AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40378

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40378.t1 MTR_3g108960 80.625 320 13 3 4 323 131 401 9.55e-172 483
MS.gene40378.t1 MTR_1g009613 61.635 159 51 5 151 304 178 331 2.65e-57 188
MS.gene40378.t1 MTR_4g127040 62.143 140 43 4 153 291 174 304 4.50e-52 174
MS.gene40378.t1 MTR_0117s0040 92.593 81 5 1 211 291 53 132 5.65e-48 161
MS.gene40378.t1 MTR_4g094908 58.871 124 49 1 168 289 200 323 1.28e-42 150
MS.gene40378.t1 MTR_5g016610 59.483 116 46 1 175 289 141 256 5.88e-40 141
MS.gene40378.t1 MTR_1g070455 62.500 80 30 0 210 289 271 350 6.91e-32 122
MS.gene40378.t1 MTR_2g016770 52.439 82 38 1 209 289 11 92 2.84e-24 98.6
MS.gene40378.t1 MTR_2g032030 48.454 97 45 2 198 289 228 324 2.89e-24 102
MS.gene40378.t1 MTR_2g032030 48.454 97 45 2 198 289 228 324 3.10e-24 102
MS.gene40378.t1 MTR_2g016770 51.852 81 38 1 210 289 4 84 1.92e-23 96.3
MS.gene40378.t1 MTR_2g083870 49.462 93 31 2 208 289 50 137 3.08e-23 97.1
MS.gene40378.t1 MTR_7g079040 43.396 106 49 3 184 289 117 211 1.70e-22 96.3
MS.gene40378.t1 MTR_2g024350 56.250 64 28 0 226 289 2 65 1.26e-21 91.7
MS.gene40378.t1 MTR_8g087000 40.952 105 55 2 192 289 29 133 2.06e-21 91.7
MS.gene40378.t1 MTR_2g024380 48.750 80 40 1 210 289 230 308 4.04e-21 94.0
MS.gene40378.t1 MTR_8g087000 57.627 59 25 0 231 289 76 134 7.90e-21 90.1
MS.gene40378.t1 MTR_8g028565 50.000 80 39 1 210 289 134 212 1.77e-20 90.9
MS.gene40378.t1 MTR_7g109600 43.023 86 40 1 213 289 25 110 3.17e-20 89.0
MS.gene40378.t1 MTR_8g098945 59.322 59 24 0 233 291 130 188 2.79e-18 83.6
MS.gene40378.t1 MTR_5g043880 44.706 85 46 1 208 292 100 183 3.70e-18 83.2
MS.gene40378.t1 MTR_1g099600 43.373 83 46 1 208 289 160 242 1.29e-17 82.4
MS.gene40378.t1 MTR_7g062220 37.615 109 53 3 211 308 106 210 1.84e-17 82.0
MS.gene40378.t1 MTR_1g086790 40.217 92 54 1 198 289 124 214 2.06e-17 82.0
MS.gene40378.t1 MTR_8g092140 51.613 62 29 1 228 289 156 216 2.76e-17 80.1
MS.gene40378.t1 MTR_2g023930 48.649 74 38 0 216 289 289 362 2.96e-17 82.8
MS.gene40378.t1 MTR_7g109800 38.614 101 60 2 189 289 103 201 5.17e-17 80.5
MS.gene40378.t1 MTR_3g095080 51.613 62 29 1 228 289 164 224 7.43e-17 79.0
MS.gene40378.t1 MTR_5g091390 47.222 72 37 1 219 290 144 214 7.52e-17 80.1
MS.gene40378.t1 MTR_3g095080 51.613 62 29 1 228 289 140 200 7.56e-17 78.6
MS.gene40378.t1 MTR_8g007270 44.706 85 43 3 208 289 127 210 9.00e-17 78.6
MS.gene40378.t1 MTR_3g053330 45.946 74 40 0 216 289 235 308 1.02e-16 80.9
MS.gene40378.t1 MTR_4g132430 47.297 74 39 0 216 289 111 184 1.22e-16 80.1
MS.gene40378.t1 MTR_2g088000 47.297 74 39 0 216 289 333 406 1.24e-16 80.9
MS.gene40378.t1 MTR_4g132430 47.297 74 39 0 216 289 245 318 1.98e-16 80.1
MS.gene40378.t1 MTR_5g094430 47.297 74 38 1 216 289 348 420 2.46e-16 80.1
MS.gene40378.t1 MTR_4g094588 45.070 71 38 1 219 289 165 234 2.56e-16 79.0
MS.gene40378.t1 MTR_5g094430 47.297 74 38 1 216 289 214 286 2.72e-16 79.3
MS.gene40378.t1 MTR_5g094430 47.297 74 38 1 216 289 236 308 2.75e-16 79.3
MS.gene40378.t1 MTR_1g013760 52.632 57 27 0 233 289 141 197 2.77e-16 78.2
MS.gene40378.t1 MTR_3g056100 43.678 87 42 2 216 296 386 471 3.09e-16 79.7
MS.gene40378.t1 MTR_3g056100 43.678 87 42 2 216 296 399 484 3.13e-16 79.7
MS.gene40378.t1 MTR_5g074400 48.052 77 39 1 213 289 401 476 3.29e-16 79.7
MS.gene40378.t1 MTR_7g110720 45.946 74 40 0 216 289 200 273 3.78e-16 79.0
MS.gene40378.t1 MTR_7g110720 45.946 74 40 0 216 289 173 246 4.21e-16 79.0
MS.gene40378.t1 MTR_3g056100 43.678 87 42 2 216 296 242 327 4.81e-16 79.0
MS.gene40378.t1 MTR_8g067635 39.423 104 55 2 209 312 329 424 4.90e-16 79.0
MS.gene40378.t1 MTR_3g056100 43.678 87 42 2 216 296 255 340 4.96e-16 79.0
MS.gene40378.t1 MTR_3g031220 47.436 78 40 1 212 289 345 421 5.53e-16 79.0
MS.gene40378.t1 MTR_8g069935 43.210 81 46 0 209 289 308 388 7.78e-16 78.2
MS.gene40378.t1 MTR_7g100510 52.239 67 31 1 224 290 353 418 9.23e-16 77.8
MS.gene40378.t1 MTR_7g100510 44.186 86 41 4 224 308 180 259 9.34e-13 68.9
MS.gene40378.t1 MTR_4g107970 38.739 111 50 3 181 289 141 235 1.11e-15 78.2
MS.gene40378.t1 MTR_4g007060 41.379 87 44 2 223 306 116 198 1.25e-15 76.3
MS.gene40378.t1 MTR_2g033820 45.333 75 40 1 215 289 186 259 1.46e-15 77.0
MS.gene40378.t1 MTR_4g007060 45.455 77 38 1 230 306 160 232 1.63e-15 76.3
MS.gene40378.t1 MTR_7g080000 38.596 114 55 4 190 289 376 488 1.67e-15 77.8
MS.gene40378.t1 MTR_7g080000 49.123 57 27 2 233 289 235 289 6.27e-11 63.9
MS.gene40378.t1 MTR_2g105060 36.047 86 43 1 216 289 66 151 1.85e-15 75.1
MS.gene40378.t1 MTR_3g106060 39.024 82 48 1 233 314 139 218 1.86e-15 75.9
MS.gene40378.t1 MTR_4g107970 38.739 111 50 3 181 289 218 312 1.90e-15 77.4
MS.gene40378.t1 MTR_2g105060 36.047 86 43 1 216 289 141 226 2.09e-15 75.9
MS.gene40378.t1 MTR_7g009730 48.101 79 33 2 213 289 204 276 2.33e-15 77.0
MS.gene40378.t1 MTR_1g015140 43.662 71 39 1 219 289 89 158 2.71e-15 72.8
MS.gene40378.t1 MTR_3g009470 39.604 101 55 2 194 289 452 551 3.05e-15 77.0
MS.gene40378.t1 MTR_3g009470 47.368 57 28 2 233 289 281 335 3.52e-11 64.7
MS.gene40378.t1 MTR_7g011820 53.226 62 28 1 228 289 406 466 3.20e-15 76.6
MS.gene40378.t1 MTR_7g011820 45.679 81 41 3 224 303 219 297 8.56e-14 72.4
MS.gene40378.t1 MTR_5g067680 52.381 63 28 1 231 291 201 263 5.37e-15 75.1
MS.gene40378.t1 MTR_8g099350 40.816 98 46 3 208 294 100 196 6.22e-15 75.1
MS.gene40378.t1 MTR_1g013790 51.667 60 29 0 230 289 99 158 6.30e-15 73.9
MS.gene40378.t1 MTR_7g080020 34.028 144 69 5 180 303 421 558 6.56e-15 75.9
MS.gene40378.t1 MTR_7g080020 45.902 61 31 2 233 293 281 339 7.04e-11 63.5
MS.gene40378.t1 MTR_4g094412 46.667 75 36 1 215 289 221 291 8.03e-15 75.1
MS.gene40378.t1 MTR_4g094412 46.667 75 36 1 215 289 230 300 9.13e-15 75.1
MS.gene40378.t1 MTR_4g122530 44.595 74 40 1 216 289 192 264 1.04e-14 74.7
MS.gene40378.t1 MTR_4g130900 55.000 60 26 1 230 289 357 415 1.06e-14 75.1
MS.gene40378.t1 MTR_8g067650 45.455 88 43 2 203 289 313 396 1.72e-14 74.3
MS.gene40378.t1 MTR_5g042920 50.000 62 30 1 228 289 316 376 1.77e-14 73.9
MS.gene40378.t1 MTR_5g042920 47.761 67 32 3 224 289 142 206 1.45e-11 65.5
MS.gene40378.t1 MTR_4g013260 42.857 77 43 1 213 289 317 392 2.40e-14 73.9
MS.gene40378.t1 MTR_6g086555 29.577 213 118 10 94 289 66 263 2.49e-14 73.6
MS.gene40378.t1 MTR_2g045360 41.333 75 44 0 216 290 195 269 3.59e-14 73.2
MS.gene40378.t1 MTR_3g104750 41.892 74 42 1 216 289 88 160 3.78e-14 69.7
MS.gene40378.t1 MTR_1g078260 41.584 101 46 4 201 289 205 304 8.16e-14 72.4
MS.gene40378.t1 MTR_4g082580 48.387 62 31 1 228 289 274 334 9.73e-14 71.6
MS.gene40378.t1 MTR_1g077780 37.624 101 59 2 213 310 43 142 2.19e-13 67.0
MS.gene40378.t1 MTR_7g079010 40.000 80 44 2 213 289 119 197 2.33e-13 68.6
MS.gene40378.t1 MTR_6g053200 37.778 90 50 2 207 291 301 389 2.54e-13 70.9
MS.gene40378.t1 MTR_7g117200 42.553 94 46 5 208 296 92 182 3.59e-13 69.7
MS.gene40378.t1 MTR_3g090860 52.632 57 25 1 233 287 134 190 1.00e-12 68.6
MS.gene40378.t1 MTR_7g071120 32.143 140 83 3 150 289 253 380 1.28e-12 68.6
MS.gene40378.t1 MTR_7g028415 45.161 62 33 1 228 289 89 149 2.77e-12 64.7
MS.gene40378.t1 MTR_7g028710 45.161 62 33 1 228 289 89 149 2.77e-12 64.7
MS.gene40378.t1 MTR_8g092010 44.262 61 33 1 229 289 105 164 7.17e-12 63.5
MS.gene40378.t1 MTR_3g095040 41.935 62 35 1 229 290 115 175 7.58e-12 63.9
MS.gene40378.t1 MTR_4g049760 47.170 53 28 0 237 289 295 347 8.45e-12 66.2
MS.gene40378.t1 MTR_5g097490 48.333 60 30 1 230 289 250 308 8.68e-12 65.9
MS.gene40378.t1 MTR_4g049790 40.580 69 40 1 222 289 301 369 3.20e-11 64.7
MS.gene40378.t1 MTR_3g009470 47.368 57 28 2 233 289 281 335 3.44e-11 64.3
MS.gene40378.t1 MTR_3g031220 39.535 86 46 3 204 289 174 253 6.09e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40378.t1 AT4G31550 63.690 168 52 4 144 306 152 315 7.23e-64 205
MS.gene40378.t1 AT4G31550 63.314 169 52 5 144 306 152 316 3.58e-62 201
MS.gene40378.t1 AT2G24570 58.084 167 57 6 150 308 154 315 1.14e-53 179
MS.gene40378.t1 AT4G24240 48.235 170 71 5 139 303 195 352 3.48e-43 152
MS.gene40378.t1 AT4G31550 64.912 114 35 3 144 252 152 265 1.91e-38 137
MS.gene40378.t1 AT2G30590 58.879 107 41 2 193 296 271 377 1.58e-37 138
MS.gene40378.t1 AT2G23320 54.867 113 46 3 181 289 186 297 3.74e-37 135
MS.gene40378.t1 AT5G28650 44.828 174 80 6 120 292 164 322 1.37e-36 134
MS.gene40378.t1 AT3G04670 45.238 168 74 5 126 292 172 322 1.57e-36 134
MS.gene40378.t1 AT4G24240 50.420 119 42 5 139 252 195 301 1.02e-24 102
MS.gene40378.t1 AT3G58710 49.462 93 31 2 208 289 40 127 2.13e-23 97.8
MS.gene40378.t1 AT2G34830 50.575 87 38 2 208 289 186 272 2.52e-23 100
MS.gene40378.t1 AT2G34830 50.575 87 38 2 208 289 195 281 2.92e-23 99.8
MS.gene40378.t1 AT1G29280 61.017 59 23 0 231 289 73 131 3.33e-23 97.1
MS.gene40378.t1 AT4G01250 44.898 98 49 1 192 289 93 185 6.43e-23 97.1
MS.gene40378.t1 AT1G30650 46.392 97 47 2 198 289 178 274 7.52e-23 98.6
MS.gene40378.t1 AT3G58710 48.387 93 32 2 208 289 41 128 1.25e-22 95.5
MS.gene40378.t1 AT5G52830 51.220 82 36 2 208 289 145 222 3.47e-21 92.8
MS.gene40378.t1 AT5G45050 49.383 81 40 1 209 289 1130 1209 6.84e-21 94.0
MS.gene40378.t1 AT5G45050 49.383 81 40 1 209 289 1158 1237 7.06e-21 94.0
MS.gene40378.t1 AT5G45050 49.383 81 40 1 209 289 1019 1098 8.16e-21 94.0
MS.gene40378.t1 AT3G04670 43.750 128 54 5 130 256 176 286 5.96e-20 88.6
MS.gene40378.t1 AT1G29860 37.607 117 70 2 175 289 77 192 8.52e-19 85.1
MS.gene40378.t1 AT2G23320 53.947 76 30 3 181 252 186 260 8.80e-19 84.7
MS.gene40378.t1 AT4G39410 46.988 83 40 2 210 289 198 279 1.97e-18 84.7
MS.gene40378.t1 AT4G18170 38.095 105 59 2 185 289 130 228 5.19e-18 83.6
MS.gene40378.t1 AT1G69310 45.349 86 45 2 208 292 122 206 6.90e-18 82.8
MS.gene40378.t1 AT1G69310 45.349 86 45 2 208 292 122 206 6.90e-18 82.8
MS.gene40378.t1 AT1G69310 45.349 86 45 2 208 292 122 206 6.90e-18 82.8
MS.gene40378.t1 AT2G47260 40.217 92 54 1 198 289 140 230 7.33e-18 83.6
MS.gene40378.t1 AT4G04450 42.553 94 54 0 196 289 162 255 2.12e-17 82.8
MS.gene40378.t1 AT5G07100 37.143 105 64 2 187 290 188 291 2.41e-17 81.6
MS.gene40378.t1 AT4G23550 44.304 79 40 1 212 290 124 198 2.44e-17 81.6
MS.gene40378.t1 AT5G26170 41.333 75 43 1 219 293 100 173 2.87e-17 78.6
MS.gene40378.t1 AT4G04450 42.553 94 54 0 196 289 256 349 5.02e-17 82.0
MS.gene40378.t1 AT5G07100 37.143 105 64 2 187 290 95 198 6.47e-17 78.6
MS.gene40378.t1 AT5G07100 37.143 105 64 2 187 290 95 198 6.47e-17 78.6
MS.gene40378.t1 AT5G07100 37.143 105 64 2 187 290 95 198 6.47e-17 78.6
MS.gene40378.t1 AT5G07100 37.143 105 64 2 187 290 95 198 6.47e-17 78.6
MS.gene40378.t1 AT2G44745 44.048 84 43 3 209 289 119 201 7.72e-17 78.6
MS.gene40378.t1 AT1G62300 47.297 74 39 0 216 289 296 369 1.19e-16 80.9
MS.gene40378.t1 AT4G31800 37.615 109 64 2 218 324 97 203 1.46e-16 78.2
MS.gene40378.t1 AT5G46350 46.479 71 37 1 219 289 170 239 1.65e-16 79.3
MS.gene40378.t1 AT5G49520 45.946 74 39 1 216 289 205 277 1.92e-16 79.7
MS.gene40378.t1 AT2G37260 53.846 65 29 1 228 292 263 326 2.21e-16 79.3
MS.gene40378.t1 AT2G37260 53.846 65 29 1 228 292 265 328 2.31e-16 79.3
MS.gene40378.t1 AT4G22070 47.297 74 39 0 216 289 281 354 2.50e-16 80.1
MS.gene40378.t1 AT4G22070 47.297 74 39 0 216 289 281 354 2.50e-16 80.1
MS.gene40378.t1 AT4G22070 47.297 74 39 0 216 289 281 354 2.50e-16 80.1
MS.gene40378.t1 AT4G22070 47.297 74 39 0 216 289 281 354 2.50e-16 80.1
MS.gene40378.t1 AT2G37260 53.846 65 29 1 228 292 345 408 2.71e-16 79.7
MS.gene40378.t1 AT4G31800 37.615 109 64 2 218 324 162 268 4.32e-16 77.8
MS.gene40378.t1 AT5G15130 43.434 99 42 4 193 289 156 242 5.57e-16 79.0
MS.gene40378.t1 AT5G15130 43.434 99 42 4 193 289 198 284 6.69e-16 78.6
MS.gene40378.t1 AT4G26640 47.297 74 38 1 216 289 189 261 1.06e-15 77.4
MS.gene40378.t1 AT4G26640 47.297 74 38 1 216 289 189 261 1.06e-15 77.4
MS.gene40378.t1 AT4G26640 47.297 74 38 1 216 289 189 261 1.06e-15 77.4
MS.gene40378.t1 AT4G26640 47.297 74 38 1 216 289 189 261 1.06e-15 77.4
MS.gene40378.t1 AT4G26640 47.297 74 38 1 216 289 325 397 1.09e-15 78.2
MS.gene40378.t1 AT4G26640 47.297 74 38 1 216 289 365 437 1.20e-15 78.2
MS.gene40378.t1 AT4G26640 47.297 74 38 1 216 289 293 365 1.22e-15 77.8
MS.gene40378.t1 AT2G04880 43.590 78 43 1 212 289 263 339 2.39e-15 77.0
MS.gene40378.t1 AT2G04880 43.590 78 43 1 212 289 287 363 2.61e-15 77.0
MS.gene40378.t1 AT4G01720 47.297 74 39 0 216 289 223 296 3.12e-15 76.6
MS.gene40378.t1 AT2G38470 45.946 74 39 1 216 289 346 418 3.53e-15 76.6
MS.gene40378.t1 AT1G64000 49.180 61 30 1 229 289 111 170 3.83e-15 73.2
MS.gene40378.t1 AT1G66550 38.281 128 66 4 162 287 44 160 3.87e-15 74.3
MS.gene40378.t1 AT2G40740 44.048 84 43 3 208 287 147 230 4.33e-15 74.7
MS.gene40378.t1 AT3G01080 51.613 62 29 1 228 289 340 400 4.41e-15 76.3
MS.gene40378.t1 AT3G01080 43.529 85 45 3 229 312 201 283 9.39e-14 72.0
MS.gene40378.t1 AT2G03340 46.479 71 37 1 219 289 402 471 4.57e-15 76.3
MS.gene40378.t1 AT2G03340 46.032 63 31 3 228 289 245 305 5.26e-11 63.9
MS.gene40378.t1 AT2G40740 44.048 84 43 3 208 287 156 239 6.22e-15 74.7
MS.gene40378.t1 AT5G41570 41.250 80 46 1 210 289 76 154 6.69e-15 72.0
MS.gene40378.t1 AT3G01080 51.613 62 29 1 228 289 302 362 7.37e-15 75.1
MS.gene40378.t1 AT3G01080 43.529 85 45 3 229 312 163 245 1.68e-13 71.2
MS.gene40378.t1 AT1G13960 46.479 71 37 1 219 289 396 465 9.91e-15 75.1
MS.gene40378.t1 AT1G13960 42.647 68 36 3 228 294 224 289 8.00e-11 63.2
MS.gene40378.t1 AT5G56270 45.455 77 41 1 213 289 468 543 1.48e-14 74.7
MS.gene40378.t1 AT1G13960 46.479 71 37 1 219 289 243 312 2.29e-14 73.6
MS.gene40378.t1 AT4G26440 35.772 123 69 3 191 309 327 443 2.78e-14 73.9
MS.gene40378.t1 AT4G26440 46.667 60 29 3 231 289 176 233 6.46e-11 63.5
MS.gene40378.t1 AT3G01080 43.529 85 45 3 229 312 201 283 2.78e-14 72.8
MS.gene40378.t1 AT3G62340 42.500 80 45 1 210 289 96 174 3.32e-14 72.0
MS.gene40378.t1 AT1G68150 45.333 75 37 1 215 289 222 292 3.38e-14 73.2
MS.gene40378.t1 AT1G18860 54.717 53 24 0 237 289 244 296 3.49e-14 73.6
MS.gene40378.t1 AT2G25000 47.368 57 30 0 233 289 104 160 4.37e-14 70.9
MS.gene40378.t1 AT2G25000 47.368 57 30 0 233 289 104 160 4.37e-14 70.9
MS.gene40378.t1 AT4G30935 51.667 60 28 1 230 289 329 387 5.67e-14 72.8
MS.gene40378.t1 AT2G25000 47.368 57 30 0 233 289 126 182 8.54e-14 70.5
MS.gene40378.t1 AT2G25000 47.368 57 30 0 233 289 147 203 1.37e-13 70.1
MS.gene40378.t1 AT5G45260 30.000 170 111 5 146 307 1116 1285 2.27e-13 71.6
MS.gene40378.t1 AT1G66550 38.043 92 47 2 206 287 74 165 3.85e-13 68.6
MS.gene40378.t1 AT1G69310 41.860 86 44 3 208 292 122 202 4.13e-13 68.9
MS.gene40378.t1 AT5G64810 39.474 76 45 1 219 294 97 171 5.17e-13 67.4
MS.gene40378.t1 AT1G80840 41.667 60 35 0 230 289 144 203 5.81e-13 68.9
MS.gene40378.t1 AT1G66560 50.847 59 27 1 231 287 102 160 2.08e-12 66.6
MS.gene40378.t1 AT5G43290 50.000 58 28 1 233 290 115 171 2.97e-12 66.2
MS.gene40378.t1 AT2G46130 45.161 62 33 1 228 289 26 86 4.73e-12 62.4
MS.gene40378.t1 AT1G55600 38.961 77 46 1 213 289 288 363 5.23e-12 67.0
MS.gene40378.t1 AT5G13080 45.161 62 33 1 228 289 63 123 5.62e-12 63.2
MS.gene40378.t1 AT1G80590 44.304 79 37 2 233 309 86 159 6.18e-12 65.1
MS.gene40378.t1 AT1G69810 39.474 76 40 2 237 311 208 278 6.39e-12 66.2
MS.gene40378.t1 AT1G69810 39.474 76 40 2 237 311 150 220 6.52e-12 65.9
MS.gene40378.t1 AT2G21900 45.614 57 30 1 233 289 110 165 6.61e-12 64.3
MS.gene40378.t1 AT3G01970 43.548 62 34 1 228 289 61 121 1.42e-11 62.0
MS.gene40378.t1 AT2G46400 37.500 96 53 3 192 283 65 157 1.78e-11 64.3
MS.gene40378.t1 AT2G30250 41.096 73 40 2 217 289 315 384 3.57e-11 63.9
MS.gene40378.t1 AT4G11070 40.964 83 46 2 208 287 84 166 8.21e-11 62.4
MS.gene40378.t1 AT5G22570 51.786 56 25 1 230 283 108 163 8.73e-11 62.4

Find 0 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTCATTTTTTTTTATTTA+AGG + 24210:34581-34600 MS.gene40378:intron 10.0%
!!! GTTTTGATTTTATTTTTTTT+AGG + 24210:36575-36594 MS.gene40378:intron 10.0%
!!! TTATTTTTTTTAGGAAAAAT+CGG + 24210:36584-36603 MS.gene40378:intron 10.0%
!! ATTTATTTGAATATGGTAAA+AGG + 24210:36751-36770 MS.gene40378:intron 15.0%
!! GAATCAAAATTAATTGATAT+AGG + 24210:34003-34022 MS.gene40378:intron 15.0%
!! GATAGCTAAATATATATTAT+TGG - 24210:34369-34388 MS.gene40378:intergenic 15.0%
!! TAAATGACAAATAAAATATG+CGG - 24210:36489-36508 MS.gene40378:intergenic 15.0%
!! TATTAACTCTATAATAACAA+TGG - 24210:33969-33988 MS.gene40378:intergenic 15.0%
!!! CAGTATTTTTAAAGAAAAAT+CGG - 24210:34192-34211 MS.gene40378:intergenic 15.0%
!!! TAAATTAATTTTACCTTTTC+TGG - 24210:36331-36350 MS.gene40378:intergenic 15.0%
!!! TATTTTTAATATCAGTAATC+AGG + 24210:34398-34417 MS.gene40378:intron 15.0%
!! AAATGACAAATAAAATATGC+GGG - 24210:36488-36507 MS.gene40378:intergenic 20.0%
!! AATGAATTACTCATAATTTG+AGG + 24210:34277-34296 MS.gene40378:intron 20.0%
!! ACCATATTCAAATAAATCAA+CGG - 24210:36748-36767 MS.gene40378:intergenic 20.0%
!! ATTAAAAACAAGTAAGTTTG+TGG + 24210:34646-34665 MS.gene40378:intron 20.0%
!! GGAATTAAAATAATTGATAC+AGG + 24210:34667-34686 MS.gene40378:intron 20.0%
!! TATTACCTCTATAATAACAA+TGG - 24210:34627-34646 MS.gene40378:intergenic 20.0%
!! TTCTTATAAACAAGACTAAA+AGG + 24210:34089-34108 MS.gene40378:intron 20.0%
!!! AAGTCATTTTCTACTAAAAA+TGG - 24210:35311-35330 MS.gene40378:intergenic 20.0%
!!! GTTTTGTTTTGTTTATTTCA+GGG + 24210:36800-36819 MS.gene40378:intron 20.0%
!!! TGTTTTGTTTTGTTTATTTC+AGG + 24210:36799-36818 MS.gene40378:intron 20.0%
!!! TTTTATTCTACTTGATCAAA+GGG - 24210:35143-35162 MS.gene40378:intergenic 20.0%
!!! TTTTGTTTTGTTTATTTCAG+GGG + 24210:36801-36820 MS.gene40378:intron 20.0%
! AATGACAAATAAAATATGCG+GGG - 24210:36487-36506 MS.gene40378:intergenic 25.0%
! AGTTAATACAAGTAAGTTTG+TGG + 24210:33981-34000 MS.gene40378:intron 25.0%
! ATACTGTATGAGTTTATGTT+AGG - 24210:35263-35282 MS.gene40378:intergenic 25.0%
! CTTTGATCAAGTAGAATAAA+AGG + 24210:35142-35161 MS.gene40378:intron 25.0%
! GGTAAAAGGAATGTTTAATA+AGG + 24210:36765-36784 MS.gene40378:intron 25.0%
! TACGTTACAACTAGTATATT+TGG - 24210:36894-36913 MS.gene40378:intergenic 25.0%
! TGTTAATAGTCAACATTCAA+TGG + 24210:36362-36381 MS.gene40378:intron 25.0%
! TTAATCTGACGAATTATGAA+CGG - 24210:35114-35133 MS.gene40378:intergenic 25.0%
! TTAGTAAAATCGAGAGTTAA+AGG - 24210:35663-35682 MS.gene40378:intergenic 25.0%
! TTTATTTCAGGGGTTATTAT+AGG + 24210:36811-36830 MS.gene40378:intron 25.0%
! TTTCTACTAAAAATGGACAA+TGG - 24210:35304-35323 MS.gene40378:intergenic 25.0%
! TTTCTAGATCTAAGGATTTA+GGG - 24210:35707-35726 MS.gene40378:intergenic 25.0%
!! ATTTCTAGATCTAAGGATTT+AGG - 24210:35708-35727 MS.gene40378:intergenic 25.0%
!! CTTTTATTCTACTTGATCAA+AGG - 24210:35144-35163 MS.gene40378:intergenic 25.0%
!! GTTTATGTTAGGATTTTGTA+AGG - 24210:35252-35271 MS.gene40378:intergenic 25.0%
!! TACTTGTTCTTTTGACAATA+TGG + 24210:34977-34996 MS.gene40378:intron 25.0%
!! TTTTATATAAAAGTGAGCAG+AGG - 24210:34460-34479 MS.gene40378:intergenic 25.0%
!!! CACTTTTTTTAGACGAAAAA+AGG - 24210:34496-34515 MS.gene40378:intergenic 25.0%
!!! CCTTTTTTATGACTAGAAAA+GGG + 24210:34881-34900 MS.gene40378:intron 25.0%
AAAGATGAGTAAGATGTAAG+AGG - 24210:36125-36144 MS.gene40378:intergenic 30.0%
AGAATTATTCTCTTGCATTG+GGG - 24210:36955-36974 MS.gene40378:intergenic 30.0%
CAGAATTATTCTCTTGCATT+GGG - 24210:36956-36975 MS.gene40378:intergenic 30.0%
GAAAACTAAATGTTTCCTTG+GGG - 24210:35731-35750 MS.gene40378:intergenic 30.0%
GGAAAACTAAATGTTTCCTT+GGG - 24210:35732-35751 MS.gene40378:intergenic 30.0%
TAAAATCGAGAGTTAAAGGT+TGG - 24210:35659-35678 MS.gene40378:intergenic 30.0%
TGGAAAACTAAATGTTTCCT+TGG - 24210:35733-35752 MS.gene40378:intergenic 30.0%
! GGATTTAGGGTTAGATTTAA+AGG - 24210:35694-35713 MS.gene40378:intergenic 30.0%
! GTAAGGAAAATGATGATGAT+GGG - 24210:35235-35254 MS.gene40378:intergenic 30.0%
! TGTAAGGAAAATGATGATGA+TGG - 24210:35236-35255 MS.gene40378:intergenic 30.0%
! TTGTGCCATTGTTATTATAG+AGG + 24210:33961-33980 MS.gene40378:intron 30.0%
!! CCCTTTTCTAGTCATAAAAA+AGG - 24210:34884-34903 MS.gene40378:intergenic 30.0%
!! GAAAATGACTTTGAGATTGA+TGG + 24210:35320-35339 MS.gene40378:intron 30.0%
!! GCCGTTGATTTATTTGAATA+TGG + 24210:36744-36763 MS.gene40378:intron 30.0%
!! TTTTTAGGAAAAATCGGAAC+AGG + 24210:36590-36609 MS.gene40378:intron 30.0%
!!! ATTGATGGATTTTCCAAACA+TGG + 24210:35335-35354 MS.gene40378:intron 30.0%
!!! GCCTTTTTTATGACTAGAAA+AGG + 24210:34880-34899 MS.gene40378:intron 30.0%
AAAATTGTCCAGCTAGGAAA+AGG + 24210:36847-36866 MS.gene40378:CDS 35.0%
AAATCAATCATCAGTCACCT+TGG - 24210:36721-36740 MS.gene40378:intergenic 35.0%
AAATTGTCCAGCTAGGAAAA+GGG + 24210:36848-36867 MS.gene40378:CDS 35.0%
AATGATGAGTTAGGTGAAAG+AGG - 24210:35855-35874 MS.gene40378:intergenic 35.0%
AATGGTGAGATAGAAGAAAG+AGG - 24210:35996-36015 MS.gene40378:intergenic 35.0%
AATTTATATGGAGGAGTGAG+AGG - 24210:35205-35224 MS.gene40378:intergenic 35.0%
AGAGACATTATTAGCGAAGT+TGG - 24210:35418-35437 MS.gene40378:intergenic 35.0%
ATATTAGAAACTGCCACACA+AGG + 24210:35378-35397 MS.gene40378:intron 35.0%
ATGGGTGCGGTTAATTTATA+TGG - 24210:35217-35236 MS.gene40378:intergenic 35.0%
ATTATGAACGGTTCCTGATA+TGG - 24210:35102-35121 MS.gene40378:intergenic 35.0%
CAAATGTGTTTGAACTCAGT+GGG + 24210:34559-34578 MS.gene40378:intron 35.0%
CATGGATGAGGAAAAAGAAA+AGG + 24210:35353-35372 MS.gene40378:intron 35.0%
CCAATGCAAGAGAATAATTC+TGG + 24210:36954-36973 MS.gene40378:CDS 35.0%
CCAGAATTATTCTCTTGCAT+TGG - 24210:36957-36976 MS.gene40378:intergenic 35.0%
CGTTTGTCGTAAAAAAGACA+AGG + 24210:36433-36452 MS.gene40378:intron 35.0%
CTAAAAATGGACAATGGTTG+AGG - 24210:35298-35317 MS.gene40378:intergenic 35.0%
GATGACATGAATGATGAGTT+AGG - 24210:35864-35883 MS.gene40378:intergenic 35.0%
GGAGGAATTTGAATTTGAAG+TGG - 24210:35624-35643 MS.gene40378:intergenic 35.0%
TAGTCAACATTCAATGGTCA+CGG + 24210:36368-36387 MS.gene40378:intron 35.0%
TATTCTACTTGATCAAAGGG+TGG - 24210:35140-35159 MS.gene40378:intergenic 35.0%
TCAAATGTGTTTGAACTCAG+TGG + 24210:34558-34577 MS.gene40378:intron 35.0%
TGTCTAAAAATTGTCCAGCT+AGG + 24210:36841-36860 MS.gene40378:CDS 35.0%
TTATGAACGGTTCCTGATAT+GGG - 24210:35101-35120 MS.gene40378:intergenic 35.0%
! ATTTGAATTTGAAGTGGTGG+TGG - 24210:35618-35637 MS.gene40378:intergenic 35.0%
! GGAATTTGAATTTGAAGTGG+TGG - 24210:35621-35640 MS.gene40378:intergenic 35.0%
! GGGTTAGATTTAAAGGTGTA+AGG - 24210:35687-35706 MS.gene40378:intergenic 35.0%
! GTAAGTTGGATAGTTTCTTG+AGG - 24210:35491-35510 MS.gene40378:intergenic 35.0%
! TCTTTTTCCTCATCCATGTT+TGG - 24210:35351-35370 MS.gene40378:intergenic 35.0%
! TGACAGCTTTTCTTCAATGA+CGG - 24210:36254-36273 MS.gene40378:intergenic 35.0%
!! AATAATTCTGGTTCAGGTTC+AGG + 24210:36966-36985 MS.gene40378:CDS 35.0%
!! AATTTTACCTTTTCTGGCAG+TGG - 24210:36325-36344 MS.gene40378:intergenic 35.0%
!! ATAATTCTGGTTCAGGTTCA+GGG + 24210:36967-36986 MS.gene40378:CDS 35.0%
!! CAAGAGAATAATTCTGGTTC+AGG + 24210:36960-36979 MS.gene40378:CDS 35.0%
!!! AGTTCAGTGTTTTGAAGAGA+GGG - 24210:35447-35466 MS.gene40378:intergenic 35.0%
AAAAGCTGTCACAATCACTC+CGG + 24210:36263-36282 MS.gene40378:CDS 40.0%
AAGAAAGAGGCTGTTTACCA+CGG - 24210:35983-36002 MS.gene40378:intergenic 40.0%
ATACTGCCTTTCTCATGACT+TGG + 24210:34206-34225 MS.gene40378:intron 40.0%
ATGGACAATGGTTGAGGTTA+AGG - 24210:35292-35311 MS.gene40378:intergenic 40.0%
ATGTAAGAGGCTGTTTACCA+CGG - 24210:36112-36131 MS.gene40378:intergenic 40.0%
CAATCCTTGAACTTATGCAC+GGG - 24210:36630-36649 MS.gene40378:intergenic 40.0%
CTTAGATCTAGAAATCCCCA+AGG + 24210:35713-35732 MS.gene40378:intron 40.0%
GAGTATTCATGGAGGAAGTA+TGG + 24210:36667-36686 MS.gene40378:CDS 40.0%
GCAATCCTTGAACTTATGCA+CGG - 24210:36631-36650 MS.gene40378:intergenic 40.0%
GGTGCGGTTAATTTATATGG+AGG - 24210:35214-35233 MS.gene40378:intergenic 40.0%
TACCAGCAGATGAGTATTCA+TGG + 24210:36656-36675 MS.gene40378:CDS 40.0%
TATGAACGGTTCCTGATATG+GGG - 24210:35100-35119 MS.gene40378:intergenic 40.0%
TATGGCTCCAAACCGATTAA+GGG + 24210:36685-36704 MS.gene40378:CDS 40.0%
TGTTTGAGCTAACCTTAGGA+GGG + 24210:37012-37031 MS.gene40378:CDS 40.0%
! AAAGGTTGGTTATGGCTCTT+AGG - 24210:35645-35664 MS.gene40378:intergenic 40.0%
! AAGTGAGTTTAAGCCTTGTG+TGG - 24210:35394-35413 MS.gene40378:intergenic 40.0%
! CAACGCGTCACTTTAATACT+AGG - 24210:34932-34951 MS.gene40378:intergenic 40.0%
! CCTTTCTCATGACTTGGAAA+GGG + 24210:34212-34231 MS.gene40378:intron 40.0%
! CGAGAGTTAAAGGTTGGTTA+TGG - 24210:35653-35672 MS.gene40378:intergenic 40.0%
! CTTGGGGATTTCTAGATCTA+AGG - 24210:35715-35734 MS.gene40378:intergenic 40.0%
! GGATTTTCCAAACATGGATG+AGG + 24210:35341-35360 MS.gene40378:intron 40.0%
!! GAAAATGATGATGATGGGTG+CGG - 24210:35230-35249 MS.gene40378:intergenic 40.0%
!!! AGTGTTTTGAAGAGAGGGTT+GGG - 24210:35442-35461 MS.gene40378:intergenic 40.0%
!!! GAGTTCAGTGTTTTGAAGAG+AGG - 24210:35448-35467 MS.gene40378:intergenic 40.0%
AGAAAGAGGCTGTTTACCAC+GGG - 24210:35982-36001 MS.gene40378:intergenic 45.0%
AGAAATGCCACTGCCAGAAA+AGG + 24210:36315-36334 MS.gene40378:CDS 45.0%
AGTGTTTCCAATGGCAGACT+AGG + 24210:35786-35805 MS.gene40378:CDS 45.0%
AGTGTTTCCAATGGCAGACT+TGG + 24210:35786-35805 MS.gene40378:CDS 45.0%
ATCATCAGTCACCTTGGATG+TGG - 24210:36715-36734 MS.gene40378:intergenic 45.0%
CAGCAGATGAGTATTCATGG+AGG + 24210:36659-36678 MS.gene40378:CDS 45.0%
CCCTTTCCAAGTCATGAGAA+AGG - 24210:34215-34234 MS.gene40378:intergenic 45.0%
CTCCATGAATACTCATCTGC+TGG - 24210:36661-36680 MS.gene40378:intergenic 45.0%
GATGAGTTAGGTGAAAGAGG+TGG - 24210:35852-35871 MS.gene40378:intergenic 45.0%
GCAGTGGCATTTCTTAGATG+CGG - 24210:36309-36328 MS.gene40378:intergenic 45.0%
GGATGTGGTGTTCCCTTAAT+CGG - 24210:36700-36719 MS.gene40378:intergenic 45.0%
GTATGGCTCCAAACCGATTA+AGG + 24210:36684-36703 MS.gene40378:CDS 45.0%
GTGTTTGAGCTAACCTTAGG+AGG + 24210:37011-37030 MS.gene40378:CDS 45.0%
GTTTACCACGGGAGATAGAA+GGG - 24210:36100-36119 MS.gene40378:intergenic 45.0%
TAGTCTGCCATTGGAAACAC+TGG - 24210:36057-36076 MS.gene40378:intergenic 45.0%
TCCAACTTACTCCACCGTAA+AGG + 24210:35501-35520 MS.gene40378:intron 45.0%
TGGTGTTCCCTTAATCGGTT+TGG - 24210:36695-36714 MS.gene40378:intergenic 45.0%
TGTAAGAGGCTGTTTACCAC+GGG - 24210:36111-36130 MS.gene40378:intergenic 45.0%
TGTTTACCACGGGAGATAGA+AGG - 24210:36101-36120 MS.gene40378:intergenic 45.0%
TTAAGGGAACACCACATCCA+AGG + 24210:36701-36720 MS.gene40378:CDS 45.0%
TTCAATGACGGCGATGAAAG+AGG - 24210:36242-36261 MS.gene40378:intergenic 45.0%
TTGGGGCTTGATTATGAAGC+TGG - 24210:36938-36957 MS.gene40378:intergenic 45.0%
TTTACCACGGGAGATAGAAG+GGG - 24210:36099-36118 MS.gene40378:intergenic 45.0%
! ATGGTAGATGGCATTGGACA+TGG - 24210:35942-35961 MS.gene40378:intergenic 45.0%
! GAGGTCTGAAACAGTGATGT+TGG - 24210:35472-35491 MS.gene40378:intergenic 45.0%
! GCCTTTCTCATGACTTGGAA+AGG + 24210:34211-34230 MS.gene40378:intron 45.0%
! TAGAACCCGAGGATGCTTTT+TGG + 24210:35054-35073 MS.gene40378:intron 45.0%
!! TGAATTTGAAGTGGTGGTGG+TGG - 24210:35615-35634 MS.gene40378:intergenic 45.0%
!!! CAGTGTTTTGAAGAGAGGGT+TGG - 24210:35443-35462 MS.gene40378:intergenic 45.0%
!!! GTGTTTTGAAGAGAGGGTTG+GGG - 24210:35441-35460 MS.gene40378:intergenic 45.0%
AACGTTCACCACCCCATATC+AGG + 24210:35086-35105 MS.gene40378:intron 50.0%
AATGACGGCGATGAAAGAGG+CGG - 24210:36239-36258 MS.gene40378:intergenic 50.0%
AGATGGACCAAGTCTGCCAT+TGG - 24210:35796-35815 MS.gene40378:intergenic 50.0%
AGATGGTCCTAGTCTGCCAT+TGG - 24210:36066-36085 MS.gene40378:intergenic 50.0%
AGCTAGGAAAAGGGTGGAGA+AGG + 24210:36857-36876 MS.gene40378:CDS 50.0%
CAGGGGTTGCATTTGGATTG+CGG - 24210:35542-35561 MS.gene40378:intergenic 50.0%
GAGTCCCGTGCATAAGTTCA+AGG + 24210:36623-36642 MS.gene40378:CDS 50.0%
GCAGGGGTGAGAATTTGAGA+TGG - 24210:35813-35832 MS.gene40378:intergenic 50.0%
GCCTTTACGGTGGAGTAAGT+TGG - 24210:35505-35524 MS.gene40378:intergenic 50.0%
GCTGAGAAAGTTAGAACCCG+AGG + 24210:35043-35062 MS.gene40378:intron 50.0%
GGGCTTGATTATGAAGCTGG+TGG - 24210:36935-36954 MS.gene40378:intergenic 50.0%
GGTTGATCAGGGGTTGCATT+TGG - 24210:35549-35568 MS.gene40378:intergenic 50.0%
GTGGCATTTCTTAGATGCGG+AGG - 24210:36306-36325 MS.gene40378:intergenic 50.0%
GTTTACCACCAGAGACAGCA+GGG - 24210:36217-36236 MS.gene40378:intergenic 50.0%
TGAAAGAGGTGGTTTACCGC+TGG - 24210:35841-35860 MS.gene40378:intergenic 50.0%
TTGTCCAGCTAGGAAAAGGG+TGG + 24210:36851-36870 MS.gene40378:CDS 50.0%
TTTACCACCAGAGACAGCAG+GGG - 24210:36216-36235 MS.gene40378:intergenic 50.0%
TTTGTGGCAGCGGTTGATCA+GGG - 24210:35560-35579 MS.gene40378:intergenic 50.0%
! GGGGTGTTTGAGCTAACCTT+AGG + 24210:37008-37027 MS.gene40378:CDS 50.0%
! GGTTGGTTATGGCTCTTAGG+AGG - 24210:35642-35661 MS.gene40378:intergenic 50.0%
! TTCTCCACCCTTTTCCTAGC+TGG - 24210:36858-36877 MS.gene40378:intergenic 50.0%
!! ATTGGAAACACTGGCTTCGC+CGG - 24210:36048-36067 MS.gene40378:intergenic 50.0%
!! ATTTGAAGTGGTGGTGGTGG+AGG - 24210:35612-35631 MS.gene40378:intergenic 50.0%
!! GTGGGTCCAAAAAGCATCCT+CGG - 24210:35063-35082 MS.gene40378:intergenic 50.0%
!! TGGGTCCAAAAAGCATCCTC+GGG - 24210:35062-35081 MS.gene40378:intergenic 50.0%
AACGCTTCTATCGCCGGTGA+TGG - 24210:36159-36178 MS.gene40378:intergenic 55.0%
AATCACTCCGGCGATGTCTC+TGG + 24210:36275-36294 MS.gene40378:CDS 55.0%
ACATGGACCTAGCCTGCCAT+TGG - 24210:35925-35944 MS.gene40378:intergenic 55.0%
AGTGTCTCCAATGGCAGGCT+AGG + 24210:35915-35934 MS.gene40378:CDS 55.0%
ATCACTCCGGCGATGTCTCT+GGG + 24210:36276-36295 MS.gene40378:CDS 55.0%
ATTGGAAACACTGCCGTCGC+CGG - 24210:35778-35797 MS.gene40378:intergenic 55.0%
CTGTTTACCACGGGAGACAG+CGG - 24210:35973-35992 MS.gene40378:intergenic 55.0%
GAACGGTTCCTGATATGGGG+TGG - 24210:35097-35116 MS.gene40378:intergenic 55.0%
GAGATAGAAGGGGTGAGGAG+TGG - 24210:36089-36108 MS.gene40378:intergenic 55.0%
GCCTTTGCTCGCGATATCAC+CGG + 24210:35885-35904 MS.gene40378:CDS 55.0%
GCTGGAAACGCTTCTATCGC+CGG - 24210:36165-36184 MS.gene40378:intergenic 55.0%
GGAGTGGAAGTTTGTGGCAG+CGG - 24210:35570-35589 MS.gene40378:intergenic 55.0%
GGCGAAGCCAGTGTTTCCAA+TGG + 24210:36047-36066 MS.gene40378:CDS 55.0%
GGGGTGGTGAACGTTGAAGT+GGG - 24210:35081-35100 MS.gene40378:intergenic 55.0%
GGGTTGCATTTGGATTGCGG+CGG - 24210:35539-35558 MS.gene40378:intergenic 55.0%
GGTTTACCACCAGAGACAGC+AGG - 24210:36218-36237 MS.gene40378:intergenic 55.0%
GTGGAGGGAGTGGAAGTTTG+TGG - 24210:35576-35595 MS.gene40378:intergenic 55.0%
GTGGGGATGGTAGATGGCAT+TGG - 24210:35948-35967 MS.gene40378:intergenic 55.0%
GTTTACCGCTGGAGACAGCA+GGG - 24210:35830-35849 MS.gene40378:intergenic 55.0%
GTTTGTGGCAGCGGTTGATC+AGG - 24210:35561-35580 MS.gene40378:intergenic 55.0%
TGGGGTGGTGAACGTTGAAG+TGG - 24210:35082-35101 MS.gene40378:intergenic 55.0%
TGTTTACCACGGGAGACAGC+GGG - 24210:35972-35991 MS.gene40378:intergenic 55.0%
TTCATGTCCTCCCCCATCAC+CGG + 24210:36014-36033 MS.gene40378:CDS 55.0%
TTCATGTCCTCCGCCATCAC+CGG + 24210:36143-36162 MS.gene40378:CDS 55.0%
TTGTGGCAGCGGTTGATCAG+GGG - 24210:35559-35578 MS.gene40378:intergenic 55.0%
TTTACCGCTGGAGACAGCAG+GGG - 24210:35829-35848 MS.gene40378:intergenic 55.0%
! AGGGAGTGGGAGCATGGATT+TGG + 24210:36986-37005 MS.gene40378:CDS 55.0%
! ATGGCGGAGGATAGGAGTGA+TGG - 24210:35753-35772 MS.gene40378:intergenic 55.0%
! CTGGTTCAGGTTCAGGGAGT+GGG + 24210:36973-36992 MS.gene40378:CDS 55.0%
! GAGTGGGAGCATGGATTTGG+GGG + 24210:36989-37008 MS.gene40378:CDS 55.0%
! GCAGGGGTGAGGGTATAAGA+TGG - 24210:36200-36219 MS.gene40378:intergenic 55.0%
! GGAGTGGGAGCATGGATTTG+GGG + 24210:36988-37007 MS.gene40378:CDS 55.0%
! GGGAGTGGGAGCATGGATTT+GGG + 24210:36987-37006 MS.gene40378:CDS 55.0%
! GGTTTTCCCAGAGACATCGC+CGG - 24210:36285-36304 MS.gene40378:intergenic 55.0%
! GTGATGGGGGAGGACATGAA+TGG - 24210:36014-36033 MS.gene40378:intergenic 55.0%
! TCTGGTTCAGGTTCAGGGAG+TGG + 24210:36972-36991 MS.gene40378:CDS 55.0%
!! ATAGAAGCGTTTCCAGCGGC+AGG + 24210:36168-36187 MS.gene40378:CDS 55.0%
!! GGCGATAGAAGCGTTTCCAG+CGG + 24210:36164-36183 MS.gene40378:CDS 55.0%
ACCAGAGACAGCAGGGGTGA+GGG - 24210:36210-36229 MS.gene40378:intergenic 60.0%
ACGGCAGTGTCTCCAATGGC+AGG + 24210:35910-35929 MS.gene40378:CDS 60.0%
AGCGTTTCCAGCGGCAGGAT+CGG + 24210:36173-36192 MS.gene40378:CDS 60.0%
AGGTGGCTGAGTAGAGGTGG+AGG - 24210:35592-35611 MS.gene40378:intergenic 60.0%
AGGTTCAGGGAGTGGGAGCA+TGG + 24210:36980-36999 MS.gene40378:CDS 60.0%
ATTGGAGACACTGCCGTCGC+CGG - 24210:35907-35926 MS.gene40378:intergenic 60.0%
CACGGGAGATAGAAGGGGTG+AGG - 24210:36094-36113 MS.gene40378:intergenic 60.0%
CCCATCACCGGCCATTACAC+CGG + 24210:36026-36045 MS.gene40378:CDS 60.0%
CCGGTGTAATGGCCGGTGAT+GGG - 24210:36029-36048 MS.gene40378:intergenic 60.0%
CGGTGTAATGGCCGGTGATG+GGG - 24210:36028-36047 MS.gene40378:intergenic 60.0%
CTCACCCCTTCTATCTCCCG+TGG + 24210:36092-36111 MS.gene40378:CDS 60.0%
CTCCTATCCTCCGCCATCAC+CGG + 24210:35756-35775 MS.gene40378:CDS 60.0%
CTGAGTAGAGGTGGAGGGAG+TGG - 24210:35586-35605 MS.gene40378:intergenic 60.0%
GAAGGGGTGAGGAGTGGAGA+TGG - 24210:36083-36102 MS.gene40378:intergenic 60.0%
GCCGGTGATATCGCGAGCAA+AGG - 24210:35889-35908 MS.gene40378:intergenic 60.0%
GGAAGCGAGCGTGGCCTTTA+CGG - 24210:35518-35537 MS.gene40378:intergenic 60.0%
GGCGACGGCAGTGTTTCCAA+TGG + 24210:35777-35796 MS.gene40378:CDS 60.0%
GGTGGCTGAGTAGAGGTGGA+GGG - 24210:35591-35610 MS.gene40378:intergenic 60.0%
GGTTTACCGCTGGAGACAGC+AGG - 24210:35831-35850 MS.gene40378:intergenic 60.0%
GTTTACCACGGGAGACAGCG+GGG - 24210:35971-35990 MS.gene40378:intergenic 60.0%
TGGAGGTGGCTGAGTAGAGG+TGG - 24210:35595-35614 MS.gene40378:intergenic 60.0%
TGGTGGAGGTGGCTGAGTAG+AGG - 24210:35598-35617 MS.gene40378:intergenic 60.0%
TTTACCACGGGAGACAGCGG+GGG - 24210:35970-35989 MS.gene40378:intergenic 60.0%
! GCTTCTATCGCCGGTGATGG+CGG - 24210:36156-36175 MS.gene40378:intergenic 60.0%
! GGTGTAATGGCCGGTGATGG+GGG - 24210:36027-36046 MS.gene40378:intergenic 60.0%
!! CACTGGCTTCGCCGGTGTAA+TGG - 24210:36040-36059 MS.gene40378:intergenic 60.0%
!! TGAAGTGGTGGTGGTGGAGG+TGG - 24210:35609-35628 MS.gene40378:intergenic 60.0%
AACACTGCCGTCGCCGGTGA+TGG - 24210:35772-35791 MS.gene40378:intergenic 65.0%
ACCCTCACCCCTGCTGTCTC+TGG + 24210:36206-36225 MS.gene40378:CDS 65.0%
AGATGGACCGATCCTGCCGC+TGG - 24210:36183-36202 MS.gene40378:intergenic 65.0%
AGCGAGCGTGGCCTTTACGG+TGG - 24210:35515-35534 MS.gene40378:intergenic 65.0%
CACCAGAGACAGCAGGGGTG+AGG - 24210:36211-36230 MS.gene40378:intergenic 65.0%
CTCACCCCTGCTGTCTCCAG+CGG + 24210:35822-35841 MS.gene40378:CDS 65.0%
CTCACCCCTGCTGTCTCTGG+TGG + 24210:36209-36228 MS.gene40378:CDS 65.0%
GCCGGTGTAATGGCCGGTGA+TGG - 24210:36030-36049 MS.gene40378:intergenic 65.0%
GCTCGCGATATCACCGGCGA+CGG + 24210:35891-35910 MS.gene40378:CDS 65.0%
GGCGACGGCAGTGTCTCCAA+TGG + 24210:35906-35925 MS.gene40378:CDS 65.0%
GGCTTCGCCGGTGTAATGGC+CGG - 24210:36036-36055 MS.gene40378:intergenic 65.0%
!! GTAATGGCCGGTGATGGGGG+AGG - 24210:36024-36043 MS.gene40378:intergenic 65.0%
!! TCTATCGCCGGTGATGGCGG+AGG - 24210:36153-36172 MS.gene40378:intergenic 65.0%
GATTGCGGCGGAAGCGAGCG+TGG - 24210:35527-35546 MS.gene40378:intergenic 70.0%
GCGGGGGTGGGGATGGTAGA+TGG - 24210:35954-35973 MS.gene40378:intergenic 70.0%
TCCTCCGCCATCACCGGCGA+CGG + 24210:35762-35781 MS.gene40378:CDS 70.0%
! ACTGCCGTCGCCGGTGATGG+CGG - 24210:35769-35788 MS.gene40378:intergenic 70.0%
!! CGCCGGTGATGGCGGAGGAT+AGG - 24210:35761-35780 MS.gene40378:intergenic 70.0%
ACCACGGGAGACAGCGGGGG+TGG - 24210:35967-35986 MS.gene40378:intergenic 75.0%
CACGGGAGACAGCGGGGGTG+GGG - 24210:35965-35984 MS.gene40378:intergenic 75.0%
CCACGGGAGACAGCGGGGGT+GGG - 24210:35966-35985 MS.gene40378:intergenic 75.0%
GGAGACAGCGGGGGTGGGGA+TGG - 24210:35961-35980 MS.gene40378:intergenic 75.0%
! CCCACCCCCGCTGTCTCCCG+TGG + 24210:35963-35982 MS.gene40378:CDS 80.0%
!!! GCCGTCGCCGGTGATGGCGG+AGG - 24210:35766-35785 MS.gene40378:intergenic 80.0%


Chromosome Type Strat End Strand Name
24210 gene 33906 37040 33906 ID=MS.gene40378
24210 mRNA 33906 37040 33906 ID=MS.gene40378.t1;Parent=MS.gene40378
24210 exon 33906 33915 33906 ID=MS.gene40378.t1.exon1;Parent=MS.gene40378.t1
24210 CDS 33906 33915 33906 ID=cds.MS.gene40378.t1;Parent=MS.gene40378.t1
24210 exon 35718 36336 35718 ID=MS.gene40378.t1.exon2;Parent=MS.gene40378.t1
24210 CDS 35718 36336 35718 ID=cds.MS.gene40378.t1;Parent=MS.gene40378.t1
24210 exon 36597 36722 36597 ID=MS.gene40378.t1.exon3;Parent=MS.gene40378.t1
24210 CDS 36597 36722 36597 ID=cds.MS.gene40378.t1;Parent=MS.gene40378.t1
24210 exon 36821 37040 36821 ID=MS.gene40378.t1.exon4;Parent=MS.gene40378.t1
24210 CDS 36821 37040 36821 ID=cds.MS.gene40378.t1;Parent=MS.gene40378.t1
Gene Sequence

>MS.gene40378

ATGTTAAAAGGTAAATTTCAATATTTTTTTTTTGTTGAGAAAATATAAATTTCATTTGTGCCATTGTTATTATAGAGTTAATACAAGTAAGTTTGTGGAATCAAAATTAATTGATATAGGAACATCAACTACAAATAATTATTAGTAATGTGTTTCTTTGATCATGATTATTTATATTTTTGTTTCTTATAAACAAGACTAAAAGGAGCAATTAAGAAGAATCACAAAATGATTAATGTTGTAAAAAAATAAAAAAGAAACTTGATTAAAAACATAATCGTTTCCGATTTTTCTTTAAAAATACTGCCTTTCTCATGACTTGGAAAGGGAAGTGTTTAAAAAATACAATAATAATTTTATTAAAGTTACACAATGAATTACTCATAATTTGAGGCGAAACTAGTACGACAAAAAATATTTTTTTAGTTGAGTAATTTAGTATATTTTGTAATATGTTGCTCCAATAATATATATTTAGCTATCACAATTAAGTATTTTTAATATCAGTAATCAGGATTATATTTTCAATGAGTATTACGAAGAAAGTACTTCCTCTGCTCACTTTTATATAAAAGAAAAAATGTTGACCTTTTTTCGTCTAAAAAAAGTGTTAATGATTTGTTTCTTTTTCATTAGAAATATTGATAAATTTTCAAATGTGTTTGAACTCAGTGGGTTTCATTTTTTTTTATTTAAGGAAAGATAAATTTCATTTGTGCCATTGTTATTATAGAGGTAATATTAAAAACAAGTAAGTTTGTGGAATTAAAATAATTGATACAGGAACATCAAATACAAATCATTATTTTCAATGTGTTTCTTTAATCGTAATAATTTATATCTTTTGTTTGTTATAGTATAAACAAGACTAAAGAGAGTCATTAAGAATAATGACAAAACGTTTAATGCTGTCAAAAAACAAAAAGAAACTTGATTAAAAACACAATCATTTTTTATTTTTCTTTAAAAACGTTGCCTTTTTTATGACTAGAAAAGGGAAAGTCTTTAAAAAAATACAGTAATCCTAGTATTAAAGTGACGCGTTGAATTGAATTACTCATAATTGATTTTTACTTGTTCTTTTGACAATATGGAAGTAATTGATTTTCTAGATAATCATTCTTTATGAAATTCAACGCTGAGAAAGTTAGAACCCGAGGATGCTTTTTGGACCCACTTCAACGTTCACCACCCCATATCAGGAACCGTTCATAATTCGTCAGATTAATCTCCACCCTTTGATCAAGTAGAATAAAAGGAAATTAAAAAACTCATTGACTAACTTTTGTTTTTTTGCCTCTCACTCCTCCATATAAATTAACCGCACCCATCATCATCATTTTCCTTACAAAATCCTAACATAAACTCATACAGTATATTCTTCCTTAACCTCAACCATTGTCCATTTTTAGTAGAAAATGACTTTGAGATTGATGGATTTTCCAAACATGGATGAGGAAAAAGAAAAGGCAATATTAGAAACTGCCACACAAGGCTTAAACTCACTTGCCAACTTCGCTAATAATGTCTCTCCCCAACCCTCTCTTCAAAACACTGAACTCACCAACATCACTGTTTCAGACCTCAAGAAACTATCCAACTTACTCCACCGTAAAGGCCACGCTCGCTTCCGCCGCAATCCAAATGCAACCCCTGATCAACCGCTGCCACAAACTTCCACTCCCTCCACCTCTACTCAGCCACCTCCACCACCACCACTTCAAATTCAAATTCCTCCTAAGAGCCATAACCAACCTTTAACTCTCGATTTTACTAAACCTTACACCTTTAAATCTAACCCTAAATCCTTAGATCTAGAAATCCCCAAGGAAACATTTAGTTTTCCATCACTCCTATCCTCCGCCATCACCGGCGACGGCAGTGTTTCCAATGGCAGACTTGGTCCATCTCAAATTCTCACCCCTGCTGTCTCCAGCGGTAAACCACCTCTTTCACCTAACTCATCATTCATGTCATCTGCCTTTGCTCGCGATATCACCGGCGACGGCAGTGTCTCCAATGGCAGGCTAGGTCCATGTCCAATGCCATCTACCATCCCCACCCCCGCTGTCTCCCGTGGTAAACAGCCTCTTTCTTCTATCTCACCATTCATGTCCTCCCCCATCACCGGCCATTACACCGGCGAAGCCAGTGTTTCCAATGGCAGACTAGGACCATCTCCACTCCTCACCCCTTCTATCTCCCGTGGTAAACAGCCTCTTACATCTTACTCATCTTTCATGTCCTCCGCCATCACCGGCGATAGAAGCGTTTCCAGCGGCAGGATCGGTCCATCTTATACCCTCACCCCTGCTGTCTCTGGTGGTAAACCGCCTCTTTCATCGCCGTCATTGAAGAAAAGCTGTCACAATCACTCCGGCGATGTCTCTGGGAAAACCTCCGCATCTAAGAAATGCCACTGCCAGAAAAGGTAAAATTAATTTACGAGAATCATTTGTTAATAGTCAACATTCAATGGTCACGGCACGCGTGAAAACGACAACATGAGTTTCTTTGTTATGTTTCGCGTTTGTCGTAAAAAAGACAAGGAAAACAAATGTCACAAACAGAATCTTGACCCCGCATATTTTATTTGTCATTTAGTCATTATTCTTTGCTTTTGACTGCTGTCTGACTTGTGCATGTTAGCAACAATGACATATTATAACGTTTTGATTTTATTTTTTTTAGGAAAAATCGGAACAGGAGACAAGTGAGAGTCCCGTGCATAAGTTCAAGGATTGCTGATATACCAGCAGATGAGTATTCATGGAGGAAGTATGGCTCCAAACCGATTAAGGGAACACCACATCCAAGGTGACTGATGATTGATTTATAGCCGTTGATTTATTTGAATATGGTAAAAGGAATGTTTAATAAGGTTGAATATGTTTGTTTTGTTTTGTTTATTTCAGGGGTTATTATAGGTGCACTATGTCTAAAAATTGTCCAGCTAGGAAAAGGGTGGAGAAGGCGAAAGATGATCCAAATATACTAGTTGTAACGTATGAGTTTGAGCATCGTCACCACCAGCTTCATAATCAAGCCCCAATGCAAGAGAATAATTCTGGTTCAGGTTCAGGGAGTGGGAGCATGGATTTGGGGGTGTTTGAGCTAACCTTAGGAGGGAATTAG
Protein sequence

>MS.gene40378.t1

MLKDLEIPKETFSFPSLLSSAITGDGSVSNGRLGPSQILTPAVSSGKPPLSPNSSFMSSAFARDITGDGSVSNGRLGPCPMPSTIPTPAVSRGKQPLSSISPFMSSPITGHYTGEASVSNGRLGPSPLLTPSISRGKQPLTSYSSFMSSAITGDRSVSSGRIGPSYTLTPAVSGGKPPLSSPSLKKSCHNHSGDVSGKTSASKKCHCQKRKNRNRRQVRVPCISSRIADIPADEYSWRKYGSKPIKGTPHPRGYYRCTMSKNCPARKRVEKAKDDPNILVVTYEFEHRHHQLHNQAPMQENNSGSGSGSGSMDLGVFELTLGGN