Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40820.t1 | XP_024632961.1 | 82.2 | 793 | 88 | 5 | 1 | 740 | 1 | 793 | 0.00E+00 | 1282.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40820.t1 | Q9SZL8 | 28.0 | 611 | 395 | 10 | 32 | 640 | 70 | 637 | 5.8e-66 | 253.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40820.t1 | D3YBB9 | 74.0 | 774 | 156 | 5 | 1 | 739 | 49 | 812 | 0.0e+00 | 1128.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene40820.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40820.t1 | MTR_0558s0020 | 86.824 | 296 | 38 | 1 | 1 | 295 | 1 | 296 | 0.0 | 543 |
MS.gene40820.t1 | MTR_1g083640 | 82.394 | 284 | 34 | 1 | 1 | 268 | 1 | 284 | 1.45e-170 | 491 |
MS.gene40820.t1 | MTR_8g446020 | 73.559 | 295 | 39 | 1 | 1 | 295 | 1 | 256 | 2.37e-152 | 443 |
MS.gene40820.t1 | MTR_6g090505 | 82.700 | 237 | 41 | 0 | 65 | 301 | 1 | 237 | 8.69e-141 | 418 |
MS.gene40820.t1 | MTR_6g090505 | 52.792 | 197 | 27 | 4 | 396 | 590 | 230 | 362 | 1.89e-49 | 178 |
MS.gene40820.t1 | MTR_2g014100 | 81.224 | 245 | 37 | 1 | 1 | 236 | 1 | 245 | 9.87e-140 | 411 |
MS.gene40820.t1 | MTR_0337s0040 | 71.923 | 260 | 33 | 2 | 1 | 259 | 1 | 221 | 1.03e-123 | 369 |
MS.gene40820.t1 | MTR_3g008240 | 84.236 | 203 | 31 | 1 | 1 | 202 | 1 | 203 | 2.51e-119 | 357 |
MS.gene40820.t1 | MTR_4g040430 | 82.673 | 202 | 31 | 1 | 1 | 202 | 1 | 198 | 1.56e-115 | 347 |
MS.gene40820.t1 | MTR_5g071590 | 72.778 | 180 | 36 | 2 | 1 | 167 | 1 | 180 | 7.93e-88 | 274 |
MS.gene40820.t1 | MTR_0337s0060 | 52.848 | 316 | 24 | 5 | 447 | 734 | 21 | 239 | 6.47e-87 | 274 |
MS.gene40820.t1 | MTR_1g055240 | 87.324 | 142 | 18 | 0 | 91 | 232 | 3 | 144 | 2.30e-86 | 269 |
MS.gene40820.t1 | MTR_0019s0290 | 81.579 | 152 | 28 | 0 | 82 | 233 | 9 | 160 | 9.13e-86 | 268 |
MS.gene40820.t1 | MTR_3g028680 | 81.457 | 151 | 25 | 1 | 593 | 740 | 1 | 151 | 6.60e-81 | 256 |
MS.gene40820.t1 | MTR_2g067090 | 78.378 | 148 | 29 | 1 | 596 | 740 | 99 | 246 | 8.32e-72 | 236 |
MS.gene40820.t1 | MTR_4g133495 | 63.536 | 181 | 40 | 2 | 551 | 728 | 88 | 245 | 4.07e-68 | 226 |
MS.gene40820.t1 | MTR_4g133340 | 63.536 | 181 | 40 | 2 | 551 | 728 | 88 | 245 | 4.07e-68 | 226 |
MS.gene40820.t1 | MTR_1281s0010 | 79.817 | 109 | 22 | 0 | 19 | 127 | 1 | 109 | 3.84e-55 | 184 |
MS.gene40820.t1 | MTR_6g051425 | 32.188 | 320 | 182 | 7 | 40 | 341 | 22 | 324 | 1.72e-38 | 146 |
MS.gene40820.t1 | MTR_4g008820 | 83.750 | 80 | 12 | 1 | 1 | 79 | 125 | 204 | 1.43e-31 | 131 |
MS.gene40820.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 3.44e-31 | 122 |
MS.gene40820.t1 | MTR_1g070355 | 26.543 | 324 | 217 | 6 | 41 | 362 | 80 | 384 | 1.24e-19 | 94.0 |
MS.gene40820.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 670 | 740 | 46 | 116 | 3.46e-18 | 82.8 |
MS.gene40820.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.23e-13 | 67.0 |
MS.gene40820.t1 | MTR_0402s0040 | 24.865 | 185 | 120 | 4 | 49 | 233 | 40 | 205 | 1.44e-13 | 74.3 |
MS.gene40820.t1 | MTR_4g035820 | 22.069 | 290 | 193 | 7 | 17 | 299 | 61 | 324 | 1.96e-12 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40820.t1 | AT4G38180 | 28.595 | 619 | 381 | 12 | 32 | 640 | 70 | 637 | 4.27e-74 | 256 |
MS.gene40820.t1 | AT4G15090 | 25.431 | 696 | 450 | 15 | 50 | 728 | 66 | 709 | 6.04e-63 | 226 |
MS.gene40820.t1 | AT4G15090 | 25.431 | 696 | 450 | 15 | 50 | 728 | 66 | 709 | 6.04e-63 | 226 |
MS.gene40820.t1 | AT4G15090 | 25.431 | 696 | 450 | 15 | 50 | 728 | 66 | 709 | 6.04e-63 | 226 |
MS.gene40820.t1 | AT4G15090 | 25.431 | 696 | 450 | 15 | 50 | 728 | 66 | 709 | 6.04e-63 | 226 |
MS.gene40820.t1 | AT4G15090 | 25.431 | 696 | 450 | 15 | 50 | 728 | 66 | 709 | 6.04e-63 | 226 |
MS.gene40820.t1 | AT2G27110 | 26.006 | 696 | 414 | 20 | 10 | 694 | 29 | 634 | 1.41e-55 | 205 |
MS.gene40820.t1 | AT2G27110 | 26.006 | 696 | 414 | 20 | 10 | 694 | 29 | 634 | 1.41e-55 | 205 |
MS.gene40820.t1 | AT2G27110 | 27.863 | 524 | 318 | 14 | 180 | 694 | 17 | 489 | 1.12e-54 | 200 |
MS.gene40820.t1 | AT3G06250 | 26.066 | 610 | 349 | 15 | 34 | 636 | 189 | 703 | 1.02e-53 | 199 |
MS.gene40820.t1 | AT3G06250 | 26.066 | 610 | 349 | 15 | 34 | 636 | 189 | 703 | 1.02e-53 | 199 |
MS.gene40820.t1 | AT3G06250 | 26.066 | 610 | 349 | 15 | 34 | 636 | 189 | 703 | 1.02e-53 | 199 |
MS.gene40820.t1 | AT1G76320 | 25.382 | 654 | 413 | 18 | 50 | 695 | 12 | 598 | 1.41e-52 | 194 |
MS.gene40820.t1 | AT1G76320 | 25.421 | 653 | 412 | 18 | 50 | 694 | 12 | 597 | 3.85e-52 | 194 |
MS.gene40820.t1 | AT1G76320 | 25.421 | 653 | 412 | 18 | 50 | 694 | 12 | 597 | 4.50e-52 | 193 |
MS.gene40820.t1 | AT1G76320 | 25.421 | 653 | 412 | 18 | 50 | 694 | 12 | 597 | 4.50e-52 | 193 |
MS.gene40820.t1 | AT3G22170 | 24.018 | 662 | 420 | 17 | 34 | 683 | 69 | 659 | 1.61e-49 | 187 |
MS.gene40820.t1 | AT3G22170 | 24.018 | 662 | 420 | 17 | 34 | 683 | 69 | 659 | 1.61e-49 | 187 |
MS.gene40820.t1 | AT5G18960 | 25.080 | 622 | 363 | 17 | 24 | 636 | 200 | 727 | 8.84e-49 | 184 |
MS.gene40820.t1 | AT5G18960 | 25.080 | 622 | 363 | 17 | 24 | 636 | 200 | 727 | 8.84e-49 | 184 |
MS.gene40820.t1 | AT4G38170 | 25.123 | 406 | 271 | 9 | 235 | 637 | 24 | 399 | 1.45e-45 | 171 |
MS.gene40820.t1 | AT5G28530 | 25.765 | 621 | 375 | 21 | 40 | 635 | 60 | 619 | 5.81e-44 | 169 |
MS.gene40820.t1 | AT5G28530 | 25.812 | 616 | 377 | 20 | 40 | 635 | 60 | 615 | 7.76e-44 | 169 |
MS.gene40820.t1 | AT5G28530 | 25.812 | 616 | 377 | 20 | 40 | 635 | 60 | 615 | 7.76e-44 | 169 |
MS.gene40820.t1 | AT1G10240 | 26.043 | 599 | 374 | 19 | 49 | 634 | 62 | 604 | 9.54e-44 | 168 |
MS.gene40820.t1 | AT1G10240 | 26.043 | 599 | 374 | 19 | 49 | 634 | 62 | 604 | 9.54e-44 | 168 |
MS.gene40820.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 219 | 696 | 106 | 558 | 2.93e-43 | 167 |
MS.gene40820.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 219 | 696 | 163 | 615 | 5.47e-43 | 167 |
MS.gene40820.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 219 | 696 | 163 | 615 | 5.47e-43 | 167 |
MS.gene40820.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 219 | 696 | 163 | 615 | 5.53e-43 | 167 |
MS.gene40820.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 219 | 696 | 163 | 615 | 7.17e-43 | 167 |
MS.gene40820.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 219 | 696 | 163 | 615 | 7.17e-43 | 167 |
MS.gene40820.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 219 | 696 | 177 | 629 | 7.21e-43 | 167 |
MS.gene40820.t1 | AT2G32250 | 24.444 | 720 | 432 | 20 | 4 | 718 | 10 | 622 | 1.14e-41 | 163 |
MS.gene40820.t1 | AT2G32250 | 24.444 | 720 | 432 | 20 | 4 | 718 | 10 | 622 | 1.41e-41 | 163 |
MS.gene40820.t1 | AT2G32250 | 24.444 | 720 | 432 | 20 | 4 | 718 | 10 | 622 | 1.41e-41 | 163 |
MS.gene40820.t1 | AT1G80010 | 25.323 | 620 | 381 | 20 | 41 | 637 | 101 | 661 | 1.42e-41 | 162 |
MS.gene40820.t1 | AT2G32250 | 24.444 | 720 | 432 | 20 | 4 | 718 | 10 | 622 | 1.42e-41 | 163 |
MS.gene40820.t1 | AT2G32250 | 24.444 | 720 | 432 | 20 | 4 | 718 | 10 | 622 | 1.42e-41 | 163 |
MS.gene40820.t1 | AT2G32250 | 24.444 | 720 | 432 | 20 | 4 | 718 | 10 | 622 | 1.42e-41 | 163 |
MS.gene40820.t1 | AT2G32250 | 24.451 | 683 | 407 | 18 | 41 | 718 | 3 | 581 | 5.57e-41 | 161 |
MS.gene40820.t1 | AT2G32250 | 24.451 | 683 | 407 | 18 | 41 | 718 | 3 | 581 | 5.74e-41 | 161 |
MS.gene40820.t1 | AT1G52520 | 24.338 | 604 | 394 | 18 | 41 | 637 | 91 | 638 | 6.82e-35 | 142 |
MS.gene40820.t1 | AT5G28530 | 23.404 | 611 | 339 | 24 | 40 | 635 | 60 | 556 | 7.39e-25 | 110 |
MS.gene40820.t1 | AT5G28530 | 23.432 | 606 | 341 | 23 | 40 | 635 | 60 | 552 | 1.10e-24 | 110 |
Find 107 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 1.2:+59815751 | MS.gene40820:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 1.2:+59815442 | MS.gene40820:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 1.2:-59816577 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 1.2:+59815709 | MS.gene40820:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 1.2:+59814658 | MS.gene40820:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 1.2:+59815161 | MS.gene40820:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 1.2:+59815194 | MS.gene40820:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 1.2:-59815288 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 1.2:-59816571 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 1.2:+59815483 | MS.gene40820:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 1.2:+59816423 | MS.gene40820:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 1.2:-59814708 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 1.2:+59816006 | MS.gene40820:CDS |
ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 1.2:-59815306 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 1.2:+59815583 | MS.gene40820:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 1.2:+59816415 | MS.gene40820:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 1.2:+59814715 | MS.gene40820:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 1.2:+59814707 | MS.gene40820:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 1.2:+59815582 | MS.gene40820:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 1.2:-59816299 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 1.2:-59814178 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 1.2:+59816563 | MS.gene40820:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 1.2:-59816553 | None:intergenic |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 1.2:+59816448 | MS.gene40820:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 1.2:+59813949 | MS.gene40820:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 1.2:+59816131 | MS.gene40820:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 1.2:-59816054 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 1.2:+59814020 | MS.gene40820:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 1.2:+59816089 | MS.gene40820:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 1.2:-59816055 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 1.2:+59814355 | MS.gene40820:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 1.2:+59814237 | MS.gene40820:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 1.2:-59815299 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 1.2:+59814220 | MS.gene40820:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 1.2:-59816232 | None:intergenic |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 1.2:+59814385 | MS.gene40820:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 1.2:+59813874 | MS.gene40820:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 1.2:+59815373 | MS.gene40820:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 1.2:+59815537 | MS.gene40820:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 1.2:+59816132 | MS.gene40820:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 1.2:+59814069 | MS.gene40820:CDS |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 1.2:-59814214 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 1.2:+59814007 | MS.gene40820:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 1.2:+59814498 | MS.gene40820:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 1.2:-59814325 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 1.2:+59814063 | MS.gene40820:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 1.2:+59815899 | MS.gene40820:intron |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 1.2:-59815174 | None:intergenic |
CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 1.2:+59816524 | MS.gene40820:CDS |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 1.2:+59815484 | MS.gene40820:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 1.2:+59814511 | MS.gene40820:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 1.2:+59815723 | MS.gene40820:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 1.2:-59815803 | None:intergenic |
GAAGCGATGGGTCAAGGAGT+TGG | 0.502080 | 1.2:+59814430 | MS.gene40820:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 1.2:-59814603 | None:intergenic |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 1.2:-59814313 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 1.2:+59815570 | MS.gene40820:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 1.2:+59816068 | MS.gene40820:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 1.2:-59814469 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 1.2:+59815742 | MS.gene40820:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 1.2:+59815588 | MS.gene40820:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 1.2:-59816048 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 1.2:-59815691 | None:intergenic |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 1.2:+59816069 | MS.gene40820:CDS |
ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 1.2:-59815319 | None:intergenic |
GAGAACATCTTATGAAGCGA+TGG | 0.538371 | 1.2:+59814417 | MS.gene40820:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 1.2:+59814114 | MS.gene40820:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 1.2:-59815686 | None:intergenic |
TGTTATGCTTGTAACAAAGA+AGG | 0.541604 | 1.2:+59814103 | MS.gene40820:CDS |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 1.2:+59815900 | MS.gene40820:intron |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 1.2:+59814115 | MS.gene40820:CDS |
TCTTATGAAGCGATGGGTCA+AGG | 0.545849 | 1.2:+59814424 | MS.gene40820:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 1.2:+59813939 | MS.gene40820:CDS |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 1.2:+59816289 | MS.gene40820:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 1.2:+59814565 | MS.gene40820:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 1.2:+59813898 | MS.gene40820:CDS |
GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 1.2:+59816523 | MS.gene40820:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 1.2:+59816375 | MS.gene40820:CDS |
GCGATGGGTCAAGGAGTTGG+AGG | 0.575794 | 1.2:+59814433 | MS.gene40820:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 1.2:-59815804 | None:intergenic |
ATGTCTATAAGATATATAAG+TGG | 0.581538 | 1.2:+59814272 | MS.gene40820:CDS |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 1.2:-59816535 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 1.2:+59813863 | MS.gene40820:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 1.2:+59816416 | MS.gene40820:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 1.2:+59816411 | MS.gene40820:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 1.2:+59816038 | MS.gene40820:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 1.2:-59816491 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 1.2:+59814504 | MS.gene40820:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 1.2:-59816323 | None:intergenic |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 1.2:+59814507 | MS.gene40820:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 1.2:+59816378 | MS.gene40820:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 1.2:+59815801 | MS.gene40820:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 1.2:-59814163 | None:intergenic |
AGAACATCTTATGAAGCGAT+GGG | 0.621635 | 1.2:+59814418 | MS.gene40820:CDS |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 1.2:-59815539 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.624321 | 1.2:+59814438 | MS.gene40820:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 1.2:-59816053 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 1.2:+59815374 | MS.gene40820:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 1.2:-59816296 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 1.2:+59815724 | MS.gene40820:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 1.2:-59816274 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 1.2:+59816400 | MS.gene40820:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 1.2:-59816150 | None:intergenic |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 1.2:+59816133 | MS.gene40820:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 1.2:+59815984 | MS.gene40820:CDS |
TCAAACCATATACACAGACC+AGG | 0.683597 | 1.2:+59815301 | MS.gene40820:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 1.2:+59815985 | MS.gene40820:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTCTATAAGATATATAAG+TGG | + | chr1.2:59814272-59814291 | MS.gene40820:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr1.2:59814063-59814082 | MS.gene40820:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | + | chr1.2:59814007-59814026 | MS.gene40820:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr1.2:59814890-59814909 | MS.gene40820:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr1.2:59815512-59815531 | MS.gene40820:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr1.2:59814862-59814881 | MS.gene40820:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr1.2:59815350-59815369 | None:intergenic | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr1.2:59814069-59814088 | MS.gene40820:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr1.2:59814707-59814726 | MS.gene40820:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr1.2:59814733-59814752 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr1.2:59815883-59815902 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | + | chr1.2:59813939-59813958 | MS.gene40820:CDS | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr1.2:59815709-59815728 | MS.gene40820:CDS | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | + | chr1.2:59813898-59813917 | MS.gene40820:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr1.2:59814780-59814799 | MS.gene40820:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr1.2:59815848-59815867 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr1.2:59815883-59815902 | MS.gene40820:intron | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr1.2:59815442-59815461 | MS.gene40820:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr1.2:59814882-59814901 | MS.gene40820:intron | 25.0% |
!! | CAAAGTTTTCACAATTGAAA+AGG | + | chr1.2:59815943-59815962 | MS.gene40820:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr1.2:59815138-59815157 | MS.gene40820:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr1.2:59815984-59816003 | MS.gene40820:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr1.2:59814059-59814078 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr1.2:59814889-59814908 | MS.gene40820:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr1.2:59814385-59814404 | MS.gene40820:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr1.2:59815516-59815535 | MS.gene40820:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr1.2:59815985-59816004 | MS.gene40820:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr1.2:59814953-59814972 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr1.2:59814115-59814134 | MS.gene40820:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr1.2:59814715-59814734 | MS.gene40820:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr1.2:59816563-59816582 | MS.gene40820:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr1.2:59815483-59815502 | MS.gene40820:CDS | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | + | chr1.2:59813863-59813882 | MS.gene40820:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr1.2:59815484-59815503 | MS.gene40820:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr1.2:59815177-59815196 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr1.2:59816056-59816075 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr1.2:59814658-59814677 | MS.gene40820:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr1.2:59815888-59815907 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr1.2:59814819-59814838 | MS.gene40820:intron | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr1.2:59815886-59815905 | MS.gene40820:intron | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr1.2:59815398-59815417 | MS.gene40820:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr1.2:59816057-59816076 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr1.2:59814711-59814730 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr1.2:59814204-59814223 | MS.gene40820:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr1.2:59813949-59813968 | MS.gene40820:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr1.2:59815694-59815713 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr1.2:59814114-59814133 | MS.gene40820:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr1.2:59814586-59814605 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr1.2:59815828-59815847 | None:intergenic | 30.0% | |
TGTTATGCTTGTAACAAAGA+AGG | + | chr1.2:59814103-59814122 | MS.gene40820:CDS | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr1.2:59816574-59816593 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr1.2:59814472-59814491 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr1.2:59815097-59815116 | MS.gene40820:intron | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr1.2:59814316-59814335 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr1.2:59814237-59814256 | MS.gene40820:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr1.2:59814462-59814481 | MS.gene40820:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr1.2:59816400-59816419 | MS.gene40820:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr1.2:59815291-59815310 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr1.2:59815341-59815360 | MS.gene40820:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | + | chr1.2:59816672-59816691 | MS.gene40820:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr1.2:59816556-59816575 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr1.2:59816168-59816187 | MS.gene40820:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr1.2:59816068-59816087 | MS.gene40820:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr1.2:59814794-59814813 | MS.gene40820:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr1.2:59816448-59816467 | MS.gene40820:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr1.2:59816069-59816088 | MS.gene40820:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr1.2:59816165-59816184 | MS.gene40820:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | + | chr1.2:59814620-59814639 | MS.gene40820:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | + | chr1.2:59814621-59814640 | MS.gene40820:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr1.2:59816233-59816252 | MS.gene40820:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr1.2:59815353-59815372 | MS.gene40820:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr1.2:59815723-59815742 | MS.gene40820:CDS | 35.0% | |
AGAACATCTTATGAAGCGAT+GGG | + | chr1.2:59814418-59814437 | MS.gene40820:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr1.2:59814020-59814039 | MS.gene40820:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | - | chr1.2:59814920-59814939 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr1.2:59815724-59815743 | MS.gene40820:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr1.2:59814355-59814374 | MS.gene40820:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr1.2:59816058-59816077 | None:intergenic | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr1.2:59814203-59814222 | MS.gene40820:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr1.2:59815570-59815589 | MS.gene40820:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr1.2:59814198-59814217 | MS.gene40820:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr1.2:59816654-59816673 | MS.gene40820:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr1.2:59816629-59816648 | MS.gene40820:intron | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr1.2:59814140-59814159 | MS.gene40820:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr1.2:59814498-59814517 | MS.gene40820:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | - | chr1.2:59814929-59814948 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr1.2:59814181-59814200 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr1.2:59815194-59815213 | MS.gene40820:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | + | chr1.2:59816673-59816692 | MS.gene40820:intron | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr1.2:59816006-59816025 | MS.gene40820:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr1.2:59815653-59815672 | MS.gene40820:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr1.2:59814800-59814819 | MS.gene40820:intron | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr1.2:59815526-59815545 | MS.gene40820:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr1.2:59815366-59815385 | MS.gene40820:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr1.2:59816502-59816521 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr1.2:59816235-59816254 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr1.2:59815583-59815602 | MS.gene40820:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr1.2:59816175-59816194 | MS.gene40820:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr1.2:59815237-59815256 | MS.gene40820:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr1.2:59816236-59816255 | MS.gene40820:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr1.2:59815689-59815708 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr1.2:59815047-59815066 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr1.2:59816580-59816599 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | + | chr1.2:59813874-59813893 | MS.gene40820:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr1.2:59815900-59815919 | MS.gene40820:intron | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr1.2:59816132-59816151 | MS.gene40820:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | + | chr1.2:59814933-59814952 | MS.gene40820:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr1.2:59816411-59816430 | MS.gene40820:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr1.2:59816131-59816150 | MS.gene40820:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | + | chr1.2:59816289-59816308 | MS.gene40820:CDS | 40.0% | |
CTGTCTATGAACCATCTGTT+GGG | + | chr1.2:59816524-59816543 | MS.gene40820:CDS | 40.0% | |
GAGAACATCTTATGAAGCGA+TGG | + | chr1.2:59814417-59814436 | MS.gene40820:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr1.2:59816277-59816296 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr1.2:59816302-59816321 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr1.2:59815899-59815918 | MS.gene40820:intron | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr1.2:59815301-59815320 | MS.gene40820:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr1.2:59815043-59815062 | MS.gene40820:intron | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | - | chr1.2:59814632-59814651 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr1.2:59815302-59815321 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | + | chr1.2:59815161-59815180 | MS.gene40820:intron | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | + | chr1.2:59816038-59816057 | MS.gene40820:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | - | chr1.2:59816326-59816345 | None:intergenic | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | - | chr1.2:59816299-59816318 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr1.2:59816642-59816661 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | + | chr1.2:59815751-59815770 | MS.gene40820:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr1.2:59816494-59816513 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr1.2:59816178-59816197 | MS.gene40820:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr1.2:59815582-59815601 | MS.gene40820:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr1.2:59814154-59814173 | None:intergenic | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | + | chr1.2:59814507-59814526 | MS.gene40820:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | + | chr1.2:59814565-59814584 | MS.gene40820:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr1.2:59814166-59814185 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr1.2:59815542-59815561 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr1.2:59815801-59815820 | MS.gene40820:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr1.2:59816153-59816172 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | - | chr1.2:59814328-59814347 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr1.2:59814208-59814227 | MS.gene40820:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr1.2:59814504-59814523 | MS.gene40820:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | + | chr1.2:59815742-59815761 | MS.gene40820:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr1.2:59816051-59816070 | None:intergenic | 45.0% | |
GCTGTCTATGAACCATCTGT+TGG | + | chr1.2:59816523-59816542 | MS.gene40820:CDS | 45.0% | |
TCTTATGAAGCGATGGGTCA+AGG | + | chr1.2:59814424-59814443 | MS.gene40820:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr1.2:59816133-59816152 | MS.gene40820:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr1.2:59814606-59814625 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr1.2:59816423-59816442 | MS.gene40820:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr1.2:59814217-59814236 | None:intergenic | 45.0% | |
! | ACTAGCCTGGTCTGTGTATA+TGG | - | chr1.2:59815309-59815328 | None:intergenic | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr1.2:59815605-59815624 | MS.gene40820:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr1.2:59815588-59815607 | MS.gene40820:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr1.2:59814220-59814239 | MS.gene40820:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr1.2:59814628-59814647 | MS.gene40820:CDS | 45.0% |
ACTTCAACAACGCACTAGCC+TGG | - | chr1.2:59815322-59815341 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr1.2:59815806-59815825 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr1.2:59815537-59815556 | MS.gene40820:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr1.2:59816089-59816108 | MS.gene40820:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr1.2:59815374-59815393 | MS.gene40820:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr1.2:59816375-59816394 | MS.gene40820:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr1.2:59816416-59816435 | MS.gene40820:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | + | chr1.2:59814909-59814928 | MS.gene40820:intron | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr1.2:59815373-59815392 | MS.gene40820:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr1.2:59816538-59816557 | None:intergenic | 50.0% |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr1.2:59816415-59816434 | MS.gene40820:CDS | 55.0% | |
GAAGCGATGGGTCAAGGAGT+TGG | + | chr1.2:59814430-59814449 | MS.gene40820:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr1.2:59815807-59815826 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr1.2:59816429-59816448 | MS.gene40820:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr1.2:59814511-59814530 | MS.gene40820:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr1.2:59816378-59816397 | MS.gene40820:CDS | 60.0% | |
GCGATGGGTCAAGGAGTTGG+AGG | + | chr1.2:59814433-59814452 | MS.gene40820:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr1.2:59814438-59814457 | MS.gene40820:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 59813854 | 59816701 | 59813854 | ID=MS.gene40820 |
chr1.2 | mRNA | 59813854 | 59816701 | 59813854 | ID=MS.gene40820.t1;Parent=MS.gene40820 |
chr1.2 | exon | 59813854 | 59814736 | 59813854 | ID=MS.gene40820.t1.exon1;Parent=MS.gene40820.t1 |
chr1.2 | CDS | 59813854 | 59814736 | 59813854 | ID=cds.MS.gene40820.t1;Parent=MS.gene40820.t1 |
chr1.2 | exon | 59815171 | 59815829 | 59815171 | ID=MS.gene40820.t1.exon2;Parent=MS.gene40820.t1 |
chr1.2 | CDS | 59815171 | 59815829 | 59815171 | ID=cds.MS.gene40820.t1;Parent=MS.gene40820.t1 |
chr1.2 | exon | 59815905 | 59816584 | 59815905 | ID=MS.gene40820.t1.exon3;Parent=MS.gene40820.t1 |
chr1.2 | CDS | 59815905 | 59816584 | 59815905 | ID=cds.MS.gene40820.t1;Parent=MS.gene40820.t1 |
chr1.2 | exon | 59816692 | 59816701 | 59816692 | ID=MS.gene40820.t1.exon4;Parent=MS.gene40820.t1 |
chr1.2 | CDS | 59816692 | 59816701 | 59816692 | ID=cds.MS.gene40820.t1;Parent=MS.gene40820.t1 |
Gene Sequence |
Protein sequence |