Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41439.t1 | XP_024634048.1 | 93.6 | 596 | 37 | 1 | 1 | 596 | 1 | 595 | 0.00E+00 | 1085.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41439.t1 | Q9SZD1 | 38.5 | 590 | 281 | 18 | 13 | 571 | 24 | 562 | 3.4e-85 | 317.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41439.t1 | A0A072V2F6 | 89.5 | 598 | 59 | 4 | 1 | 596 | 1 | 596 | 5.0e-295 | 1022.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene41439.t1 | TF | CPP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41439.t1 | MTR_3g110122 | 91.973 | 598 | 44 | 4 | 1 | 596 | 1 | 596 | 0.0 | 1096 |
| MS.gene41439.t1 | MTR_6g087590 | 45.376 | 465 | 225 | 10 | 125 | 570 | 107 | 561 | 1.12e-116 | 360 |
| MS.gene41439.t1 | MTR_8g103320 | 45.227 | 440 | 215 | 11 | 109 | 530 | 44 | 475 | 2.83e-111 | 342 |
| MS.gene41439.t1 | MTR_1g012020 | 44.604 | 139 | 73 | 4 | 148 | 282 | 498 | 636 | 1.50e-28 | 121 |
| MS.gene41439.t1 | MTR_5g006530 | 48.800 | 125 | 60 | 4 | 148 | 269 | 488 | 611 | 5.80e-27 | 116 |
| MS.gene41439.t1 | MTR_5g006530 | 48.800 | 125 | 60 | 4 | 148 | 269 | 264 | 387 | 8.07e-27 | 115 |
| MS.gene41439.t1 | MTR_1g103230 | 41.739 | 115 | 63 | 4 | 156 | 267 | 446 | 559 | 7.51e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41439.t1 | AT4G29000 | 40.433 | 554 | 243 | 18 | 13 | 533 | 24 | 523 | 4.10e-112 | 348 |
| MS.gene41439.t1 | AT2G20110 | 40.883 | 521 | 247 | 14 | 84 | 590 | 66 | 539 | 1.53e-105 | 329 |
| MS.gene41439.t1 | AT2G20110 | 41.352 | 503 | 240 | 13 | 84 | 572 | 66 | 527 | 9.77e-105 | 328 |
| MS.gene41439.t1 | AT2G20110 | 40.588 | 510 | 241 | 13 | 84 | 572 | 66 | 534 | 8.83e-103 | 323 |
| MS.gene41439.t1 | AT5G25790 | 36.722 | 482 | 248 | 15 | 49 | 524 | 11 | 441 | 1.03e-82 | 267 |
| MS.gene41439.t1 | AT5G25790 | 35.714 | 504 | 267 | 15 | 49 | 546 | 11 | 463 | 1.85e-82 | 268 |
| MS.gene41439.t1 | AT5G25790 | 36.515 | 482 | 245 | 16 | 49 | 524 | 11 | 437 | 3.97e-82 | 265 |
| MS.gene41439.t1 | AT3G16160 | 44.737 | 152 | 80 | 2 | 116 | 266 | 34 | 182 | 3.11e-32 | 128 |
| MS.gene41439.t1 | AT3G22760 | 41.401 | 157 | 87 | 3 | 126 | 280 | 186 | 339 | 1.50e-28 | 119 |
| MS.gene41439.t1 | AT3G22760 | 41.401 | 157 | 87 | 3 | 126 | 280 | 309 | 462 | 2.25e-28 | 120 |
| MS.gene41439.t1 | AT4G14770 | 46.774 | 124 | 64 | 2 | 148 | 269 | 375 | 498 | 4.72e-28 | 119 |
| MS.gene41439.t1 | AT4G14770 | 46.774 | 124 | 64 | 2 | 148 | 269 | 355 | 478 | 7.06e-28 | 119 |
| MS.gene41439.t1 | AT4G14770 | 46.774 | 124 | 64 | 2 | 148 | 269 | 356 | 479 | 7.09e-28 | 119 |
| MS.gene41439.t1 | AT3G22780 | 42.029 | 138 | 78 | 2 | 148 | 283 | 401 | 538 | 1.03e-27 | 119 |
| MS.gene41439.t1 | AT3G04850 | 45.968 | 124 | 65 | 2 | 148 | 269 | 453 | 576 | 5.40e-27 | 116 |
Find 0 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGAATATAAAAAAAAAC+CGG | - | 21206:6659-6678 | MS.gene41439:intron | 10.0% |
| !! | TAAAAGATATTAATTACAAT+CGG | + | 21206:6474-6493 | MS.gene41439:intergenic | 10.0% |
| !! | TTATAAAAACTAATAAGATT+TGG | + | 21206:5089-5108 | MS.gene41439:intergenic | 10.0% |
| !!! | ATCTTATTAGTTTTTATAAA+AGG | - | 21206:5090-5109 | MS.gene41439:intron | 10.0% |
| !!! | CTCTTTAAAATTTATAATTT+AGG | + | 21206:8481-8500 | MS.gene41439:intergenic | 10.0% |
| !! | GACGATTAAATTAATAAAAA+TGG | - | 21206:8645-8664 | MS.gene41439:intron | 15.0% |
| !! | TATTAATTTAATCGTCATTA+AGG | + | 21206:8641-8660 | MS.gene41439:intergenic | 15.0% |
| !!! | AAAAAATTAAAGCTACTTTT+AGG | + | 21206:8849-8868 | MS.gene41439:intergenic | 15.0% |
| !!! | AAAAATTAAAGCTACTTTTA+GGG | + | 21206:8848-8867 | MS.gene41439:intergenic | 15.0% |
| !!! | AATGAATTATTGACTTAAAT+TGG | + | 21206:4905-4924 | MS.gene41439:intergenic | 15.0% |
| !!! | AATGATCAGTATATTTTTAT+TGG | + | 21206:5138-5157 | MS.gene41439:intergenic | 15.0% |
| !!! | ATATTGATAGCTAAATTAAT+AGG | + | 21206:6428-6447 | MS.gene41439:intergenic | 15.0% |
| !!! | ATTTTAGTATTAGAAACATA+AGG | - | 21206:4721-4740 | MS.gene41439:intron | 15.0% |
| !!! | TATTGATAGCTAAATTAATA+GGG | + | 21206:6427-6446 | MS.gene41439:intergenic | 15.0% |
| !!! | TGTTGCATTTTATTTATTTT+TGG | - | 21206:4222-4241 | MS.gene41439:intron | 15.0% |
| !! | AAATCAATGTGAAACTAATA+AGG | - | 21206:6305-6324 | MS.gene41439:intron | 20.0% |
| !! | ACATGAAATATTGTTAATTC+CGG | + | 21206:6681-6700 | MS.gene41439:intergenic | 20.0% |
| !! | ATAGATTTCTTGCTTTATAT+CGG | - | 21206:7667-7686 | MS.gene41439:intron | 20.0% |
| !! | GAAAAATACTTGATTCAAAT+GGG | - | 21206:7607-7626 | MS.gene41439:CDS | 20.0% |
| !! | TATAGTATCAATCAAACATA+TGG | + | 21206:8802-8821 | MS.gene41439:intergenic | 20.0% |
| !! | TCAAAAACAAAGCAAAAAAA+TGG | + | 21206:8313-8332 | MS.gene41439:intergenic | 20.0% |
| !! | TGAAAAATACTTGATTCAAA+TGG | - | 21206:7606-7625 | MS.gene41439:CDS | 20.0% |
| !! | TGAGGAAATAAAAAAAATTC+AGG | + | 21206:8767-8786 | MS.gene41439:intergenic | 20.0% |
| !! | TTAACAATATTTCATGTTGA+AGG | - | 21206:6684-6703 | MS.gene41439:intron | 20.0% |
| !! | TTCTTAATATAGAAGTTTGA+TGG | + | 21206:8930-8949 | MS.gene41439:intergenic | 20.0% |
| !! | TTGATATTGACATTCATAAT+AGG | - | 21206:7220-7239 | MS.gene41439:intron | 20.0% |
| !!! | AGGTCTTGAAATTATTTTAT+AGG | + | 21206:6580-6599 | MS.gene41439:intergenic | 20.0% |
| !!! | ATATTTTTATTGGCAAGTTT+AGG | + | 21206:5128-5147 | MS.gene41439:intergenic | 20.0% |
| !!! | ATTATTATTGGTAGCATTAA+AGG | - | 21206:7447-7466 | MS.gene41439:intron | 20.0% |
| !!! | CAAAGTTCTATTTTTAAACA+TGG | + | 21206:4961-4980 | MS.gene41439:intergenic | 20.0% |
| !!! | CTGTCCATTTATATTTTATA+CGG | - | 21206:5162-5181 | MS.gene41439:intron | 20.0% |
| !!! | GTGATTTTTTTTCAATCATT+AGG | - | 21206:6612-6631 | MS.gene41439:intron | 20.0% |
| !!! | TGGTGTTTTTTTTTTTTTTG+TGG | + | 21206:4363-4382 | MS.gene41439:intergenic | 20.0% |
| !!! | TTGTTAATGATTGCATTTTT+GGG | - | 21206:5022-5041 | MS.gene41439:intron | 20.0% |
| !!! | TTTGTTAATGATTGCATTTT+TGG | - | 21206:5021-5040 | MS.gene41439:intron | 20.0% |
| !!! | TTTTGATATCGATAATTTTG+AGG | + | 21206:8125-8144 | MS.gene41439:intergenic | 20.0% |
| ! | AAAACAATTACAATGTCAGT+CGG | + | 21206:7044-7063 | MS.gene41439:intergenic | 25.0% |
| ! | AAAATCACATACCTGAATTT+AGG | + | 21206:6600-6619 | MS.gene41439:intergenic | 25.0% |
| ! | AAACTTAACATCCTAAAAAG+AGG | + | 21206:8338-8357 | MS.gene41439:intergenic | 25.0% |
| ! | AAAGCAAGAAATCTATAGAT+GGG | + | 21206:7663-7682 | MS.gene41439:intergenic | 25.0% |
| ! | AAATAAAATGCAACACATTC+AGG | + | 21206:4217-4236 | MS.gene41439:intergenic | 25.0% |
| ! | AATAGAAGCTTCATATTTCT+CGG | + | 21206:7112-7131 | MS.gene41439:intergenic | 25.0% |
| ! | ATAGAAGTTTGATGGAATAA+AGG | + | 21206:8922-8941 | MS.gene41439:intergenic | 25.0% |
| ! | ATCAAATGTGTGAAAAAGTA+GGG | + | 21206:7013-7032 | MS.gene41439:intergenic | 25.0% |
| ! | ATCAGAAAACACTAGAATAT+AGG | + | 21206:8688-8707 | MS.gene41439:intergenic | 25.0% |
| ! | ATGATAAGAATGTTAGTGTA+TGG | - | 21206:4493-4512 | MS.gene41439:intron | 25.0% |
| ! | CTGAAATTCAATTAATAGGA+AGG | - | 21206:5852-5871 | MS.gene41439:CDS | 25.0% |
| ! | GTTTGTTCAAGACATTTAAA+TGG | + | 21206:5818-5837 | MS.gene41439:intergenic | 25.0% |
| ! | TAAAGCAAGAAATCTATAGA+TGG | + | 21206:7664-7683 | MS.gene41439:intergenic | 25.0% |
| ! | TAATTTCAAGACCTAAATTC+AGG | - | 21206:6586-6605 | MS.gene41439:intron | 25.0% |
| ! | TATAAATTTGCCACTAAACT+AGG | - | 21206:5057-5076 | MS.gene41439:intron | 25.0% |
| ! | TATTAGACAAAAAAGAGCTT+AGG | - | 21206:8178-8197 | MS.gene41439:intron | 25.0% |
| ! | TCATAATAATCTGAACAATG+AGG | - | 21206:5573-5592 | MS.gene41439:CDS | 25.0% |
| ! | TCTTTACATTAGTACTTATG+TGG | + | 21206:4853-4872 | MS.gene41439:intergenic | 25.0% |
| ! | TGTATGAAAAACTTTCATCA+AGG | - | 21206:5433-5452 | MS.gene41439:intron | 25.0% |
| ! | TTAAATATGTGATGTGATTG+AGG | - | 21206:8421-8440 | MS.gene41439:intron | 25.0% |
| ! | TTATCGATATCAAAACCTTT+AGG | - | 21206:8130-8149 | MS.gene41439:intron | 25.0% |
| ! | TTATTTAACATCAGTAACCT+GGG | - | 21206:8867-8886 | MS.gene41439:CDS | 25.0% |
| ! | TTTATTTAACATCAGTAACC+TGG | - | 21206:8866-8885 | MS.gene41439:CDS | 25.0% |
| !! | AATTTGATGCATCTATTTTG+TGG | - | 21206:6846-6865 | MS.gene41439:CDS | 25.0% |
| !! | AGATAAAACAGTCTTTTTGA+AGG | + | 21206:5191-5210 | MS.gene41439:intergenic | 25.0% |
| !! | ATTGTTATAAAGAAAGTGCA+CGG | + | 21206:5475-5494 | MS.gene41439:intergenic | 25.0% |
| !! | CAAATGGGTTTATATTAAAG+AGG | - | 21206:7622-7641 | MS.gene41439:CDS | 25.0% |
| !! | CATAATTTAGAATGCAGAAT+TGG | - | 21206:4674-4693 | MS.gene41439:intron | 25.0% |
| !! | GATAAAACAGTCTTTTTGAA+GGG | + | 21206:5190-5209 | MS.gene41439:intergenic | 25.0% |
| !! | GCTAAAGTACTTACAATTTA+AGG | + | 21206:5408-5427 | MS.gene41439:intergenic | 25.0% |
| !! | GTGTCTGAAATTCAATTAAT+AGG | - | 21206:5848-5867 | MS.gene41439:CDS | 25.0% |
| !! | TACTTACAATTTAAGGCATT+TGG | + | 21206:5401-5420 | MS.gene41439:intergenic | 25.0% |
| !!! | AACTAAGAAGTTGATAAATG+CGG | + | 21206:6364-6383 | MS.gene41439:intergenic | 25.0% |
| !!! | AATTATTTTATAGGCAGTGT+CGG | + | 21206:6571-6590 | MS.gene41439:intergenic | 25.0% |
| !!! | AGAACTTTTAAAGATATGGA+TGG | - | 21206:4827-4846 | MS.gene41439:intron | 25.0% |
| !!! | ATAAAACAGTCTTTTTGAAG+GGG | + | 21206:5189-5208 | MS.gene41439:intergenic | 25.0% |
| !!! | GATCTTTTTTATGATAGAGA+GGG | + | 21206:8100-8119 | MS.gene41439:intergenic | 25.0% |
| !!! | TCTTTTATTTTTTCCCAGAA+TGG | - | 21206:8732-8751 | MS.gene41439:intron | 25.0% |
| !!! | TGATCTTTTTTATGATAGAG+AGG | + | 21206:8101-8120 | MS.gene41439:intergenic | 25.0% |
| !!! | TTGGAGAACTTTTAAAGATA+TGG | - | 21206:4823-4842 | MS.gene41439:intron | 25.0% |
| !!! | TTTGCAATTTTGACATTGTT+GGG | - | 21206:7499-7518 | MS.gene41439:intron | 25.0% |
| AAATTAATAGGGAAGTAGCA+AGG | + | 21206:6416-6435 | MS.gene41439:intergenic | 30.0% | |
| AACACACTTAAAGAATACGA+AGG | + | 21206:8609-8628 | MS.gene41439:intergenic | 30.0% | |
| AACACTCACAATACTTCTTA+AGG | + | 21206:5910-5929 | MS.gene41439:intergenic | 30.0% | |
| AATGCAGAATTGGATGTATT+AGG | - | 21206:4684-4703 | MS.gene41439:intron | 30.0% | |
| ATACAATGTATTGAGTGTGT+TGG | + | 21206:8271-8290 | MS.gene41439:intergenic | 30.0% | |
| ATGCAATCATTAACAAACCT+CGG | + | 21206:5018-5037 | MS.gene41439:intergenic | 30.0% | |
| ATGCAGAATTGGATGTATTA+GGG | - | 21206:4685-4704 | MS.gene41439:intron | 30.0% | |
| ATGTATTAGGGATGTATGTT+TGG | - | 21206:4697-4716 | MS.gene41439:intron | 30.0% | |
| ATTATAAACCCATACACAAG+TGG | - | 21206:4268-4287 | MS.gene41439:intron | 30.0% | |
| CAACAATGTCAAAATTGCAA+AGG | + | 21206:7500-7519 | MS.gene41439:intergenic | 30.0% | |
| CACATCAATTTAAGTGTTTC+TGG | + | 21206:7255-7274 | MS.gene41439:intergenic | 30.0% | |
| CCAAACATAGTGAATTTGAA+TGG | + | 21206:6280-6299 | MS.gene41439:intergenic | 30.0% | |
| CCATTCAAATTCACTATGTT+TGG | - | 21206:6277-6296 | MS.gene41439:intron | 30.0% | |
| CTAATATAGAAAGATGTTCC+TGG | + | 21206:8164-8183 | MS.gene41439:intergenic | 30.0% | |
| CTTGGTGAACTGATTATTAT+TGG | - | 21206:7435-7454 | MS.gene41439:intron | 30.0% | |
| GAAGAAAATGGTGATAAGTA+TGG | - | 21206:8001-8020 | MS.gene41439:intron | 30.0% | |
| GACAATGCATAATATATGCA+AGG | - | 21206:4315-4334 | MS.gene41439:intron | 30.0% | |
| GAGAAAACACCTAAAAACAA+TGG | - | 21206:9043-9062 | MS.gene41439:CDS | 30.0% | |
| GATCAAATGTGTGAAAAAGT+AGG | + | 21206:7014-7033 | MS.gene41439:intergenic | 30.0% | |
| GCTTCTTTGCATTATTGATA+CGG | - | 21206:6201-6220 | MS.gene41439:CDS | 30.0% | |
| GGGACCGTATAAAATATAAA+TGG | + | 21206:5169-5188 | MS.gene41439:intergenic | 30.0% | |
| TAAATGTCTTGAACAAACTC+AGG | - | 21206:5820-5839 | MS.gene41439:CDS | 30.0% | |
| TAAATTGATGTGTGATGAAC+AGG | - | 21206:7263-7282 | MS.gene41439:intron | 30.0% | |
| TACAATGTATTGAGTGTGTT+GGG | + | 21206:8270-8289 | MS.gene41439:intergenic | 30.0% | |
| TAGCTTCTATTTGAAGACAA+GGG | - | 21206:4758-4777 | MS.gene41439:intron | 30.0% | |
| TAGTTACTCTTTCTGTTGTA+GGG | - | 21206:6251-6270 | MS.gene41439:intron | 30.0% | |
| TCAAAATAAAGCAGGGTTAA+AGG | - | 21206:5333-5352 | MS.gene41439:intron | 30.0% | |
| TCAAATGTGTGAAAAAGTAG+GGG | + | 21206:7012-7031 | MS.gene41439:intergenic | 30.0% | |
| TCAAATTTCCAGAAATGAGA+GGG | - | 21206:7064-7083 | MS.gene41439:CDS | 30.0% | |
| TCCTGTCTTAAATATACATG+TGG | - | 21206:7542-7561 | MS.gene41439:intron | 30.0% | |
| TGAAATTAAGAACGTCAAGT+TGG | - | 21206:7878-7897 | MS.gene41439:intron | 30.0% | |
| TTAATCGTCATTAAGGAGTA+AGG | + | 21206:8634-8653 | MS.gene41439:intergenic | 30.0% | |
| TTAGCTTCTATTTGAAGACA+AGG | - | 21206:4757-4776 | MS.gene41439:intron | 30.0% | |
| TTAGTTACTCTTTCTGTTGT+AGG | - | 21206:6250-6269 | MS.gene41439:intron | 30.0% | |
| TTCAAATTTCCAGAAATGAG+AGG | - | 21206:7063-7082 | MS.gene41439:CDS | 30.0% | |
| TTTCCACAACTGAAAAATCA+AGG | - | 21206:8380-8399 | MS.gene41439:intron | 30.0% | |
| ! | AAAATCCAGGAAAGTTTTTC+TGG | - | 21206:6127-6146 | MS.gene41439:intron | 30.0% |
| ! | ACACTCTAAAGAAGCAAAAA+CGG | - | 21206:5359-5378 | MS.gene41439:intron | 30.0% |
| ! | ACCACATGTATATTTAAGAC+AGG | + | 21206:7546-7565 | MS.gene41439:intergenic | 30.0% |
| ! | ATTGACTGCAAGAATTTTGA+AGG | - | 21206:5968-5987 | MS.gene41439:intron | 30.0% |
| ! | ATTTACAATTTTCAGAGCAG+AGG | + | 21206:5946-5965 | MS.gene41439:intergenic | 30.0% |
| ! | TAACAATTTCGGCATTTTGA+CGG | - | 21206:4432-4451 | MS.gene41439:intron | 30.0% |
| ! | TATTGGTAGCATTAAAGGTT+AGG | - | 21206:7452-7471 | MS.gene41439:intron | 30.0% |
| ! | TTAATAGGAAGGCACAATAA+AGG | - | 21206:5863-5882 | MS.gene41439:CDS | 30.0% |
| ! | TTTCCAAATTTTATGCTGCT+AGG | - | 21206:6906-6925 | MS.gene41439:CDS | 30.0% |
| !! | ACTAAGAAGTTGATAAATGC+GGG | + | 21206:6363-6382 | MS.gene41439:intergenic | 30.0% |
| !! | CGCTATCTTGAATTTTAATC+AGG | - | 21206:6494-6513 | MS.gene41439:intron | 30.0% |
| !! | CTTTGCAATTTTGACATTGT+TGG | - | 21206:7498-7517 | MS.gene41439:intron | 30.0% |
| !! | GGTGCTGTTAATAACTATTA+TGG | - | 21206:5761-5780 | MS.gene41439:CDS | 30.0% |
| !! | TACTAATGTAAAGAGCATCA+GGG | - | 21206:4859-4878 | MS.gene41439:intron | 30.0% |
| !! | TTGCAATTTTGACATTGTTG+GGG | - | 21206:7500-7519 | MS.gene41439:intron | 30.0% |
| !! | TTTTTCAATCATTAGGTGAG+CGG | - | 21206:6619-6638 | MS.gene41439:intron | 30.0% |
| !!! | ATAGAAACTTCTGGTTTTTG+CGG | + | 21206:5673-5692 | MS.gene41439:intergenic | 30.0% |
| !!! | ATTTTTGGTCTGAAAGCATT+TGG | + | 21206:5640-5659 | MS.gene41439:intergenic | 30.0% |
| !!! | CTGATATTTTAGCTTACTTG+TGG | - | 21206:5790-5809 | MS.gene41439:CDS | 30.0% |
| !!! | TGTTTTTGAGACCTCTTTTT+AGG | - | 21206:8324-8343 | MS.gene41439:intron | 30.0% |
| !!! | TTAGTTCTGTTTTAATCCCT+TGG | - | 21206:6378-6397 | MS.gene41439:CDS | 30.0% |
| !!! | TTTAACCCTGCTTTATTTTG+AGG | + | 21206:5334-5353 | MS.gene41439:intergenic | 30.0% |
| !!! | TTTTTTTTTTGTGGTGTTCG+AGG | + | 21206:4354-4373 | MS.gene41439:intergenic | 30.0% |
| AAAAAGATTCTTGGCTCATG+AGG | + | 21206:7725-7744 | MS.gene41438:intergenic | 35.0% | |
| AAAACACCATACACAAGTGA+AGG | - | 21206:4374-4393 | MS.gene41439:intron | 35.0% | |
| AAGCGTAATGCATCATAAAG+AGG | + | 21206:7808-7827 | MS.gene41439:intergenic | 35.0% | |
| ACGCCAACTATAAATACATG+AGG | + | 21206:5718-5737 | MS.gene41439:intergenic | 35.0% | |
| AGAAATCTATAGATGGGTCA+CGG | + | 21206:7657-7676 | MS.gene41439:intergenic | 35.0% | |
| ATACTACTGATCTTTCGTTG+AGG | - | 21206:9161-9180 | MS.gene41439:CDS | 35.0% | |
| ATATGGCTAAAGATGAACTG+AGG | + | 21206:8785-8804 | MS.gene41439:intergenic | 35.0% | |
| ATGTGAGTGAGACAAAAAGA+TGG | + | 21206:7699-7718 | MS.gene41439:intergenic | 35.0% | |
| ATTTGCCAGAAAAACTTTCC+TGG | + | 21206:6135-6154 | MS.gene41439:intergenic | 35.0% | |
| ATTTGTCTTTGCAGCTTCTT+TGG | + | 21206:6777-6796 | MS.gene41439:intergenic | 35.0% | |
| CATTATTGATACGGTTTCGT+TGG | - | 21206:6210-6229 | MS.gene41439:CDS | 35.0% | |
| CCTAAAAACAATGGTGATAG+TGG | - | 21206:9052-9071 | MS.gene41439:CDS | 35.0% | |
| CCTAGGTAAAAGACTGTAAA+TGG | - | 21206:8072-8091 | MS.gene41439:intron | 35.0% | |
| CGCCAACTATAAATACATGA+GGG | + | 21206:5717-5736 | MS.gene41439:intergenic | 35.0% | |
| CTACTAACCATAGAAACTTC+TGG | + | 21206:5682-5701 | MS.gene41439:intergenic | 35.0% | |
| CTCCCTCATGTATTTATAGT+TGG | - | 21206:5712-5731 | MS.gene41439:CDS | 35.0% | |
| GCAAAAACCAGAAGTTTCTA+TGG | - | 21206:5672-5691 | MS.gene41439:CDS | 35.0% | |
| GTCAAAATGCCGAAATTGTT+AGG | + | 21206:4433-4452 | MS.gene41439:intergenic | 35.0% | |
| GTTGTTCGACCTAACAATTT+CGG | - | 21206:4421-4440 | MS.gene41439:intron | 35.0% | |
| TAATTAACCACACGTTGTGT+TGG | - | 21206:4568-4587 | MS.gene41439:intron | 35.0% | |
| TAGAAACATAAGGCTTATGC+TGG | - | 21206:4731-4750 | MS.gene41439:intron | 35.0% | |
| TCACCATGCAAAAAGATTCT+TGG | + | 21206:7734-7753 | MS.gene41439:intergenic | 35.0% | |
| TCTGAATCAAGAAGCAATTC+TGG | - | 21206:7970-7989 | MS.gene41439:intron | 35.0% | |
| TGAATCATCGAAACTAACTG+CGG | + | 21206:4064-4083 | MS.gene41439:intergenic | 35.0% | |
| TGCATCAGTGAGCTAAAATT+TGG | - | 21206:5740-5759 | MS.gene41439:CDS | 35.0% | |
| TGTCCTAGCAGCATAAAATT+TGG | + | 21206:6912-6931 | MS.gene41439:intergenic | 35.0% | |
| TTAAATGCAACACAATCCAC+AGG | + | 21206:4469-4488 | MS.gene41439:intergenic | 35.0% | |
| TTCCTGGATAACTATCCTAA+AGG | + | 21206:8148-8167 | MS.gene41439:intergenic | 35.0% | |
| ! | AAGGAAATTGATGGTTCCAA+GGG | + | 21206:6397-6416 | MS.gene41439:intergenic | 35.0% |
| ! | AATCTTTTTGCATGGTGAGA+TGG | - | 21206:7736-7755 | MS.gene41439:intron | 35.0% |
| ! | ATCTTTTTGCATGGTGAGAT+GGG | - | 21206:7737-7756 | MS.gene41439:intron | 35.0% |
| ! | ATGTCCATTAGTTCTTGCAT+AGG | + | 21206:9140-9159 | MS.gene41439:intergenic | 35.0% |
| ! | CCATTTACAGTCTTTTACCT+AGG | + | 21206:8075-8094 | MS.gene41439:intergenic | 35.0% |
| ! | CTTATCACCATTTTCTTCCT+TGG | + | 21206:7999-8018 | MS.gene41439:intergenic | 35.0% |
| ! | GATTTTTCACATTCTGTGTC+TGG | + | 21206:6730-6749 | MS.gene41439:intergenic | 35.0% |
| ! | TAGCTAATTTTGCAACTGCA+AGG | - | 21206:5494-5513 | MS.gene41439:intron | 35.0% |
| ! | TAGTCTAGTTCAAATCAGAC+AGG | - | 21206:6027-6046 | MS.gene41439:intron | 35.0% |
| ! | TCCTGGATTTTTCTCTTCTT+GGG | + | 21206:6118-6137 | MS.gene41439:intergenic | 35.0% |
| ! | TCTCTTCTTGGGTGTTATAT+GGG | + | 21206:6107-6126 | MS.gene41439:intergenic | 35.0% |
| ! | TTCCTGGATTTTTCTCTTCT+TGG | + | 21206:6119-6138 | MS.gene41439:intergenic | 35.0% |
| ! | TTCTCTTCTTGGGTGTTATA+TGG | + | 21206:6108-6127 | MS.gene41439:intergenic | 35.0% |
| ! | TTGATGCATCTATTTTGTGG+TGG | - | 21206:6849-6868 | MS.gene41439:CDS | 35.0% |
| !! | AACCTTTAGGATAGTTATCC+AGG | - | 21206:8143-8162 | MS.gene41439:intron | 35.0% |
| !! | ATTTTGAAGGAAGTGACGAA+TGG | - | 21206:5981-6000 | MS.gene41439:intron | 35.0% |
| !! | CCACTATCACCATTGTTTTT+AGG | + | 21206:9055-9074 | MS.gene41439:intergenic | 35.0% |
| !! | CTAAGAAGTTGATAAATGCG+GGG | + | 21206:6362-6381 | MS.gene41439:intergenic | 35.0% |
| !! | CTTCCTTGATTTTTCAGTTG+TGG | + | 21206:8386-8405 | MS.gene41439:intergenic | 35.0% |
| !! | GTACTAATGTAAAGAGCATC+AGG | - | 21206:4858-4877 | MS.gene41439:intron | 35.0% |
| !! | TGCAATTTTGACATTGTTGG+GGG | - | 21206:7501-7520 | MS.gene41439:intron | 35.0% |
| !! | TTTTTCAGCTATGTCAAACG+AGG | + | 21206:7593-7612 | MS.gene41439:intergenic | 35.0% |
| !!! | TATTTTGAGGCTGTGATCTA+GGG | + | 21206:5321-5340 | MS.gene41439:intergenic | 35.0% |
| !!! | TTATTTTGAGGCTGTGATCT+AGG | + | 21206:5322-5341 | MS.gene41439:intergenic | 35.0% |
| !!! | TTATTTTTTCCCAGAATGGC+TGG | - | 21206:8736-8755 | MS.gene41439:intron | 35.0% |
| AAAGGATGTCACTGCAAGAA+AGG | - | 21206:5881-5900 | MS.gene41439:intron | 40.0% | |
| AAATCCAAATGCATTTGCGC+CGG | + | 21206:3938-3957 | MS.gene41439:intergenic | 40.0% | |
| AAGTCCAACTGCTCCATTAA+TGG | + | 21206:6065-6084 | MS.gene41439:intergenic | 40.0% | |
| ACCCAAGAAGAGAAAAATCC+AGG | - | 21206:6114-6133 | MS.gene41439:intron | 40.0% | |
| AGATTGCAGAAGCAGAAAGT+GGG | - | 21206:8523-8542 | MS.gene41439:intron | 40.0% | |
| ATCATAAAGAGGCCAGGTAT+GGG | + | 21206:7797-7816 | MS.gene41439:intergenic | 40.0% | |
| ATGTCTTGAACAAACTCAGG+AGG | - | 21206:5823-5842 | MS.gene41439:CDS | 40.0% | |
| ATGTGTGAAAAAGTAGGGGA+CGG | + | 21206:7008-7027 | MS.gene41439:intergenic | 40.0% | |
| ATTAATGGAGCAGTTGGACT+TGG | - | 21206:6064-6083 | MS.gene41439:intron | 40.0% | |
| CAAAAGTCTTCCAACTCTGA+TGG | - | 21206:7354-7373 | MS.gene41439:CDS | 40.0% | |
| CACAGCCTCAAAATAAAGCA+GGG | - | 21206:5326-5345 | MS.gene41439:intron | 40.0% | |
| CACTGCTATGGGTGAATATA+TGG | + | 21206:7922-7941 | MS.gene41439:intergenic | 40.0% | |
| GAAATCTATAGATGGGTCAC+GGG | + | 21206:7656-7675 | MS.gene41439:intergenic | 40.0% | |
| GAATCATCGAAACTAACTGC+GGG | + | 21206:4063-4082 | MS.gene41439:intergenic | 40.0% | |
| GATAAGGGAGATGAAGCTAT+AGG | + | 21206:6528-6547 | MS.gene41439:intergenic | 40.0% | |
| GATGATGCTACAAAGTAAGC+TGG | + | 21206:7848-7867 | MS.gene41439:intergenic | 40.0% | |
| GCAACTAATGCTGCCATTAA+TGG | - | 21206:6049-6068 | MS.gene41439:intron | 40.0% | |
| GCTACCTATGCAAGAACTAA+TGG | - | 21206:9133-9152 | MS.gene41439:CDS | 40.0% | |
| GGAAGTAGCAAGGAAATTGA+TGG | + | 21206:6406-6425 | MS.gene41439:intergenic | 40.0% | |
| GTTGGGGGAAAAATTAACTC+AGG | - | 21206:7516-7535 | MS.gene41439:intron | 40.0% | |
| TAATGCATCATAAAGAGGCC+AGG | + | 21206:7803-7822 | MS.gene41439:intergenic | 40.0% | |
| TAGCTAATCGGAAATTTGCG+CGG | - | 21206:3795-3814 | MS.gene41439:CDS | 40.0% | |
| TCACAGCCTCAAAATAAAGC+AGG | - | 21206:5325-5344 | MS.gene41439:intron | 40.0% | |
| TCACTCACAGATCAAACTGT+CGG | - | 21206:6154-6173 | MS.gene41439:intron | 40.0% | |
| TCATTCCAATTGCCTCCTTT+CGG | + | 21206:5603-5622 | MS.gene41439:intergenic | 40.0% | |
| TCTGTTCTGTCTCTCTCTTT+GGG | - | 21206:8564-8583 | MS.gene41439:intron | 40.0% | |
| TGATGTGTGATGAACAGGAT+GGG | - | 21206:7268-7287 | MS.gene41439:intron | 40.0% | |
| TGTTATATGGGTTCCAGAGA+TGG | + | 21206:6095-6114 | MS.gene41439:intergenic | 40.0% | |
| TGTTGATGCATATCGAACAC+CGG | - | 21206:4591-4610 | MS.gene41439:intron | 40.0% | |
| TTCATGTTGAAGGTCTGTGT+TGG | - | 21206:6694-6713 | MS.gene41439:intron | 40.0% | |
| TTGATGTGTGATGAACAGGA+TGG | - | 21206:7267-7286 | MS.gene41439:intron | 40.0% | |
| TTTGCATGATTCTCCGAAAC+AGG | + | 21206:7180-7199 | MS.gene41439:intergenic | 40.0% | |
| ! | ATTTTCAGTCACCAGTGAGA+CGG | - | 21206:3954-3973 | MS.gene41439:intron | 40.0% |
| ! | CAAGGAAATTGATGGTTCCA+AGG | + | 21206:6398-6417 | MS.gene41439:intergenic | 40.0% |
| ! | CAAGGAAGCGCATTGTTATT+TGG | - | 21206:8398-8417 | MS.gene41439:intron | 40.0% |
| ! | GAACAGGATGGGATGTTTTT+CGG | - | 21206:7279-7298 | MS.gene41439:CDS | 40.0% |
| ! | GAGCCAAGAATCTTTTTGCA+TGG | - | 21206:7728-7747 | MS.gene41439:intron | 40.0% |
| ! | GATAGTGGTGCTGAAACTAA+GGG | - | 21206:9067-9086 | MS.gene41439:CDS | 40.0% |
| ! | TGTGCGAAAAGCATGATTCT+TGG | - | 21206:4804-4823 | MS.gene41439:intron | 40.0% |
| ! | TTCGGTAATGGTTCTGCAAA+TGG | - | 21206:7297-7316 | MS.gene41439:CDS | 40.0% |
| ! | TTGGTGATTGCCTAGTTTAG+TGG | + | 21206:5070-5089 | MS.gene41439:intergenic | 40.0% |
| ! | TTTTCACATTCTGTGTCTGG+AGG | + | 21206:6727-6746 | MS.gene41439:intergenic | 40.0% |
| !! | GATGGGATGTTTTTCGGTAA+TGG | - | 21206:7285-7304 | MS.gene41439:CDS | 40.0% |
| !! | TAATGCAAAGAAGCACCTGT+TGG | + | 21206:6195-6214 | MS.gene41439:intergenic | 40.0% |
| !! | TGATAGTGGTGCTGAAACTA+AGG | - | 21206:9066-9085 | MS.gene41439:CDS | 40.0% |
| !! | TTAAGTGTTTCTGGTGACAG+TGG | + | 21206:7246-7265 | MS.gene41439:intergenic | 40.0% |
| !!! | TGCAGGTTTTGACTAACACA+TGG | - | 21206:6796-6815 | MS.gene41439:CDS | 40.0% |
| AAAGGAAGCTGACAGGGATA+AGG | + | 21206:6544-6563 | MS.gene41439:intergenic | 45.0% | |
| AAATGAGAGGGAAAGCTGCT+AGG | - | 21206:7076-7095 | MS.gene41439:CDS | 45.0% | |
| AAGGAAGCTGACAGGGATAA+GGG | + | 21206:6543-6562 | MS.gene41439:intergenic | 45.0% | |
| ACAACAAGGTGACACTGCTA+TGG | + | 21206:7934-7953 | MS.gene41439:intergenic | 45.0% | |
| ACCAAGAACATCCCTGAACT+TGG | + | 21206:7421-7440 | MS.gene41439:intergenic | 45.0% | |
| ACCAAGTTCAGGGATGTTCT+TGG | - | 21206:7417-7436 | MS.gene41439:CDS | 45.0% | |
| AGAAGCAATTCTGGTCACCA+AGG | - | 21206:7979-7998 | MS.gene41439:intron | 45.0% | |
| AGATGTTGCCAAGCCTGTTT+CGG | - | 21206:7164-7183 | MS.gene41439:intron | 45.0% | |
| AGCAGTGTATCCATCAGAGT+TGG | + | 21206:7367-7386 | MS.gene41439:intergenic | 45.0% | |
| ATATGGGTTCCAGAGATGGA+GGG | + | 21206:6091-6110 | MS.gene41439:intergenic | 45.0% | |
| ATCAACACCAACACAACGTG+TGG | + | 21206:4578-4597 | MS.gene41439:intergenic | 45.0% | |
| ATGATTCTCCGAAACAGGCT+TGG | + | 21206:7175-7194 | MS.gene41439:intergenic | 45.0% | |
| CAACAAGGTGACACTGCTAT+GGG | + | 21206:7933-7952 | MS.gene41439:intergenic | 45.0% | |
| CACTTTCTGCTTCTGCAATC+TGG | + | 21206:8524-8543 | MS.gene41439:intergenic | 45.0% | |
| CAGATTGCAGAAGCAGAAAG+TGG | - | 21206:8522-8541 | MS.gene41439:intron | 45.0% | |
| CATCATAAAGAGGCCAGGTA+TGG | + | 21206:7798-7817 | MS.gene41439:intergenic | 45.0% | |
| CATTATTCTTGCAGTTGCCC+AGG | + | 21206:8887-8906 | MS.gene41439:intergenic | 45.0% | |
| CATTCCAATTGCCTCCTTTC+GGG | + | 21206:5602-5621 | MS.gene41439:intergenic | 45.0% | |
| CCAACACCTTCACTTGTGTA+TGG | + | 21206:4383-4402 | MS.gene41439:intergenic | 45.0% | |
| CCTTACCAAAGCTAAGCTCA+CGG | + | 21206:4296-4315 | MS.gene41439:intergenic | 45.0% | |
| CGACGCTGGATTTAGCTAAT+CGG | - | 21206:3783-3802 | MS.gene41439:CDS | 45.0% | |
| CTCTGTTCTGTCTCTCTCTT+TGG | - | 21206:8563-8582 | MS.gene41439:intron | 45.0% | |
| CTGGTCACCAAGGAAGAAAA+TGG | - | 21206:7989-8008 | MS.gene41439:intron | 45.0% | |
| CTGTTCTGTCTCTCTCTTTG+GGG | - | 21206:8565-8584 | MS.gene41439:intron | 45.0% | |
| CTGTTTATGCAGAGCAGGAA+AGG | - | 21206:7385-7404 | MS.gene41439:CDS | 45.0% | |
| CTTACCAAAGCTAAGCTCAC+GGG | + | 21206:4295-4314 | MS.gene41439:intergenic | 45.0% | |
| GAAGCTGCAAAGACAAATGC+AGG | - | 21206:6779-6798 | MS.gene41439:CDS | 45.0% | |
| GATTGAAAATGCGGCATCAC+CGG | + | 21206:4034-4053 | MS.gene41439:intergenic | 45.0% | |
| GCTTATCCTGACCAAGTTCA+GGG | - | 21206:7407-7426 | MS.gene41439:CDS | 45.0% | |
| GGAAACAAAGGAAGCTGACA+GGG | + | 21206:6550-6569 | MS.gene41439:intergenic | 45.0% | |
| GTTAGGTCGAACAACATGAC+CGG | + | 21206:4416-4435 | MS.gene41439:intergenic | 45.0% | |
| TAAGCCGATGCATGACAACA+AGG | + | 21206:7948-7967 | MS.gene41439:intergenic | 45.0% | |
| TACAATCGGATGTCAGAGCA+TGG | + | 21206:6460-6479 | MS.gene41439:intergenic | 45.0% | |
| TATATGGGTTCCAGAGATGG+AGG | + | 21206:6092-6111 | MS.gene41439:intergenic | 45.0% | |
| TGTGTGAAAAAGTAGGGGAC+GGG | + | 21206:7007-7026 | MS.gene41439:intergenic | 45.0% | |
| TTACCAAAGCTAAGCTCACG+GGG | + | 21206:4294-4313 | MS.gene41439:intergenic | 45.0% | |
| TTAGGTCGAACAACATGACC+GGG | + | 21206:4415-4434 | MS.gene41439:intergenic | 45.0% | |
| TTCTTGCATAGGTAGCCACT+GGG | + | 21206:9129-9148 | MS.gene41439:intergenic | 45.0% | |
| ! | ATAGGCAGTGTCGGAAACAA+AGG | + | 21206:6562-6581 | MS.gene41439:intergenic | 45.0% |
| ! | ATGGTTTGTGACAGTGACTG+CGG | + | 21206:3881-3900 | MS.gene41439:intergenic | 45.0% |
| ! | ATTTTCAGAGCAGAGGACGT+TGG | + | 21206:5939-5958 | MS.gene41439:intergenic | 45.0% |
| ! | CCATACACAAGTGAAGGTGT+TGG | - | 21206:4380-4399 | MS.gene41439:intron | 45.0% |
| ! | CTCCATACGAAAAGTGTGTC+CGG | + | 21206:4613-4632 | MS.gene41439:intergenic | 45.0% |
| ! | GTCACCTTGTTGTCATGCAT+CGG | - | 21206:7941-7960 | MS.gene41439:intron | 45.0% |
| ! | TGTGGTGGTGATTGTTTCCA+CGG | + | 21206:3980-3999 | MS.gene41439:intergenic | 45.0% |
| !! | TGCGGACTGCTTGCAATTTT+TGG | + | 21206:5655-5674 | MS.gene41439:intergenic | 45.0% |
| !! | TGGGCATATTGATTCAGCTG+AGG | - | 21206:7756-7775 | MS.gene41439:intron | 45.0% |
| !!! | TTTTTTCCCAGAATGGCTGG+TGG | - | 21206:8739-8758 | MS.gene41439:intron | 45.0% |
| !!! | TCTTTAAAATTTATAATTTA+GGG | + | 21206:8480-8499 | MS.gene41439:intergenic | 5.0% |
| AACCTCTTCACCGGAAGCTT+TGG | + | 21206:4106-4125 | MS.gene41439:intergenic | 50.0% | |
| ACTGTGAGTGCTATGCAGCT+GGG | - | 21206:5518-5537 | MS.gene41439:CDS | 50.0% | |
| AGCGCTTGAAACCTCTTCAC+CGG | + | 21206:4115-4134 | MS.gene41439:intergenic | 50.0% | |
| CATGACTGCTCAACACCAAC+AGG | - | 21206:6177-6196 | MS.gene41439:CDS | 50.0% | |
| CCAGGTATGGGTGTACTACA+TGG | + | 21206:7785-7804 | MS.gene41439:intergenic | 50.0% | |
| CCATGTAGTACACCCATACC+TGG | - | 21206:7782-7801 | MS.gene41439:intron | 50.0% | |
| CGGAAACAAAGGAAGCTGAC+AGG | + | 21206:6551-6570 | MS.gene41439:intergenic | 50.0% | |
| GAACATCCCTGAACTTGGTC+AGG | + | 21206:7416-7435 | MS.gene41439:intergenic | 50.0% | |
| GAGCATCAGGGATGAAAGTC+TGG | - | 21206:4871-4890 | MS.gene41439:intron | 50.0% | |
| GCAATCTGAGCATCATTCCG+AGG | - | 21206:4998-5017 | MS.gene41439:intron | 50.0% | |
| GCAGCTGGGATCTATTGTGA+TGG | - | 21206:5532-5551 | MS.gene41439:CDS | 50.0% | |
| GCAGCTTTCCCTCTCATTTC+TGG | + | 21206:7075-7094 | MS.gene41439:intergenic | 50.0% | |
| GCTAGGAGACTCGTTTCTGA+AGG | + | 21206:5299-5318 | MS.gene41439:intergenic | 50.0% | |
| GCTGCCATTAATGGAGCAGT+TGG | - | 21206:6058-6077 | MS.gene41439:intron | 50.0% | |
| GGAAACAATCACCACCACAG+TGG | - | 21206:3981-4000 | MS.gene41439:intron | 50.0% | |
| GGAGGCAATTGGAATGACAC+TGG | - | 21206:5606-5625 | MS.gene41439:CDS | 50.0% | |
| GGCTTATCCTGACCAAGTTC+AGG | - | 21206:7406-7425 | MS.gene41439:CDS | 50.0% | |
| GTACTCCACACCAAAGCTTC+CGG | - | 21206:4093-4112 | MS.gene41439:intron | 50.0% | |
| GTTCTTGCATAGGTAGCCAC+TGG | + | 21206:9130-9149 | MS.gene41439:intergenic | 50.0% | |
| TACTGTGAGTGCTATGCAGC+TGG | - | 21206:5517-5536 | MS.gene41439:CDS | 50.0% | |
| TAGGTCGAACAACATGACCG+GGG | + | 21206:4414-4433 | MS.gene41439:intergenic | 50.0% | |
| TCGGAAATTTGCGCGGCAAT+TGG | - | 21206:3802-3821 | MS.gene41439:CDS | 50.0% | |
| TCTTTCGTTGAGGTTGCCTG+CGG | - | 21206:9171-9190 | MS.gene41439:CDS | 50.0% | |
| ! | CACCGGACACACTTTTCGTA+TGG | - | 21206:4608-4627 | MS.gene41439:intron | 50.0% |
| ! | CACTGCTGTTTATGCAGAGC+AGG | - | 21206:7380-7399 | MS.gene41439:CDS | 50.0% |
| ! | GGAAGCTTTGGTGTGGAGTA+CGG | + | 21206:4094-4113 | MS.gene41439:intergenic | 50.0% |
| !! | CCGTGAGCTTAGCTTTGGTA+AGG | - | 21206:4293-4312 | MS.gene41439:intron | 50.0% |
| !! | GGCATTTTGACGGTTGAGCT+AGG | - | 21206:4442-4461 | MS.gene41439:intron | 50.0% |
| AAATGCATTTGCGCCGGAGG+AGG | + | 21206:3932-3951 | MS.gene41439:intergenic | 55.0% | |
| AGCCACTGGGATGGAGCAAT+TGG | + | 21206:9116-9135 | MS.gene41439:intergenic | 55.0% | |
| ATCGAAACTAACTGCGGGCG+CGG | + | 21206:4058-4077 | MS.gene41439:intergenic | 55.0% | |
| CACCAAAGCTTCCGGTGAAG+AGG | - | 21206:4101-4120 | MS.gene41439:intron | 55.0% | |
| CAGGAACCACCAGCCATTCT+GGG | + | 21206:8748-8767 | MS.gene41439:intergenic | 55.0% | |
| GAACAATGAGGCTGCCCGAA+AGG | - | 21206:5585-5604 | MS.gene41439:CDS | 55.0% | |
| GGCGACAATGTCAGGTACGA+CGG | + | 21206:3851-3870 | MS.gene41439:intergenic | 55.0% | |
| GGGCGCGGTGATTGAAAATG+CGG | + | 21206:4043-4062 | MS.gene41439:intergenic | 55.0% | |
| GGTGTTCGAGGTTCGACACT+CGG | + | 21206:4342-4361 | MS.gene41439:intergenic | 55.0% | |
| TCACGGGGCCACTTGTGTAT+GGG | + | 21206:4279-4298 | MS.gene41439:intergenic | 55.0% | |
| TCAGGAACCACCAGCCATTC+TGG | + | 21206:8749-8768 | MS.gene41439:intergenic | 55.0% | |
| TCCAAATGCATTTGCGCCGG+AGG | + | 21206:3935-3954 | MS.gene41439:intergenic | 55.0% | |
| TCCTCCGGCGCAAATGCATT+TGG | - | 21206:3931-3950 | MS.gene41439:CDS | 55.0% | |
| TGAAAATGCGGCATCACCGG+CGG | + | 21206:4031-4050 | MS.gene41439:intergenic | 55.0% | |
| TGCATAGGTAGCCACTGGGA+TGG | + | 21206:9125-9144 | MS.gene41439:intergenic | 55.0% | |
| TGCCAATTGCTCCATCCCAG+TGG | - | 21206:9111-9130 | MS.gene41439:CDS | 55.0% | |
| ! | CTTCACCGGAAGCTTTGGTG+TGG | + | 21206:4101-4120 | MS.gene41439:intergenic | 55.0% |
| ! | TGAGGCTGTGATCTAGGGCT+AGG | + | 21206:5316-5335 | MS.gene41439:intergenic | 55.0% |
| !! | AGGTGTTGGTGTTCGAACCC+CGG | - | 21206:4394-4413 | MS.gene41439:intron | 55.0% |
| ACCGTCGGATTTGCCTCCTC+CGG | - | 21206:3916-3935 | MS.gene41439:CDS | 60.0% | |
| CAATGAGGCTGCCCGAAAGG+AGG | - | 21206:5588-5607 | MS.gene41439:CDS | 60.0% | |
| CAGAGCAGAGGACGTTGGCA+TGG | + | 21206:5934-5953 | MS.gene41439:intergenic | 60.0% | |
| CTCACGGGGCCACTTGTGTA+TGG | + | 21206:4280-4299 | MS.gene41439:intergenic | 60.0% | |
| GACGGTTGAGCTAGGACCTG+TGG | - | 21206:4450-4469 | MS.gene41439:intron | 60.0% | |
| GAGAACGTCACAGTCTCCGC+CGG | - | 21206:4012-4031 | MS.gene41439:intron | 60.0% | |
| GCTGCCCGAAAGGAGGCAAT+TGG | - | 21206:5595-5614 | MS.gene41439:CDS | 60.0% | |
| GGACTTGGACCCTCCATCTC+TGG | - | 21206:6079-6098 | MS.gene41439:intron | 60.0% | |
| GGAGAAGAGCGAAACGACGC+TGG | - | 21206:3769-3788 | MS.gene41439:CDS | 60.0% | |
| GGAGGCAAATCCGACGGTGT+CGG | + | 21206:3914-3933 | MS.gene41439:intergenic | 60.0% | |
| GTACGACGGACCTCCACATG+CGG | + | 21206:3837-3856 | MS.gene41439:intergenic | 60.0% | |
| GTTCTCTGCTGCTGCCACTG+TGG | + | 21206:3998-4017 | MS.gene41439:intergenic | 60.0% | |
| TCTACGACCTCCGACACCGT+CGG | - | 21206:3901-3920 | MS.gene41439:CDS | 60.0% | |
| TGGCCCCGTGAGCTTAGCTT+TGG | - | 21206:4288-4307 | MS.gene41439:intron | 60.0% | |
| TGTGACAGTGACTGCGGCGT+CGG | + | 21206:3875-3894 | MS.gene41439:intergenic | 60.0% | |
| TGTTTCCACGGCCGTCTCAC+TGG | + | 21206:3968-3987 | MS.gene41439:intergenic | 60.0% | |
| TTGGATTTCGCCGCCGCATG+TGG | - | 21206:3821-3840 | MS.gene41439:CDS | 60.0% | |
| ! | CGGTGTCGGAGGTCGTAGAA+TGG | + | 21206:3900-3919 | MS.gene41439:intergenic | 60.0% |
| AGTCACCAGTGAGACGGCCG+TGG | - | 21206:3960-3979 | MS.gene41439:intron | 65.0% | |
| CTCTGCTGCTGCCACTGTGG+TGG | + | 21206:3995-4014 | MS.gene41439:intergenic | 65.0% | |
| GATTTCGCCGCCGCATGTGG+AGG | - | 21206:3824-3843 | MS.gene41439:CDS | 65.0% | |
| GCCGGAGGAGGCAAATCCGA+CGG | + | 21206:3920-3939 | MS.gene41439:intergenic | 65.0% | |
| ! | GCGTCGGTGGCGACAATGTC+AGG | + | 21206:3859-3878 | MS.gene41439:intergenic | 65.0% |
| ! | GGCAAATCCGACGGTGTCGG+AGG | + | 21206:3911-3930 | MS.gene41439:intergenic | 65.0% |
| CGACGGACCTCCACATGCGG+CGG | + | 21206:3834-3853 | MS.gene41439:intergenic | 70.0% | |
| ! | GACAGTGACTGCGGCGTCGG+TGG | + | 21206:3872-3891 | MS.gene41439:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 21206 | gene | 3767 | 9198 | 3767 | ID=MS.gene41439 |
| 21206 | mRNA | 3767 | 9198 | 3767 | ID=MS.gene41439.t1;Parent=MS.gene41439 |
| 21206 | exon | 8831 | 9198 | 8831 | ID=MS.gene41439.t1.exon1;Parent=MS.gene41439.t1 |
| 21206 | CDS | 8831 | 9198 | 8831 | ID=cds.MS.gene41439.t1;Parent=MS.gene41439.t1 |
| 21206 | exon | 7552 | 7662 | 7552 | ID=MS.gene41439.t1.exon2;Parent=MS.gene41439.t1 |
| 21206 | CDS | 7552 | 7662 | 7552 | ID=cds.MS.gene41439.t1;Parent=MS.gene41439.t1 |
| 21206 | exon | 7272 | 7449 | 7272 | ID=MS.gene41439.t1.exon3;Parent=MS.gene41439.t1 |
| 21206 | CDS | 7272 | 7449 | 7272 | ID=cds.MS.gene41439.t1;Parent=MS.gene41439.t1 |
| 21206 | exon | 6767 | 7123 | 6767 | ID=MS.gene41439.t1.exon4;Parent=MS.gene41439.t1 |
| 21206 | CDS | 6767 | 7123 | 6767 | ID=cds.MS.gene41439.t1;Parent=MS.gene41439.t1 |
| 21206 | exon | 6358 | 6449 | 6358 | ID=MS.gene41439.t1.exon5;Parent=MS.gene41439.t1 |
| 21206 | CDS | 6358 | 6449 | 6358 | ID=cds.MS.gene41439.t1;Parent=MS.gene41439.t1 |
| 21206 | exon | 6165 | 6259 | 6165 | ID=MS.gene41439.t1.exon6;Parent=MS.gene41439.t1 |
| 21206 | CDS | 6165 | 6259 | 6165 | ID=cds.MS.gene41439.t1;Parent=MS.gene41439.t1 |
| 21206 | exon | 5497 | 5889 | 5497 | ID=MS.gene41439.t1.exon7;Parent=MS.gene41439.t1 |
| 21206 | CDS | 5497 | 5889 | 5497 | ID=cds.MS.gene41439.t1;Parent=MS.gene41439.t1 |
| 21206 | exon | 3767 | 3963 | 3767 | ID=MS.gene41439.t1.exon8;Parent=MS.gene41439.t1 |
| 21206 | CDS | 3767 | 3963 | 3767 | ID=cds.MS.gene41439.t1;Parent=MS.gene41439.t1 |
| Gene Sequence |
| Protein sequence |
