AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene41152

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41152.t1 MTR_4g064160 93.023 688 39 5 1 681 1 686 0.0 1274
MS.gene41152.t1 MTR_7g062120 48.542 686 320 10 23 681 63 742 0.0 634
MS.gene41152.t1 MTR_2g097410 49.030 722 307 18 8 681 35 743 0.0 629
MS.gene41152.t1 MTR_4g064150 50.000 680 290 18 25 681 83 735 0.0 609
MS.gene41152.t1 MTR_4g064120 48.563 661 280 10 25 681 24 628 0.0 598
MS.gene41152.t1 MTR_4g064180 47.958 661 284 9 25 681 24 628 0.0 593
MS.gene41152.t1 MTR_2g097310 56.768 495 179 7 190 681 178 640 0.0 560
MS.gene41152.t1 MTR_2g097350 60.586 444 162 6 241 681 209 642 0.0 555
MS.gene41152.t1 MTR_2g097467 44.828 667 300 16 28 681 45 656 0.0 538
MS.gene41152.t1 MTR_2g097463 44.257 653 315 10 33 681 50 657 0.0 535
MS.gene41152.t1 MTR_2g097473 45.007 671 293 15 28 681 45 656 0.0 535
MS.gene41152.t1 MTR_4g064200 55.921 456 187 5 236 681 201 652 7.59e-173 509
MS.gene41152.t1 MTR_2g097380 49.412 510 181 10 178 681 125 563 4.31e-160 473
MS.gene41152.t1 MTR_2g082090 32.632 380 253 2 299 678 202 578 7.35e-69 236
MS.gene41152.t1 MTR_5g097480 32.796 372 249 1 307 678 173 543 6.68e-66 227
MS.gene41152.t1 MTR_1g029420 32.973 370 247 1 309 678 223 591 6.38e-64 223
MS.gene41152.t1 MTR_7g027190 33.000 400 238 5 296 678 286 672 1.16e-63 224
MS.gene41152.t1 MTR_4g133660 31.733 375 254 2 306 679 170 543 3.04e-63 219
MS.gene41152.t1 MTR_3g056110 31.207 439 286 8 246 678 113 541 5.38e-63 219
MS.gene41152.t1 MTR_2g026250 31.283 374 255 2 306 678 223 595 6.86e-63 220
MS.gene41152.t1 MTR_3g089055 31.622 370 252 1 309 678 196 564 2.20e-61 215
MS.gene41152.t1 MTR_3g089055 31.622 370 252 1 309 678 201 569 2.77e-61 215
MS.gene41152.t1 MTR_5g094450 32.626 377 247 5 307 678 157 531 3.09e-61 214
MS.gene41152.t1 MTR_4g104020 29.688 384 247 6 308 678 146 519 5.36e-55 196
MS.gene41152.t1 MTR_8g442410 30.000 420 266 9 274 678 118 524 1.06e-54 196
MS.gene41152.t1 MTR_4g076140 28.671 429 237 8 311 678 48 468 8.79e-49 178
MS.gene41152.t1 MTR_3g065980 30.155 388 241 7 306 678 167 539 1.05e-47 177
MS.gene41152.t1 MTR_7g074650 30.601 366 240 5 315 680 442 793 3.13e-47 179
MS.gene41152.t1 MTR_3g022830 27.512 418 244 7 312 678 26 435 2.41e-43 162
MS.gene41152.t1 MTR_4g097080 26.913 379 265 5 309 680 131 504 2.72e-39 152
MS.gene41152.t1 MTR_4g102790 26.753 385 262 9 307 680 288 663 6.05e-39 153
MS.gene41152.t1 MTR_2g089100 27.340 406 254 9 308 681 49 445 6.28e-39 150
MS.gene41152.t1 MTR_2g034250 27.132 387 261 7 306 678 205 584 3.10e-37 147
MS.gene41152.t1 MTR_4g076020 28.495 372 233 8 315 681 88 431 6.02e-37 144
MS.gene41152.t1 MTR_2g034260 25.641 390 262 6 306 678 205 583 1.80e-36 145
MS.gene41152.t1 MTR_7g057230 28.075 374 250 7 312 678 295 656 3.52e-35 142
MS.gene41152.t1 MTR_4g077760 28.496 379 249 9 308 678 190 554 8.83e-34 137
MS.gene41152.t1 MTR_1g069725 28.609 381 244 13 306 679 104 463 4.18e-33 133
MS.gene41152.t1 MTR_2g034280 25.255 392 259 6 306 678 198 574 1.69e-32 133
MS.gene41152.t1 MTR_7g109580 26.772 381 260 8 306 678 184 553 8.93e-32 130
MS.gene41152.t1 MTR_5g015490 26.893 383 262 7 311 680 114 491 1.41e-31 129
MS.gene41152.t1 MTR_5g009080 33.810 210 132 2 311 519 56 259 1.84e-31 129
MS.gene41152.t1 MTR_5g009080 30.201 149 104 0 530 678 329 477 5.32e-20 94.0
MS.gene41152.t1 MTR_1g096030 27.990 393 244 15 311 678 80 458 1.02e-28 120
MS.gene41152.t1 MTR_6g047750 26.702 382 255 9 309 678 293 661 2.91e-27 117
MS.gene41152.t1 MTR_1g086970 25.193 389 263 12 306 678 101 477 2.37e-26 113
MS.gene41152.t1 MTR_3g072710 25.907 386 244 12 320 679 131 500 1.05e-25 112
MS.gene41152.t1 MTR_4g095500 24.882 422 262 12 308 681 56 470 1.26e-24 108
MS.gene41152.t1 MTR_5g015950 24.466 421 267 12 308 681 32 448 2.23e-24 107
MS.gene41152.t1 MTR_3g053270 24.466 421 267 12 308 681 32 448 2.23e-24 107
MS.gene41152.t1 MTR_5g058860 26.238 404 265 13 297 679 106 497 7.30e-24 106
MS.gene41152.t1 MTR_2g099110 26.667 300 206 5 311 605 74 364 8.35e-22 99.4
MS.gene41152.t1 MTR_8g093070 25.316 395 242 18 308 681 136 498 2.17e-17 86.3
MS.gene41152.t1 MTR_0092s0100 22.195 410 279 10 281 678 349 730 2.91e-16 83.2
MS.gene41152.t1 MTR_0092s0100 22.195 410 279 10 281 678 346 727 2.98e-16 83.2
MS.gene41152.t1 MTR_8g020840 23.967 484 293 17 231 678 103 547 2.70e-13 73.6
MS.gene41152.t1 MTR_4g026485 19.417 412 284 11 281 678 246 623 1.53e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41152.t1 AT1G07530 54.825 684 268 10 37 681 86 767 0.0 722
MS.gene41152.t1 AT2G29060 51.437 696 271 16 11 680 39 693 0.0 658
MS.gene41152.t1 AT2G29060 51.105 679 262 16 11 680 39 656 0.0 652
MS.gene41152.t1 AT1G07520 47.059 697 307 19 8 681 39 696 0.0 549
MS.gene41152.t1 AT1G07520 47.059 697 307 19 8 681 38 695 0.0 549
MS.gene41152.t1 AT2G37650 44.248 678 320 13 27 680 59 702 0.0 537
MS.gene41152.t1 AT2G37650 44.248 678 320 13 27 680 71 714 0.0 537
MS.gene41152.t1 AT2G29065 46.515 660 278 16 34 681 34 630 0.0 532
MS.gene41152.t1 AT1G07520 51.526 557 219 16 147 681 4 531 1.51e-177 516
MS.gene41152.t1 AT1G07520 51.526 557 219 16 147 681 4 531 1.51e-177 516
MS.gene41152.t1 AT5G59450 47.009 468 242 4 218 681 135 600 2.94e-152 454
MS.gene41152.t1 AT3G46600 48.546 447 218 5 235 681 115 549 5.24e-146 436
MS.gene41152.t1 AT3G46600 48.546 447 218 4 235 681 147 581 6.37e-146 437
MS.gene41152.t1 AT3G46600 52.406 374 177 1 308 681 1 373 2.34e-140 415
MS.gene41152.t1 AT1G50600 33.602 372 246 1 307 678 155 525 1.04e-66 228
MS.gene41152.t1 AT1G50600 33.602 372 246 1 307 678 226 596 8.25e-66 228
MS.gene41152.t1 AT1G50600 33.602 372 246 1 307 678 230 600 9.61e-66 228
MS.gene41152.t1 AT5G48150 33.512 373 246 2 307 678 118 489 1.11e-64 222
MS.gene41152.t1 AT5G48150 33.512 373 246 2 307 678 118 489 1.11e-64 222
MS.gene41152.t1 AT5G48150 33.512 373 246 2 307 678 118 489 1.11e-64 222
MS.gene41152.t1 AT5G48150 33.512 373 246 2 307 678 118 489 1.11e-64 222
MS.gene41152.t1 AT2G04890 32.527 372 243 2 307 678 49 412 5.67e-64 218
MS.gene41152.t1 AT1G21450 33.514 370 246 0 309 678 223 592 3.14e-63 221
MS.gene41152.t1 AT4G17230 32.533 375 252 1 306 680 153 526 1.30e-54 196
MS.gene41152.t1 AT4G17230 32.533 375 252 1 306 680 153 526 1.30e-54 196
MS.gene41152.t1 AT3G03450 31.398 379 242 9 306 678 178 544 5.40e-51 186
MS.gene41152.t1 AT3G54220 29.730 370 241 6 315 680 297 651 4.55e-49 182
MS.gene41152.t1 AT1G66350 31.915 376 233 10 306 678 150 505 5.47e-49 180
MS.gene41152.t1 AT1G14920 30.688 378 241 8 306 678 167 528 3.44e-47 175
MS.gene41152.t1 AT5G17490 31.347 386 227 11 306 678 155 515 1.84e-46 173
MS.gene41152.t1 AT5G66770 31.436 369 239 8 315 678 224 583 3.40e-45 170
MS.gene41152.t1 AT2G01570 30.343 379 241 10 306 678 219 580 1.03e-43 166
MS.gene41152.t1 AT3G50650 28.771 358 238 6 329 678 193 541 6.26e-37 145
MS.gene41152.t1 AT5G41920 26.873 387 258 7 299 678 31 399 6.87e-37 143
MS.gene41152.t1 AT1G63100 30.114 352 231 8 307 653 273 614 4.57e-36 144
MS.gene41152.t1 AT1G63100 30.114 352 231 8 307 653 248 589 4.71e-36 144
MS.gene41152.t1 AT4G37650 27.110 391 260 8 310 680 145 530 1.36e-35 142
MS.gene41152.t1 AT5G52510 27.224 371 236 11 327 678 284 639 8.82e-32 131
MS.gene41152.t1 AT3G49950 27.720 386 257 11 311 680 30 409 1.34e-30 125
MS.gene41152.t1 AT1G55580 24.941 421 249 11 308 678 41 444 3.72e-29 121
MS.gene41152.t1 AT1G50420 30.189 212 139 2 311 519 57 262 5.93e-29 121
MS.gene41152.t1 AT1G50420 32.215 149 101 0 530 678 330 478 5.26e-21 97.4
MS.gene41152.t1 AT4G08250 24.834 451 305 14 249 678 39 476 3.13e-25 110
MS.gene41152.t1 AT3G13840 22.772 404 265 14 295 678 133 509 1.57e-13 73.9
MS.gene41152.t1 AT4G00150 21.410 383 263 7 304 678 201 553 2.45e-12 70.5
MS.gene41152.t1 AT2G45160 21.270 315 207 8 382 678 347 638 4.47e-11 66.6

Find 167 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATCACACCTTTGGATTTA+TGG 0.102821 4.1:-36354484 MS.gene41152:CDS
ACTCTCCACATTGTAGATTT+TGG 0.171656 4.1:-36353244 MS.gene41152:CDS
AAACAAAATCAACAGGAAAA+TGG 0.197416 4.1:+36354136 None:intergenic
TGTAACCGGTGGTGGATTTA+AGG 0.223081 4.1:-36354058 MS.gene41152:CDS
TCTTCTTCTGTAGCATTGTT+TGG 0.273251 4.1:+36354438 None:intergenic
TTACATTAACCAAATGCTTA+TGG 0.276145 4.1:-36354370 MS.gene41152:CDS
CTTCAAGTCCTCAACTTTGA+TGG 0.287285 4.1:+36353009 None:intergenic
AGTAGTATGTATAAAGATAT+TGG 0.295160 4.1:+36352865 None:intergenic
GGAATACAAGGGCTGGATTT+AGG 0.305548 4.1:-36352619 MS.gene41152:CDS
GTCGGCAGCAGAGTTTCTTT+TGG 0.312934 4.1:+36353369 None:intergenic
TTACTAAGCAAATTTGAATC+AGG 0.323453 4.1:+36354027 None:intergenic
AAAGAAGAAGCAAATAATTC+TGG 0.356533 4.1:-36353640 MS.gene41152:CDS
ACAACCAATGGATTCACTTT+AGG 0.359550 4.1:+36353949 None:intergenic
AGAAGGGTGTTGTGGATCTA+AGG 0.362488 4.1:-36353582 MS.gene41152:CDS
TCAATGCTATTGCACAGAAA+TGG 0.371102 4.1:-36353036 MS.gene41152:CDS
TGATGTTTGAGAAAGAGTTC+TGG 0.377337 4.1:-36352724 MS.gene41152:CDS
CAGCAGGCCTGAAGCCAGGT+TGG 0.380962 4.1:+36353125 None:intergenic
AGCAGGCCTGAAGCCAGGTT+GGG 0.381073 4.1:+36353126 None:intergenic
AAATGGGTTTGCAATATAGA+AGG 0.381555 4.1:+36354153 None:intergenic
TCATAGATGGATCACACCTT+TGG 0.385301 4.1:-36354492 None:intergenic
GATAAGGTGCTGCTTGGAAC+GGG 0.386499 4.1:-36353712 MS.gene41152:CDS
AGTAATAGCAGTAGCGATTT+CGG 0.389012 4.1:-36354081 MS.gene41152:CDS
ATGTATGTTTCATGATTCAT+TGG 0.389528 4.1:-36354325 MS.gene41152:CDS
TGTCTTCTTCCATAAGCATT+TGG 0.390726 4.1:+36354361 None:intergenic
AACAAAATCAACAGGAAAAT+GGG 0.391391 4.1:+36354137 None:intergenic
GCTGAGAGAGTCCAGGAGAC+AGG 0.395527 4.1:-36353106 MS.gene41152:CDS
CTTCTAAAAGAAGGAACAAA+AGG 0.397285 4.1:+36353910 None:intergenic
TCGCTAGATTCAAAATTGTA+TGG 0.404227 4.1:+36353278 None:intergenic
TCTGTAGCATTGTTTGGAGC+TGG 0.404262 4.1:+36354444 None:intergenic
TTTGGAGCTGGTTGAAGAAA+AGG 0.410352 4.1:+36354456 None:intergenic
TTGTGGTGAATTCTGTTTGT+CGG 0.410916 4.1:-36352967 MS.gene41152:CDS
GACAGGCTTCAATATACATT+TGG 0.411821 4.1:+36353332 None:intergenic
AAGGGAGGTTCAGGAGGTAG+TGG 0.418003 4.1:-36353890 MS.gene41152:CDS
TTTATACATACTACTGTCAA+TGG 0.418864 4.1:-36352857 MS.gene41152:CDS
GTCTCCTGGACTCTCTCAGC+AGG 0.421573 4.1:+36353109 None:intergenic
CAATGCTATTGCACAGAAAT+GGG 0.422432 4.1:-36353035 MS.gene41152:CDS
AAGGCAATATTCTTCTCCAT+TGG 0.423667 4.1:-36353485 MS.gene41152:CDS
TGCCATTTCCTGTATGTCTC+TGG 0.427478 4.1:+36352647 None:intergenic
GCAATAGCATTGAACTCAAA+TGG 0.428641 4.1:+36353046 None:intergenic
TTGAACCGTGTCGCAAAGAA+TGG 0.433149 4.1:+36352821 None:intergenic
GTAGTATGTATAAAGATATT+GGG 0.433213 4.1:+36352866 None:intergenic
CTACTGTTAAAACTATCATC+AGG 0.434770 4.1:+36354234 None:intergenic
TTTCAAGCTACTTCAATGAA+TGG 0.435532 4.1:-36354114 MS.gene41152:CDS
GCATCCGTTACGGCTTTCAA+TGG 0.436217 4.1:-36353222 MS.gene41152:CDS
GGCCAGAGACATACAGGAAA+TGG 0.438505 4.1:-36352649 MS.gene41152:CDS
AGAAGAAGAAGATGCACCTT+TGG 0.439763 4.1:-36354424 MS.gene41152:CDS
CCTCCTAAGCTGCTCTTGAC+AGG 0.440626 4.1:-36353160 MS.gene41152:CDS
AATTTACGCTTCCTCCTGTT+GGG 0.441011 4.1:-36352474 MS.gene41152:CDS
CTAGGCGAAGCCCTGTCTCC+TGG 0.442369 4.1:+36353095 None:intergenic
TAATTTCAAAACAGCATCCC+TGG 0.447641 4.1:+36352904 None:intergenic
TTGAGAGGCCAGAGACATAC+AGG 0.447934 4.1:-36352655 MS.gene41152:CDS
TGTTGCCTTGTTTCTTACCT+CGG 0.450630 4.1:+36353605 None:intergenic
TGCAAGCTTCTTGAATGGAC+AGG 0.451062 4.1:+36353315 None:intergenic
TTGGAGCTGGTTGAAGAAAA+GGG 0.451298 4.1:+36354457 None:intergenic
AAATCATTCTATGAAGTCAT+TGG 0.453169 4.1:-36354285 MS.gene41152:CDS
GATGTTTGAGAAAGAGTTCT+GGG 0.455142 4.1:-36352723 MS.gene41152:CDS
AGGCAATATTCTTCTCCATT+GGG 0.457992 4.1:-36353484 MS.gene41152:CDS
ATCCCTGTCAAGAGCAGCTT+AGG 0.460560 4.1:+36353157 None:intergenic
GTCCTATGCAGGTACCCAAC+AGG 0.461795 4.1:+36352460 None:intergenic
AGAAAGGAAGAGAAGGCTAA+TGG 0.462372 4.1:-36353685 MS.gene41152:CDS
ATTCTTTGCGACACGGTTCA+AGG 0.463902 4.1:-36352819 MS.gene41152:CDS
TGGATTTAGGCAACTGCCCT+TGG 0.468940 4.1:-36352606 MS.gene41152:CDS
AGTAGCGATTTCGGTGTAAC+CGG 0.469350 4.1:-36354072 MS.gene41152:CDS
GCAGGCCTGAAGCCAGGTTG+GGG 0.473710 4.1:+36353127 None:intergenic
CATACAGGAAATGGCAGGTT+CGG 0.475319 4.1:-36352640 MS.gene41152:CDS
CTCTCAGCAGGCCTGAAGCC+AGG 0.479427 4.1:+36353121 None:intergenic
TGAACCGTGTCGCAAAGAAT+GGG 0.479940 4.1:+36352822 None:intergenic
ATGAATGCAAGCTTCTTGAA+TGG 0.481139 4.1:+36353310 None:intergenic
TAATTTACGCTTCCTCCTGT+TGG 0.482014 4.1:-36352475 MS.gene41152:CDS
TTCAGGAGGTAGTGGTTGAG+AGG 0.482313 4.1:-36353882 MS.gene41152:CDS
TCAGGGCTTTGTACAGAAGA+AGG 0.485059 4.1:+36354252 None:intergenic
GCTCTAGAAGCACGCATGGC+TGG 0.493848 4.1:-36353424 MS.gene41152:CDS
GAAGCACGCATGGCTGGTAC+TGG 0.498249 4.1:-36353418 MS.gene41152:CDS
CAGGTTCGGAATACAAGGGC+TGG 0.501344 4.1:-36352626 MS.gene41152:CDS
GATTTCGGTGTAACCGGTGG+TGG 0.506809 4.1:-36354066 MS.gene41152:CDS
TCAGGAGGTAGTGGTTGAGA+GGG 0.507729 4.1:-36353881 MS.gene41152:CDS
GATTTCATGCTGGTTGAAGA+TGG 0.507803 4.1:-36352530 MS.gene41152:CDS
AATGGCAGGTTCGGAATACA+AGG 0.511435 4.1:-36352631 MS.gene41152:CDS
CTGCATGCTGCAAGGTTGGA+AGG 0.511778 4.1:-36352504 MS.gene41152:CDS
GATAAACGATAAATAAGGGC+AGG 0.512065 4.1:+36353199 None:intergenic
ATGAGTTATTGAGGCAGATA+AGG 0.512815 4.1:-36353504 MS.gene41152:CDS
CTCTTCAAATCAACAACCAA+TGG 0.512943 4.1:+36353937 None:intergenic
GAAACTGCATGCTGCAAGGT+TGG 0.515284 4.1:-36352508 MS.gene41152:CDS
TTATACATACTACTGTCAAT+GGG 0.515737 4.1:-36352856 MS.gene41152:CDS
CTCCTGTTGGGTACCTGCAT+AGG 0.518592 4.1:-36352462 None:intergenic
GCTATCGGAGCTGTTTGATA+AGG 0.519129 4.1:-36353728 MS.gene41152:CDS
GGGGAGGAAGAATCACGAGC+GGG 0.521175 4.1:-36353821 MS.gene41152:CDS
GAAAGGAAGAGAAGGCTAAT+GGG 0.521362 4.1:-36353684 MS.gene41152:CDS
AAGAAACTCTGCTGCCGACA+TGG 0.522015 4.1:-36353365 MS.gene41152:CDS
AACGTTCACAATACCTTGCT+AGG 0.524003 4.1:+36353077 None:intergenic
CTGAGAGAGTCCAGGAGACA+GGG 0.525021 4.1:-36353105 MS.gene41152:CDS
ATCATTGCCAAGTCCTATGC+AGG 0.526668 4.1:+36352449 None:intergenic
TGATGATGACAGTGAGCTAT+CGG 0.527539 4.1:-36353743 MS.gene41152:CDS
TGAACCTCCCTTCTAAAAGA+AGG 0.528231 4.1:+36353901 None:intergenic
TATTCTTCTCCATTGGGTGA+TGG 0.529010 4.1:-36353478 MS.gene41152:CDS
ATCGTTTATCAAAACGACCT+GGG 0.530234 4.1:-36353186 MS.gene41152:CDS
GAAGCAAATAATTCTGGTGG+TGG 0.534103 4.1:-36353634 MS.gene41152:CDS
TGATAAGGTGCTGCTTGGAA+CGG 0.538662 4.1:-36353713 MS.gene41152:CDS
CAGGCCTGCTGAGAGAGTCC+AGG 0.541243 4.1:-36353113 MS.gene41152:CDS
CTGTTTGATAAGGTGCTGCT+TGG 0.542358 4.1:-36353718 MS.gene41152:CDS
GAGAAATCAATTTCATCCAA+AGG 0.543170 4.1:+36354408 None:intergenic
GCTTGGAACGGGGTGCAGAA+AGG 0.543390 4.1:-36353701 MS.gene41152:CDS
TCTGCCTAAAGTGAATCCAT+TGG 0.544272 4.1:-36353953 MS.gene41152:CDS
GTTAATGAGATGTTTATCCA+AGG 0.545722 4.1:+36352589 None:intergenic
CAGTAGTAGTAATTCTGTTG+AGG 0.547986 4.1:-36354217 MS.gene41152:CDS
CCTGTCAAGAGCAGCTTAGG+AGG 0.549308 4.1:+36353160 None:intergenic
CAGTTGTGTTGAATAGTCCC+AGG 0.555999 4.1:-36352922 MS.gene41152:CDS
GGGTGATGGATCTCAGAGGC+TGG 0.557398 4.1:-36353464 MS.gene41152:CDS
AGCTTGTGAAGGTTCTCAGA+GGG 0.558440 4.1:-36352678 MS.gene41152:CDS
GCAATTTGAGAGGGGTGTGG+AGG 0.561220 4.1:-36353989 MS.gene41152:CDS
ACCGGTGGTGGATTTAAGGA+TGG 0.561936 4.1:-36354054 MS.gene41152:CDS
TTCTAAAAGAAGGAACAAAA+GGG 0.563412 4.1:+36353911 None:intergenic
ATGAATATTATAGCTTGTGA+AGG 0.563558 4.1:-36352689 MS.gene41152:CDS
CAGGCCTGAAGCCAGGTTGG+GGG 0.565732 4.1:+36353128 None:intergenic
TATCGTTTATCAAAACGACC+TGG 0.572065 4.1:-36353187 MS.gene41152:CDS
CTCCTAAGCTGCTCTTGACA+GGG 0.575690 4.1:-36353159 MS.gene41152:CDS
AGGCAACAAGAAGGGTGTTG+TGG 0.575933 4.1:-36353590 MS.gene41152:CDS
TTAATGAGATGTTTATCCAA+GGG 0.577270 4.1:+36352590 None:intergenic
AATTTCAAAACAGCATCCCT+GGG 0.578395 4.1:+36352905 None:intergenic
TGCATGCTGCAAGGTTGGAA+GGG 0.583426 4.1:-36352503 MS.gene41152:CDS
TCGTTTATCAAAACGACCTG+GGG 0.584413 4.1:-36353185 MS.gene41152:CDS
ATGCCCCATTCTTTGCGACA+CGG 0.584723 4.1:-36352826 MS.gene41152:CDS
GGGAGGAAGAATCACGAGCG+GGG 0.584989 4.1:-36353820 MS.gene41152:CDS
AGTCTGTATTGCAATTTGAG+AGG 0.585618 4.1:-36353999 MS.gene41152:CDS
AGACAGGGCTTCGCCTAGCA+AGG 0.589816 4.1:-36353090 MS.gene41152:CDS
TGTTTGAGAAAGAGTTCTGG+GGG 0.594182 4.1:-36352721 MS.gene41152:CDS
ATGGGAAACCATCAAAGTTG+AGG 0.594978 4.1:-36353017 MS.gene41152:CDS
TACTGTTAAAACTATCATCA+GGG 0.596236 4.1:+36354235 None:intergenic
AAGAAACAAGGCAACAAGAA+GGG 0.596770 4.1:-36353598 MS.gene41152:CDS
ATTGCAATTTGAGAGGGGTG+TGG 0.597668 4.1:-36353992 MS.gene41152:CDS
TTGGTACGCTTTCACCATGT+CGG 0.598816 4.1:+36353351 None:intergenic
TCCATCCTTAAATCCACCAC+CGG 0.599728 4.1:+36354053 None:intergenic
CAAATGCTAATGAGTTATTG+AGG 0.600348 4.1:-36353513 MS.gene41152:CDS
GTCTGTATTGCAATTTGAGA+GGG 0.601880 4.1:-36353998 MS.gene41152:CDS
CAGGGCTTTGTACAGAAGAA+GGG 0.601972 4.1:+36354253 None:intergenic
CAGGCCATTGAAAGCCGTAA+CGG 0.602915 4.1:+36353218 None:intergenic
TAAGAAACAAGGCAACAAGA+AGG 0.603179 4.1:-36353599 MS.gene41152:CDS
AATGCTTATGGAAGAAGACA+TGG 0.605099 4.1:-36354358 MS.gene41152:CDS
AGGGTTATCCATAAATCCAA+AGG 0.611812 4.1:+36354476 None:intergenic
AAGGTTCTCAGAGGGTTGAG+AGG 0.614807 4.1:-36352670 MS.gene41152:CDS
AGAGACATACAGGAAATGGC+AGG 0.620307 4.1:-36352645 MS.gene41152:CDS
GAAGAAGCAAATAATTCTGG+TGG 0.623065 4.1:-36353637 MS.gene41152:CDS
GTTAATGTAACGAAGAACAG+TGG 0.624527 4.1:+36354383 None:intergenic
AGCGATTTCGGTGTAACCGG+TGG 0.625322 4.1:-36354069 MS.gene41152:CDS
GAATGCTCTAGAAGCACGCA+TGG 0.632297 4.1:-36353428 MS.gene41152:CDS
AATGAATCATGAAACATACA+TGG 0.637630 4.1:+36354327 None:intergenic
AAGAGCCGAGGTAAGAAACA+AGG 0.639801 4.1:-36353610 MS.gene41152:CDS
GGAAGAGAAGGCTAATGGGT+CGG 0.641207 4.1:-36353680 MS.gene41152:CDS
ATGTTTGAGAAAGAGTTCTG+GGG 0.644129 4.1:-36352722 MS.gene41152:CDS
GTATCATAGTGATTTCATGC+TGG 0.645492 4.1:-36352540 MS.gene41152:CDS
GAACCGTGTCGCAAAGAATG+GGG 0.648096 4.1:+36352823 None:intergenic
GGGGTGCAGAAAGGAAGAGA+AGG 0.651471 4.1:-36353692 MS.gene41152:CDS
CTTTGCGACACGGTTCAAGG+AGG 0.657665 4.1:-36352816 MS.gene41152:CDS
GATGGAAACTGCATGCTGCA+AGG 0.657671 4.1:-36352512 MS.gene41152:CDS
TGTGGATCTAAGGACAATGT+TGG 0.660423 4.1:-36353572 MS.gene41152:CDS
AGTTGTGTTGAATAGTCCCA+GGG 0.661922 4.1:-36352921 MS.gene41152:CDS
CTCTGAGATCCATCACCCAA+TGG 0.662757 4.1:+36353469 None:intergenic
CATTGGGTGATGGATCTCAG+AGG 0.665660 4.1:-36353468 MS.gene41152:CDS
ATAAGGTGCTGCTTGGAACG+GGG 0.670615 4.1:-36353711 MS.gene41152:CDS
TCTGGTGGTGGAAAGAGCCG+AGG 0.679483 4.1:-36353622 MS.gene41152:CDS
GGATGCCAAAATCTACAATG+TGG 0.681308 4.1:+36353239 None:intergenic
TAGCTTGTGAAGGTTCTCAG+AGG 0.684740 4.1:-36352679 MS.gene41152:CDS
CTATGCAGGTACCCAACAGG+AGG 0.684912 4.1:+36352463 None:intergenic
TTGCTCGTGAAGATCAGACA+AGG 0.712099 4.1:-36352748 MS.gene41152:CDS
CGTTTATCAAAACGACCTGG+GGG 0.713845 4.1:-36353184 MS.gene41152:CDS
TCTGTATTGCAATTTGAGAG+GGG 0.714329 4.1:-36353997 MS.gene41152:CDS
ATGGCAGGTTCGGAATACAA+GGG 0.750070 4.1:-36352630 MS.gene41152:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGATAAACGATAAATAA+GGG + chr4.1:36353757-36353776 None:intergenic 15.0%
!! AGTAGTATGTATAAAGATAT+TGG + chr4.1:36354087-36354106 None:intergenic 20.0%
!! GTAGTATGTATAAAGATATT+GGG + chr4.1:36354086-36354105 None:intergenic 20.0%
!!! ATGCTGTTTTGAAATTAATT+AGG - chr4.1:36354051-36354070 MS.gene41152:CDS 20.0%
!!! GTTTTGATAAACGATAAATA+AGG + chr4.1:36353758-36353777 None:intergenic 20.0%
!!! TGCTGTTTTGAAATTAATTA+GGG - chr4.1:36354052-36354071 MS.gene41152:CDS 20.0%
! AAACAAAATCAACAGGAAAA+TGG + chr4.1:36352816-36352835 None:intergenic 25.0%
! AAAGAAAAATGAACTTCTTG+TGG - chr4.1:36353965-36353984 MS.gene41152:CDS 25.0%
! AAAGAAGAAGCAAATAATTC+TGG - chr4.1:36353309-36353328 MS.gene41152:CDS 25.0%
! AAATCATTCTATGAAGTCAT+TGG - chr4.1:36352664-36352683 MS.gene41152:CDS 25.0%
! AACAAAATCAACAGGAAAAT+GGG + chr4.1:36352815-36352834 None:intergenic 25.0%
! AATGAATCATGAAACATACA+TGG + chr4.1:36352625-36352644 None:intergenic 25.0%
! ATGTATGTTTCATGATTCAT+TGG - chr4.1:36352624-36352643 MS.gene41152:CDS 25.0%
! TACTGTTAAAACTATCATCA+GGG + chr4.1:36352717-36352736 None:intergenic 25.0%
! TTAATGAGATGTTTATCCAA+GGG + chr4.1:36354362-36354381 None:intergenic 25.0%
! TTACATTAACCAAATGCTTA+TGG - chr4.1:36352579-36352598 MS.gene41152:CDS 25.0%
! TTACTAAGCAAATTTGAATC+AGG + chr4.1:36352925-36352944 None:intergenic 25.0%
! TTATACATACTACTGTCAAT+GGG - chr4.1:36354093-36354112 MS.gene41152:CDS 25.0%
! TTTATACATACTACTGTCAA+TGG - chr4.1:36354092-36354111 MS.gene41152:CDS 25.0%
!! ATGAATATTATAGCTTGTGA+AGG - chr4.1:36354260-36354279 MS.gene41152:CDS 25.0%
!! TTCTAAAAGAAGGAACAAAA+GGG + chr4.1:36353041-36353060 None:intergenic 25.0%
!!! TTTTGTTCCTTCTTTTAGAA+GGG - chr4.1:36353041-36353060 MS.gene41152:CDS 25.0%
CAAATGCTAATGAGTTATTG+AGG - chr4.1:36353436-36353455 MS.gene41152:CDS 30.0%
CTACTGTTAAAACTATCATC+AGG + chr4.1:36352718-36352737 None:intergenic 30.0%
GAGAAATCAATTTCATCCAA+AGG + chr4.1:36352544-36352563 None:intergenic 30.0%
GCTTGAAAAACAAAATCAAC+AGG + chr4.1:36352823-36352842 None:intergenic 30.0%
GTTAATGAGATGTTTATCCA+AGG + chr4.1:36354363-36354382 None:intergenic 30.0%
TCGCTAGATTCAAAATTGTA+TGG + chr4.1:36353674-36353693 None:intergenic 30.0%
TTTCAAGCTACTTCAATGAA+TGG - chr4.1:36352835-36352854 MS.gene41152:CDS 30.0%
! AAATGGGTTTGCAATATAGA+AGG + chr4.1:36352799-36352818 None:intergenic 30.0%
! CTTCTAAAAGAAGGAACAAA+AGG + chr4.1:36353042-36353061 None:intergenic 30.0%
! CTTTTGTTCCTTCTTTTAGA+AGG - chr4.1:36353040-36353059 MS.gene41152:CDS 30.0%
! TACAATTTTGAATCTAGCGA+AGG - chr4.1:36353674-36353693 MS.gene41152:CDS 30.0%
AAGAAACAAGGCAACAAGAA+GGG - chr4.1:36353351-36353370 MS.gene41152:CDS 35.0%
AAGGCAATATTCTTCTCCAT+TGG - chr4.1:36353464-36353483 MS.gene41152:CDS 35.0%
AATGCTTATGGAAGAAGACA+TGG - chr4.1:36352591-36352610 MS.gene41152:CDS 35.0%
AATTTCAAAACAGCATCCCT+GGG + chr4.1:36354047-36354066 None:intergenic 35.0%
AGGCAATATTCTTCTCCATT+GGG - chr4.1:36353465-36353484 MS.gene41152:CDS 35.0%
AGGGTTATCCATAAATCCAA+AGG + chr4.1:36352476-36352495 None:intergenic 35.0%
AGTAATAGCAGTAGCGATTT+CGG - chr4.1:36352868-36352887 MS.gene41152:CDS 35.0%
AGTCTGTATTGCAATTTGAG+AGG - chr4.1:36352950-36352969 MS.gene41152:CDS 35.0%
ATCGTTTATCAAAACGACCT+GGG - chr4.1:36353763-36353782 MS.gene41152:CDS 35.0%
ATGAATGCAAGCTTCTTGAA+TGG + chr4.1:36353642-36353661 None:intergenic 35.0%
ATGAGTTATTGAGGCAGATA+AGG - chr4.1:36353445-36353464 MS.gene41152:CDS 35.0%
ATGTTTGAGAAAGAGTTCTG+GGG - chr4.1:36354227-36354246 MS.gene41152:CDS 35.0%
CAATGCTATTGCACAGAAAT+GGG - chr4.1:36353914-36353933 MS.gene41152:CDS 35.0%
CAGTAGTAGTAATTCTGTTG+AGG - chr4.1:36352732-36352751 MS.gene41152:CDS 35.0%
CTCTTCAAATCAACAACCAA+TGG + chr4.1:36353015-36353034 None:intergenic 35.0%
GAAGAAGCAAATAATTCTGG+TGG - chr4.1:36353312-36353331 MS.gene41152:CDS 35.0%
GACAGGCTTCAATATACATT+TGG + chr4.1:36353620-36353639 None:intergenic 35.0%
GATAAACGATAAATAAGGGC+AGG + chr4.1:36353753-36353772 None:intergenic 35.0%
GATGTTTGAGAAAGAGTTCT+GGG - chr4.1:36354226-36354245 MS.gene41152:CDS 35.0%
GTATCATAGTGATTTCATGC+TGG - chr4.1:36354409-36354428 MS.gene41152:CDS 35.0%
GTCTGTATTGCAATTTGAGA+GGG - chr4.1:36352951-36352970 MS.gene41152:CDS 35.0%
GTTAATGTAACGAAGAACAG+TGG + chr4.1:36352569-36352588 None:intergenic 35.0%
TAAGAAACAAGGCAACAAGA+AGG - chr4.1:36353350-36353369 MS.gene41152:CDS 35.0%
TAATTTCAAAACAGCATCCC+TGG + chr4.1:36354048-36354067 None:intergenic 35.0%
TATCGTTTATCAAAACGACC+TGG - chr4.1:36353762-36353781 MS.gene41152:CDS 35.0%
TCAATGCTATTGCACAGAAA+TGG - chr4.1:36353913-36353932 MS.gene41152:CDS 35.0%
TCTGTATTGCAATTTGAGAG+GGG - chr4.1:36352952-36352971 MS.gene41152:CDS 35.0%
TCTTCTTCTGTAGCATTGTT+TGG + chr4.1:36352514-36352533 None:intergenic 35.0%
TGATGTTTGAGAAAGAGTTC+TGG - chr4.1:36354225-36354244 MS.gene41152:CDS 35.0%
TGTCTTCTTCCATAAGCATT+TGG + chr4.1:36352591-36352610 None:intergenic 35.0%
TTGTGGTGAATTCTGTTTGT+CGG - chr4.1:36353982-36354001 MS.gene41152:CDS 35.0%
! ACAACCAATGGATTCACTTT+AGG + chr4.1:36353003-36353022 None:intergenic 35.0%
! ACTCTCCACATTGTAGATTT+TGG - chr4.1:36353705-36353724 MS.gene41152:CDS 35.0%
! GCAATAGCATTGAACTCAAA+TGG + chr4.1:36353906-36353925 None:intergenic 35.0%
AACGTTCACAATACCTTGCT+AGG + chr4.1:36353875-36353894 None:intergenic 40.0%
AATTTACGCTTCCTCCTGTT+GGG - chr4.1:36354475-36354494 MS.gene41152:CDS 40.0%
AGAAAGGAAGAGAAGGCTAA+TGG - chr4.1:36353264-36353283 MS.gene41152:CDS 40.0%
AGAAGAAGAAGATGCACCTT+TGG - chr4.1:36352525-36352544 MS.gene41152:CDS 40.0%
AGTTGTGTTGAATAGTCCCA+GGG - chr4.1:36354028-36354047 MS.gene41152:CDS 40.0%
ATGGGAAACCATCAAAGTTG+AGG - chr4.1:36353932-36353951 MS.gene41152:CDS 40.0%
CTTCAAGTCCTCAACTTTGA+TGG + chr4.1:36353943-36353962 None:intergenic 40.0%
GAAAGGAAGAGAAGGCTAAT+GGG - chr4.1:36353265-36353284 MS.gene41152:CDS 40.0%
GAAGCAAATAATTCTGGTGG+TGG - chr4.1:36353315-36353334 MS.gene41152:CDS 40.0%
GGATCACACCTTTGGATTTA+TGG - chr4.1:36352465-36352484 MS.gene41152:CDS 40.0%
GGATGCCAAAATCTACAATG+TGG + chr4.1:36353713-36353732 None:intergenic 40.0%
TAATTTACGCTTCCTCCTGT+TGG - chr4.1:36354474-36354493 MS.gene41152:CDS 40.0%
TATTCTTCTCCATTGGGTGA+TGG - chr4.1:36353471-36353490 MS.gene41152:CDS 40.0%
TCGTTTATCAAAACGACCTG+GGG - chr4.1:36353764-36353783 MS.gene41152:CDS 40.0%
TCTGCCTAAAGTGAATCCAT+TGG - chr4.1:36352996-36353015 MS.gene41152:CDS 40.0%
TGTGGATCTAAGGACAATGT+TGG - chr4.1:36353377-36353396 MS.gene41152:CDS 40.0%
TTGGAGCTGGTTGAAGAAAA+GGG + chr4.1:36352495-36352514 None:intergenic 40.0%
! GATTTCATGCTGGTTGAAGA+TGG - chr4.1:36354419-36354438 MS.gene41152:CDS 40.0%
! TGAACCTCCCTTCTAAAAGA+AGG + chr4.1:36353051-36353070 None:intergenic 40.0%
! TGATGATGACAGTGAGCTAT+CGG - chr4.1:36353206-36353225 MS.gene41152:CDS 40.0%
! TGTTTGAGAAAGAGTTCTGG+GGG - chr4.1:36354228-36354247 MS.gene41152:CDS 40.0%
! TTTGGAGCTGGTTGAAGAAA+AGG + chr4.1:36352496-36352515 None:intergenic 40.0%
!! GTAGATTTTGGCATCCGTTA+CGG - chr4.1:36353717-36353736 MS.gene41152:CDS 40.0%
!! TGTTCCTTCTTTTAGAAGGG+AGG - chr4.1:36353044-36353063 MS.gene41152:CDS 40.0%
!! TGTTGCCTTGTTTCTTACCT+CGG + chr4.1:36353347-36353366 None:intergenic 40.0%
!! TTCTTTTAGAAGGGAGGTTC+AGG - chr4.1:36353050-36353069 MS.gene41152:CDS 40.0%
AAGAGCCGAGGTAAGAAACA+AGG - chr4.1:36353339-36353358 MS.gene41152:CDS 45.0%
AATGGCAGGTTCGGAATACA+AGG - chr4.1:36354318-36354337 MS.gene41152:CDS 45.0%
AGAGACATACAGGAAATGGC+AGG - chr4.1:36354304-36354323 MS.gene41152:CDS 45.0%
AGCTTGTGAAGGTTCTCAGA+GGG - chr4.1:36354271-36354290 MS.gene41152:CDS 45.0%
ATGGCAGGTTCGGAATACAA+GGG - chr4.1:36354319-36354338 MS.gene41152:CDS 45.0%
ATTCTTTGCGACACGGTTCA+AGG - chr4.1:36354130-36354149 MS.gene41152:CDS 45.0%
ATTGCAATTTGAGAGGGGTG+TGG - chr4.1:36352957-36352976 MS.gene41152:CDS 45.0%
CAGTTGTGTTGAATAGTCCC+AGG - chr4.1:36354027-36354046 MS.gene41152:CDS 45.0%
CATACAGGAAATGGCAGGTT+CGG - chr4.1:36354309-36354328 MS.gene41152:CDS 45.0%
CGTTTATCAAAACGACCTGG+GGG - chr4.1:36353765-36353784 MS.gene41152:CDS 45.0%
GCTATCGGAGCTGTTTGATA+AGG - chr4.1:36353221-36353240 MS.gene41152:CDS 45.0%
GGAATACAAGGGCTGGATTT+AGG - chr4.1:36354330-36354349 MS.gene41152:CDS 45.0%
TCCATCCTTAAATCCACCAC+CGG + chr4.1:36352899-36352918 None:intergenic 45.0%
TGAACCGTGTCGCAAAGAAT+GGG + chr4.1:36354130-36354149 None:intergenic 45.0%
TGCAAGCTTCTTGAATGGAC+AGG + chr4.1:36353637-36353656 None:intergenic 45.0%
TTGAACCGTGTCGCAAAGAA+TGG + chr4.1:36354131-36354150 None:intergenic 45.0%
TTGCTCGTGAAGATCAGACA+AGG - chr4.1:36354201-36354220 MS.gene41152:CDS 45.0%
TTGGTACGCTTTCACCATGT+CGG + chr4.1:36353601-36353620 None:intergenic 45.0%
! AGTAGCGATTTCGGTGTAAC+CGG - chr4.1:36352877-36352896 MS.gene41152:CDS 45.0%
! CAGGGCTTTGTACAGAAGAA+GGG + chr4.1:36352699-36352718 None:intergenic 45.0%
! TAGCTTGTGAAGGTTCTCAG+AGG - chr4.1:36354270-36354289 MS.gene41152:CDS 45.0%
! TCAGGGCTTTGTACAGAAGA+AGG + chr4.1:36352700-36352719 None:intergenic 45.0%
! TCTGTAGCATTGTTTGGAGC+TGG + chr4.1:36352508-36352527 None:intergenic 45.0%
! TGCCATTTCCTGTATGTCTC+TGG + chr4.1:36354305-36354324 None:intergenic 45.0%
!! AACGTTTTTCAGCTGAGTCG+AGG - chr4.1:36353106-36353125 MS.gene41152:CDS 45.0%
!! ACGTTTTTCAGCTGAGTCGA+GGG - chr4.1:36353107-36353126 MS.gene41152:CDS 45.0%
!! AGAAGGGTGTTGTGGATCTA+AGG - chr4.1:36353367-36353386 MS.gene41152:CDS 45.0%
!! CTGTTTGATAAGGTGCTGCT+TGG - chr4.1:36353231-36353250 MS.gene41152:CDS 45.0%
!! TGATAAGGTGCTGCTTGGAA+CGG - chr4.1:36353236-36353255 MS.gene41152:CDS 45.0%
!! TGTAACCGGTGGTGGATTTA+AGG - chr4.1:36352891-36352910 MS.gene41152:CDS 45.0%
!! TTTTAGAAGGGAGGTTCAGG+AGG - chr4.1:36353053-36353072 MS.gene41152:CDS 45.0%
AAGAAACTCTGCTGCCGACA+TGG - chr4.1:36353584-36353603 MS.gene41152:CDS 50.0%
AAGGTTCTCAGAGGGTTGAG+AGG - chr4.1:36354279-36354298 MS.gene41152:CDS 50.0%
ATCCCTGTCAAGAGCAGCTT+AGG + chr4.1:36353795-36353814 None:intergenic 50.0%
ATGCCCCATTCTTTGCGACA+CGG - chr4.1:36354123-36354142 MS.gene41152:CDS 50.0%
CAGGCCATTGAAAGCCGTAA+CGG + chr4.1:36353734-36353753 None:intergenic 50.0%
CTCCTAAGCTGCTCTTGACA+GGG - chr4.1:36353790-36353809 MS.gene41152:CDS 50.0%
GAAACTGCATGCTGCAAGGT+TGG - chr4.1:36354441-36354460 MS.gene41152:CDS 50.0%
GAACCGTGTCGCAAAGAATG+GGG + chr4.1:36354129-36354148 None:intergenic 50.0%
GATGGAAACTGCATGCTGCA+AGG - chr4.1:36354437-36354456 MS.gene41152:CDS 50.0%
GCATCCGTTACGGCTTTCAA+TGG - chr4.1:36353727-36353746 MS.gene41152:CDS 50.0%
GGCCAGAGACATACAGGAAA+TGG - chr4.1:36354300-36354319 MS.gene41152:CDS 50.0%
TGCATGCTGCAAGGTTGGAA+GGG - chr4.1:36354446-36354465 MS.gene41152:CDS 50.0%
TGGATTTAGGCAACTGCCCT+TGG - chr4.1:36354343-36354362 MS.gene41152:CDS 50.0%
TTGAGAGGCCAGAGACATAC+AGG - chr4.1:36354294-36354313 MS.gene41152:CDS 50.0%
! GGAAGAGAAGGCTAATGGGT+CGG - chr4.1:36353269-36353288 MS.gene41152:CDS 50.0%
! GTCGGCAGCAGAGTTTCTTT+TGG + chr4.1:36353583-36353602 None:intergenic 50.0%
! TCAGGAGGTAGTGGTTGAGA+GGG - chr4.1:36353068-36353087 MS.gene41152:CDS 50.0%
! TTCAGGAGGTAGTGGTTGAG+AGG - chr4.1:36353067-36353086 MS.gene41152:CDS 50.0%
!! ACCGGTGGTGGATTTAAGGA+TGG - chr4.1:36352895-36352914 MS.gene41152:CDS 50.0%
!! AGGCAACAAGAAGGGTGTTG+TGG - chr4.1:36353359-36353378 MS.gene41152:CDS 50.0%
!! ATAAGGTGCTGCTTGGAACG+GGG - chr4.1:36353238-36353257 MS.gene41152:CDS 50.0%
!! CATTGGGTGATGGATCTCAG+AGG - chr4.1:36353481-36353500 MS.gene41152:CDS 50.0%
!! CGTTTTTCAGCTGAGTCGAG+GGG - chr4.1:36353108-36353127 MS.gene41152:CDS 50.0%
!! CTCTGAGATCCATCACCCAA+TGG + chr4.1:36353483-36353502 None:intergenic 50.0%
!! GAATGCTCTAGAAGCACGCA+TGG - chr4.1:36353521-36353540 MS.gene41152:CDS 50.0%
!! GATAAGGTGCTGCTTGGAAC+GGG - chr4.1:36353237-36353256 MS.gene41152:CDS 50.0%
!! GTTTTTCAGCTGAGTCGAGG+GGG - chr4.1:36353109-36353128 MS.gene41152:CDS 50.0%
!! TGAGAAAGAGTTCTGGGGGA+GGG - chr4.1:36354232-36354251 MS.gene41152:CDS 50.0%
!! TTGAGAAAGAGTTCTGGGGG+AGG - chr4.1:36354231-36354250 MS.gene41152:CDS 50.0%
AAGGGAGGTTCAGGAGGTAG+TGG - chr4.1:36353059-36353078 MS.gene41152:CDS 55.0%
CAGGTTCGGAATACAAGGGC+TGG - chr4.1:36354323-36354342 MS.gene41152:CDS 55.0%
CCTCCTAAGCTGCTCTTGAC+AGG - chr4.1:36353789-36353808 MS.gene41152:CDS 55.0%
CCTGTCAAGAGCAGCTTAGG+AGG + chr4.1:36353792-36353811 None:intergenic 55.0%
CTATGCAGGTACCCAACAGG+AGG + chr4.1:36354489-36354508 None:intergenic 55.0%
CTGAGAGAGTCCAGGAGACA+GGG - chr4.1:36353844-36353863 MS.gene41152:CDS 55.0%
CTGCATGCTGCAAGGTTGGA+AGG - chr4.1:36354445-36354464 MS.gene41152:CDS 55.0%
CTTTGCGACACGGTTCAAGG+AGG - chr4.1:36354133-36354152 MS.gene41152:CDS 55.0%
GGGGTGCAGAAAGGAAGAGA+AGG - chr4.1:36353257-36353276 MS.gene41152:CDS 55.0%
! AGCGATTTCGGTGTAACCGG+TGG - chr4.1:36352880-36352899 MS.gene41152:CDS 55.0%
! GATTTCGGTGTAACCGGTGG+TGG - chr4.1:36352883-36352902 MS.gene41152:CDS 55.0%
! GCAATTTGAGAGGGGTGTGG+AGG - chr4.1:36352960-36352979 MS.gene41152:CDS 55.0%
AACTCCCCCAACCTGGCTTC+AGG - chr4.1:36353817-36353836 MS.gene41152:CDS 60.0%
AGACAGGGCTTCGCCTAGCA+AGG - chr4.1:36353859-36353878 MS.gene41152:CDS 60.0%
AGCAGGCCTGAAGCCAGGTT+GGG + chr4.1:36353826-36353845 None:intergenic 60.0%
GAAGCACGCATGGCTGGTAC+TGG - chr4.1:36353531-36353550 MS.gene41152:CDS 60.0%
GCTGAGAGAGTCCAGGAGAC+AGG - chr4.1:36353843-36353862 MS.gene41152:CDS 60.0%
GCTTGGAACGGGGTGCAGAA+AGG - chr4.1:36353248-36353267 MS.gene41152:CDS 60.0%
GGGAGGAAGAATCACGAGCG+GGG - chr4.1:36353129-36353148 MS.gene41152:CDS 60.0%
GGGATAGAACTCCCCCAACC+TGG - chr4.1:36353810-36353829 MS.gene41152:CDS 60.0%
GGGGAGGAAGAATCACGAGC+GGG - chr4.1:36353128-36353147 MS.gene41152:CDS 60.0%
GGGGGAGGAAGAATCACGAG+CGG - chr4.1:36353127-36353146 MS.gene41152:CDS 60.0%
GTCTCCTGGACTCTCTCAGC+AGG + chr4.1:36353843-36353862 None:intergenic 60.0%
TTTCAGCTGAGTCGAGGGGG+AGG - chr4.1:36353112-36353131 MS.gene41152:CDS 60.0%
!! GCTCTAGAAGCACGCATGGC+TGG - chr4.1:36353525-36353544 MS.gene41152:CDS 60.0%
!! GGGTGATGGATCTCAGAGGC+TGG - chr4.1:36353485-36353504 MS.gene41152:CDS 60.0%
!! TCTGGTGGTGGAAAGAGCCG+AGG - chr4.1:36353327-36353346 MS.gene41152:CDS 60.0%
AGCAGCTTAGGAGGTCCCCC+AGG + chr4.1:36353783-36353802 None:intergenic 65.0%
CAGCAGGCCTGAAGCCAGGT+TGG + chr4.1:36353827-36353846 None:intergenic 65.0%
CAGGCCTGCTGAGAGAGTCC+AGG - chr4.1:36353836-36353855 MS.gene41152:CDS 65.0%
CTAGGCGAAGCCCTGTCTCC+TGG + chr4.1:36353857-36353876 None:intergenic 65.0%
CTCTCAGCAGGCCTGAAGCC+AGG + chr4.1:36353831-36353850 None:intergenic 65.0%
GCAGGCCTGAAGCCAGGTTG+GGG + chr4.1:36353825-36353844 None:intergenic 65.0%
! CAGGCCTGAAGCCAGGTTGG+GGG + chr4.1:36353824-36353843 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 36352463 36354508 36352463 ID=MS.gene41152
chr4.1 mRNA 36352463 36354508 36352463 ID=MS.gene41152.t1;Parent=MS.gene41152
chr4.1 exon 36352463 36354508 36352463 ID=MS.gene41152.t1.exon1;Parent=MS.gene41152.t1
chr4.1 CDS 36352463 36354508 36352463 ID=cds.MS.gene41152.t1;Parent=MS.gene41152.t1
Gene Sequence

>MS.gene41152

ATGGATCACACCTTTGGATTTATGGATAACCCTTTTCTTCAACCAGCTCCAAACAATGCTACAGAAGAAGAAGATGCACCTTTGGATGAAATTGATTTCTCTTCCACTGTTCTTCGTTACATTAACCAAATGCTTATGGAAGAAGACATGGATATGAAACCATGTATGTTTCATGATTCATTGGCTTTACAAGCTGCTGAAAAATCATTCTATGAAGTCATTGGTGAGACTTACCCTTCTTCTGTACAAAGCCCTGATGATAGTTTTAACAGTAGTAGTAATTCTGTTGAGGTTGAATCATATTTGAGTAATTTTGATGTTTCTGAGCATAATCCTTCTATATTGCAAACCCATTTTCCTGTTGATTTTGTTTTTCAAGCTACTTCAATGAATGGTAGTAGTAGTAGTAATAGCAGTAGCGATTTCGGTGTAACCGGTGGTGGATTTAAGGATGGATTTCCTGATTCAAATTTGCTTAGTAAGAATGAGTCTGTATTGCAATTTGAGAGGGGTGTGGAGGAAGCTAATAAGTTTCTGCCTAAAGTGAATCCATTGGTTGTTGATTTGAAGAGTAACCCTTTTGTTCCTTCTTTTAGAAGGGAGGTTCAGGAGGTAGTGGTTGAGAGGGAGAGCAATGAAAGAGAACGTTTTTCAGCTGAGTCGAGGGGGAGGAAGAATCACGAGCGGGGAGATGAATTGAGTTTACAAGATGAGAGAAGTAACAAACAATCAGCTGTTTATACTGATGATGACAGTGAGCTATCGGAGCTGTTTGATAAGGTGCTGCTTGGAACGGGGTGCAGAAAGGAAGAGAAGGCTAATGGGTCGGATACGAGCGTGCAGCAGAAAGAAGAAGCAAATAATTCTGGTGGTGGAAAGAGCCGAGGTAAGAAACAAGGCAACAAGAAGGGTGTTGTGGATCTAAGGACAATGTTGGTTCTATGTGCACAATATGTTTCTTCTGATGATCGTGCAAATGCTAATGAGTTATTGAGGCAGATAAGGCAATATTCTTCTCCATTGGGTGATGGATCTCAGAGGCTGGCACATTGCTTTGCGAATGCTCTAGAAGCACGCATGGCTGGTACTGGCACTCAGATTTATACTGCTTTATACTCCAAAAGAAACTCTGCTGCCGACATGGTGAAAGCGTACCAAATGTATATTGAAGCCTGTCCATTCAAGAAGCTTGCATTCATTTTCGCGAACCATACAATTTTGAATCTAGCGAAGGAAGTAGAAACTCTCCACATTGTAGATTTTGGCATCCGTTACGGCTTTCAATGGCCTGCCCTTATTTATCGTTTATCAAAACGACCTGGGGGACCTCCTAAGCTGCTCTTGACAGGGATAGAACTCCCCCAACCTGGCTTCAGGCCTGCTGAGAGAGTCCAGGAGACAGGGCTTCGCCTAGCAAGGTATTGTGAACGTTTTAATGTTCCATTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCATCAAAGTTGAGGACTTGAAGATAAAGAAAAATGAACTTCTTGTGGTGAATTCTGTTTGTCGGCTTAAAAATTTACTTGACGAGACAGTTGTGTTGAATAGTCCCAGGGATGCTGTTTTGAAATTAATTAGGGACGCAAATCCCAATATCTTTATACATACTACTGTCAATGGGAGCTACAATGCCCCATTCTTTGCGACACGGTTCAAGGAGGCTCTTTTCAATTACTCTACAATGTTTGATGTGCTTGACATCAATGTTGCTCGTGAAGATCAGACAAGGTTGATGTTTGAGAAAGAGTTCTGGGGGAGGGAAGTAATGAATATTATAGCTTGTGAAGGTTCTCAGAGGGTTGAGAGGCCAGAGACATACAGGAAATGGCAGGTTCGGAATACAAGGGCTGGATTTAGGCAACTGCCCTTGGATAAACATCTCATTAACAAGTTAAGATGCAAGTTGAAAGATGTGTATCATAGTGATTTCATGCTGGTTGAAGATGGAAACTGCATGCTGCAAGGTTGGAAGGGTCGAATAATTTACGCTTCCTCCTGTTGGGTACCTGCATAG
Protein sequence

>MS.gene41152.t1

MDHTFGFMDNPFLQPAPNNATEEEDAPLDEIDFSSTVLRYINQMLMEEDMDMKPCMFHDSLALQAAEKSFYEVIGETYPSSVQSPDDSFNSSSNSVEVESYLSNFDVSEHNPSILQTHFPVDFVFQATSMNGSSSSNSSSDFGVTGGGFKDGFPDSNLLSKNESVLQFERGVEEANKFLPKVNPLVVDLKSNPFVPSFRREVQEVVVERESNERERFSAESRGRKNHERGDELSLQDERSNKQSAVYTDDDSELSELFDKVLLGTGCRKEEKANGSDTSVQQKEEANNSGGGKSRGKKQGNKKGVVDLRTMLVLCAQYVSSDDRANANELLRQIRQYSSPLGDGSQRLAHCFANALEARMAGTGTQIYTALYSKRNSAADMVKAYQMYIEACPFKKLAFIFANHTILNLAKEVETLHIVDFGIRYGFQWPALIYRLSKRPGGPPKLLLTGIELPQPGFRPAERVQETGLRLARYCERFNVPFEFNAIAQKWETIKVEDLKIKKNELLVVNSVCRLKNLLDETVVLNSPRDAVLKLIRDANPNIFIHTTVNGSYNAPFFATRFKEALFNYSTMFDVLDINVAREDQTRLMFEKEFWGREVMNIIACEGSQRVERPETYRKWQVRNTRAGFRQLPLDKHLINKLRCKLKDVYHSDFMLVEDGNCMLQGWKGRIIYASSCWVPA