Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41462.t1 | XP_013460465.1 | 96.5 | 748 | 26 | 0 | 1 | 748 | 164 | 911 | 0.00E+00 | 1415.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41462.t1 | Q8W4L5 | 56.8 | 567 | 208 | 10 | 59 | 621 | 182 | 715 | 3.9e-155 | 550.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41462.t1 | A0A072UZF3 | 96.5 | 748 | 26 | 0 | 1 | 748 | 164 | 911 | 0.0e+00 | 1415.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene41462.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41462.t1 | MTR_3g467380 | 96.524 | 748 | 26 | 0 | 1 | 748 | 164 | 911 | 0.0 | 1484 |
| MS.gene41462.t1 | MTR_4g028130 | 52.617 | 707 | 312 | 10 | 55 | 746 | 198 | 896 | 0.0 | 698 |
| MS.gene41462.t1 | MTR_4g028130 | 51.195 | 711 | 280 | 12 | 55 | 746 | 198 | 860 | 0.0 | 669 |
| MS.gene41462.t1 | MTR_5g075410 | 55.940 | 665 | 243 | 10 | 9 | 669 | 160 | 778 | 0.0 | 663 |
| MS.gene41462.t1 | MTR_4g028130 | 58.876 | 445 | 177 | 3 | 55 | 498 | 198 | 637 | 9.65e-178 | 523 |
| MS.gene41462.t1 | MTR_2g011940 | 46.252 | 627 | 273 | 8 | 60 | 665 | 225 | 808 | 6.56e-170 | 511 |
| MS.gene41462.t1 | MTR_2g011940 | 47.072 | 444 | 189 | 4 | 60 | 497 | 234 | 637 | 8.09e-124 | 384 |
| MS.gene41462.t1 | MTR_2g011940 | 47.072 | 444 | 189 | 4 | 60 | 497 | 234 | 637 | 1.67e-123 | 384 |
| MS.gene41462.t1 | MTR_7g073240 | 41.149 | 435 | 175 | 12 | 55 | 485 | 2 | 359 | 5.92e-94 | 297 |
| MS.gene41462.t1 | MTR_7g083700 | 40.777 | 103 | 60 | 1 | 175 | 276 | 126 | 228 | 1.51e-18 | 87.8 |
| MS.gene41462.t1 | MTR_7g059330 | 37.255 | 102 | 62 | 2 | 175 | 274 | 623 | 724 | 4.75e-16 | 82.8 |
| MS.gene41462.t1 | MTR_1g058350 | 36.364 | 165 | 80 | 9 | 156 | 306 | 54 | 207 | 4.96e-14 | 74.3 |
| MS.gene41462.t1 | MTR_7g117455 | 40.659 | 91 | 49 | 3 | 175 | 262 | 117 | 205 | 4.13e-13 | 72.8 |
| MS.gene41462.t1 | MTR_5g053920 | 38.000 | 100 | 49 | 3 | 174 | 262 | 193 | 290 | 8.00e-13 | 71.2 |
| MS.gene41462.t1 | MTR_8g023990 | 38.462 | 91 | 51 | 3 | 175 | 262 | 171 | 259 | 2.31e-12 | 70.5 |
| MS.gene41462.t1 | MTR_7g105370 | 35.338 | 133 | 79 | 5 | 180 | 308 | 65 | 194 | 4.17e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41462.t1 | AT2G30470 | 54.194 | 620 | 225 | 12 | 59 | 673 | 182 | 747 | 0.0 | 588 |
| MS.gene41462.t1 | AT4G32010 | 53.793 | 580 | 215 | 13 | 24 | 598 | 137 | 668 | 0.0 | 572 |
| MS.gene41462.t1 | AT4G32010 | 53.425 | 584 | 215 | 14 | 24 | 598 | 137 | 672 | 0.0 | 567 |
| MS.gene41462.t1 | AT4G21550 | 39.116 | 294 | 121 | 6 | 144 | 434 | 294 | 532 | 1.68e-54 | 197 |
| MS.gene41462.t1 | AT4G21550 | 38.944 | 303 | 128 | 5 | 144 | 444 | 294 | 541 | 4.69e-51 | 190 |
| MS.gene41462.t1 | AT4G21550 | 45.455 | 99 | 51 | 2 | 546 | 641 | 550 | 648 | 5.85e-12 | 69.7 |
| MS.gene41462.t1 | AT4G21550 | 38.686 | 274 | 111 | 5 | 144 | 415 | 294 | 512 | 2.24e-50 | 185 |
| MS.gene41462.t1 | AT3G26790 | 42.308 | 104 | 59 | 1 | 175 | 277 | 91 | 194 | 3.18e-20 | 92.8 |
| MS.gene41462.t1 | AT3G24650 | 39.216 | 102 | 60 | 2 | 175 | 274 | 571 | 672 | 3.08e-16 | 83.6 |
| MS.gene41462.t1 | AT1G13260 | 38.739 | 111 | 61 | 4 | 174 | 279 | 186 | 294 | 1.06e-14 | 76.6 |
| MS.gene41462.t1 | AT1G28300 | 43.023 | 86 | 48 | 1 | 175 | 259 | 170 | 255 | 1.97e-14 | 76.3 |
| MS.gene41462.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 175 | 275 | 37 | 142 | 2.20e-14 | 72.4 |
| MS.gene41462.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 175 | 275 | 37 | 142 | 2.20e-14 | 72.4 |
| MS.gene41462.t1 | AT4G01500 | 41.573 | 89 | 49 | 2 | 175 | 262 | 35 | 121 | 9.76e-14 | 73.6 |
| MS.gene41462.t1 | AT1G68840 | 41.935 | 93 | 47 | 3 | 175 | 262 | 187 | 277 | 1.25e-13 | 73.6 |
| MS.gene41462.t1 | AT1G68840 | 41.935 | 93 | 47 | 3 | 175 | 262 | 187 | 277 | 1.25e-13 | 73.6 |
| MS.gene41462.t1 | AT5G06250 | 29.384 | 211 | 121 | 8 | 164 | 355 | 37 | 238 | 4.83e-13 | 70.9 |
| MS.gene41462.t1 | AT5G06250 | 29.384 | 211 | 121 | 8 | 164 | 355 | 37 | 238 | 5.15e-13 | 70.5 |
| MS.gene41462.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 175 | 275 | 37 | 142 | 5.39e-13 | 69.7 |
| MS.gene41462.t1 | AT5G06250 | 29.384 | 211 | 121 | 8 | 164 | 355 | 37 | 238 | 5.72e-13 | 70.5 |
| MS.gene41462.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 175 | 275 | 37 | 142 | 7.84e-13 | 69.3 |
| MS.gene41462.t1 | AT3G61970 | 39.362 | 94 | 49 | 3 | 175 | 262 | 22 | 113 | 8.11e-13 | 70.5 |
| MS.gene41462.t1 | AT5G06250 | 32.877 | 146 | 79 | 5 | 164 | 295 | 37 | 177 | 8.11e-13 | 70.1 |
| MS.gene41462.t1 | AT2G46870 | 39.560 | 91 | 50 | 3 | 175 | 262 | 34 | 122 | 9.56e-13 | 70.5 |
| MS.gene41462.t1 | AT5G06250 | 32.877 | 146 | 79 | 5 | 164 | 295 | 37 | 177 | 1.17e-12 | 69.3 |
| MS.gene41462.t1 | AT1G01030 | 39.560 | 91 | 50 | 3 | 175 | 262 | 55 | 143 | 4.12e-12 | 68.6 |
| MS.gene41462.t1 | AT1G01030 | 39.560 | 91 | 50 | 3 | 175 | 262 | 55 | 143 | 4.48e-12 | 68.9 |
| MS.gene41462.t1 | AT1G25560 | 34.167 | 120 | 65 | 4 | 175 | 282 | 194 | 311 | 5.53e-12 | 68.6 |
| MS.gene41462.t1 | AT3G11580 | 38.235 | 102 | 47 | 3 | 175 | 262 | 28 | 127 | 1.38e-11 | 65.5 |
| MS.gene41462.t1 | AT3G11580 | 38.235 | 102 | 47 | 3 | 175 | 262 | 28 | 127 | 1.38e-11 | 65.5 |
| MS.gene41462.t1 | AT3G11580 | 38.235 | 102 | 47 | 3 | 175 | 262 | 28 | 127 | 1.38e-11 | 65.5 |
| MS.gene41462.t1 | AT3G11580 | 36.752 | 117 | 55 | 5 | 175 | 275 | 28 | 141 | 1.70e-11 | 65.9 |
Find 213 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTTCTTGGACCGCCATTT+TGG | 0.204307 | 3.1:+52136805 | None:intergenic |
| AACGGGGAACTTCGCTTAAA+TGG | 0.226581 | 3.1:-52139053 | MS.gene41462:CDS |
| CAAACCTCAGCACAGGCTTT+TGG | 0.237261 | 3.1:+52139960 | None:intergenic |
| AAAAGTAAGAGATTGCTTAT+TGG | 0.238596 | 3.1:-52138894 | MS.gene41462:CDS |
| ATGAATATAGAAACTGAAAA+AGG | 0.252818 | 3.1:-52140676 | MS.gene41462:CDS |
| AACAACATGATTACATCTAA+TGG | 0.257026 | 3.1:-52141018 | MS.gene41462:CDS |
| CAAAACTTAGTGATCATATA+TGG | 0.264606 | 3.1:-52136845 | MS.gene41462:CDS |
| ATCAGTTACTTCCTAGATAT+TGG | 0.275669 | 3.1:-52140600 | MS.gene41462:CDS |
| GATGTAATCATGTTGTTTAT+CGG | 0.277647 | 3.1:+52141024 | None:intergenic |
| GAACCTTCACATTTGGTTAC+TGG | 0.279558 | 3.1:-52139023 | MS.gene41462:CDS |
| AGCCAGAAGGCTCGTGTTCT+TGG | 0.294965 | 3.1:+52137315 | None:intergenic |
| CTCTGAAGGTCTTCCTTTGC+GGG | 0.296256 | 3.1:-52139754 | MS.gene41462:CDS |
| GGAAGGTCAACATTCTTCTT+TGG | 0.296343 | 3.1:-52136766 | MS.gene41462:CDS |
| TACATCCTGCTGTTGTTATT+AGG | 0.296564 | 3.1:+52139684 | None:intergenic |
| GGTTTGCTTAAAGCCGAAAA+TGG | 0.299412 | 3.1:-52138993 | MS.gene41462:CDS |
| GGCCCTGCTGATTCCGCAGC+TGG | 0.302776 | 3.1:-52137248 | MS.gene41462:CDS |
| TTCTCCTAAAACGGCTAAAC+TGG | 0.304782 | 3.1:+52137280 | None:intergenic |
| ATCTTCAGCGCCTCTTCATC+TGG | 0.309531 | 3.1:-52138566 | MS.gene41462:CDS |
| TCTACGTCTGCACTTTCTAA+TGG | 0.313577 | 3.1:-52139167 | MS.gene41462:CDS |
| ATTTCAGTATTAACGGTTCT+TGG | 0.327294 | 3.1:+52136792 | None:intergenic |
| TAGATATTGGCCTAGGATTA+CGG | 0.327990 | 3.1:-52140587 | MS.gene41462:CDS |
| TATTGGTAATGATGATTCTA+TGG | 0.330411 | 3.1:-52138877 | MS.gene41462:CDS |
| CATATTAATATGAACCAAAA+TGG | 0.335008 | 3.1:-52136819 | MS.gene41462:CDS |
| GCCGTCTTTGAATATGTGTT+TGG | 0.340861 | 3.1:-52140842 | MS.gene41462:CDS |
| TCTTTGGCCACTCAATCTAA+TGG | 0.347543 | 3.1:-52136750 | MS.gene41462:CDS |
| ATCCAAGAACACGAGCCTTC+TGG | 0.347833 | 3.1:-52137317 | MS.gene41462:CDS |
| CTCTAAATGGAGAAAGTTAC+CGG | 0.350506 | 3.1:-52137813 | MS.gene41462:CDS |
| AAGGCCGGTCTTTAACAGTT+TGG | 0.353568 | 3.1:+52140702 | None:intergenic |
| AAGAAGTTAGGCCGTCATTC+AGG | 0.358196 | 3.1:-52140984 | MS.gene41462:CDS |
| ATTCATTACCCTTCACATCT+TGG | 0.362672 | 3.1:+52139730 | None:intergenic |
| CGAGCTGAGCTCAAGGGAAT+TGG | 0.363584 | 3.1:-52137603 | MS.gene41462:CDS |
| TTCCTGCATTTCAGTATTAA+CGG | 0.365173 | 3.1:+52136785 | None:intergenic |
| CAGGAGCTGGAGCGTTTGTC+TGG | 0.368698 | 3.1:-52140562 | MS.gene41462:CDS |
| AATGTGATGATTGCTCTAAA+TGG | 0.377625 | 3.1:-52137826 | MS.gene41462:CDS |
| AAGAAGAGGACTCGAAATAT+TGG | 0.381088 | 3.1:-52138921 | MS.gene41462:CDS |
| AGGCCGGTCTTTAACAGTTT+GGG | 0.381417 | 3.1:+52140703 | None:intergenic |
| TCCGTTCACCAAATGGTAAC+GGG | 0.384737 | 3.1:-52139070 | MS.gene41462:CDS |
| GGACATGTTCGGAAAATGTC+TGG | 0.386985 | 3.1:-52137766 | MS.gene41462:CDS |
| CGAAGTTCCCCGTTACCATT+TGG | 0.389637 | 3.1:+52139062 | None:intergenic |
| GCTCCAGCTGCGGAATCAGC+AGG | 0.391479 | 3.1:+52137245 | None:intergenic |
| TCATTCAGGGAAGGGGATAC+TGG | 0.395233 | 3.1:-52140970 | MS.gene41462:CDS |
| CCGTCTTTGAATATGTGTTT+GGG | 0.395837 | 3.1:-52140841 | MS.gene41462:CDS |
| ACAACATGATTACATCTAAT+GGG | 0.396289 | 3.1:-52141017 | MS.gene41462:CDS |
| AAGAGAAGTTGCGAATCCTT+TGG | 0.400555 | 3.1:-52136979 | MS.gene41462:CDS |
| ACATCCCGAACCTTCACATT+TGG | 0.405564 | 3.1:-52139030 | MS.gene41462:CDS |
| GATTTACGTGCTGGTGATAC+TGG | 0.406488 | 3.1:-52139624 | MS.gene41462:intron |
| ACTCTGAAGGTCTTCCTTTG+CGG | 0.407452 | 3.1:-52139755 | MS.gene41462:CDS |
| TCTTTCTTTGTTCCCAACAT+TGG | 0.407495 | 3.1:+52136686 | None:intergenic |
| TCCCTTGAGCTCAGCTCGTC+CGG | 0.408864 | 3.1:+52137608 | None:intergenic |
| TTTAACAGTTTGGGAAGTAT+AGG | 0.414755 | 3.1:+52140712 | None:intergenic |
| ATTCAGCCACCAAGCGGAAA+AGG | 0.418817 | 3.1:-52137173 | MS.gene41462:CDS |
| CCACGTATTGCTCGGCCTCC+TGG | 0.420064 | 3.1:-52140640 | MS.gene41462:CDS |
| GACAATGCTTGGCTTGACAC+TGG | 0.420212 | 3.1:+52138806 | None:intergenic |
| TCCTCGATTGTGACAATGCT+TGG | 0.425047 | 3.1:+52138795 | None:intergenic |
| ATGTGTTTGGGAAACCCGTC+AGG | 0.426949 | 3.1:-52140829 | MS.gene41462:CDS |
| ATTGCTCGGCCTCCTGGTGA+TGG | 0.435069 | 3.1:-52140634 | MS.gene41462:CDS |
| AGTAACCAAATGTGAAGGTT+CGG | 0.436712 | 3.1:+52139025 | None:intergenic |
| ACATTTAGTCGGATAGATCC+TGG | 0.438208 | 3.1:-52139359 | MS.gene41462:CDS |
| GTAACCAAATGTGAAGGTTC+GGG | 0.441449 | 3.1:+52139026 | None:intergenic |
| TCCTCCCAAGTGGACATGTT+CGG | 0.442585 | 3.1:-52137777 | MS.gene41462:CDS |
| ATTCTCATTTCCACCAGAAA+AGG | 0.447087 | 3.1:+52139124 | None:intergenic |
| TCGGCCTCCTGGTGATGGGA+GGG | 0.451096 | 3.1:-52140629 | MS.gene41462:CDS |
| ACCAATCCGACCTGCATCAC+TGG | 0.451773 | 3.1:+52139995 | None:intergenic |
| GGGTGTGACCCCTTGTATAC+AGG | 0.451818 | 3.1:-52139652 | MS.gene41462:CDS |
| GGAAGTATAGGACGAGATCT+TGG | 0.452625 | 3.1:+52140724 | None:intergenic |
| AACAACTCTTTCCCACCATC+TGG | 0.452851 | 3.1:-52140805 | MS.gene41462:CDS |
| CGGCCTCCTGGTGATGGGAG+GGG | 0.454483 | 3.1:-52140628 | MS.gene41462:CDS |
| GCAAAAGTTAATGACTGAAC+AGG | 0.455178 | 3.1:+52140925 | None:intergenic |
| TTCTAATGGCGGTTCGGCAA+AGG | 0.457309 | 3.1:-52139153 | MS.gene41462:CDS |
| AAATCCATGGCCTGTATACA+AGG | 0.462450 | 3.1:+52139642 | None:intergenic |
| TTCTATATTCATGGTAAGGC+CGG | 0.462900 | 3.1:+52140687 | None:intergenic |
| CACCGGACGAGCTGAGCTCA+AGG | 0.468536 | 3.1:-52137610 | MS.gene41462:CDS |
| CAGTTTCTATATTCATGGTA+AGG | 0.468963 | 3.1:+52140683 | None:intergenic |
| TTCTCTTGATGCTCCACCAT+TGG | 0.470671 | 3.1:+52136995 | None:intergenic |
| CTCGGCCTCCTGGTGATGGG+AGG | 0.470919 | 3.1:-52140630 | MS.gene41462:CDS |
| TCTAATGGCGGTTCGGCAAA+GGG | 0.472103 | 3.1:-52139152 | MS.gene41462:CDS |
| TAGGATTACGGACCAGGAGC+TGG | 0.472738 | 3.1:-52140575 | MS.gene41462:CDS |
| AAGATCTATCTTTCCAGCGC+TGG | 0.475080 | 3.1:+52136911 | None:intergenic |
| GATGCATTGCATCCAATGTT+GGG | 0.477504 | 3.1:-52136698 | MS.gene41462:CDS |
| GGAAAGAGTTGTTCCCTGAC+GGG | 0.480170 | 3.1:+52140815 | None:intergenic |
| GATCTTCTCCGTTCACCAAA+TGG | 0.483108 | 3.1:-52139077 | MS.gene41462:CDS |
| CTATGGAGTTGAGACTTACA+TGG | 0.484609 | 3.1:-52138860 | MS.gene41462:CDS |
| AGAAGTTAGGCCGTCATTCA+GGG | 0.485967 | 3.1:-52140983 | MS.gene41462:CDS |
| CCTTCAGAGTGTGTAATATG+AGG | 0.486209 | 3.1:+52139768 | None:intergenic |
| CACTTGCGAGTCATCGCGAT+TGG | 0.487038 | 3.1:+52136878 | None:intergenic |
| CTTGGCTTGACACTGGGCGG+TGG | 0.487076 | 3.1:+52138813 | None:intergenic |
| CCCCGTTACCATTTGGTGAA+CGG | 0.487521 | 3.1:+52139069 | None:intergenic |
| CAACAGCAGGATGTACGTAT+TGG | 0.488320 | 3.1:-52139676 | MS.gene41462:CDS |
| GTGCTGAGTGCCAGTGATGC+AGG | 0.488585 | 3.1:-52140005 | MS.gene41462:CDS |
| AATGACATGCAATAATTCAC+TGG | 0.490207 | 3.1:-52138967 | MS.gene41462:CDS |
| AACTATTTCGTCCAGGGTGA+AGG | 0.490506 | 3.1:-52137861 | MS.gene41462:intron |
| TACTTCCTAGATATTGGCCT+AGG | 0.490891 | 3.1:-52140594 | MS.gene41462:CDS |
| ATTAAATCATTCAAATGAAA+GGG | 0.491557 | 3.1:-52136652 | MS.gene41462:CDS |
| TGCACTTTCTAATGGCGGTT+CGG | 0.491976 | 3.1:-52139159 | MS.gene41462:CDS |
| CAGACAAACGCTCCAGCTCC+TGG | 0.495028 | 3.1:+52140563 | None:intergenic |
| AACCGTTAATACTGAAATGC+AGG | 0.496893 | 3.1:-52136787 | MS.gene41462:CDS |
| GAACAGCCGGGACGGTGTCT+AGG | 0.499276 | 3.1:+52137209 | None:intergenic |
| TTCAGCCACCAAGCGGAAAA+GGG | 0.500074 | 3.1:-52137172 | MS.gene41462:CDS |
| CTCAGCACCTTCTCAAACAA+TGG | 0.504763 | 3.1:+52140020 | None:intergenic |
| AAAACTTAGTGATCATATAT+GGG | 0.505964 | 3.1:-52136844 | MS.gene41462:CDS |
| GGGAAAGAGTTGTTCCCTGA+CGG | 0.506096 | 3.1:+52140814 | None:intergenic |
| GATCTTGGCCCTTGATGAAA+GGG | 0.508943 | 3.1:+52140739 | None:intergenic |
| TATTAAATCATTCAAATGAA+AGG | 0.509978 | 3.1:-52136653 | MS.gene41462:CDS |
| TTGCTCGGCCTCCTGGTGAT+GGG | 0.511113 | 3.1:-52140633 | MS.gene41462:CDS |
| TTCTTACCCCTCCCATCACC+AGG | 0.513704 | 3.1:+52140622 | None:intergenic |
| ATTCAGCTTCAGAGAAGAAG+AGG | 0.515423 | 3.1:-52138935 | MS.gene41462:CDS |
| CAGATCTTCATGTTCTGCAC+CGG | 0.515672 | 3.1:-52137627 | MS.gene41462:CDS |
| ACTACAGACGGAAGACTTGA+GGG | 0.517542 | 3.1:-52140775 | MS.gene41462:CDS |
| GCCAGTGATGCAGGTCGGAT+TGG | 0.520413 | 3.1:-52139996 | MS.gene41462:CDS |
| GTAATCCTAGGCCAATATCT+AGG | 0.520534 | 3.1:+52140589 | None:intergenic |
| GTAACCAACCTGTGTGTCTA+CGG | 0.523912 | 3.1:+52139298 | None:intergenic |
| TTTGGCCTAATAACAACAGC+AGG | 0.525991 | 3.1:-52139689 | MS.gene41462:CDS |
| TTGGCCTAGGATTACGGACC+AGG | 0.525994 | 3.1:-52140581 | MS.gene41462:CDS |
| ACAATGCTTGGCTTGACACT+GGG | 0.526210 | 3.1:+52138807 | None:intergenic |
| CATTTAGTCGGATAGATCCT+GGG | 0.527144 | 3.1:-52139358 | MS.gene41462:CDS |
| ATGCTCTTCTTCCTCCCAAG+TGG | 0.528369 | 3.1:-52137787 | MS.gene41462:CDS |
| AGAAAATAATAGACCAGCAT+GGG | 0.528624 | 3.1:-52140896 | MS.gene41462:CDS |
| GCACACAATACAAGAACAGC+CGG | 0.529568 | 3.1:+52137196 | None:intergenic |
| AAGATGTGAAGGGTAATGAA+TGG | 0.530191 | 3.1:-52139728 | MS.gene41462:CDS |
| AGATGCATTGCATCCAATGT+TGG | 0.530925 | 3.1:-52136699 | MS.gene41462:CDS |
| AACGAAGGAGGACTAAATAG+AGG | 0.534232 | 3.1:-52136954 | MS.gene41462:CDS |
| GGATGCAATGCATCTTTCAT+CGG | 0.534582 | 3.1:+52136707 | None:intergenic |
| AGATCTTGGCCCTTGATGAA+AGG | 0.535728 | 3.1:+52140738 | None:intergenic |
| AGCTCCTGGTCCGTAATCCT+AGG | 0.537010 | 3.1:+52140577 | None:intergenic |
| TTTCTCAACCACGTATTGCT+CGG | 0.537803 | 3.1:-52140648 | MS.gene41462:CDS |
| CTCCGTTCACCAAATGGTAA+CGG | 0.539360 | 3.1:-52139071 | MS.gene41462:CDS |
| GACCCCTTGTATACAGGCCA+TGG | 0.540366 | 3.1:-52139646 | MS.gene41462:CDS |
| GAGGTTGGCGAGTCCAGCGC+TGG | 0.541207 | 3.1:-52136924 | MS.gene41462:CDS |
| CAGCAGGATGTACGTATTGG+AGG | 0.545399 | 3.1:-52139673 | MS.gene41462:CDS |
| CAGGCCATGGATTTACGTGC+TGG | 0.546070 | 3.1:-52139633 | MS.gene41462:CDS |
| GACTACAGACGGAAGACTTG+AGG | 0.549307 | 3.1:-52140776 | MS.gene41462:CDS |
| GGAAATGAGAATCTTCCATC+GGG | 0.550758 | 3.1:-52139113 | MS.gene41462:CDS |
| ACTTGCGAGTCATCGCGATT+GGG | 0.551611 | 3.1:+52136879 | None:intergenic |
| GTATCTCCTCCCTTTCATCA+AGG | 0.552113 | 3.1:-52140748 | MS.gene41462:CDS |
| GGAGGAAGAAGAGCATCAAC+CGG | 0.553613 | 3.1:+52137794 | None:intergenic |
| AACTCTTTCCCACCATCTGG+TGG | 0.563581 | 3.1:-52140802 | MS.gene41462:CDS |
| TCTTCAGCGCCTCTTCATCT+GGG | 0.569422 | 3.1:-52138565 | MS.gene41462:intron |
| CCTCATATTACACACTCTGA+AGG | 0.570324 | 3.1:-52139768 | MS.gene41462:CDS |
| AAAATGTCTGGGATACAAGC+AGG | 0.570539 | 3.1:-52137754 | MS.gene41462:intron |
| ATCCTCACCATTAGATTGAG+TGG | 0.573526 | 3.1:+52136743 | None:intergenic |
| TCTGTAGTCTCTCCACCAGA+TGG | 0.577437 | 3.1:+52140790 | None:intergenic |
| TAGAAAATAATAGACCAGCA+TGG | 0.580283 | 3.1:-52140897 | MS.gene41462:CDS |
| GAACAAAGAAAGAAGAGATG+AGG | 0.583288 | 3.1:-52136676 | MS.gene41462:CDS |
| AGTAGTGCCATTGTTTGAGA+AGG | 0.585604 | 3.1:-52140027 | MS.gene41462:CDS |
| TATCTCCTCCCTTTCATCAA+GGG | 0.585643 | 3.1:-52140747 | MS.gene41462:CDS |
| TTTCGTGGTGGCTCCAGCTG+CGG | 0.585946 | 3.1:+52137235 | None:intergenic |
| GACATGTTCGGAAAATGTCT+GGG | 0.586198 | 3.1:-52137765 | MS.gene41462:CDS |
| TAGGCCGTCATTCAGGGAAG+GGG | 0.586518 | 3.1:-52140977 | MS.gene41462:CDS |
| TTCACATCTTGGACCCGCAA+AGG | 0.587006 | 3.1:+52139741 | None:intergenic |
| CACACGTTGCAAGTACATGT+TGG | 0.588233 | 3.1:+52137140 | None:intergenic |
| AATAGAGGTCAAGTTGAGGT+TGG | 0.588262 | 3.1:-52136939 | MS.gene41462:CDS |
| TTTGCGGGTCCAAGATGTGA+AGG | 0.588681 | 3.1:-52139739 | MS.gene41462:CDS |
| TCTCCCAAAAGCCTGTGCTG+AGG | 0.589766 | 3.1:-52139964 | MS.gene41462:intron |
| TTAGGCCGTCATTCAGGGAA+GGG | 0.591509 | 3.1:-52140978 | MS.gene41462:CDS |
| CTTCCCAAACTGTTAAAGAC+CGG | 0.592604 | 3.1:-52140706 | MS.gene41462:CDS |
| CATTTGGTTACTGGACCCGC+TGG | 0.592726 | 3.1:-52139014 | MS.gene41462:CDS |
| ATCAAATTCCGTAGACACAC+AGG | 0.593716 | 3.1:-52139306 | MS.gene41462:intron |
| CCCAAACACATATTCAAAGA+CGG | 0.594377 | 3.1:+52140841 | None:intergenic |
| GTAGTCTCTCCACCAGATGG+TGG | 0.595253 | 3.1:+52140793 | None:intergenic |
| TCCGAACATGTCCACTTGGG+AGG | 0.595376 | 3.1:+52137776 | None:intergenic |
| ACGTCTGCACTTTCTAATGG+CGG | 0.598708 | 3.1:-52139164 | MS.gene41462:CDS |
| ATTTGGTGAACGGAGAAGAT+CGG | 0.599027 | 3.1:+52139079 | None:intergenic |
| ATCACCAGCACGTAAATCCA+TGG | 0.602400 | 3.1:+52139629 | None:intergenic |
| CTCCAGCTGCGGAATCAGCA+GGG | 0.603654 | 3.1:+52137246 | None:intergenic |
| GGACTCTTACCCAGATGAAG+AGG | 0.605539 | 3.1:+52138556 | None:intergenic |
| AGGGAAAAGAATCTGTCTTG+AGG | 0.606593 | 3.1:-52136633 | None:intergenic |
| GTTAGGCCGTCATTCAGGGA+AGG | 0.607605 | 3.1:-52140979 | MS.gene41462:CDS |
| CAATCGCGATGACTCGCAAG+TGG | 0.610051 | 3.1:-52136877 | MS.gene41462:CDS |
| TGGAAATGAGAATCTTCCAT+CGG | 0.610250 | 3.1:-52139114 | MS.gene41462:CDS |
| ACCGGACGAGCTGAGCTCAA+GGG | 0.610258 | 3.1:-52137609 | MS.gene41462:CDS |
| GTCCAGGGTGAAGGAACAGT+GGG | 0.610789 | 3.1:-52137852 | MS.gene41462:intron |
| ATTTAGTCGGATAGATCCTG+GGG | 0.615648 | 3.1:-52139357 | MS.gene41462:CDS |
| ACGGTGTCTAGGATGTTTCG+TGG | 0.616806 | 3.1:+52137220 | None:intergenic |
| TAGTCTCTCCACCAGATGGT+GGG | 0.617495 | 3.1:+52140794 | None:intergenic |
| GGCCACTCAATCTAATGGTG+AGG | 0.620775 | 3.1:-52136745 | MS.gene41462:CDS |
| AGCAGGATGTACGTATTGGA+GGG | 0.621631 | 3.1:-52139672 | MS.gene41462:CDS |
| CAATACAAGAACAGCCGGGA+CGG | 0.625906 | 3.1:+52137201 | None:intergenic |
| TATGGAGTTGAGACTTACAT+GGG | 0.625949 | 3.1:-52138859 | MS.gene41462:CDS |
| TGTGTACGACCGTGAAGCGT+CGG | 0.626839 | 3.1:-52137121 | MS.gene41462:CDS |
| GCGAATCCTTTGGAAAACGA+AGG | 0.630328 | 3.1:-52136969 | MS.gene41462:CDS |
| CTTGGCCCTTGATGAAAGGG+AGG | 0.637510 | 3.1:+52140742 | None:intergenic |
| CGTCCAGGGTGAAGGAACAG+TGG | 0.639116 | 3.1:-52137853 | MS.gene41462:intron |
| TCGGCTTTAAGCAAACCAGC+GGG | 0.639499 | 3.1:+52138999 | None:intergenic |
| GCGAGAGCGTCTAAGCCAGA+AGG | 0.639894 | 3.1:+52137302 | None:intergenic |
| ATCCATGGCCTGTATACAAG+GGG | 0.641805 | 3.1:+52139644 | None:intergenic |
| CCAGGAGGCCGAGCAATACG+TGG | 0.643456 | 3.1:+52140640 | None:intergenic |
| TTCGGCTTTAAGCAAACCAG+CGG | 0.645112 | 3.1:+52138998 | None:intergenic |
| GACGAGTCAGATACCAATGG+TGG | 0.646113 | 3.1:-52137008 | MS.gene41462:CDS |
| TCGGCACAATTACTTCCCGA+TGG | 0.647760 | 3.1:+52139098 | None:intergenic |
| AATCCTTTGGAAAACGAAGG+AGG | 0.647862 | 3.1:-52136966 | MS.gene41462:CDS |
| AATCCATGGCCTGTATACAA+GGG | 0.649731 | 3.1:+52139643 | None:intergenic |
| ATGCTTGGCTTGACACTGGG+CGG | 0.650343 | 3.1:+52138810 | None:intergenic |
| GTATCCCCTTCCCTGAATGA+CGG | 0.651045 | 3.1:+52140973 | None:intergenic |
| AAAGTTAATGACTGAACAGG+CGG | 0.651260 | 3.1:+52140928 | None:intergenic |
| GCCAAGCATTGTCACAATCG+AGG | 0.658300 | 3.1:-52138796 | MS.gene41462:CDS |
| ATTAATATGAACCAAAATGG+CGG | 0.658414 | 3.1:-52136816 | MS.gene41462:CDS |
| ACTAAATAGAGGTCAAGTTG+AGG | 0.658544 | 3.1:-52136943 | MS.gene41462:CDS |
| GGTCCAGTAACCAAATGTGA+AGG | 0.661076 | 3.1:+52139020 | None:intergenic |
| CTCAAACAATGGCACTACTG+TGG | 0.661874 | 3.1:+52140031 | None:intergenic |
| GTTAATACTGAAATGCAGGA+AGG | 0.667799 | 3.1:-52136783 | MS.gene41462:CDS |
| AAACATCCTAGACACCGTCC+CGG | 0.669264 | 3.1:-52137215 | MS.gene41462:CDS |
| TCTGGTGGAGAGACTACAGA+CGG | 0.671314 | 3.1:-52140787 | MS.gene41462:CDS |
| TGTGTTTGGGAAACCCGTCA+GGG | 0.671474 | 3.1:-52140828 | MS.gene41462:CDS |
| GCATGCATGAATCAAATGCG+AGG | 0.672254 | 3.1:-52140864 | MS.gene41462:CDS |
| CCGTTCACCAAATGGTAACG+GGG | 0.672434 | 3.1:-52139069 | MS.gene41462:CDS |
| TTGCGGGTCCAAGATGTGAA+GGG | 0.674468 | 3.1:-52139738 | MS.gene41462:CDS |
| GTGTGCATTCAGCCACCAAG+CGG | 0.679152 | 3.1:-52137179 | MS.gene41462:CDS |
| CACACAATACAAGAACAGCC+GGG | 0.682528 | 3.1:+52137197 | None:intergenic |
| GTTGACGAGTCAGATACCAA+TGG | 0.701417 | 3.1:-52137011 | MS.gene41462:CDS |
| TGAGTGCCAGTGATGCAGGT+CGG | 0.705207 | 3.1:-52140001 | MS.gene41462:CDS |
| GTGTCTAGGATGTTTCGTGG+TGG | 0.708007 | 3.1:+52137223 | None:intergenic |
| TTACCCCTCCCATCACCAGG+AGG | 0.730237 | 3.1:+52140625 | None:intergenic |
| TTTAGTCGGATAGATCCTGG+GGG | 0.790573 | 3.1:-52139356 | MS.gene41462:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAAATTTCAGTATAA+AGG | + | chr3.1:52137142-52137161 | None:intergenic | 10.0% |
| !! | ATTAAATCATTCAAATGAAA+GGG | - | chr3.1:52141019-52141038 | MS.gene41462:CDS | 15.0% |
| !! | ATTAATACGATAATAATCAA+CGG | + | chr3.1:52137254-52137273 | None:intergenic | 15.0% |
| !! | TATTAAATCATTCAAATGAA+AGG | - | chr3.1:52141018-52141037 | MS.gene41462:CDS | 15.0% |
| !! | TTAAAACGAGTTATTAAATA+GGG | - | chr3.1:52137481-52137500 | MS.gene41462:intron | 15.0% |
| !!! | ACTGAAATTTATAATTTTAG+AGG | - | chr3.1:52137146-52137165 | MS.gene41462:CDS | 15.0% |
| !!! | CTGAAATTTATAATTTTAGA+GGG | - | chr3.1:52137147-52137166 | MS.gene41462:CDS | 15.0% |
| !!! | TTTAAAACGAGTTATTAAAT+AGG | - | chr3.1:52137480-52137499 | MS.gene41462:intron | 15.0% |
| !!! | TTTAAAATTTATGAAGTTTG+TGG | - | chr3.1:52137400-52137419 | MS.gene41462:intron | 15.0% |
| !! | AAAACTTAGTGATCATATAT+GGG | - | chr3.1:52140827-52140846 | MS.gene41462:CDS | 20.0% |
| !! | ATGAATATAGAAACTGAAAA+AGG | - | chr3.1:52136995-52137014 | MS.gene41462:CDS | 20.0% |
| !! | CATATTAATATGAACCAAAA+TGG | - | chr3.1:52140852-52140871 | MS.gene41462:CDS | 20.0% |
| !! | CATTCAGATAAAGATAAAAA+AGG | + | chr3.1:52137778-52137797 | None:intergenic | 20.0% |
| !! | CGGCTATTATTTAAATAAAT+AGG | - | chr3.1:52138476-52138495 | MS.gene41462:intron | 20.0% |
| !! | GTTGCATTCATAATATTATT+TGG | - | chr3.1:52140178-52140197 | MS.gene41462:intron | 20.0% |
| !! | TAAAGATAAAAAAGGAAACA+CGG | + | chr3.1:52137770-52137789 | None:intergenic | 20.0% |
| !! | TGAATATAGAAACTGAAAAA+GGG | - | chr3.1:52136996-52137015 | MS.gene41462:CDS | 20.0% |
| !! | TTCTGATTTATATGAAACTT+TGG | + | chr3.1:52137287-52137306 | None:intergenic | 20.0% |
| !! | TTTGTTTATTAGCTATTGTA+AGG | - | chr3.1:52138965-52138984 | MS.gene41462:CDS | 20.0% |
| !!! | AATAAGAGCATTTAATTTGA+TGG | - | chr3.1:52137436-52137455 | MS.gene41462:intron | 20.0% |
| !!! | ACATCTTTACTTTTTGTTTT+TGG | - | chr3.1:52138440-52138459 | MS.gene41462:intron | 20.0% |
| !!! | TTTTTCAGTTTCTATATTCA+TGG | + | chr3.1:52136996-52137015 | None:intergenic | 20.0% |
| !!! | TTTTTGGTGAATATGATTAA+CGG | - | chr3.1:52138456-52138475 | MS.gene41462:intron | 20.0% |
| ! | AAAAGTAAGAGATTGCTTAT+TGG | - | chr3.1:52138777-52138796 | MS.gene41462:CDS | 25.0% |
| ! | AACAACATGATTACATCTAA+TGG | - | chr3.1:52136653-52136672 | MS.gene41462:CDS | 25.0% |
| ! | AAGAACTATAAATTATGAGC+AGG | + | chr3.1:52137544-52137563 | None:intergenic | 25.0% |
| ! | ACAACATGATTACATCTAAT+GGG | - | chr3.1:52136654-52136673 | MS.gene41462:CDS | 25.0% |
| ! | AGAACTATAAATTATGAGCA+GGG | + | chr3.1:52137543-52137562 | None:intergenic | 25.0% |
| ! | ATAATTCGAAGAAAATACCA+TGG | + | chr3.1:52138420-52138439 | None:intergenic | 25.0% |
| ! | ATCCAAATATGCAAAAAGTT+TGG | + | chr3.1:52139139-52139158 | None:intergenic | 25.0% |
| ! | ATTAAATGCTCTTATTGAGT+AGG | + | chr3.1:52137432-52137451 | None:intergenic | 25.0% |
| ! | ATTAATATGAACCAAAATGG+CGG | - | chr3.1:52140855-52140874 | MS.gene41462:CDS | 25.0% |
| ! | CAAAACTTAGTGATCATATA+TGG | - | chr3.1:52140826-52140845 | MS.gene41462:CDS | 25.0% |
| ! | CAAAGATCTTATCAAAAACA+TGG | + | chr3.1:52140133-52140152 | None:intergenic | 25.0% |
| ! | GATTTATATGAAACTTTGGA+TGG | + | chr3.1:52137283-52137302 | None:intergenic | 25.0% |
| ! | GGTAATACTGGTATTATTAA+TGG | + | chr3.1:52139947-52139966 | None:intergenic | 25.0% |
| ! | GTAACAGATCAATTCTATAA+GGG | + | chr3.1:52138177-52138196 | None:intergenic | 25.0% |
| ! | TATAAGTGCTTATGTATGAT+TGG | - | chr3.1:52139508-52139527 | MS.gene41462:intron | 25.0% |
| ! | TATCTTTATCTGAATGAGTA+TGG | - | chr3.1:52137782-52137801 | MS.gene41462:CDS | 25.0% |
| ! | TATTCTAGATACAACTAACA+TGG | + | chr3.1:52139470-52139489 | None:intergenic | 25.0% |
| ! | TGTAACAGATCAATTCTATA+AGG | + | chr3.1:52138178-52138197 | None:intergenic | 25.0% |
| !! | AACTGTTTTCGGATTATTAT+AGG | + | chr3.1:52139614-52139633 | None:intergenic | 25.0% |
| !! | AACTTTTTGCATATTTGGAT+TGG | - | chr3.1:52139139-52139158 | MS.gene41462:CDS | 25.0% |
| !! | ATTTTGCAGTTACATTTAGT+CGG | - | chr3.1:52138301-52138320 | MS.gene41462:intron | 25.0% |
| !! | GATGTAATCATGTTGTTTAT+CGG | + | chr3.1:52136650-52136669 | None:intergenic | 25.0% |
| !! | TAAGTTGAAATAAGCTCTTT+CGG | - | chr3.1:52139693-52139712 | MS.gene41462:CDS | 25.0% |
| !! | TTTTCATAAACTCTCATGTA+GGG | + | chr3.1:52139273-52139292 | None:intergenic | 25.0% |
| !!! | AATCTTTTGAAATCTAGCAA+AGG | - | chr3.1:52140093-52140112 | MS.gene41462:intron | 25.0% |
| !!! | ATATAACGTTGATTTGTCAA+AGG | - | chr3.1:52137585-52137604 | MS.gene41462:CDS | 25.0% |
| !!! | TAAGCAATCTCTTACTTTTA+AGG | + | chr3.1:52138776-52138795 | None:intergenic | 25.0% |
| !!! | TATTGGTAATGATGATTCTA+TGG | - | chr3.1:52138794-52138813 | MS.gene41462:CDS | 25.0% |
| AAACTGTTATCGTTACATCA+AGG | + | chr3.1:52137615-52137634 | None:intergenic | 30.0% | |
| AAATACCATGGACAGTAAAA+TGG | + | chr3.1:52138408-52138427 | None:intergenic | 30.0% | |
| AACTGTGCTACATTTCATTT+AGG | - | chr3.1:52139056-52139075 | MS.gene41462:CDS | 30.0% | |
| AACTGTTATCGTTACATCAA+GGG | + | chr3.1:52137614-52137633 | None:intergenic | 30.0% | |
| AATGACATGCAATAATTCAC+TGG | - | chr3.1:52138704-52138723 | MS.gene41462:intron | 30.0% | |
| AGAAAATAATAGACCAGCAT+GGG | - | chr3.1:52136775-52136794 | MS.gene41462:CDS | 30.0% | |
| ATCAGTTACTTCCTAGATAT+TGG | - | chr3.1:52137071-52137090 | MS.gene41462:CDS | 30.0% | |
| ATTAAGCTGTGTTTACAAAC+AGG | - | chr3.1:52139386-52139405 | MS.gene41462:intron | 30.0% | |
| ATTGTTCTCTTTCCAAAAAC+TGG | + | chr3.1:52139087-52139106 | None:intergenic | 30.0% | |
| ATTTCAGTATTAACGGTTCT+TGG | + | chr3.1:52140882-52140901 | None:intergenic | 30.0% | |
| CAGTTTCTATATTCATGGTA+AGG | + | chr3.1:52136991-52137010 | None:intergenic | 30.0% | |
| CGAAAAACAACTACAGAAAT+TGG | + | chr3.1:52137810-52137829 | None:intergenic | 30.0% | |
| CGTCAAATTGATGCATAATA+AGG | + | chr3.1:52137356-52137375 | None:intergenic | 30.0% | |
| CTATAGTTGAAGAGAAAATG+AGG | - | chr3.1:52139534-52139553 | MS.gene41462:intron | 30.0% | |
| GGAAAAACAATCAAGAAGTT+AGG | - | chr3.1:52136675-52136694 | MS.gene41462:CDS | 30.0% | |
| TAATAATTCCTGAATCCTTC+TGG | - | chr3.1:52140274-52140293 | MS.gene41462:intron | 30.0% | |
| TAGAAAATAATAGACCAGCA+TGG | - | chr3.1:52136774-52136793 | MS.gene41462:CDS | 30.0% | |
| TATTATTATACTCACCAGAG+AGG | + | chr3.1:52140256-52140275 | None:intergenic | 30.0% | |
| TATTGCATAACATAATCACG+TGG | + | chr3.1:52139675-52139694 | None:intergenic | 30.0% | |
| TGAAGCATAAATAGGATCAA+AGG | + | chr3.1:52139724-52139743 | None:intergenic | 30.0% | |
| TGCTTTCATGAAGCATAAAT+AGG | + | chr3.1:52139732-52139751 | None:intergenic | 30.0% | |
| TGGTCTAAATTCCAAAAAAG+TGG | + | chr3.1:52139968-52139987 | None:intergenic | 30.0% | |
| TTAAGCTGTGTTTACAAACA+GGG | - | chr3.1:52139387-52139406 | MS.gene41462:intron | 30.0% | |
| TTATCAAAAACATGGACAGA+AGG | + | chr3.1:52140125-52140144 | None:intergenic | 30.0% | |
| TTCCAAAAAAGTGGTAATAC+TGG | + | chr3.1:52139959-52139978 | None:intergenic | 30.0% | |
| TTCCTGCATTTCAGTATTAA+CGG | + | chr3.1:52140889-52140908 | None:intergenic | 30.0% | |
| TTGTTCTCTTTCCAAAAACT+GGG | + | chr3.1:52139086-52139105 | None:intergenic | 30.0% | |
| ! | AATGTGATGATTGCTCTAAA+TGG | - | chr3.1:52139845-52139864 | MS.gene41462:intron | 30.0% |
| ! | ACGTTACTTTATGAAGTATC+GGG | - | chr3.1:52137373-52137392 | MS.gene41462:intron | 30.0% |
| ! | CAAGAGATTTTCTCCTAAAA+CGG | + | chr3.1:52140403-52140422 | None:intergenic | 30.0% |
| ! | GACGTTACTTTATGAAGTAT+CGG | - | chr3.1:52137372-52137391 | MS.gene41462:intron | 30.0% |
| ! | GGACTTTTCAATTCAGATTT+TGG | - | chr3.1:52137964-52137983 | MS.gene41462:intron | 30.0% |
| ! | GTCCAAACTTTTTGCATATT+TGG | - | chr3.1:52139134-52139153 | MS.gene41462:CDS | 30.0% |
| ! | GTTTTCATAAACTCTCATGT+AGG | + | chr3.1:52139274-52139293 | None:intergenic | 30.0% |
| ! | TGGTCTATTATTTTCTAACG+TGG | + | chr3.1:52136771-52136790 | None:intergenic | 30.0% |
| ! | TTGGAATTATCATGATGATG+TGG | - | chr3.1:52139753-52139772 | MS.gene41462:CDS | 30.0% |
| ! | TTTAACAGTTTGGGAAGTAT+AGG | + | chr3.1:52136962-52136981 | None:intergenic | 30.0% |
| !! | AGAGCATTTAATTTGATGGT+TGG | - | chr3.1:52137440-52137459 | MS.gene41462:intron | 30.0% |
| !! | TTATGCTTCATGAAAGCATT+TGG | - | chr3.1:52139734-52139753 | MS.gene41462:CDS | 30.0% |
| !!! | GTTTTAGGAGAAAATCTCTT+GGG | - | chr3.1:52140402-52140421 | MS.gene41462:intron | 30.0% |
| !!! | TACCAGTATTACCACTTTTT+TGG | - | chr3.1:52139954-52139973 | MS.gene41462:intron | 30.0% |
| !!! | TCTCTGAAGCTGAATTTTTT+TGG | + | chr3.1:52138731-52138750 | None:intergenic | 30.0% |
| AAAAGGAAACACGGAAAACA+AGG | + | chr3.1:52137761-52137780 | None:intergenic | 35.0% | |
| AAAGTTAATGACTGAACAGG+CGG | + | chr3.1:52136746-52136765 | None:intergenic | 35.0% | |
| AAATGTAACCAGAAGGATTC+AGG | + | chr3.1:52140285-52140304 | None:intergenic | 35.0% | |
| AACCGTTAATACTGAAATGC+AGG | - | chr3.1:52140884-52140903 | MS.gene41462:CDS | 35.0% | |
| AAGAAGAGGACTCGAAATAT+TGG | - | chr3.1:52138750-52138769 | MS.gene41462:intron | 35.0% | |
| AAGATGTGAAGGGTAATGAA+TGG | - | chr3.1:52137943-52137962 | MS.gene41462:intron | 35.0% | |
| AGTAACCAAATGTGAAGGTT+CGG | + | chr3.1:52138649-52138668 | None:intergenic | 35.0% | |
| AGTAATTGTGTGCAAAGTAG+AGG | + | chr3.1:52138091-52138110 | None:intergenic | 35.0% | |
| ATACTGGTATGCATCAATCT+TGG | - | chr3.1:52138063-52138082 | MS.gene41462:intron | 35.0% | |
| ATTCATTACCCTTCACATCT+TGG | + | chr3.1:52137944-52137963 | None:intergenic | 35.0% | |
| ATTCTCATTTCCACCAGAAA+AGG | + | chr3.1:52138550-52138569 | None:intergenic | 35.0% | |
| CACCGAAATAGCTTATACAT+GGG | - | chr3.1:52139342-52139361 | MS.gene41462:CDS | 35.0% | |
| CAGTGTTTATAATGAGCAAG+TGG | + | chr3.1:52137215-52137234 | None:intergenic | 35.0% | |
| CATGTTCGAATTATATCACG+TGG | - | chr3.1:52139019-52139038 | MS.gene41462:CDS | 35.0% | |
| CCCAAACACATATTCAAAGA+CGG | + | chr3.1:52136833-52136852 | None:intergenic | 35.0% | |
| CCGTCTTTGAATATGTGTTT+GGG | - | chr3.1:52136830-52136849 | MS.gene41462:CDS | 35.0% | |
| CGTGTCTTCAAGCTATAATT+TGG | - | chr3.1:52137852-52137871 | MS.gene41462:intron | 35.0% | |
| CTCATTTGTTCTTACTTGAG+AGG | - | chr3.1:52138230-52138249 | MS.gene41462:intron | 35.0% | |
| CTCTAAATGGAGAAAGTTAC+CGG | - | chr3.1:52139858-52139877 | MS.gene41462:intron | 35.0% | |
| CTCTCAAGTAAGAACAAATG+AGG | + | chr3.1:52138232-52138251 | None:intergenic | 35.0% | |
| GAACAAAGAAAGAAGAGATG+AGG | - | chr3.1:52140995-52141014 | MS.gene41462:CDS | 35.0% | |
| GCAAAAGTTAATGACTGAAC+AGG | + | chr3.1:52136749-52136768 | None:intergenic | 35.0% | |
| GGAAAAAATCAAACTGTCGT+CGG | + | chr3.1:52139442-52139461 | None:intergenic | 35.0% | |
| GGCTGTTCGAAGAAATTTAT+AGG | + | chr3.1:52139421-52139440 | None:intergenic | 35.0% | |
| GTTAATACTGAAATGCAGGA+AGG | - | chr3.1:52140888-52140907 | MS.gene41462:CDS | 35.0% | |
| TACTGGTATGCATCAATCTT+GGG | - | chr3.1:52138064-52138083 | MS.gene41462:intron | 35.0% | |
| TAGCTATGTGATATGACAAC+TGG | - | chr3.1:52137312-52137331 | MS.gene41462:CDS | 35.0% | |
| TATGGAGTTGAGACTTACAT+GGG | - | chr3.1:52138812-52138831 | MS.gene41462:CDS | 35.0% | |
| TATGTCAACTATTTCGTCCA+GGG | - | chr3.1:52139804-52139823 | MS.gene41462:intron | 35.0% | |
| TCACCGAAATAGCTTATACA+TGG | - | chr3.1:52139341-52139360 | MS.gene41462:CDS | 35.0% | |
| TCACTATCTCATATGAAGAC+TGG | + | chr3.1:52139988-52140007 | None:intergenic | 35.0% | |
| TCTGCATAAGCTTGTATATG+TGG | - | chr3.1:52139563-52139582 | MS.gene41462:intron | 35.0% | |
| TCTTTCTTTGTTCCCAACAT+TGG | + | chr3.1:52140988-52141007 | None:intergenic | 35.0% | |
| TGCCCATGTATAAGCTATTT+CGG | + | chr3.1:52139347-52139366 | None:intergenic | 35.0% | |
| TGGAAATGAGAATCTTCCAT+CGG | - | chr3.1:52138557-52138576 | MS.gene41462:intron | 35.0% | |
| TGGACTTCTTACAAAATTGC+AGG | - | chr3.1:52137872-52137891 | MS.gene41462:intron | 35.0% | |
| TGTTCTCTTTCCAAAAACTG+GGG | + | chr3.1:52139085-52139104 | None:intergenic | 35.0% | |
| TTCTATATTCATGGTAAGGC+CGG | + | chr3.1:52136987-52137006 | None:intergenic | 35.0% | |
| ! | ACTAAATAGAGGTCAAGTTG+AGG | - | chr3.1:52140728-52140747 | MS.gene41462:CDS | 35.0% |
| ! | CAAAACCATTTTACTGTCCA+TGG | - | chr3.1:52138400-52138419 | MS.gene41462:intron | 35.0% |
| ! | CAGCTTACTCAAACTGTTTT+CGG | + | chr3.1:52139625-52139644 | None:intergenic | 35.0% |
| ! | TACATCCTGCTGTTGTTATT+AGG | + | chr3.1:52137990-52138009 | None:intergenic | 35.0% |
| ! | TAGATATTGGCCTAGGATTA+CGG | - | chr3.1:52137084-52137103 | MS.gene41462:CDS | 35.0% |
| ! | TGAATCCTTCTGGTTACATT+TGG | - | chr3.1:52140284-52140303 | MS.gene41462:intron | 35.0% |
| !! | GTTTGAGTAAGCTGTTTTCA+CGG | - | chr3.1:52139631-52139650 | MS.gene41462:CDS | 35.0% |
| !! | TCACAGATTTTAAGAAGCGA+CGG | - | chr3.1:52140310-52140329 | MS.gene41462:intron | 35.0% |
| !!! | ACGACAGTTTGATTTTTTCC+TGG | - | chr3.1:52139442-52139461 | MS.gene41462:intron | 35.0% |
| !!! | CGTTTTAGGAGAAAATCTCT+TGG | - | chr3.1:52140401-52140420 | MS.gene41462:intron | 35.0% |
| AAATCCATGGCCTGTATACA+AGG | + | chr3.1:52138032-52138051 | None:intergenic | 40.0% | |
| AACGAAGGAGGACTAAATAG+AGG | - | chr3.1:52140717-52140736 | MS.gene41462:CDS | 40.0% | |
| AAGAGAAGTTGCGAATCCTT+TGG | - | chr3.1:52140692-52140711 | MS.gene41462:CDS | 40.0% | |
| AATCCATGGCCTGTATACAA+GGG | + | chr3.1:52138031-52138050 | None:intergenic | 40.0% | |
| ACATTTAGTCGGATAGATCC+TGG | - | chr3.1:52138312-52138331 | MS.gene41462:intron | 40.0% | |
| ACTAAGCTCAGAGTTAACCT+TGG | - | chr3.1:52137506-52137525 | MS.gene41462:intron | 40.0% | |
| AGATGCATTGCATCCAATGT+TGG | - | chr3.1:52140972-52140991 | MS.gene41462:CDS | 40.0% | |
| ATCAAATTCCGTAGACACAC+AGG | - | chr3.1:52138365-52138384 | MS.gene41462:intron | 40.0% | |
| ATCCTCACCATTAGATTGAG+TGG | + | chr3.1:52140931-52140950 | None:intergenic | 40.0% | |
| ATGCTGATGCTGACACAATT+CGG | + | chr3.1:52140209-52140228 | None:intergenic | 40.0% | |
| ATTCAGCTTCAGAGAAGAAG+AGG | - | chr3.1:52138736-52138755 | MS.gene41462:intron | 40.0% | |
| ATTTAGTCGGATAGATCCTG+GGG | - | chr3.1:52138314-52138333 | MS.gene41462:intron | 40.0% | |
| CATAACATAATCACGTGGCT+CGG | + | chr3.1:52139670-52139689 | None:intergenic | 40.0% | |
| CATTTAGTCGGATAGATCCT+GGG | - | chr3.1:52138313-52138332 | MS.gene41462:intron | 40.0% | |
| CCTCATATTACACACTCTGA+AGG | - | chr3.1:52137903-52137922 | MS.gene41462:intron | 40.0% | |
| CCTTCAGAGTGTGTAATATG+AGG | + | chr3.1:52137906-52137925 | None:intergenic | 40.0% | |
| CTAAAAACAAACCTCAGCAC+AGG | + | chr3.1:52137721-52137740 | None:intergenic | 40.0% | |
| CTATGGAGTTGAGACTTACA+TGG | - | chr3.1:52138811-52138830 | MS.gene41462:CDS | 40.0% | |
| CTTATTCTGTTTGTCCTCTC+TGG | - | chr3.1:52140239-52140258 | MS.gene41462:intron | 40.0% | |
| CTTCCCAAACTGTTAAAGAC+CGG | - | chr3.1:52136965-52136984 | MS.gene41462:CDS | 40.0% | |
| GAACACCAAATGTAACCAGA+AGG | + | chr3.1:52140292-52140311 | None:intergenic | 40.0% | |
| GAACCTTCACATTTGGTTAC+TGG | - | chr3.1:52138648-52138667 | MS.gene41462:intron | 40.0% | |
| GACATGTTCGGAAAATGTCT+GGG | - | chr3.1:52139906-52139925 | MS.gene41462:intron | 40.0% | |
| GATACAACTAACATGGATCC+AGG | + | chr3.1:52139463-52139482 | None:intergenic | 40.0% | |
| GATGCATTGCATCCAATGTT+GGG | - | chr3.1:52140973-52140992 | MS.gene41462:CDS | 40.0% | |
| GCCGTCTTTGAATATGTGTT+TGG | - | chr3.1:52136829-52136848 | MS.gene41462:CDS | 40.0% | |
| GGAAATGAGAATCTTCCATC+GGG | - | chr3.1:52138558-52138577 | MS.gene41462:intron | 40.0% | |
| GGAAGGTCAACATTCTTCTT+TGG | - | chr3.1:52140905-52140924 | MS.gene41462:CDS | 40.0% | |
| GGATGCAATGCATCTTTCAT+CGG | + | chr3.1:52140967-52140986 | None:intergenic | 40.0% | |
| GTAACCAAATGTGAAGGTTC+GGG | + | chr3.1:52138648-52138667 | None:intergenic | 40.0% | |
| GTAATCCTAGGCCAATATCT+AGG | + | chr3.1:52137085-52137104 | None:intergenic | 40.0% | |
| GTATGTCAACTATTTCGTCC+AGG | - | chr3.1:52139803-52139822 | MS.gene41462:intron | 40.0% | |
| GTTCTCTTTCCAAAAACTGG+GGG | + | chr3.1:52139084-52139103 | None:intergenic | 40.0% | |
| TATCTCCTCCCTTTCATCAA+GGG | - | chr3.1:52136924-52136943 | MS.gene41462:CDS | 40.0% | |
| TCTACGTCTGCACTTTCTAA+TGG | - | chr3.1:52138504-52138523 | MS.gene41462:intron | 40.0% | |
| TCTTTGGCCACTCAATCTAA+TGG | - | chr3.1:52140921-52140940 | MS.gene41462:CDS | 40.0% | |
| TTCTCCTAAAACGGCTAAAC+TGG | + | chr3.1:52140394-52140413 | None:intergenic | 40.0% | |
| TTTCTCAACCACGTATTGCT+CGG | - | chr3.1:52137023-52137042 | MS.gene41462:CDS | 40.0% | |
| TTTGGCCTAATAACAACAGC+AGG | - | chr3.1:52137982-52138001 | MS.gene41462:intron | 40.0% | |
| ! | AAAATGTCTGGGATACAAGC+AGG | - | chr3.1:52139917-52139936 | MS.gene41462:intron | 40.0% |
| ! | AATCCTTTGGAAAACGAAGG+AGG | - | chr3.1:52140705-52140724 | MS.gene41462:CDS | 40.0% |
| ! | AGTAGTGCCATTGTTTGAGA+AGG | - | chr3.1:52137644-52137663 | MS.gene41462:intron | 40.0% |
| ! | ATGCTTTTAATCTCCCATGC+TGG | + | chr3.1:52136791-52136810 | None:intergenic | 40.0% |
| ! | ATTTAGGAACCCCCAGTTTT+TGG | - | chr3.1:52139072-52139091 | MS.gene41462:CDS | 40.0% |
| ! | ATTTGGTGAACGGAGAAGAT+CGG | + | chr3.1:52138595-52138614 | None:intergenic | 40.0% |
| ! | ATTTTCCGAACATGTCCACT+TGG | + | chr3.1:52139902-52139921 | None:intergenic | 40.0% |
| ! | GGTTTGCTTAAAGCCGAAAA+TGG | - | chr3.1:52138678-52138697 | MS.gene41462:intron | 40.0% |
| ! | TACTTCCTAGATATTGGCCT+AGG | - | chr3.1:52137077-52137096 | MS.gene41462:CDS | 40.0% |
| ! | TTTTCCGAACATGTCCACTT+GGG | + | chr3.1:52139901-52139920 | None:intergenic | 40.0% |
| !! | AATAGAGGTCAAGTTGAGGT+TGG | - | chr3.1:52140732-52140751 | MS.gene41462:CDS | 40.0% |
| !! | GCATGTCATTTCGCCATTTT+CGG | + | chr3.1:52138694-52138713 | None:intergenic | 40.0% |
| AACAACTCTTTCCCACCATC+TGG | - | chr3.1:52136866-52136885 | MS.gene41462:CDS | 45.0% | |
| AACGGGGAACTTCGCTTAAA+TGG | - | chr3.1:52138618-52138637 | MS.gene41462:intron | 45.0% | |
| AACTATTTCGTCCAGGGTGA+AGG | - | chr3.1:52139810-52139829 | MS.gene41462:intron | 45.0% | |
| AAGAAGTTAGGCCGTCATTC+AGG | - | chr3.1:52136687-52136706 | MS.gene41462:CDS | 45.0% | |
| AAGATCTATCTTTCCAGCGC+TGG | + | chr3.1:52140763-52140782 | None:intergenic | 45.0% | |
| AAGGCCGGTCTTTAACAGTT+TGG | + | chr3.1:52136972-52136991 | None:intergenic | 45.0% | |
| AATTCCGTAGACACACAGGT+TGG | - | chr3.1:52138369-52138388 | MS.gene41462:intron | 45.0% | |
| ACATCCCGAACCTTCACATT+TGG | - | chr3.1:52138641-52138660 | MS.gene41462:intron | 45.0% | |
| ACGTCTGCACTTTCTAATGG+CGG | - | chr3.1:52138507-52138526 | MS.gene41462:intron | 45.0% | |
| ACTACAGACGGAAGACTTGA+GGG | - | chr3.1:52136896-52136915 | MS.gene41462:CDS | 45.0% | |
| AGAAGTTAGGCCGTCATTCA+GGG | - | chr3.1:52136688-52136707 | MS.gene41462:CDS | 45.0% | |
| AGATCTTGGCCCTTGATGAA+AGG | + | chr3.1:52136936-52136955 | None:intergenic | 45.0% | |
| AGCAGGATGTACGTATTGGA+GGG | - | chr3.1:52137999-52138018 | MS.gene41462:intron | 45.0% | |
| AGGCCGGTCTTTAACAGTTT+GGG | + | chr3.1:52136971-52136990 | None:intergenic | 45.0% | |
| ATCACCAGCACGTAAATCCA+TGG | + | chr3.1:52138045-52138064 | None:intergenic | 45.0% | |
| ATCCATGGCCTGTATACAAG+GGG | + | chr3.1:52138030-52138049 | None:intergenic | 45.0% | |
| CAACAGCAGGATGTACGTAT+TGG | - | chr3.1:52137995-52138014 | MS.gene41462:intron | 45.0% | |
| CACACAATACAAGAACAGCC+GGG | + | chr3.1:52140477-52140496 | None:intergenic | 45.0% | |
| CACACGTTGCAAGTACATGT+TGG | + | chr3.1:52140534-52140553 | None:intergenic | 45.0% | |
| CAGATCTTCATGTTCTGCAC+CGG | - | chr3.1:52140044-52140063 | MS.gene41462:intron | 45.0% | |
| CTCAAACAATGGCACTACTG+TGG | + | chr3.1:52137643-52137662 | None:intergenic | 45.0% | |
| CTCAGCACCTTCTCAAACAA+TGG | + | chr3.1:52137654-52137673 | None:intergenic | 45.0% | |
| CTCCGTTCACCAAATGGTAA+CGG | - | chr3.1:52138600-52138619 | MS.gene41462:intron | 45.0% | |
| GATCTTCTCCGTTCACCAAA+TGG | - | chr3.1:52138594-52138613 | MS.gene41462:CDS | 45.0% | |
| GATCTTGGCCCTTGATGAAA+GGG | + | chr3.1:52136935-52136954 | None:intergenic | 45.0% | |
| GCACACAATACAAGAACAGC+CGG | + | chr3.1:52140478-52140497 | None:intergenic | 45.0% | |
| GCATGCATGAATCAAATGCG+AGG | - | chr3.1:52136807-52136826 | MS.gene41462:CDS | 45.0% | |
| GGACATGTTCGGAAAATGTC+TGG | - | chr3.1:52139905-52139924 | MS.gene41462:intron | 45.0% | |
| GGGCAAGATCAAGATACTCT+AGG | - | chr3.1:52137167-52137186 | MS.gene41462:CDS | 45.0% | |
| GGTCCAGTAACCAAATGTGA+AGG | + | chr3.1:52138654-52138673 | None:intergenic | 45.0% | |
| GTAACCAACCTGTGTGTCTA+CGG | + | chr3.1:52138376-52138395 | None:intergenic | 45.0% | |
| GTATCTCCTCCCTTTCATCA+AGG | - | chr3.1:52136923-52136942 | MS.gene41462:CDS | 45.0% | |
| GTTGACGAGTCAGATACCAA+TGG | - | chr3.1:52140660-52140679 | MS.gene41462:CDS | 45.0% | |
| TCCGTTCACCAAATGGTAAC+GGG | - | chr3.1:52138601-52138620 | MS.gene41462:intron | 45.0% | |
| TCCTCGATTGTGACAATGCT+TGG | + | chr3.1:52138879-52138898 | None:intergenic | 45.0% | |
| TGCACTTTCTAATGGCGGTT+CGG | - | chr3.1:52138512-52138531 | MS.gene41462:intron | 45.0% | |
| TTCTCTTGATGCTCCACCAT+TGG | + | chr3.1:52140679-52140698 | None:intergenic | 45.0% | |
| TTTAGTCGGATAGATCCTGG+GGG | - | chr3.1:52138315-52138334 | MS.gene41462:intron | 45.0% | |
| ! | AAACCTCAGCACAGGCTTTT+GGG | + | chr3.1:52137713-52137732 | None:intergenic | 45.0% |
| ! | ACAATGCTTGGCTTGACACT+GGG | + | chr3.1:52138867-52138886 | None:intergenic | 45.0% |
| ! | ACTCTGAAGGTCTTCCTTTG+CGG | - | chr3.1:52137916-52137935 | MS.gene41462:intron | 45.0% |
| ! | AGTCCTCCTTCGTTTTCCAA+AGG | + | chr3.1:52140711-52140730 | None:intergenic | 45.0% |
| ! | GATTTACGTGCTGGTGATAC+TGG | - | chr3.1:52138047-52138066 | MS.gene41462:intron | 45.0% |
| ! | GCGAATCCTTTGGAAAACGA+AGG | - | chr3.1:52140702-52140721 | MS.gene41462:CDS | 45.0% |
| ! | GGAAGTATAGGACGAGATCT+TGG | + | chr3.1:52136950-52136969 | None:intergenic | 45.0% |
| !! | CCTGGGGGAAAACTTGTTAT+GGG | - | chr3.1:52138330-52138349 | MS.gene41462:intron | 45.0% |
| !! | TCCTGGGGGAAAACTTGTTA+TGG | - | chr3.1:52138329-52138348 | MS.gene41462:intron | 45.0% |
| !! | TTCGGCTTTAAGCAAACCAG+CGG | + | chr3.1:52138676-52138695 | None:intergenic | 45.0% |
| !! | TAATAAACAAAATAAAAATA+TGG | + | chr3.1:52138956-52138975 | None:intergenic | 5.0% |
| AAACATCCTAGACACCGTCC+CGG | - | chr3.1:52140456-52140475 | MS.gene41462:intron | 50.0% | |
| AACTCTTTCCCACCATCTGG+TGG | - | chr3.1:52136869-52136888 | MS.gene41462:CDS | 50.0% | |
| ACTTGCGAGTCATCGCGATT+GGG | + | chr3.1:52140795-52140814 | None:intergenic | 50.0% | |
| ATCCAAGAACACGAGCCTTC+TGG | - | chr3.1:52140354-52140373 | MS.gene41462:intron | 50.0% | |
| ATCTTCAGCGCCTCTTCATC+TGG | - | chr3.1:52139105-52139124 | MS.gene41462:CDS | 50.0% | |
| ATGCTCTTCTTCCTCCCAAG+TGG | - | chr3.1:52139884-52139903 | MS.gene41462:intron | 50.0% | |
| ATGTGTTTGGGAAACCCGTC+AGG | - | chr3.1:52136842-52136861 | MS.gene41462:CDS | 50.0% | |
| ATTCAGCCACCAAGCGGAAA+AGG | - | chr3.1:52140498-52140517 | MS.gene41462:intron | 50.0% | |
| CAATACAAGAACAGCCGGGA+CGG | + | chr3.1:52140473-52140492 | None:intergenic | 50.0% | |
| CAGCAGGATGTACGTATTGG+AGG | - | chr3.1:52137998-52138017 | MS.gene41462:intron | 50.0% | |
| CGAAGTTCCCCGTTACCATT+TGG | + | chr3.1:52138612-52138631 | None:intergenic | 50.0% | |
| GACGAGTCAGATACCAATGG+TGG | - | chr3.1:52140663-52140682 | MS.gene41462:CDS | 50.0% | |
| GACTACAGACGGAAGACTTG+AGG | - | chr3.1:52136895-52136914 | MS.gene41462:CDS | 50.0% | |
| GCAGGGATCAAGTTACTCCA+AGG | + | chr3.1:52137526-52137545 | None:intergenic | 50.0% | |
| GGAAAGAGTTGTTCCCTGAC+GGG | + | chr3.1:52136859-52136878 | None:intergenic | 50.0% | |
| GGACTCTTACCCAGATGAAG+AGG | + | chr3.1:52139118-52139137 | None:intergenic | 50.0% | |
| GGCCACTCAATCTAATGGTG+AGG | - | chr3.1:52140926-52140945 | MS.gene41462:CDS | 50.0% | |
| GGGAAAGAGTTGTTCCCTGA+CGG | + | chr3.1:52136860-52136879 | None:intergenic | 50.0% | |
| GTATCCCCTTCCCTGAATGA+CGG | + | chr3.1:52136701-52136720 | None:intergenic | 50.0% | |
| TAGTCTCTCCACCAGATGGT+GGG | + | chr3.1:52136880-52136899 | None:intergenic | 50.0% | |
| TCATTCAGGGAAGGGGATAC+TGG | - | chr3.1:52136701-52136720 | MS.gene41462:CDS | 50.0% | |
| TCCTCCCAAGTGGACATGTT+CGG | - | chr3.1:52139894-52139913 | MS.gene41462:intron | 50.0% | |
| TCGGCACAATTACTTCCCGA+TGG | + | chr3.1:52138576-52138595 | None:intergenic | 50.0% | |
| TCTGGTGGAGAGACTACAGA+CGG | - | chr3.1:52136884-52136903 | MS.gene41462:CDS | 50.0% | |
| TCTGTAGTCTCTCCACCAGA+TGG | + | chr3.1:52136884-52136903 | None:intergenic | 50.0% | |
| TCTTCAGCGCCTCTTCATCT+GGG | - | chr3.1:52139106-52139125 | MS.gene41462:CDS | 50.0% | |
| TGTGTTTGGGAAACCCGTCA+GGG | - | chr3.1:52136843-52136862 | MS.gene41462:CDS | 50.0% | |
| TTAGGCCGTCATTCAGGGAA+GGG | - | chr3.1:52136693-52136712 | MS.gene41462:CDS | 50.0% | |
| TTCACATCTTGGACCCGCAA+AGG | + | chr3.1:52137933-52137952 | None:intergenic | 50.0% | |
| TTCAGCCACCAAGCGGAAAA+GGG | - | chr3.1:52140499-52140518 | MS.gene41462:intron | 50.0% | |
| TTGCGGGTCCAAGATGTGAA+GGG | - | chr3.1:52137933-52137952 | MS.gene41462:intron | 50.0% | |
| TTTGCGGGTCCAAGATGTGA+AGG | - | chr3.1:52137932-52137951 | MS.gene41462:intron | 50.0% | |
| ! | AAGGGAGACACCTTTTCTGG+TGG | - | chr3.1:52138537-52138556 | MS.gene41462:intron | 50.0% |
| ! | ACGGTGTCTAGGATGTTTCG+TGG | + | chr3.1:52140454-52140473 | None:intergenic | 50.0% |
| ! | CAAACCTCAGCACAGGCTTT+TGG | + | chr3.1:52137714-52137733 | None:intergenic | 50.0% |
| ! | CCCATAACAAGTTTTCCCCC+AGG | + | chr3.1:52138333-52138352 | None:intergenic | 50.0% |
| ! | CCCCGTTACCATTTGGTGAA+CGG | + | chr3.1:52138605-52138624 | None:intergenic | 50.0% |
| ! | CCGTTCACCAAATGGTAACG+GGG | - | chr3.1:52138602-52138621 | MS.gene41462:intron | 50.0% |
| ! | CTCTGAAGGTCTTCCTTTGC+GGG | - | chr3.1:52137917-52137936 | MS.gene41462:intron | 50.0% |
| ! | GACAATGCTTGGCTTGACAC+TGG | + | chr3.1:52138868-52138887 | None:intergenic | 50.0% |
| ! | GCAAAGGGAGACACCTTTTC+TGG | - | chr3.1:52138534-52138553 | MS.gene41462:intron | 50.0% |
| ! | GCCAAGCATTGTCACAATCG+AGG | - | chr3.1:52138875-52138894 | MS.gene41462:CDS | 50.0% |
| ! | GTGTCTAGGATGTTTCGTGG+TGG | + | chr3.1:52140451-52140470 | None:intergenic | 50.0% |
| ! | TCTAATGGCGGTTCGGCAAA+GGG | - | chr3.1:52138519-52138538 | MS.gene41462:intron | 50.0% |
| ! | TTCTAATGGCGGTTCGGCAA+AGG | - | chr3.1:52138518-52138537 | MS.gene41462:intron | 50.0% |
| ! | TTGTGTCTCCCTTTTCCGCT+TGG | + | chr3.1:52140510-52140529 | None:intergenic | 50.0% |
| !! | CGTTTTGAACCGACGCTTCA+CGG | + | chr3.1:52140562-52140581 | None:intergenic | 50.0% |
| !! | CTCGCCAGTTTAGCCGTTTT+AGG | - | chr3.1:52140387-52140406 | MS.gene41462:intron | 50.0% |
| !! | GGAGGAAGAAGAGCATCAAC+CGG | + | chr3.1:52139880-52139899 | None:intergenic | 50.0% |
| !! | TCGGCTTTAAGCAAACCAGC+GGG | + | chr3.1:52138675-52138694 | None:intergenic | 50.0% |
| ACCAATCCGACCTGCATCAC+TGG | + | chr3.1:52137679-52137698 | None:intergenic | 55.0% | |
| AGCCAGAAGGCTCGTGTTCT+TGG | + | chr3.1:52140359-52140378 | None:intergenic | 55.0% | |
| AGCTCCTGGTCCGTAATCCT+AGG | + | chr3.1:52137097-52137116 | None:intergenic | 55.0% | |
| CAATCGCGATGACTCGCAAG+TGG | - | chr3.1:52140794-52140813 | MS.gene41462:CDS | 55.0% | |
| CACTTGCGAGTCATCGCGAT+TGG | + | chr3.1:52140796-52140815 | None:intergenic | 55.0% | |
| CAGGCCATGGATTTACGTGC+TGG | - | chr3.1:52138038-52138057 | MS.gene41462:intron | 55.0% | |
| CATTTGGTTACTGGACCCGC+TGG | - | chr3.1:52138657-52138676 | MS.gene41462:intron | 55.0% | |
| CGAGCTGAGCTCAAGGGAAT+TGG | - | chr3.1:52140068-52140087 | MS.gene41462:intron | 55.0% | |
| CTTGGCCCTTGATGAAAGGG+AGG | + | chr3.1:52136932-52136951 | None:intergenic | 55.0% | |
| GACCCCTTGTATACAGGCCA+TGG | - | chr3.1:52138025-52138044 | MS.gene41462:intron | 55.0% | |
| GGGTGTGACCCCTTGTATAC+AGG | - | chr3.1:52138019-52138038 | MS.gene41462:intron | 55.0% | |
| GTAGTCTCTCCACCAGATGG+TGG | + | chr3.1:52136881-52136900 | None:intergenic | 55.0% | |
| GTCCAGGGTGAAGGAACAGT+GGG | - | chr3.1:52139819-52139838 | MS.gene41462:intron | 55.0% | |
| GTGTGCATTCAGCCACCAAG+CGG | - | chr3.1:52140492-52140511 | MS.gene41462:intron | 55.0% | |
| GTTAGGCCGTCATTCAGGGA+AGG | - | chr3.1:52136692-52136711 | MS.gene41462:CDS | 55.0% | |
| TAGGATTACGGACCAGGAGC+TGG | - | chr3.1:52137096-52137115 | MS.gene41462:CDS | 55.0% | |
| TAGGCCGTCATTCAGGGAAG+GGG | - | chr3.1:52136694-52136713 | MS.gene41462:CDS | 55.0% | |
| TCCGAACATGTCCACTTGGG+AGG | + | chr3.1:52139898-52139917 | None:intergenic | 55.0% | |
| TCTCCCAAAAGCCTGTGCTG+AGG | - | chr3.1:52137707-52137726 | MS.gene41462:intron | 55.0% | |
| TGAGTGCCAGTGATGCAGGT+CGG | - | chr3.1:52137670-52137689 | MS.gene41462:intron | 55.0% | |
| TGTGTACGACCGTGAAGCGT+CGG | - | chr3.1:52140550-52140569 | MS.gene41462:intron | 55.0% | |
| TTCTTACCCCTCCCATCACC+AGG | + | chr3.1:52137052-52137071 | None:intergenic | 55.0% | |
| TTGGCCTAGGATTACGGACC+AGG | - | chr3.1:52137090-52137109 | MS.gene41462:CDS | 55.0% | |
| ! | ATGCTTGGCTTGACACTGGG+CGG | + | chr3.1:52138864-52138883 | None:intergenic | 55.0% |
| ! | CGGTTCTTGGACCGCCATTT+TGG | + | chr3.1:52140869-52140888 | None:intergenic | 55.0% |
| ! | TGTCTCCCTTTTCCGCTTGG+TGG | + | chr3.1:52140507-52140526 | None:intergenic | 55.0% |
| ACCGGACGAGCTGAGCTCAA+GGG | - | chr3.1:52140062-52140081 | MS.gene41462:intron | 60.0% | |
| AGCCCACTGTTCCTTCACCC+TGG | + | chr3.1:52139824-52139843 | None:intergenic | 60.0% | |
| ATTGCTCGGCCTCCTGGTGA+TGG | - | chr3.1:52137037-52137056 | MS.gene41462:CDS | 60.0% | |
| CAGACAAACGCTCCAGCTCC+TGG | + | chr3.1:52137111-52137130 | None:intergenic | 60.0% | |
| CGTCCAGGGTGAAGGAACAG+TGG | - | chr3.1:52139818-52139837 | MS.gene41462:intron | 60.0% | |
| CTCCAGCTGCGGAATCAGCA+GGG | + | chr3.1:52140428-52140447 | None:intergenic | 60.0% | |
| GCCAGTGATGCAGGTCGGAT+TGG | - | chr3.1:52137675-52137694 | MS.gene41462:intron | 60.0% | |
| GTGCTGAGTGCCAGTGATGC+AGG | - | chr3.1:52137666-52137685 | MS.gene41462:intron | 60.0% | |
| TCCCTTGAGCTCAGCTCGTC+CGG | + | chr3.1:52140066-52140085 | None:intergenic | 60.0% | |
| TTACCCCTCCCATCACCAGG+AGG | + | chr3.1:52137049-52137068 | None:intergenic | 60.0% | |
| TTGCTCGGCCTCCTGGTGAT+GGG | - | chr3.1:52137038-52137057 | MS.gene41462:CDS | 60.0% | |
| TTTCGTGGTGGCTCCAGCTG+CGG | + | chr3.1:52140439-52140458 | None:intergenic | 60.0% | |
| ! | CAGGAGCTGGAGCGTTTGTC+TGG | - | chr3.1:52137109-52137128 | MS.gene41462:CDS | 60.0% |
| !! | GCGAGAGCGTCTAAGCCAGA+AGG | + | chr3.1:52140372-52140391 | None:intergenic | 60.0% |
| CACCGGACGAGCTGAGCTCA+AGG | - | chr3.1:52140061-52140080 | MS.gene41462:intron | 65.0% | |
| CCACGTATTGCTCGGCCTCC+TGG | - | chr3.1:52137031-52137050 | MS.gene41462:CDS | 65.0% | |
| CCAGGAGGCCGAGCAATACG+TGG | + | chr3.1:52137034-52137053 | None:intergenic | 65.0% | |
| GAACAGCCGGGACGGTGTCT+AGG | + | chr3.1:52140465-52140484 | None:intergenic | 65.0% | |
| GCTCCAGCTGCGGAATCAGC+AGG | + | chr3.1:52140429-52140448 | None:intergenic | 65.0% | |
| ! | CTTGGCTTGACACTGGGCGG+TGG | + | chr3.1:52138861-52138880 | None:intergenic | 65.0% |
| !! | TCGGCCTCCTGGTGATGGGA+GGG | - | chr3.1:52137042-52137061 | MS.gene41462:CDS | 65.0% |
| GAGGTTGGCGAGTCCAGCGC+TGG | - | chr3.1:52140747-52140766 | MS.gene41462:CDS | 70.0% | |
| !! | CGGCCTCCTGGTGATGGGAG+GGG | - | chr3.1:52137043-52137062 | MS.gene41462:CDS | 70.0% |
| !! | CTCGGCCTCCTGGTGATGGG+AGG | - | chr3.1:52137041-52137060 | MS.gene41462:CDS | 70.0% |
| !! | GGCCCTGCTGATTCCGCAGC+TGG | - | chr3.1:52140423-52140442 | MS.gene41462:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 52136635 | 52141058 | 52136635 | ID=MS.gene41462 |
| chr3.1 | mRNA | 52136635 | 52141058 | 52136635 | ID=MS.gene41462.t1;Parent=MS.gene41462 |
| chr3.1 | exon | 52140559 | 52141058 | 52140559 | ID=MS.gene41462.t1.exon1;Parent=MS.gene41462.t1 |
| chr3.1 | CDS | 52140559 | 52141058 | 52140559 | ID=cds.MS.gene41462.t1;Parent=MS.gene41462.t1 |
| chr3.1 | exon | 52139965 | 52140061 | 52139965 | ID=MS.gene41462.t1.exon2;Parent=MS.gene41462.t1 |
| chr3.1 | CDS | 52139965 | 52140061 | 52139965 | ID=cds.MS.gene41462.t1;Parent=MS.gene41462.t1 |
| chr3.1 | exon | 52139625 | 52139799 | 52139625 | ID=MS.gene41462.t1.exon3;Parent=MS.gene41462.t1 |
| chr3.1 | CDS | 52139625 | 52139799 | 52139625 | ID=cds.MS.gene41462.t1;Parent=MS.gene41462.t1 |
| chr3.1 | exon | 52139307 | 52139383 | 52139307 | ID=MS.gene41462.t1.exon4;Parent=MS.gene41462.t1 |
| chr3.1 | CDS | 52139307 | 52139383 | 52139307 | ID=cds.MS.gene41462.t1;Parent=MS.gene41462.t1 |
| chr3.1 | exon | 52138773 | 52139195 | 52138773 | ID=MS.gene41462.t1.exon5;Parent=MS.gene41462.t1 |
| chr3.1 | CDS | 52138773 | 52139195 | 52138773 | ID=cds.MS.gene41462.t1;Parent=MS.gene41462.t1 |
| chr3.1 | exon | 52138566 | 52138615 | 52138566 | ID=MS.gene41462.t1.exon6;Parent=MS.gene41462.t1 |
| chr3.1 | CDS | 52138566 | 52138615 | 52138566 | ID=cds.MS.gene41462.t1;Parent=MS.gene41462.t1 |
| chr3.1 | exon | 52137755 | 52137868 | 52137755 | ID=MS.gene41462.t1.exon7;Parent=MS.gene41462.t1 |
| chr3.1 | CDS | 52137755 | 52137868 | 52137755 | ID=cds.MS.gene41462.t1;Parent=MS.gene41462.t1 |
| chr3.1 | exon | 52137579 | 52137646 | 52137579 | ID=MS.gene41462.t1.exon8;Parent=MS.gene41462.t1 |
| chr3.1 | CDS | 52137579 | 52137646 | 52137579 | ID=cds.MS.gene41462.t1;Parent=MS.gene41462.t1 |
| chr3.1 | exon | 52136635 | 52137377 | 52136635 | ID=MS.gene41462.t1.exon9;Parent=MS.gene41462.t1 |
| chr3.1 | CDS | 52136635 | 52137377 | 52136635 | ID=cds.MS.gene41462.t1;Parent=MS.gene41462.t1 |
| Gene Sequence |
| Protein sequence |
