAGCTTTCCCTCTCATTTC+TGG | + | chr3.2:87757939-87757958 | None:intergenic | 50.0% | |
GCTAGGAGACTCGTTTCTGA+AGG | + | chr3.2:87756163-87756182 | None:intergenic | 50.0% | |
GCTGCCATTAATGGAGCAGT+TGG | - | chr3.2:87756922-87756941 | MS.gene40314:intron | 50.0% | |
GGAAACAATCACCACCACAG+TGG | - | chr3.2:87754843-87754862 | MS.gene40314:intron | 50.0% | |
GGAGGCAATTGGAATGACAC+TGG | - | chr3.2:87756470-87756489 | MS.gene40314:CDS | 50.0% | |
GGCTTATCCTGACCAAGTTC+AGG | - | chr3.2:87758270-87758289 | MS.gene40314:CDS | 50.0% | |
GTACTCCACACCAAAGCTTC+CGG | - | chr3.2:87754955-87754974 | MS.gene40314:intron | 50.0% | |
GTTCTTGCATAGGTAGCCAC+TGG | + | chr3.2:87759994-87760013 | None:intergenic | 50.0% | |
TACTGTGAGTGCTATGCAGC+TGG | - | chr3.2:87756381-87756400 | MS.gene40314:CDS | 50.0% | |
TAGGTCGAACAACATGACCG+GGG | + | chr3.2:87755278-87755297 | None:intergenic | 50.0% | |
TCGGAAATTTGCGCGGCAAT+TGG | - | chr3.2:87754664-87754683 | MS.gene40314:CDS | 50.0% | |
TCTTTCGTTGAGGTTGCCTG+CGG | - | chr3.2:87760035-87760054 | MS.gene40314:CDS | 50.0% | |
! | CACCGGACACACTTTTCGTA+TGG | - | chr3.2:87755472-87755491 | MS.gene40314:intron | 50.0% |
! | CACTGCTGTTTATGCAGAGC+AGG | - | chr3.2:87758244-87758263 | MS.gene40314:CDS | 50.0% |
! | GGAAGCTTTGGTGTGGAGTA+CGG | + | chr3.2:87754956-87754975 | None:intergenic | 50.0% |
!! | CCGTGAGCTTAGCTTTGGTA+AGG | - | chr3.2:87755155-87755174 | MS.gene40314:intron | 50.0% |
!! | GGCATTTTGACGGTTGAGCT+AGG | - | chr3.2:87755306-87755325 | MS.gene40314:intron | 50.0% |
AAATGCATTTGCGCCGGAGG+AGG | + | chr3.2:87754794-87754813 | None:intergenic | 55.0% | |
AGCCACTGGGATGGAGCAAT+TGG | + | chr3.2:87759980-87759999 | None:intergenic | 55.0% | |
ATCGAAACTAACTGCGGGCG+CGG | + | chr3.2:87754920-87754939 | None:intergenic | 55.0% | |
CACCAAAGCTTCCGGTGAAG+AGG | - | chr3.2:87754963-87754982 | MS.gene40314:intron | 55.0% | |
CAGGAACCACCAGCCATTCT+GGG | + | chr3.2:87759612-87759631 | None:intergenic | 55.0% | |
GAACAATGAGGCTGCCCGAA+AGG | - | chr3.2:87756449-87756468 | MS.gene40314:CDS | 55.0% | |
GGCGACAATGTCAGGTACGA+CGG | + | chr3.2:87754713-87754732 | None:intergenic | 55.0% | |
GGGCGCGGTGATTGAAAATG+CGG | + | chr3.2:87754905-87754924 | None:intergenic | 55.0% | |
GGTGTTCGAGGTTCGACACT+CGG | + | chr3.2:87755204-87755223 | None:intergenic | 55.0% | |
TCACGGGGCCACTTGTGTAT+GGG | + | chr3.2:87755141-87755160 | None:intergenic | 55.0% | |
TCAGGAACCACCAGCCATTC+TGG | + | chr3.2:87759613-87759632 | None:intergenic | 55.0% | |
TCCAAATGCATTTGCGCCGG+AGG | + | chr3.2:87754797-87754816 | None:intergenic | 55.0% | |
TCCTCCGGCGCAAATGCATT+TGG | - | chr3.2:87754793-87754812 | MS.gene40314:CDS | 55.0% | |
TGAAAATGCGGCATCACCGG+CGG | + | chr3.2:87754893-87754912 | None:intergenic | 55.0% | |
TGCATAGGTAGCCACTGGGA+TGG | + | chr3.2:87759989-87760008 | None:intergenic | 55.0% | |
TGCCAATTGCTCCATCCCAG+TGG | - | chr3.2:87759975-87759994 | MS.gene40314:CDS | 55.0% | |
! | CTTCACCGGAAGCTTTGGTG+TGG | + | chr3.2:87754963-87754982 | None:intergenic | 55.0% |
! | TGAGGCTGTGATCTAGGGCT+AGG | + | chr3.2:87756180-87756199 | None:intergenic | 55.0% |
!! | AGGTGTTGGTGTTCGAACCC+CGG | - | chr3.2:87755258-87755277 | MS.gene40314:intron | 55.0% |
ACCGTCGGATTTGCCTCCTC+CGG | - | chr3.2:87754778-87754797 | MS.gene40314:CDS | 60.0% | |
CAATGAGGCTGCCCGAAAGG+AGG | - | chr3.2:87756452-87756471 | MS.gene40314:CDS | 60.0% | |
CAGAGCAGAGGACGTTGGCA+TGG | + | chr3.2:87756798-87756817 | None:intergenic | 60.0% | |
CTCACGGGGCCACTTGTGTA+TGG | + | chr3.2:87755142-87755161 | None:intergenic | 60.0% | |
GACGGTTGAGCTAGGACCTG+TGG | - | chr3.2:87755314-87755333 | MS.gene40314:intron | 60.0% | |
GAGAACGTCACAGTCTCCGC+CGG | - | chr3.2:87754874-87754893 | MS.gene40314:intron | 60.0% | |
GCTGCCCGAAAGGAGGCAAT+TGG | - | chr3.2:87756459-87756478 | MS.gene40314:CDS | 60.0% | |
GGACTTGGACCCTCCATCTC+TGG | - | chr3.2:87756943-87756962 | MS.gene40314:intron | 60.0% | |
GGAGAAGAGCGAAACGACGC+TGG | - | chr3.2:87754631-87754650 | MS.gene40314:CDS | 60.0% | |
GGAGGCAAATCCGACGGTGT+CGG | + | chr3.2:87754776-87754795 | None:intergenic | 60.0% | |
GTACGACGGACCTCCACATG+CGG | + | chr3.2:87754699-87754718 | None:intergenic | 60.0% | |
GTTCTCTGCTGCTGCCACTG+TGG | + | chr3.2:87754860-87754879 | None:intergenic | 60.0% | |
TCTACGACCTCCGACACCGT+CGG | - | chr3.2:87754763-87754782 | MS.gene40314:CDS | 60.0% | |
TGGCCCCGTGAGCTTAGCTT+TGG | - | chr3.2:87755150-87755169 | MS.gene40314:intron | 60.0% | |
TGTGACAGTGACTGCGGCGT+CGG | + | chr3.2:87754737-87754756 | None:intergenic | 60.0% | |
TGTTTCCACGGCCGTCTCAC+TGG | + | chr3.2:87754830-87754849 | None:intergenic | 60.0% | |
TTGGATTTCGCCGCCGCATG+TGG | - | chr3.2:87754683-87754702 | MS.gene40314:CDS | 60.0% | |
! | CGGTGTCGGAGGTCGTAGAA+TGG | + | chr3.2:87754762-87754781 | None:intergenic | 60.0% |
AGTCACCAGTGAGACGGCCG+TGG | - | chr3.2:87754822-87754841 | MS.gene40314:intron | 65.0% | |
CTCTGCTGCTGCCACTGTGG+TGG | + | chr3.2:87754857-87754876 | None:intergenic | 65.0% | |
GATTTCGCCGCCGCATGTGG+AGG | - | chr3.2:87754686-87754705 | MS.gene40314:CDS | 65.0% | |
GCCGGAGGAGGCAAATCCGA+CGG | + | chr3.2:87754782-87754801 | None:intergenic | 65.0% | |
! | GCGTCGGTGGCGACAATGTC+AGG | + | chr3.2:87754721-87754740 | None:intergenic | 65.0% |
! | GGCAAATCCGACGGTGTCGG+AGG | + | chr3.2:87754773-87754792 | None:intergenic | 65.0% |
CGACGGACCTCCACATGCGG+CGG | + | chr3.2:87754696-87754715 | None:intergenic | 70.0% | |
! | GACAGTGACTGCGGCGTCGG+TGG | + | chr3.2:87754734-87754753 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 87754629 | 87760062 | 87754629 | ID=MS.gene40314 |
chr3.2 | mRNA | 87754629 | 87760062 | 87754629 | ID=MS.gene40314.t1;Parent=MS.gene40314 |
chr3.2 | exon | 87759695 | 87760062 | 87759695 | ID=MS.gene40314.t1.exon1;Parent=MS.gene40314.t1 |
chr3.2 | CDS | 87759695 | 87760062 | 87759695 | ID=cds.MS.gene40314.t1;Parent=MS.gene40314.t1 |
chr3.2 | exon | 87758414 | 87758524 | 87758414 | ID=MS.gene40314.t1.exon2;Parent=MS.gene40314.t1 |
chr3.2 | CDS | 87758414 | 87758524 | 87758414 | ID=cds.MS.gene40314.t1;Parent=MS.gene40314.t1 |
chr3.2 | exon | 87758134 | 87758311 | 87758134 | ID=MS.gene40314.t1.exon3;Parent=MS.gene40314.t1 |
chr3.2 | CDS | 87758134 | 87758311 | 87758134 | ID=cds.MS.gene40314.t1;Parent=MS.gene40314.t1 |
chr3.2 | exon | 87757629 | 87757985 | 87757629 | ID=MS.gene40314.t1.exon4;Parent=MS.gene40314.t1 |
chr3.2 | CDS | 87757629 | 87757985 | 87757629 | ID=cds.MS.gene40314.t1;Parent=MS.gene40314.t1 |
chr3.2 | exon | 87757220 | 87757311 | 87757220 | ID=MS.gene40314.t1.exon5;Parent=MS.gene40314.t1 |
chr3.2 | CDS | 87757220 | 87757311 | 87757220 | ID=cds.MS.gene40314.t1;Parent=MS.gene40314.t1 |
chr3.2 | exon | 87757027 | 87757121 | 87757027 | ID=MS.gene40314.t1.exon6;Parent=MS.gene40314.t1 |
chr3.2 | CDS | 87757027 | 87757121 | 87757027 | ID=cds.MS.gene40314.t1;Parent=MS.gene40314.t1 |
chr3.2 | exon | 87756359 | 87756751 | 87756359 | ID=MS.gene40314.t1.exon7;Parent=MS.gene40314.t1 |
chr3.2 | CDS | 87756359 | 87756751 | 87756359 | ID=cds.MS.gene40314.t1;Parent=MS.gene40314.t1 |
chr3.2 | exon | 87754629 | 87754825 | 87754629 | ID=MS.gene40314.t1.exon8;Parent=MS.gene40314.t1 |
chr3.2 | CDS | 87754629 | 87754825 | 87754629 | ID=cds.MS.gene40314.t1;Parent=MS.gene40314.t1 |
Gene Sequence |
Protein sequence |