AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene41647

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41647.t1 MTR_3g498695 94.534 494 15 5 1 491 1 485 0.0 941
MS.gene41647.t1 MTR_3g498695 94.332 494 15 6 1 491 1 484 0.0 934
MS.gene41647.t1 MTR_7g083900 67.138 283 67 7 223 490 203 474 3.25e-104 320
MS.gene41647.t1 MTR_7g083900 66.901 284 67 8 223 490 203 475 1.90e-102 315
MS.gene41647.t1 MTR_3g030700 49.576 236 98 4 265 484 141 371 8.51e-68 222
MS.gene41647.t1 MTR_2g081040 54.011 187 86 0 302 488 175 361 2.81e-65 215
MS.gene41647.t1 MTR_3g104100 52.941 187 88 0 302 488 193 379 3.95e-64 213
MS.gene41647.t1 MTR_3g111290 43.333 210 91 5 280 489 153 334 6.19e-37 139
MS.gene41647.t1 MTR_5g030770 46.000 200 86 4 293 489 142 322 4.13e-36 136
MS.gene41647.t1 MTR_5g030770 46.000 200 80 5 293 489 142 316 9.89e-35 132
MS.gene41647.t1 MTR_1g112680 35.749 207 106 5 299 483 312 513 7.24e-32 128
MS.gene41647.t1 MTR_8g064700 30.918 207 135 4 276 482 217 415 6.05e-23 101
MS.gene41647.t1 MTR_1g072320 34.518 197 115 6 295 481 456 648 3.09e-18 88.2
MS.gene41647.t1 MTR_2g038040 31.638 177 114 4 300 471 48 222 7.34e-18 83.6
MS.gene41647.t1 MTR_2g084280 30.508 177 105 4 271 442 95 258 3.36e-16 79.7
MS.gene41647.t1 MTR_0250s0040 28.409 176 110 3 305 477 89 251 9.42e-16 77.8
MS.gene41647.t1 MTR_4g094762 28.500 200 129 6 291 483 278 470 1.82e-14 75.9
MS.gene41647.t1 MTR_8g098275 33.333 159 84 4 305 444 245 400 3.27e-14 75.1
MS.gene41647.t1 MTR_0246s0020 27.439 164 113 3 281 443 174 332 3.48e-14 74.7
MS.gene41647.t1 MTR_0246s0020 27.439 164 113 3 281 443 174 332 3.54e-14 74.3
MS.gene41647.t1 MTR_6g047570 28.804 184 120 3 305 487 160 333 4.11e-14 73.9
MS.gene41647.t1 MTR_4g057270 30.464 151 88 3 295 441 140 277 4.59e-14 73.6
MS.gene41647.t1 MTR_8g024770 32.911 158 98 4 302 458 277 427 6.93e-14 73.9
MS.gene41647.t1 MTR_8g098275 33.333 159 84 4 305 444 309 464 7.21e-14 74.3
MS.gene41647.t1 MTR_8g027495 50.000 78 34 1 302 374 456 533 7.60e-14 74.3
MS.gene41647.t1 MTR_8g024790 58.182 55 23 0 302 356 289 343 7.63e-14 73.9
MS.gene41647.t1 MTR_7g117670 52.239 67 32 0 302 368 400 466 9.71e-14 73.9
MS.gene41647.t1 MTR_4g092700 27.607 163 108 3 298 460 152 304 1.18e-13 72.4
MS.gene41647.t1 MTR_8g098275 33.333 159 84 4 305 444 402 557 1.19e-13 73.9
MS.gene41647.t1 MTR_4g067010 27.979 193 125 3 286 477 128 307 1.30e-13 72.4
MS.gene41647.t1 MTR_5g030430 29.851 201 108 6 302 486 491 674 1.31e-13 73.9
MS.gene41647.t1 MTR_4g009540 28.512 242 139 8 259 482 105 330 1.63e-13 72.0
MS.gene41647.t1 MTR_4g009540 28.704 216 124 7 259 460 105 304 1.82e-13 71.6
MS.gene41647.t1 MTR_5g014600 28.814 177 113 5 294 460 135 308 2.49e-13 71.6
MS.gene41647.t1 MTR_2g010450 27.564 156 104 2 305 460 178 324 3.78e-13 71.2
MS.gene41647.t1 MTR_4g066460 27.660 188 123 2 290 477 141 315 5.86e-13 70.5
MS.gene41647.t1 MTR_8g067280 34.615 156 97 3 302 454 460 613 6.33e-13 71.6
MS.gene41647.t1 MTR_7g096350 53.448 58 27 0 302 359 353 410 2.47e-12 69.3
MS.gene41647.t1 MTR_4g097950 28.902 173 107 4 274 443 47 206 5.56e-12 66.2
MS.gene41647.t1 MTR_4g091990 27.419 186 103 5 299 483 40 194 7.12e-12 65.1
MS.gene41647.t1 MTR_5g014640 27.429 175 107 5 304 472 154 314 1.33e-11 66.2
MS.gene41647.t1 MTR_0011s0260 28.177 181 104 5 305 477 184 346 1.43e-11 66.2
MS.gene41647.t1 MTR_2g104550 27.919 197 123 6 259 445 83 270 1.75e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41647.t1 AT3G26744 57.692 390 145 6 115 491 112 494 5.46e-135 399
MS.gene41647.t1 AT3G26744 57.692 390 145 6 115 491 112 494 5.46e-135 399
MS.gene41647.t1 AT3G26744 57.692 390 145 6 115 491 112 494 5.46e-135 399
MS.gene41647.t1 AT1G12860 68.707 294 66 5 203 491 178 450 2.70e-123 368
MS.gene41647.t1 AT3G26744 57.025 363 136 6 115 464 112 467 1.34e-118 357
MS.gene41647.t1 AT1G12860 68.914 267 57 5 203 464 178 423 1.08e-107 327
MS.gene41647.t1 AT5G65640 42.411 224 114 6 266 489 140 348 3.73e-36 137
MS.gene41647.t1 AT5G10570 43.077 195 83 4 297 489 144 312 1.34e-32 127
MS.gene41647.t1 AT3G26744 40.079 252 122 7 115 344 112 356 1.93e-32 127
MS.gene41647.t1 AT2G16910 39.378 193 104 3 303 483 313 504 4.17e-31 127
MS.gene41647.t1 AT1G12860 55.474 137 41 3 203 335 178 298 1.94e-27 112
MS.gene41647.t1 AT5G65640 62.500 88 32 1 273 359 146 233 1.60e-20 92.0
MS.gene41647.t1 AT5G57150 32.571 175 107 4 303 472 53 221 1.35e-16 79.7
MS.gene41647.t1 AT2G28160 29.121 182 119 2 260 441 89 260 4.62e-16 79.7
MS.gene41647.t1 AT2G28160 29.121 182 119 2 260 441 89 260 5.08e-16 79.3
MS.gene41647.t1 AT2G46510 42.857 98 48 1 270 359 353 450 1.21e-15 80.1
MS.gene41647.t1 AT5G57150 33.544 158 94 4 303 455 54 205 1.55e-15 76.3
MS.gene41647.t1 AT5G57150 33.544 158 94 4 303 455 54 205 1.62e-15 76.3
MS.gene41647.t1 AT5G57150 33.544 158 94 4 303 455 53 204 1.90e-15 75.9
MS.gene41647.t1 AT5G46760 32.124 193 111 7 302 488 413 591 4.61e-15 78.2
MS.gene41647.t1 AT5G57150 33.544 158 94 4 303 455 54 205 9.54e-15 74.7
MS.gene41647.t1 AT4G29930 29.412 153 90 3 303 455 53 187 1.25e-14 73.6
MS.gene41647.t1 AT4G29930 29.412 153 90 3 303 455 53 187 2.01e-14 73.2
MS.gene41647.t1 AT4G29930 28.758 153 94 1 303 455 53 190 2.24e-14 72.8
MS.gene41647.t1 AT4G29930 47.761 67 35 0 303 369 53 119 2.31e-14 72.0
MS.gene41647.t1 AT1G63650 30.822 146 93 2 307 444 408 553 3.86e-14 75.5
MS.gene41647.t1 AT1G63650 30.822 146 93 2 307 444 408 553 3.86e-14 75.5
MS.gene41647.t1 AT1G63650 30.822 146 93 2 307 444 408 553 3.86e-14 75.5
MS.gene41647.t1 AT4G17880 29.630 189 113 7 302 486 414 586 4.06e-14 75.1
MS.gene41647.t1 AT4G29930 47.761 67 35 0 303 369 53 119 4.87e-14 72.4
MS.gene41647.t1 AT4G29930 47.761 67 35 0 303 369 53 119 5.37e-14 72.4
MS.gene41647.t1 AT4G29930 47.761 67 35 0 303 369 53 119 5.37e-14 72.4
MS.gene41647.t1 AT1G32640 31.183 186 115 6 302 486 450 623 1.55e-13 73.6
MS.gene41647.t1 AT4G09820 34.437 151 66 5 297 444 353 473 1.92e-13 72.8
MS.gene41647.t1 AT1G01260 41.000 100 47 2 274 361 391 490 2.84e-13 72.8
MS.gene41647.t1 AT1G01260 41.000 100 47 2 274 361 391 490 2.84e-13 72.8
MS.gene41647.t1 AT1G01260 41.000 100 47 2 274 361 391 490 2.84e-13 72.8
MS.gene41647.t1 AT4G00870 47.761 67 33 1 297 361 240 306 4.94e-13 71.2
MS.gene41647.t1 AT4G37850 27.841 176 110 4 293 460 133 299 3.63e-12 67.8
MS.gene41647.t1 AT4G37850 27.841 176 110 4 293 460 133 299 3.63e-12 67.8
MS.gene41647.t1 AT4G16430 34.921 126 67 4 262 372 265 390 3.75e-12 68.9
MS.gene41647.t1 AT4G21330 31.343 201 112 6 291 483 19 201 2.77e-11 63.5
MS.gene41647.t1 AT1G10610 43.243 74 37 1 293 361 151 224 2.98e-11 65.5
MS.gene41647.t1 AT1G10610 43.243 74 37 1 293 361 218 291 3.78e-11 65.5
MS.gene41647.t1 AT1G10610 43.243 74 37 1 293 361 248 321 5.38e-11 65.1
MS.gene41647.t1 AT5G46830 29.348 184 110 7 302 482 341 507 5.47e-11 65.1

Find 124 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGATTCTTTGCCTTCTTC+TGG 0.160215 3.4:-88503006 MS.gene41647:CDS
AGTCTTACTTTGCTAATCTT+TGG 0.234140 3.4:+88502658 None:intergenic
ATGGATAGGGCTTCAATTCT+TGG 0.273781 3.4:-88502351 MS.gene41647:CDS
ATTGGGGCTTGGCAATGAGC+TGG 0.280404 3.4:+88502164 None:intergenic
AGGAAGGTCAAAAGGGTTAA+TGG 0.287266 3.4:+88503248 None:intergenic
ACCCTGGCAGGTTGGCCATT+GGG 0.297219 3.4:+88502147 None:intergenic
GTAGTAGTAGTAGCTGTTAA+TGG 0.300381 3.4:+88503138 None:intergenic
GCAGGTTGGCCATTGGGGCT+TGG 0.306907 3.4:+88502153 None:intergenic
CAGAACTCTCAAGAGGGTTC+TGG 0.318137 3.4:-88503051 MS.gene41647:CDS
TTTGACCTTCCTTGTGAACT+TGG 0.319070 3.4:-88503237 MS.gene41647:CDS
GTTGTTGTTGTCTGTTGTTA+TGG 0.320112 3.4:+88503529 None:intergenic
GTTGTCTGTTGTTATGGTTA+TGG 0.324297 3.4:+88503535 None:intergenic
TTGGGGCTTGGCAATGAGCT+GGG 0.337234 3.4:+88502165 None:intergenic
AAAGCAGATGAAGGAGTGTT+TGG 0.350468 3.4:+88503561 None:intergenic
ACCGACACCATCTTCGTTGC+CGG 0.353485 3.4:-88502211 MS.gene41647:CDS
AGTAAAACATTGTCTAAGTT+AGG 0.362524 3.4:+88503411 None:intergenic
GCCCCAATGGCCAACCTGCC+AGG 0.363430 3.4:-88502149 MS.gene41647:CDS
CATTGTTGATTTGAGGCAAA+TGG 0.366809 3.4:+88503088 None:intergenic
TTGGATTCAGCTGGCTTCAA+TGG 0.366974 3.4:-88501139 MS.gene41647:CDS
CAATGACCTTCATAATGAAT+TGG 0.368740 3.4:-88502289 MS.gene41647:CDS
GGAAGGTCAAAAGGGTTAAT+GGG 0.370616 3.4:+88503249 None:intergenic
TACCCTGGCAGGTTGGCCAT+TGG 0.374681 3.4:+88502146 None:intergenic
ATAGGTTGAGGTTCGGTTGC+GGG 0.376470 3.4:-88501564 MS.gene41647:intron
TCAAATCAACAATGCCTTCA+TGG 0.376926 3.4:-88503079 MS.gene41647:CDS
TGGATAGGGCTTCAATTCTT+GGG 0.384697 3.4:-88502350 MS.gene41647:CDS
GCTGTTATAAGTTGTTTCAA+TGG 0.387308 3.4:-88501440 MS.gene41647:CDS
GCTCTCAACCATGAGGGCTT+TGG 0.392480 3.4:-88501489 MS.gene41647:CDS
CTTCTTTCTCCGGCGACGTT+CGG 0.393892 3.4:+88502717 None:intergenic
GATGGTGTTGGTGTTGGTTG+AGG 0.406586 3.4:+88503318 None:intergenic
AGTACTGCTTTGATTTGCTC+TGG 0.407438 3.4:+88501163 None:intergenic
GAGCAACAGACCAGGTTTGC+GGG 0.411720 3.4:+88501508 None:intergenic
AAGCAGATGAAGGAGTGTTT+GGG 0.422902 3.4:+88503562 None:intergenic
AGGTTCGGTTGCGGGAAGGA+AGG 0.424401 3.4:-88501556 MS.gene41647:CDS
AGTTCACAAGGAAGGTCAAA+AGG 0.426484 3.4:+88503240 None:intergenic
CCCTGGCAGGTTGGCCATTG+GGG 0.427011 3.4:+88502148 None:intergenic
GTAAAACATTGTCTAAGTTA+GGG 0.430732 3.4:+88503412 None:intergenic
TATCATTGAGCTTCTTTCTC+CGG 0.430910 3.4:+88502707 None:intergenic
TTGATTCCAATTCATTATGA+AGG 0.439028 3.4:+88502283 None:intergenic
GCAAATCAAAGCAGTACTCT+TGG 0.442590 3.4:-88501158 MS.gene41647:CDS
ATTGTTGATTTGAGGCAAAT+GGG 0.443835 3.4:+88503089 None:intergenic
GGCATAGTTCTTCTTTGATA+CGG 0.452108 3.4:+88502187 None:intergenic
ATGAAGGCATTGTTGATTTG+AGG 0.454958 3.4:+88503081 None:intergenic
GAATTGGATGGTGTTGGTGT+TGG 0.455965 3.4:+88503312 None:intergenic
TTGTTTCAATGGATTTGCTA+TGG 0.459665 3.4:-88501429 MS.gene41647:CDS
GTTGTTCATTCTGGACATCA+TGG 0.460958 3.4:+88503641 None:intergenic
GTACTGAAGATGGTTGGAAT+TGG 0.462423 3.4:+88503296 None:intergenic
CAAATCAACAATGCCTTCAT+GGG 0.462470 3.4:-88503078 MS.gene41647:CDS
TCTTTCATCAAACCCATGCT+TGG 0.473324 3.4:-88503492 MS.gene41647:CDS
CTGCTTTGATTTGCTCTGGA+TGG 0.474350 3.4:+88501167 None:intergenic
TTTGGTTTGATAGATGGATA+GGG 0.478288 3.4:-88502364 MS.gene41647:intron
AATGCCTGCTAAGAATTTGA+TGG 0.480380 3.4:-88502740 MS.gene41647:CDS
AGAAGAAACGGAATCATTGA+TGG 0.481195 3.4:+88503383 None:intergenic
AACATGGGCAAGATTGAGAT+TGG 0.482512 3.4:-88502940 MS.gene41647:CDS
ATGAAGAAGGGTGTTGAAAA+CGG 0.485213 3.4:+88503341 None:intergenic
GTGAAGGGAGTGATAAGAAA+AGG 0.488278 3.4:-88502918 MS.gene41647:CDS
TGGGGCTTGGCAATGAGCTG+GGG 0.491361 3.4:+88502166 None:intergenic
TTCATCGATTTCACCAAGCA+TGG 0.492487 3.4:+88503479 None:intergenic
GAAGATGGTGTCGGTGTCAA+AGG 0.493431 3.4:+88502219 None:intergenic
GTAGGCTGTGTTCCAGAAGA+AGG 0.494407 3.4:+88502994 None:intergenic
GAATTGGAATCAACTCCTGC+TGG 0.496710 3.4:-88502273 MS.gene41647:CDS
GGTTCGGTTGCGGGAAGGAA+GGG 0.497387 3.4:-88501555 MS.gene41647:CDS
TATAGGTTGAGGTTCGGTTG+CGG 0.498455 3.4:-88501565 MS.gene41647:intron
ATGAGGGCTTTGGATAACCT+TGG 0.500549 3.4:-88501479 MS.gene41647:CDS
TCGGCCATCAAATTCTTAGC+AGG 0.504755 3.4:+88502736 None:intergenic
GCAGTACTCTTGGATTCAGC+TGG 0.509971 3.4:-88501148 MS.gene41647:CDS
AGGTGAACATGAAGAAGAAA+CGG 0.512576 3.4:+88503371 None:intergenic
AGAGCAACAGACCAGGTTTG+CGG 0.518682 3.4:+88501507 None:intergenic
GATCAGAAAGGGAAGAAGAA+AGG 0.526869 3.4:-88502763 MS.gene41647:CDS
AATATTGGAAATGGTTCCAA+TGG 0.527417 3.4:-88502802 MS.gene41647:CDS
ATGAAAGTACTGAAGATGGT+TGG 0.528381 3.4:+88503290 None:intergenic
ATTTGATGGCCGAACGTCGC+CGG 0.530116 3.4:-88502726 MS.gene41647:CDS
TCGATGAAGACGATGAAGAA+TGG 0.531477 3.4:-88503464 MS.gene41647:CDS
AAAGGATGGAAGCTTGAAGC+AGG 0.532982 3.4:+88502237 None:intergenic
AGTTCTTCTTTGATACGGCC+CGG 0.536230 3.4:+88502192 None:intergenic
AGTGACAGTGCTATTACCAT+TGG 0.536538 3.4:+88502786 None:intergenic
AGCTCATTGCCAAGCCCCAA+TGG 0.538619 3.4:-88502162 MS.gene41647:CDS
ATACGGCCCGGCAACGAAGA+TGG 0.543485 3.4:+88502204 None:intergenic
CCCCAATGGCCAACCTGCCA+GGG 0.545849 3.4:-88502148 MS.gene41647:intron
CCGACACCATCTTCGTTGCC+GGG 0.547698 3.4:-88502210 MS.gene41647:CDS
GCACTGTCACTGATCAGAAA+GGG 0.548791 3.4:-88502774 MS.gene41647:CDS
TCATCGATTTCACCAAGCAT+GGG 0.552156 3.4:+88503480 None:intergenic
GTTCACAAGGAAGGTCAAAA+GGG 0.555011 3.4:+88503241 None:intergenic
GAGGATGAAAGTACTGAAGA+TGG 0.555381 3.4:+88503286 None:intergenic
ACAAACAACATTACCCTGGC+AGG 0.556920 3.4:+88502135 None:intergenic
CAACAACAACAATGGTTGGA+TGG 0.558143 3.4:-88503616 MS.gene41647:CDS
GGCAAGATTGAGATTGGTGA+AGG 0.559559 3.4:-88502934 MS.gene41647:CDS
AGCACTGTCACTGATCAGAA+AGG 0.561565 3.4:-88502775 MS.gene41647:CDS
GATGATTTGACTGAGAGTAA+TGG 0.561773 3.4:-88502829 MS.gene41647:CDS
AAGGTTATCCAAAGCCCTCA+TGG 0.562752 3.4:+88501481 None:intergenic
ATGGTGTCGGTGTCAAAGGA+TGG 0.562953 3.4:+88502223 None:intergenic
TTTGCTAATCTTTGGAACAA+CGG 0.562953 3.4:+88502666 None:intergenic
GTCTGTTGCTCTCAACCATG+AGG 0.567620 3.4:-88501496 MS.gene41647:CDS
GAAAACCAAGTTCACAAGGA+AGG 0.585921 3.4:+88503232 None:intergenic
GGATAGGGCTTCAATTCTTG+GGG 0.587204 3.4:-88502349 MS.gene41647:CDS
GTGTTGGTTGAGGATGAAGA+AGG 0.588266 3.4:+88503328 None:intergenic
TTATGGATGAAAGCAGATGA+AGG 0.593844 3.4:+88503552 None:intergenic
TTGTTGATTTGAGGCAAATG+GGG 0.597247 3.4:+88503090 None:intergenic
GTTGAGGTTCGGTTGCGGGA+AGG 0.597960 3.4:-88501560 MS.gene41647:CDS
ATCTGAAGGAACTTCTGCAA+AGG 0.598091 3.4:-88502314 MS.gene41647:CDS
TCTGTTGCTCTCAACCATGA+GGG 0.601025 3.4:-88501495 MS.gene41647:CDS
CTTGCTGAATGTCTAATCCA+AGG 0.601261 3.4:+88501462 None:intergenic
ATGGTTGAGAGCAACAGACC+AGG 0.602316 3.4:+88501500 None:intergenic
AAGAAAAGGAAGTTCAGTGG+TGG 0.603486 3.4:-88502904 MS.gene41647:CDS
GATAAGAAAAGGAAGTTCAG+TGG 0.603790 3.4:-88502907 MS.gene41647:CDS
AGAGTTCTGAAACCCCATGA+AGG 0.606271 3.4:+88503065 None:intergenic
ACAACATTACCCTGGCAGGT+TGG 0.610361 3.4:+88502139 None:intergenic
TAAAACATTGTCTAAGTTAG+GGG 0.610771 3.4:+88503413 None:intergenic
TGTTGGTTGAGGATGAAGAA+GGG 0.614214 3.4:+88503329 None:intergenic
GGGGTTTCAGAACTCTCAAG+AGG 0.618750 3.4:-88503058 MS.gene41647:CDS
GGTGTTAGTGAAGATCCAGC+AGG 0.624647 3.4:+88502258 None:intergenic
TGATCATCAAGCTTCAGCAA+TGG 0.624760 3.4:-88503208 MS.gene41647:CDS
TGAAGATGGTTGGAATTGGA+TGG 0.631496 3.4:+88503300 None:intergenic
ATGATAGACTCTATATGCTG+AGG 0.634746 3.4:-88502690 MS.gene41647:CDS
TGGTTGGAATTGGATGGTGT+TGG 0.635315 3.4:+88503306 None:intergenic
GTGTTGAAAACGGAGGAAGA+AGG 0.636871 3.4:+88503351 None:intergenic
GGATGCAATTGAGTATCTGA+AGG 0.640786 3.4:-88502328 MS.gene41647:CDS
TCAAGAAAACCAAGTTCACA+AGG 0.642271 3.4:+88503228 None:intergenic
AAGAAGGGTGTTGAAAACGG+AGG 0.649568 3.4:+88503344 None:intergenic
AAATCAACAATGCCTTCATG+GGG 0.651364 3.4:-88503077 MS.gene41647:CDS
GGGTTTCAGAACTCTCAAGA+GGG 0.655642 3.4:-88503057 MS.gene41647:CDS
GAAGAAGGCAAAGAATCAAG+TGG 0.655817 3.4:+88503009 None:intergenic
CCCGGCAACGAAGATGGTGT+CGG 0.657605 3.4:+88502210 None:intergenic
GCAAGATTGAGATTGGTGAA+GGG 0.659732 3.4:-88502933 MS.gene41647:CDS
GTTTGCGGGTACAAAACATG+TGG 0.680602 3.4:+88501522 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGCATTATTAATCAAAA+AGG + chr3.4:88502204-88502223 None:intergenic 15.0%
!!! GTTATTTTCATTTTTTGTAT+AGG - chr3.4:88503186-88503205 MS.gene41647:CDS 15.0%
!! AATGGAAAAAATATTGGAAA+TGG - chr3.4:88501957-88501976 MS.gene41647:intron 20.0%
!! TTGAAATACTGAAATTAAAG+AGG + chr3.4:88502151-88502170 None:intergenic 20.0%
!! TTGTTTATTTATTGTGATTG+AGG - chr3.4:88503522-88503541 MS.gene41647:CDS 20.0%
!!! ATCAAATTCTTTAAGAATCA+TGG + chr3.4:88502240-88502259 None:intergenic 20.0%
! AGTAAAACATTGTCTAAGTT+AGG + chr3.4:88501360-88501379 None:intergenic 25.0%
! ATTCCTAAAACTAGAAATAG+TGG - chr3.4:88502725-88502744 MS.gene41647:CDS 25.0%
! GTAAAACATTGTCTAAGTTA+GGG + chr3.4:88501359-88501378 None:intergenic 25.0%
! TAAAACATTGTCTAAGTTAG+GGG + chr3.4:88501358-88501377 None:intergenic 25.0%
! TAAGGATTAAGGAGTAATTA+TGG - chr3.4:88502280-88502299 MS.gene41647:CDS 25.0%
! TTAACTTAGTATCTTGCTTA+CGG - chr3.4:88503402-88503421 MS.gene41647:CDS 25.0%
! TTGATTCCAATTCATTATGA+AGG + chr3.4:88502488-88502507 None:intergenic 25.0%
! TTGTAAAATTCAAATGTTGC+TGG + chr3.4:88502836-88502855 None:intergenic 25.0%
!! AGATTGATAATATGTCTTGA+AGG - chr3.4:88502317-88502336 MS.gene41647:CDS 25.0%
!! ATTCTTTAAGAATCATGGAT+TGG + chr3.4:88502235-88502254 None:intergenic 25.0%
!! GAGAGTAATGGAAAAAATAT+TGG - chr3.4:88501951-88501970 MS.gene41647:intron 25.0%
!!! ACTTATGATTGTTATTTACC+CGG - chr3.4:88503070-88503089 MS.gene41647:CDS 25.0%
!!! ATGTTTTTTGGTTTGATAGA+TGG - chr3.4:88502398-88502417 MS.gene41647:intron 25.0%
!!! ATTGATGATTTGAGTTTTGA+TGG - chr3.4:88501894-88501913 MS.gene41647:intron 25.0%
!!! TTAATGGGTTTTTGATTTTG+AGG + chr3.4:88501507-88501526 None:intergenic 25.0%
!!! TTCATTTTTTGTATAGGTTG+AGG - chr3.4:88503192-88503211 MS.gene41647:CDS 25.0%
!!! TTGATGATTTGAGTTTTGAT+GGG - chr3.4:88501895-88501914 MS.gene41647:intron 25.0%
AACAACAACAACAACAACAA+TGG - chr3.4:88501144-88501163 MS.gene41647:CDS 30.0%
AAGATTGATAAATCTAGACC+GGG + chr3.4:88503091-88503110 None:intergenic 30.0%
AATATTGGAAATGGTTCCAA+TGG - chr3.4:88501966-88501985 MS.gene41647:intron 30.0%
AATTTGATCTGAGTCATTGT+TGG - chr3.4:88502252-88502271 MS.gene41647:CDS 30.0%
AGTCTTACTTTGCTAATCTT+TGG + chr3.4:88502113-88502132 None:intergenic 30.0%
ATTTGATCTGAGTCATTGTT+GGG - chr3.4:88502253-88502272 MS.gene41647:CDS 30.0%
CAAGATTGATAAATCTAGAC+CGG + chr3.4:88503092-88503111 None:intergenic 30.0%
CAATGACCTTCATAATGAAT+TGG - chr3.4:88502479-88502498 MS.gene41647:intron 30.0%
CATTCAATACTTTCTGCATT+TGG - chr3.4:88503430-88503449 MS.gene41647:CDS 30.0%
TGAGCAAATATCTAAGCAAA+AGG + chr3.4:88502680-88502699 None:intergenic 30.0%
TTATTGTGATTGAGGTGTAA+AGG - chr3.4:88503530-88503549 MS.gene41647:CDS 30.0%
! AATGGCTACTTCTTCTTTTA+TGG - chr3.4:88501578-88501597 MS.gene41647:intron 30.0%
! ATGGCTACTTCTTCTTTTAT+GGG - chr3.4:88501579-88501598 MS.gene41647:intron 30.0%
! GCTGTTATAAGTTGTTTCAA+TGG - chr3.4:88503328-88503347 MS.gene41647:CDS 30.0%
! TATCAATCTTGGTTTGACAT+AGG - chr3.4:88503101-88503120 MS.gene41647:CDS 30.0%
! TTCTGCATTTGGTAATCAAA+AGG - chr3.4:88503441-88503460 MS.gene41647:CDS 30.0%
!! ACTTTAAAGCACACAAACAA+AGG + chr3.4:88503001-88503020 None:intergenic 30.0%
!! ATTGTTGATTTGAGGCAAAT+GGG + chr3.4:88501682-88501701 None:intergenic 30.0%
!! TTGTTTCAATGGATTTGCTA+TGG - chr3.4:88503339-88503358 MS.gene41647:CDS 30.0%
!! TTTGCTAATCTTTGGAACAA+CGG + chr3.4:88502105-88502124 None:intergenic 30.0%
!! TTTGGTTTGATAGATGGATA+GGG - chr3.4:88502404-88502423 MS.gene41647:intron 30.0%
!! TTTTTGTATAGGTTGAGGTT+CGG - chr3.4:88503197-88503216 MS.gene41647:CDS 30.0%
!!! ACACCACTATTTCTAGTTTT+AGG + chr3.4:88502731-88502750 None:intergenic 30.0%
!!! TTTTGGTTTGATAGATGGAT+AGG - chr3.4:88502403-88502422 MS.gene41647:intron 30.0%
AAATCAACAATGCCTTCATG+GGG - chr3.4:88501691-88501710 MS.gene41647:intron 35.0%
AATGCCTGCTAAGAATTTGA+TGG - chr3.4:88502028-88502047 MS.gene41647:intron 35.0%
ACAAACAAACAACATTACCC+TGG + chr3.4:88502640-88502659 None:intergenic 35.0%
ACAACAACAACAACAATGGT+TGG - chr3.4:88501148-88501167 MS.gene41647:CDS 35.0%
AGAAGAAACGGAATCATTGA+TGG + chr3.4:88501388-88501407 None:intergenic 35.0%
AGGTGAACATGAAGAAGAAA+CGG + chr3.4:88501400-88501419 None:intergenic 35.0%
ATGATAGACTCTATATGCTG+AGG - chr3.4:88502078-88502097 MS.gene41647:intron 35.0%
CAAATCAACAATGCCTTCAT+GGG - chr3.4:88501690-88501709 MS.gene41647:intron 35.0%
CGGTCTAGATTTATCAATCT+TGG - chr3.4:88503090-88503109 MS.gene41647:CDS 35.0%
GATAAGAAAAGGAAGTTCAG+TGG - chr3.4:88501861-88501880 MS.gene41647:intron 35.0%
GATGATTTGACTGAGAGTAA+TGG - chr3.4:88501939-88501958 MS.gene41647:intron 35.0%
GCATTGCTGTAAAAGAAGAA+AGG + chr3.4:88503564-88503583 None:intergenic 35.0%
GGCATAGTTCTTCTTTGATA+CGG + chr3.4:88502584-88502603 None:intergenic 35.0%
GTAGTAGTAGTAGCTGTTAA+TGG + chr3.4:88501633-88501652 None:intergenic 35.0%
GTTGTCTGTTGTTATGGTTA+TGG + chr3.4:88501236-88501255 None:intergenic 35.0%
TATCATTGAGCTTCTTTCTC+CGG + chr3.4:88502064-88502083 None:intergenic 35.0%
TCAAATCAACAATGCCTTCA+TGG - chr3.4:88501689-88501708 MS.gene41647:intron 35.0%
TCAAGAAAACCAAGTTCACA+AGG + chr3.4:88501543-88501562 None:intergenic 35.0%
TGTTGGGGTAATAAGGATTA+AGG - chr3.4:88502269-88502288 MS.gene41647:CDS 35.0%
TTATGGATGAAAGCAGATGA+AGG + chr3.4:88501219-88501238 None:intergenic 35.0%
TTGCTGTAAAAGAAGAAAGG+AGG + chr3.4:88503561-88503580 None:intergenic 35.0%
TTTGATCTGAGTCATTGTTG+GGG - chr3.4:88502254-88502273 MS.gene41647:CDS 35.0%
! CTTTTACAGCAATGCAAAGA+AGG - chr3.4:88503569-88503588 MS.gene41647:CDS 35.0%
! GTTGTTGTTGTCTGTTGTTA+TGG + chr3.4:88501242-88501261 None:intergenic 35.0%
! GTTGTTGTTGTTGTTCATTC+TGG + chr3.4:88501139-88501158 None:intergenic 35.0%
! TATGGATATTTTCAGAGCTG+AGG - chr3.4:88503357-88503376 MS.gene41647:CDS 35.0%
! TGTTGTTTAGTTGCTGTGAT+TGG - chr3.4:88502349-88502368 MS.gene41647:CDS 35.0%
!! ACTGAACTTCTGCTTGTTTT+AGG - chr3.4:88503024-88503043 MS.gene41647:CDS 35.0%
!! ATGAAAGTACTGAAGATGGT+TGG + chr3.4:88501481-88501500 None:intergenic 35.0%
!! ATGAAGAAGGGTGTTGAAAA+CGG + chr3.4:88501430-88501449 None:intergenic 35.0%
!! ATGAAGGCATTGTTGATTTG+AGG + chr3.4:88501690-88501709 None:intergenic 35.0%
!! CATTGTTGATTTGAGGCAAA+TGG + chr3.4:88501683-88501702 None:intergenic 35.0%
!! TTGTTGATTTGAGGCAAATG+GGG + chr3.4:88501681-88501700 None:intergenic 35.0%
!!! ATGGGTTTTTGATTTTGAGG+AGG + chr3.4:88501504-88501523 None:intergenic 35.0%
!!! CTGAACTTCTGCTTGTTTTA+GGG - chr3.4:88503025-88503044 MS.gene41647:CDS 35.0%
!!! GGATTCTGTGACATGTTTTT+TGG - chr3.4:88502386-88502405 MS.gene41647:intron 35.0%
AAAAGGACAAGTTCCAGCAT+TGG + chr3.4:88502663-88502682 None:intergenic 40.0%
AACATGGGCAAGATTGAGAT+TGG - chr3.4:88501828-88501847 MS.gene41647:intron 40.0%
AAGAAAAGGAAGTTCAGTGG+TGG - chr3.4:88501864-88501883 MS.gene41647:intron 40.0%
AGGAAGGTCAAAAGGGTTAA+TGG + chr3.4:88501523-88501542 None:intergenic 40.0%
AGTTCACAAGGAAGGTCAAA+AGG + chr3.4:88501531-88501550 None:intergenic 40.0%
ATCTGAAGGAACTTCTGCAA+AGG - chr3.4:88502454-88502473 MS.gene41647:intron 40.0%
ATGGATAGGGCTTCAATTCT+TGG - chr3.4:88502417-88502436 MS.gene41647:intron 40.0%
CAACAACAACAATGGTTGGA+TGG - chr3.4:88501152-88501171 MS.gene41647:CDS 40.0%
CTTGATTCTTTGCCTTCTTC+TGG - chr3.4:88501762-88501781 MS.gene41647:intron 40.0%
CTTGCTGAATGTCTAATCCA+AGG + chr3.4:88503309-88503328 None:intergenic 40.0%
GAAAACCAAGTTCACAAGGA+AGG + chr3.4:88501539-88501558 None:intergenic 40.0%
GAAGAAGGCAAAGAATCAAG+TGG + chr3.4:88501762-88501781 None:intergenic 40.0%
GAGTCATTGTTGGGGTAATA+AGG - chr3.4:88502262-88502281 MS.gene41647:CDS 40.0%
GATCAGAAAGGGAAGAAGAA+AGG - chr3.4:88502005-88502024 MS.gene41647:intron 40.0%
GCAAATCAAAGCAGTACTCT+TGG - chr3.4:88503610-88503629 MS.gene41647:CDS 40.0%
GCAAGATTGAGATTGGTGAA+GGG - chr3.4:88501835-88501854 MS.gene41647:intron 40.0%
GGAAGGTCAAAAGGGTTAAT+GGG + chr3.4:88501522-88501541 None:intergenic 40.0%
GGATGCAATTGAGTATCTGA+AGG - chr3.4:88502440-88502459 MS.gene41647:intron 40.0%
GTACTGAAGATGGTTGGAAT+TGG + chr3.4:88501475-88501494 None:intergenic 40.0%
GTGAAGGGAGTGATAAGAAA+AGG - chr3.4:88501850-88501869 MS.gene41647:intron 40.0%
GTTCACAAGGAAGGTCAAAA+GGG + chr3.4:88501530-88501549 None:intergenic 40.0%
GTTGTTTGTTTGTCCAATGC+TGG - chr3.4:88502647-88502666 MS.gene41647:intron 40.0%
TCGATGAAGACGATGAAGAA+TGG - chr3.4:88501304-88501323 MS.gene41647:intron 40.0%
TCTTTCATCAAACCCATGCT+TGG - chr3.4:88501276-88501295 MS.gene41647:intron 40.0%
TGAAGATGGTTGGAATTGGA+TGG + chr3.4:88501471-88501490 None:intergenic 40.0%
TGATCATCAAGCTTCAGCAA+TGG - chr3.4:88501560-88501579 MS.gene41647:CDS 40.0%
TGGATAGGGCTTCAATTCTT+GGG - chr3.4:88502418-88502437 MS.gene41647:intron 40.0%
TGTTTAGTTGCTGTGATTGG+TGG - chr3.4:88502352-88502371 MS.gene41647:CDS 40.0%
TTTGACCTTCCTTGTGAACT+TGG - chr3.4:88501531-88501550 MS.gene41647:CDS 40.0%
! AGCAGCACTGAGAAAAAACA+TGG - chr3.4:88501812-88501831 MS.gene41647:intron 40.0%
! AGTGACAGTGCTATTACCAT+TGG + chr3.4:88501985-88502004 None:intergenic 40.0%
! GCAGCACTGAGAAAAAACAT+GGG - chr3.4:88501813-88501832 MS.gene41647:intron 40.0%
! TGTTGGTTGAGGATGAAGAA+GGG + chr3.4:88501442-88501461 None:intergenic 40.0%
!! AAAGCAGATGAAGGAGTGTT+TGG + chr3.4:88501210-88501229 None:intergenic 40.0%
!! AAGCAGATGAAGGAGTGTTT+GGG + chr3.4:88501209-88501228 None:intergenic 40.0%
!! AGTACTGCTTTGATTTGCTC+TGG + chr3.4:88503608-88503627 None:intergenic 40.0%
!! GAGGATGAAAGTACTGAAGA+TGG + chr3.4:88501485-88501504 None:intergenic 40.0%
!! GATTTGAGTTTTGATGGGTC+TGG - chr3.4:88501900-88501919 MS.gene41647:intron 40.0%
!! TCATCGATTTCACCAAGCAT+GGG + chr3.4:88501291-88501310 None:intergenic 40.0%
!! TTCATCGATTTCACCAAGCA+TGG + chr3.4:88501292-88501311 None:intergenic 40.0%
!!! AACTTCTGCTTGTTTTAGGG+TGG - chr3.4:88503028-88503047 MS.gene41647:CDS 40.0%
!!! CTGGAAAGTCACTGTTTTTG+AGG - chr3.4:88501736-88501755 MS.gene41647:intron 40.0%
!!! GCTCTTTTCTGAAACAGAGT+AGG + chr3.4:88501795-88501814 None:intergenic 40.0%
!!! TGCTTGTTTTAGGGTGGAAA+TGG - chr3.4:88503034-88503053 MS.gene41647:CDS 40.0%
AAACTTGCCTGTGGATATGG+GGG - chr3.4:88502775-88502794 MS.gene41647:CDS 45.0%
AAAGGATGGAAGCTTGAAGC+AGG + chr3.4:88502534-88502553 None:intergenic 45.0%
AAGGTTATCCAAAGCCCTCA+TGG + chr3.4:88503290-88503309 None:intergenic 45.0%
ACAAACAACATTACCCTGGC+AGG + chr3.4:88502636-88502655 None:intergenic 45.0%
AGCAAACTTGCCTGTGGATA+TGG - chr3.4:88502772-88502791 MS.gene41647:CDS 45.0%
AGCACTGTCACTGATCAGAA+AGG - chr3.4:88501993-88502012 MS.gene41647:intron 45.0%
AGTTCTTCTTTGATACGGCC+CGG + chr3.4:88502579-88502598 None:intergenic 45.0%
CAAACTTGCCTGTGGATATG+GGG - chr3.4:88502774-88502793 MS.gene41647:CDS 45.0%
CTGGAACGTACGATCAAGAT+TGG + chr3.4:88502936-88502955 None:intergenic 45.0%
GAATTGGAATCAACTCCTGC+TGG - chr3.4:88502495-88502514 MS.gene41647:intron 45.0%
GCAAACTTGCCTGTGGATAT+GGG - chr3.4:88502773-88502792 MS.gene41647:CDS 45.0%
GCACTGTCACTGATCAGAAA+GGG - chr3.4:88501994-88502013 MS.gene41647:intron 45.0%
GGATAGGGCTTCAATTCTTG+GGG - chr3.4:88502419-88502438 MS.gene41647:intron 45.0%
GGCAAGATTGAGATTGGTGA+AGG - chr3.4:88501834-88501853 MS.gene41647:intron 45.0%
GGGTTTCAGAACTCTCAAGA+GGG - chr3.4:88501711-88501730 MS.gene41647:intron 45.0%
GTGTTGAAAACGGAGGAAGA+AGG + chr3.4:88501420-88501439 None:intergenic 45.0%
GTTTGCGGGTACAAAACATG+TGG + chr3.4:88503249-88503268 None:intergenic 45.0%
TCGGCCATCAAATTCTTAGC+AGG + chr3.4:88502035-88502054 None:intergenic 45.0%
TCTGTTGCTCTCAACCATGA+GGG - chr3.4:88503273-88503292 MS.gene41647:CDS 45.0%
TGGTTGGAATTGGATGGTGT+TGG + chr3.4:88501465-88501484 None:intergenic 45.0%
TTGATCGTACGTTCCAGATG+TGG - chr3.4:88502939-88502958 MS.gene41647:CDS 45.0%
! ATGTTTTGTACCCGCAAACC+TGG - chr3.4:88503250-88503269 MS.gene41647:CDS 45.0%
! TATAGGTTGAGGTTCGGTTG+CGG - chr3.4:88503203-88503222 MS.gene41647:CDS 45.0%
! TTGGATTCAGCTGGCTTCAA+TGG - chr3.4:88503629-88503648 MS.gene41647:CDS 45.0%
!! AAGAAGGGTGTTGAAAACGG+AGG + chr3.4:88501427-88501446 None:intergenic 45.0%
!! AGAGTTCTGAAACCCCATGA+AGG + chr3.4:88501706-88501725 None:intergenic 45.0%
!! ATGAGGGCTTTGGATAACCT+TGG - chr3.4:88503289-88503308 MS.gene41647:CDS 45.0%
!! CTGCTTTGATTTGCTCTGGA+TGG + chr3.4:88503604-88503623 None:intergenic 45.0%
!! GAATTGGATGGTGTTGGTGT+TGG + chr3.4:88501459-88501478 None:intergenic 45.0%
!! GTGTTGGTTGAGGATGAAGA+AGG + chr3.4:88501443-88501462 None:intergenic 45.0%
!! TGATTGGTGGTGTGGATCTA+TGG - chr3.4:88502365-88502384 MS.gene41647:intron 45.0%
AACACAACCCCCATATCCAC+AGG + chr3.4:88502785-88502804 None:intergenic 50.0%
ACAACATTACCCTGGCAGGT+TGG + chr3.4:88502632-88502651 None:intergenic 50.0%
ACAGCTAGCAAACTTGCCTG+TGG - chr3.4:88502766-88502785 MS.gene41647:CDS 50.0%
AGAGCAACAGACCAGGTTTG+CGG + chr3.4:88503264-88503283 None:intergenic 50.0%
ATGGTTGAGAGCAACAGACC+AGG + chr3.4:88503271-88503290 None:intergenic 50.0%
CAGAACTCTCAAGAGGGTTC+TGG - chr3.4:88501717-88501736 MS.gene41647:intron 50.0%
CTGGTTGCATACAGTCACAG+AGG + chr3.4:88502817-88502836 None:intergenic 50.0%
GCAGTACTCTTGGATTCAGC+TGG - chr3.4:88503620-88503639 MS.gene41647:CDS 50.0%
GGGGTTTCAGAACTCTCAAG+AGG - chr3.4:88501710-88501729 MS.gene41647:intron 50.0%
GGTGTTAGTGAAGATCCAGC+AGG + chr3.4:88502513-88502532 None:intergenic 50.0%
GTAGGCTGTGTTCCAGAAGA+AGG + chr3.4:88501777-88501796 None:intergenic 50.0%
GTCTGTTGCTCTCAACCATG+AGG - chr3.4:88503272-88503291 MS.gene41647:CDS 50.0%
TACACGCACTTAGCCACATC+TGG + chr3.4:88502955-88502974 None:intergenic 50.0%
! ATAGGTTGAGGTTCGGTTGC+GGG - chr3.4:88503204-88503223 MS.gene41647:CDS 50.0%
!! AGTTGCTGTGATTGGTGGTG+TGG - chr3.4:88502357-88502376 MS.gene41647:intron 50.0%
!! ATGGTGTCGGTGTCAAAGGA+TGG + chr3.4:88502548-88502567 None:intergenic 50.0%
!! GAAGATGGTGTCGGTGTCAA+AGG + chr3.4:88502552-88502571 None:intergenic 50.0%
!! GATGGTGTTGGTGTTGGTTG+AGG + chr3.4:88501453-88501472 None:intergenic 50.0%
ACCGACACCATCTTCGTTGC+CGG - chr3.4:88502557-88502576 MS.gene41647:intron 55.0%
AGCTCATTGCCAAGCCCCAA+TGG - chr3.4:88502606-88502625 MS.gene41647:intron 55.0%
ATTGGGGCTTGGCAATGAGC+TGG + chr3.4:88502607-88502626 None:intergenic 55.0%
CTTCTTTCTCCGGCGACGTT+CGG + chr3.4:88502054-88502073 None:intergenic 55.0%
GAGCAACAGACCAGGTTTGC+GGG + chr3.4:88503263-88503282 None:intergenic 55.0%
GCTCTCAACCATGAGGGCTT+TGG - chr3.4:88503279-88503298 MS.gene41647:CDS 55.0%
TTGGGGCTTGGCAATGAGCT+GGG + chr3.4:88502606-88502625 None:intergenic 55.0%
! ATTTGATGGCCGAACGTCGC+CGG - chr3.4:88502042-88502061 MS.gene41647:intron 55.0%
ATACGGCCCGGCAACGAAGA+TGG + chr3.4:88502567-88502586 None:intergenic 60.0%
CCCGGCAACGAAGATGGTGT+CGG + chr3.4:88502561-88502580 None:intergenic 60.0%
CCGACACCATCTTCGTTGCC+GGG - chr3.4:88502558-88502577 MS.gene41647:intron 60.0%
TGGGGCTTGGCAATGAGCTG+GGG + chr3.4:88502605-88502624 None:intergenic 60.0%
! ACCCTGGCAGGTTGGCCATT+GGG + chr3.4:88502624-88502643 None:intergenic 60.0%
! AGGTTCGGTTGCGGGAAGGA+AGG - chr3.4:88503212-88503231 MS.gene41647:CDS 60.0%
! GGTTCGGTTGCGGGAAGGAA+GGG - chr3.4:88503213-88503232 MS.gene41647:CDS 60.0%
! GTTGAGGTTCGGTTGCGGGA+AGG - chr3.4:88503208-88503227 MS.gene41647:CDS 60.0%
! TACCCTGGCAGGTTGGCCAT+TGG + chr3.4:88502625-88502644 None:intergenic 60.0%
CCCCAATGGCCAACCTGCCA+GGG - chr3.4:88502620-88502639 MS.gene41647:intron 65.0%
! CCCTGGCAGGTTGGCCATTG+GGG + chr3.4:88502623-88502642 None:intergenic 65.0%
! GCAGGTTGGCCATTGGGGCT+TGG + chr3.4:88502618-88502637 None:intergenic 65.0%
GCCCCAATGGCCAACCTGCC+AGG - chr3.4:88502619-88502638 MS.gene41647:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 88501129 88503661 88501129 ID=MS.gene41647
chr3.4 mRNA 88501129 88503661 88501129 ID=MS.gene41647.t1;Parent=MS.gene41647
chr3.4 exon 88502666 88503661 88502666 ID=MS.gene41647.t1.exon1;Parent=MS.gene41647.t1
chr3.4 CDS 88502666 88503661 88502666 ID=cds.MS.gene41647.t1;Parent=MS.gene41647.t1
chr3.4 exon 88502149 88502373 88502149 ID=MS.gene41647.t1.exon2;Parent=MS.gene41647.t1
chr3.4 CDS 88502149 88502373 88502149 ID=cds.MS.gene41647.t1;Parent=MS.gene41647.t1
chr3.4 exon 88501412 88501582 88501412 ID=MS.gene41647.t1.exon3;Parent=MS.gene41647.t1
chr3.4 CDS 88501412 88501582 88501412 ID=cds.MS.gene41647.t1;Parent=MS.gene41647.t1
chr3.4 exon 88501129 88501212 88501129 ID=MS.gene41647.t1.exon4;Parent=MS.gene41647.t1
chr3.4 CDS 88501129 88501212 88501129 ID=cds.MS.gene41647.t1;Parent=MS.gene41647.t1
Gene Sequence

>MS.gene41647

ATGATGTCCAGAATGAACAACAACAACAACAACAATGGTTGGATGGAAGAAAGAGAAGACGAAAACAACACTACAAACCCAAACACTCCTTCATCTGCTTTCATCCATAACCATAACAACAGACAACAACAACAACAAGATTTCTCTTCTTTCATCAAACCCATGCTTGGTGAAATCGATGAAGACGATGAAGAATGGTACATCAGAGACATGTCTTTTTCTTCTTCCCCTAACTTAGACAATGTTTTACTTCACACCATCAATGATTCCGTTTCTTCTTCATGTTCACCTTCTTCCTCCGTTTTCAACACCCTTCTTCATCCTCAACCAACACCAACACCATCCAATTCCAACCATCTTCAGTACTTTCATCCTCCTCAAAATCAAAAACCCATTAACCCTTTTGACCTTCCTTGTGAACTTGGTTTTCTTGATCATCAAGCTTCAGCAATGGCTACTTCTTCTTTTATGGGTAGTTTCGTTGATTTCGCTTCGAAAACTCCATTAACAGCTACTACTACTACTACTACTACTACTCAGTTGAGCTTGCCCCATTTGCCTCAAATCAACAATGCCTTCATGGGGTTTCAGAACTCTCAAGAGGGTTCTGGAAAGTCACTGTTTTTGAGGCCACTTGATTCTTTGCCTTCTTCTGGAACACAGCCTACTCTGTTTCAGAAAAGAGCAGCACTGAGAAAAAACATGGGCAAGATTGAGATTGGTGAAGGGAGTGATAAGAAAAGGAAGTTCAGTGGTGGAGATGAAATTGATGATTTGAGTTTTGATGGGTCTGGTTTGAACTATGATTCTGATGATTTGACTGAGAGTAATGGAAAAAATATTGGAAATGGTTCCAATGGTAATAGCACTGTCACTGATCAGAAAGGGAAGAAGAAAGGAATGCCTGCTAAGAATTTGATGGCCGAACGTCGCCGGAGAAAGAAGCTCAATGATAGACTCTATATGCTGAGGTCCGTTGTTCCAAAGATTAGCAAAGTAAGACTTTTAATTTTTCAAAGCCTCTTTAATTTCAGTATTTCAAGTTCTTAAAGTGTTTAGAGAGTTTCATTTTCCTTTTTGATTAATAATGCTTATGTTAGTTTCCAATCCATGATTCTTAAAGAATTTGATCTGAGTCATTGTTGGGGTAATAAGGATTAAGGAGTAATTATGGTAATTAGCTAATTAAGATTGATAATATGTCTTGAAGGCTTTAATTGTGTTGTTTAGTTGCTGTGATTGGTGGTGTGGATCTATGGATTCTGTGACATGTTTTTTGGTTTGATAGATGGATAGGGCTTCAATTCTTGGGGATGCAATTGAGTATCTGAAGGAACTTCTGCAAAGGATCAATGACCTTCATAATGAATTGGAATCAACTCCTGCTGGATCTTCACTAACACCTGCTTCAAGCTTCCATCCTTTGACACCGACACCATCTTCGTTGCCGGGCCGTATCAAAGAAGAACTATGCCCCAGCTCATTGCCAAGCCCCAATGGCCAACCTGCCAGGGTAATGTTGTTTGTTTGTCCAATGCTGGAACTTGTCCTTTTGCTTAGATATTTGCTCAAAATCACATTGCTTTCTTACTTTGTATTCCTAAAACTAGAAATAGTGGTGTGTATATTGACATTTGACAGCTAGCAAACTTGCCTGTGGATATGGGGGTTGTGTTCAATCACAACCTCTGTGACTGTATGCAACCAGCAACATTTGAATTTTACAATCAAGATTAGACTGTCTAGATTTCAAGTTCAGTATTTTAAATTTAAAAATCAAAATCTACATTAAAATATTGACAGTCCAATCTTGATCGTACGTTCCAGATGTGGCTAAGTGCGTGTATTCACGATGCACGCAATCAAAATCCTTTGTTTGTGTGCTTTAAAGTGAAACTGAACTTCTGCTTGTTTTAGGGTGGAAATGGAACGAGTCATGTAACTTATGATTGTTATTTACCCGGTCTAGATTTATCAATCTTGGTTTGACATAGGCTTAGATACACATTTGAGCATTGTTTGTCAATAGAAAGTTTTCTTGATGTCACTGTGCAATTGTTATTTTCATTTTTTGTATAGGTTGAGGTTCGGTTGCGGGAAGGAAGGGCTGTAAATATCCACATGTTTTGTACCCGCAAACCTGGTCTGTTGCTCTCAACCATGAGGGCTTTGGATAACCTTGGATTAGACATTCAGCAAGCTGTTATAAGTTGTTTCAATGGATTTGCTATGGATATTTTCAGAGCTGAGGTAAAAAAAACAAACGCATTCATTTAACTTAGTATCTTGCTTACGGTAGAACATTCAATACTTTCTGCATTTGGTAATCAAAAGGATTTACAACAATTCATTACAAAATAACTACAATTAGACATTCTGCAAACTGTTATAAGTTGTTTATTTATTGTGATTGAGGTGTAAAGGCTAAACCTCCTTTCTTCTTTTACAGCAATGCAAAGAAGGTCAAGATGTCCATCCAGAGCAAATCAAAGCAGTACTCTTGGATTCAGCTGGCTTCAATGGCATGATCTAA
Protein sequence

>MS.gene41647.t1

MMSRMNNNNNNNGWMEEREDENNTTNPNTPSSAFIHNHNNRQQQQQDFSSFIKPMLGEIDEDDEEWYIRDMSFSSSPNLDNVLLHTINDSVSSSCSPSSSVFNTLLHPQPTPTPSNSNHLQYFHPPQNQKPINPFDLPCELGFLDHQASAMATSSFMGSFVDFASKTPLTATTTTTTTTQLSLPHLPQINNAFMGFQNSQEGSGKSLFLRPLDSLPSSGTQPTLFQKRAALRKNMGKIEIGEGSDKKRKFSGGDEIDDLSFDGSGLNYDSDDLTESNGKNIGNGSNGNSTVTDQKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTPAGSSLTPASSFHPLTPTPSSLPGRIKEELCPSSLPSPNGQPARVEVRLREGRAVNIHMFCTRKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQIKAVLLDSAGFNGMI