AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42351

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42351.t1 MTR_4g059870 45.879 364 149 8 18 362 34 368 9.84e-103 314
MS.gene42351.t1 MTR_8g017210 49.292 353 133 9 16 355 56 375 5.23e-101 310
MS.gene42351.t1 MTR_2g099990 50.000 334 134 7 20 351 44 346 7.18e-101 308
MS.gene42351.t1 MTR_1g094115 76.829 164 37 1 20 183 45 207 9.93e-97 300
MS.gene42351.t1 MTR_2g090745 47.507 341 142 7 32 342 17 350 2.98e-93 287
MS.gene42351.t1 MTR_2g093960 72.892 166 45 0 22 187 32 197 9.62e-93 286
MS.gene42351.t1 MTR_1g112270 74.684 158 39 1 25 182 47 203 2.57e-91 287
MS.gene42351.t1 MTR_1g112270 69.822 169 39 2 25 182 47 214 1.20e-87 278
MS.gene42351.t1 MTR_2g099990 47.078 308 130 7 46 351 1 277 5.18e-84 263
MS.gene42351.t1 MTR_1g094115 66.463 164 37 2 20 183 45 190 2.22e-79 254
MS.gene42351.t1 MTR_2g017720 68.333 120 32 2 27 146 318 431 6.72e-50 174
MS.gene42351.t1 MTR_3g102000 61.000 100 31 3 49 144 36 131 1.08e-34 129
MS.gene42351.t1 MTR_5g030560 77.778 45 10 0 32 76 16 60 8.06e-20 84.0
MS.gene42351.t1 MTR_1g093095 30.769 143 86 4 43 174 107 247 6.21e-17 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42351.t1 AT3G50700 47.445 411 200 7 11 415 27 427 1.03e-111 335
MS.gene42351.t1 AT3G13810 75.152 165 41 0 22 186 51 215 8.68e-98 301
MS.gene42351.t1 AT3G13810 75.152 165 41 0 22 186 65 229 1.41e-97 301
MS.gene42351.t1 AT3G13810 75.152 165 41 0 22 186 70 234 1.67e-97 301
MS.gene42351.t1 AT3G13810 75.152 165 41 0 22 186 70 234 1.67e-97 301
MS.gene42351.t1 AT1G03840 74.556 169 42 1 15 183 34 201 2.21e-97 300
MS.gene42351.t1 AT1G55110 76.543 162 38 0 22 183 63 224 9.41e-97 297
MS.gene42351.t1 AT1G55110 76.543 162 38 0 22 183 63 224 9.41e-97 297
MS.gene42351.t1 AT1G55110 76.543 162 38 0 22 183 63 224 9.41e-97 297
MS.gene42351.t1 AT1G14580 70.520 173 50 1 13 185 44 215 1.38e-96 297
MS.gene42351.t1 AT1G14580 70.520 173 50 1 13 185 44 215 1.38e-96 297
MS.gene42351.t1 AT1G14580 70.520 173 50 1 13 185 58 229 2.86e-96 297
MS.gene42351.t1 AT4G02670 77.160 162 37 0 22 183 53 214 7.78e-96 293
MS.gene42351.t1 AT4G02670 77.160 162 37 0 22 183 55 216 9.52e-96 293
MS.gene42351.t1 AT5G03150 64.532 203 64 1 21 223 52 246 1.74e-95 296
MS.gene42351.t1 AT2G02080 69.942 173 50 2 13 185 46 216 6.31e-95 295
MS.gene42351.t1 AT2G02080 69.942 173 50 2 13 185 46 216 6.31e-95 295
MS.gene42351.t1 AT2G02080 69.942 173 50 2 13 185 46 216 6.31e-95 295
MS.gene42351.t1 AT2G02080 69.942 173 50 2 13 185 46 216 6.31e-95 295
MS.gene42351.t1 AT1G03840 73.373 169 42 2 15 183 34 199 4.23e-94 292
MS.gene42351.t1 AT5G44160 72.619 168 45 1 18 185 33 199 1.43e-93 290
MS.gene42351.t1 AT3G45260 73.620 163 43 0 21 183 38 200 3.04e-93 288
MS.gene42351.t1 AT3G45260 73.620 163 43 0 21 183 38 200 3.04e-93 288
MS.gene42351.t1 AT5G60470 58.723 235 83 4 2 234 24 246 5.28e-93 288
MS.gene42351.t1 AT5G60470 58.723 235 83 4 2 234 28 250 5.50e-93 288
MS.gene42351.t1 AT3G13810 75.325 154 38 0 33 186 68 221 3.40e-91 285
MS.gene42351.t1 AT3G13810 75.325 154 38 0 33 186 82 235 4.98e-91 285
MS.gene42351.t1 AT2G02070 72.121 165 45 1 22 186 52 215 1.31e-90 286
MS.gene42351.t1 AT2G02070 72.121 165 45 1 22 186 52 215 1.31e-90 286
MS.gene42351.t1 AT5G60470 55.274 237 90 4 6 234 13 241 1.89e-86 271
MS.gene42351.t1 AT5G44160 61.257 191 68 3 32 221 8 193 1.47e-85 268
MS.gene42351.t1 AT2G02080 69.286 140 42 1 46 185 1 139 7.52e-78 248
MS.gene42351.t1 AT2G02080 69.286 140 42 1 46 185 1 139 7.52e-78 248
MS.gene42351.t1 AT2G01940 53.500 200 90 2 15 213 37 234 1.45e-71 232
MS.gene42351.t1 AT1G68130 60.248 161 63 1 17 176 36 196 6.37e-71 229
MS.gene42351.t1 AT1G25250 61.146 157 59 2 22 176 33 189 1.79e-69 224
MS.gene42351.t1 AT2G01940 52.239 201 92 3 15 213 37 235 2.47e-67 221
MS.gene42351.t1 AT1G25250 61.074 149 56 2 30 176 18 166 2.65e-66 216
MS.gene42351.t1 AT5G66730 39.871 464 187 20 22 412 32 476 1.12e-64 215
MS.gene42351.t1 AT1G68130 60.000 110 43 1 68 176 1 110 2.22e-44 157
MS.gene42351.t1 AT2G01940 50.340 147 70 2 68 213 1 145 4.44e-44 157
MS.gene42351.t1 AT1G25250 58.559 111 44 2 68 176 1 111 2.92e-42 151
MS.gene42351.t1 AT5G22890 33.708 178 103 4 16 180 184 359 6.29e-24 102
MS.gene42351.t1 AT1G34370 35.256 156 88 3 30 172 13 168 2.84e-23 99.4
MS.gene42351.t1 AT1G34370 34.568 162 93 3 30 178 223 384 4.41e-23 101
MS.gene42351.t1 AT1G34370 34.568 162 93 3 30 178 223 384 4.41e-23 101
MS.gene42351.t1 AT1G13290 32.768 177 101 7 19 178 62 237 5.82e-18 84.3
MS.gene42351.t1 AT1G51220 33.333 147 87 5 43 180 170 314 1.42e-17 84.0
MS.gene42351.t1 AT3G20880 34.014 147 86 5 43 180 248 392 1.88e-17 84.3
MS.gene42351.t1 AT3G57670 33.333 138 82 4 43 172 209 344 9.43e-17 82.0
MS.gene42351.t1 AT1G08290 33.721 172 92 7 22 174 142 310 1.24e-16 80.9
MS.gene42351.t1 AT1G34790 33.793 145 88 3 35 172 129 272 1.29e-15 77.4

Find 99 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGCTTTGCTCACATCTTT+TGG 0.214858 3.2:-89201525 MS.gene42351:CDS
GTGATCATTGTTGTTGTTAT+TGG 0.219266 3.2:+89201875 None:intergenic
GCATCCTTGCTTCGTGCTTT+AGG 0.267894 3.2:-89201756 MS.gene42351:CDS
GTTGGTTGCTAGTAAAGTTT+TGG 0.275277 3.2:+89205502 None:intergenic
TTATATACACCTGGCATTCC+AGG 0.339087 3.2:+89205720 None:intergenic
CCCATGACCCGTGATCTTCT+CGG 0.362988 3.2:-89201585 MS.gene42351:CDS
GTGGCAGATTATCTTGGGCT+TGG 0.371694 3.2:-89201648 MS.gene42351:CDS
TCTCGGTCTTAGCATGGGAT+TGG 0.395080 3.2:-89201568 MS.gene42351:CDS
GAGCCTGTGGCAGATTATCT+TGG 0.397193 3.2:-89201654 MS.gene42351:CDS
CTTCCCTGTGGGAATGAGAC+GGG 0.408229 3.2:-89201624 MS.gene42351:CDS
GAAAGCACGGTGAGAAGAAA+TGG 0.413209 3.2:-89205265 MS.gene42351:CDS
ATCACTGATGATATTGTTGA+TGG 0.423893 3.2:+89204903 None:intergenic
TTCTAAACTCTTGTCTATGC+AGG 0.423930 3.2:+89201486 None:intergenic
CTCGGTCTTAGCATGGGATT+GGG 0.446112 3.2:-89201567 MS.gene42351:CDS
ATGGCGGTGACAGCCTTGTT+GGG 0.448019 3.2:+89202042 None:intergenic
TTTCGTCGTTCGCTCGCTGC+CGG 0.456453 3.2:+89205390 None:intergenic
AAAGCGATTACTTCAGCGTC+TGG 0.457409 3.2:+89205530 None:intergenic
AGCCTGTGGCAGATTATCTT+GGG 0.461391 3.2:-89201653 MS.gene42351:CDS
ACCGAGAAGATCACGGGTCA+TGG 0.464536 3.2:+89201584 None:intergenic
CGAAATCTCCCTGGAATGCC+AGG 0.466668 3.2:-89205729 MS.gene42351:intron
GATGGCGGTGACAGCCTTGT+TGG 0.468203 3.2:+89202041 None:intergenic
ACAACATGCCGTGGAAGCTC+CGG 0.473951 3.2:-89205409 MS.gene42351:CDS
GGAGTGAGTGGTGGCGTAGC+CGG 0.477319 3.2:+89204924 None:intergenic
TGTGAAAAGTGAGAGGGTTG+TGG 0.480243 3.2:+89201911 None:intergenic
AGCACGAAGCAAGGATGCAT+TGG 0.486996 3.2:+89201761 None:intergenic
GAAGTAGAAGCGTTTGAAGA+TGG 0.494397 3.2:+89202023 None:intergenic
TGATCTTCTCGGTCTTAGCA+TGG 0.494778 3.2:-89201574 MS.gene42351:CDS
GTGAAAAGTGAGAGGGTTGT+GGG 0.501902 3.2:+89201912 None:intergenic
TTCCCTGTGGGAATGAGACG+GGG 0.506510 3.2:-89201623 MS.gene42351:CDS
TGGTGAACGCAGGAAGGCTC+AGG 0.513816 3.2:+89205341 None:intergenic
TACAGATCTCGCATATGAAA+CGG 0.517803 3.2:+89205480 None:intergenic
GATCTTCTCGGTCTTAGCAT+GGG 0.522076 3.2:-89201573 MS.gene42351:CDS
GTTATTCCATTGATCTGTTG+TGG 0.526630 3.2:+89201701 None:intergenic
GAAGATCACGGGTCATGGGC+TGG 0.528136 3.2:+89201589 None:intergenic
TTGTTATTGGAGAGATAGAG+TGG 0.529493 3.2:+89201888 None:intergenic
CTGTAACAAAGGATTCCAAC+GGG 0.530824 3.2:-89205462 MS.gene42351:CDS
ATATGCGAGATCTGTAACAA+AGG 0.533818 3.2:-89205473 MS.gene42351:CDS
CAGAAGGTTCTGCGATGGAA+TGG 0.534515 3.2:-89205018 MS.gene42351:CDS
TGTGTCCTCGCCGGTGAAGT+TGG 0.538471 3.2:+89205429 None:intergenic
GCTCGCTGCCGGAGCTTCCA+CGG 0.538801 3.2:+89205401 None:intergenic
TATATACACCTGGCATTCCA+GGG 0.541617 3.2:+89205721 None:intergenic
CCGAGAAGATCACGGGTCAT+GGG 0.542667 3.2:+89201585 None:intergenic
AATGCAGTAGCAGATAATAC+AGG 0.542965 3.2:+89201819 None:intergenic
TTGGGCTTGGACTTCCCTGT+GGG 0.543392 3.2:-89201635 MS.gene42351:CDS
ACTTCCCTGTGGGAATGAGA+CGG 0.547067 3.2:-89201625 MS.gene42351:CDS
TTGTCGTCTACTCAGTGCTC+AGG 0.547564 3.2:-89204867 MS.gene42351:intron
GCAGCACCACAACAGATCAA+TGG 0.551093 3.2:-89201707 MS.gene42351:CDS
GTAGCAGATAATACAGGTTG+TGG 0.552729 3.2:+89201825 None:intergenic
GTTGGAGATTCTGTTCCCGT+TGG 0.557245 3.2:+89205447 None:intergenic
AGGTCACCGAGTGCTCTTGA+AGG 0.557256 3.2:+89205314 None:intergenic
GTGAATGAGAGTTGGAAGGA+GGG 0.557913 3.2:-89204996 MS.gene42351:CDS
CTTGGGCTTGGACTTCCCTG+TGG 0.559790 3.2:-89201636 MS.gene42351:CDS
CACAATCCTTCAAGAGCACT+CGG 0.561083 3.2:-89205320 MS.gene42351:CDS
AGAGTGGTGTGAAAAGTGAG+AGG 0.562539 3.2:+89201904 None:intergenic
AACAGAATCTCCAACTTCAC+CGG 0.564489 3.2:-89205439 MS.gene42351:CDS
ACGGCATGTTGTGTCCTCGC+CGG 0.565267 3.2:+89205420 None:intergenic
TCCCTGTGGGAATGAGACGG+GGG 0.566052 3.2:-89201622 MS.gene42351:CDS
AGAGAGTATAAATGTGATTG+TGG 0.571517 3.2:-89205170 MS.gene42351:CDS
ATGGAATGGTGAATGAGAGT+TGG 0.571967 3.2:-89205004 MS.gene42351:CDS
ATCAACAATATCATCAGTGA+TGG 0.575729 3.2:-89204901 MS.gene42351:CDS
AGAGCACTCGGTGACCTCAC+AGG 0.584571 3.2:-89205308 MS.gene42351:CDS
AATGAGAGTTGGAAGGAGGG+TGG 0.585791 3.2:-89204993 MS.gene42351:CDS
AGCCCAAGATAATCTGCCAC+AGG 0.587033 3.2:+89201651 None:intergenic
GCCGGTGAAGAAGAAGAAGA+AGG 0.591860 3.2:+89204942 None:intergenic
GCTAAGACCGAGAAGATCAC+GGG 0.592165 3.2:+89201578 None:intergenic
TCTGTGATAGAGAAAGATGT+GGG 0.592327 3.2:+89201936 None:intergenic
GGCGAGGACACAACATGCCG+TGG 0.596259 3.2:-89205418 MS.gene42351:CDS
CAAGCCTAAAGCACGAAGCA+AGG 0.596303 3.2:+89201752 None:intergenic
TGCTAAGACCGAGAAGATCA+CGG 0.597202 3.2:+89201577 None:intergenic
TGAAGGATTGTGGTGAACGC+AGG 0.600303 3.2:+89205331 None:intergenic
GGTGAATGAGAGTTGGAAGG+AGG 0.600831 3.2:-89204997 MS.gene42351:CDS
AAAGTTCATATGAAGAACTG+TGG 0.604717 3.2:-89205197 MS.gene42351:CDS
GGTGGCGGTGTAGTAGAAAG+TGG 0.610378 3.2:+89205765 None:intergenic
GATATTGTTGATGGAGTGAG+TGG 0.614576 3.2:+89204912 None:intergenic
GACAAACGTACACTTTCTTG+CGG 0.615008 3.2:+89205363 None:intergenic
TAGCAATAACGCTGTTGCCG+TGG 0.616354 3.2:-89204967 MS.gene42351:CDS
ATTGTTGATGGAGTGAGTGG+TGG 0.622386 3.2:+89204915 None:intergenic
GTAGTAGAAAGTGGCATTGG+TGG 0.622904 3.2:+89205774 None:intergenic
CCCTGTGGGAATGAGACGGG+GGG 0.624937 3.2:-89201621 MS.gene42351:CDS
AAACGTACACTTTCTTGCGG+AGG 0.628231 3.2:+89205366 None:intergenic
TCTGTAACAAAGGATTCCAA+CGG 0.628991 3.2:-89205463 MS.gene42351:CDS
GGATTGTGGTGAACGCAGGA+AGG 0.629061 3.2:+89205335 None:intergenic
CACTGAGTAGACGACAAAGT+AGG 0.633598 3.2:+89204873 None:intergenic
GATCTCGCATATGAAACGGT+TGG 0.639364 3.2:+89205484 None:intergenic
ACGCACAGAAGGTTCTGCGA+TGG 0.641919 3.2:-89205023 MS.gene42351:CDS
GGTGTAGTAGAAAGTGGCAT+TGG 0.645281 3.2:+89205771 None:intergenic
TAGCATGGGATTGGGTAGAG+AGG 0.647406 3.2:-89201559 MS.gene42351:CDS
AGAAGAAGAAGAAGGAACCA+CGG 0.661668 3.2:+89204950 None:intergenic
GAGTGGTGTGAAAAGTGAGA+GGG 0.666933 3.2:+89201905 None:intergenic
ACATTGCAGAAAACCCAACA+AGG 0.670424 3.2:-89202055 MS.gene42351:CDS
GTAGAAGCGTTTGAAGATGG+CGG 0.678836 3.2:+89202026 None:intergenic
AATGGTGAATGAGAGTTGGA+AGG 0.679457 3.2:-89205000 MS.gene42351:CDS
CGAGTGCTCTTGAAGGATTG+TGG 0.681807 3.2:+89205321 None:intergenic
ACAGATCAATGGAATAACCA+TGG 0.682178 3.2:-89201696 MS.gene42351:CDS
TTCTGTGATAGAGAAAGATG+TGG 0.682251 3.2:+89201935 None:intergenic
CTGTGATAGAGAAAGATGTG+GGG 0.685180 3.2:+89201937 None:intergenic
AATCTCCAACTTCACCGGCG+AGG 0.689245 3.2:-89205434 MS.gene42351:CDS
AAAACAAGAGAATGAGCCTG+TGG 0.695424 3.2:-89201667 MS.gene42351:CDS
GATGTGGGGATATCTGAGTG+AGG 0.723861 3.2:+89201951 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAATTCCTTATTATT+TGG - chr3.2:89203027-89203046 MS.gene42351:intron 10.0%
!! ATGATTTATTTATATAATAG+TGG + chr3.2:89201615-89201634 None:intergenic 10.0%
!!! AAAAAAATTGTTATTTTGAT+AGG - chr3.2:89202687-89202706 MS.gene42351:intron 10.0%
!!! AAAATATGATTTTATTTTGT+AGG - chr3.2:89202933-89202952 MS.gene42351:intron 10.0%
!!! ATTAAATTTATTGTTTTTTG+TGG + chr3.2:89202595-89202614 None:intergenic 10.0%
!!! TTATTTGTTTATTTGTTAAT+AGG - chr3.2:89202240-89202259 MS.gene42351:intron 10.0%
!! AGATAAAATAATATGACAAA+TGG + chr3.2:89202733-89202752 None:intergenic 15.0%
!! ATAAAATAAATAGTATTTGG+TGG - chr3.2:89203298-89203317 MS.gene42351:intron 15.0%
!! CAGATAAAATAAATAGTATT+TGG - chr3.2:89203295-89203314 MS.gene42351:intron 15.0%
!! CATACTTTAATGTTATTATA+AGG - chr3.2:89204729-89204748 MS.gene42351:intron 15.0%
!! TGTAAAACTTATATCAAAAT+AGG - chr3.2:89204066-89204085 MS.gene42351:intron 15.0%
!!! ACTTTTTACAAAATAAACAT+AGG - chr3.2:89204008-89204027 MS.gene42351:intron 15.0%
!!! ATAATTTTGAGACAAATTTT+TGG + chr3.2:89203587-89203606 None:intergenic 15.0%
!!! ATGTTTATTTTGTAAAAAGT+TGG + chr3.2:89204008-89204027 None:intergenic 15.0%
!!! CAAATATCATTTTTATTTAC+AGG - chr3.2:89203611-89203630 MS.gene42351:intron 15.0%
!!! CTTAAAGAAATTTTTTACTA+TGG + chr3.2:89203439-89203458 None:intergenic 15.0%
!!! TTTGTCATATTATTTTATCT+AGG - chr3.2:89202733-89202752 MS.gene42351:intron 15.0%
!!! TTTTTTAAATTTTCTCAATC+AGG - chr3.2:89205120-89205139 MS.gene42351:intron 15.0%
!! AAAGAATTGTGTGTAATTTA+GGG - chr3.2:89203780-89203799 MS.gene42351:intron 20.0%
!! AAATGAGAATAATATGATGA+GGG + chr3.2:89203677-89203696 None:intergenic 20.0%
!! AATCTTGAAAAAACAACTAA+TGG + chr3.2:89205203-89205222 None:intergenic 20.0%
!! ACAAAACTGTGAATATTTAT+AGG - chr3.2:89202963-89202982 MS.gene42351:intron 20.0%
!! ACAAAACTGTGAATATTTAT+AGG + chr3.2:89202982-89202963 None:intergenic 20.0%
!! AGAGAGATAAATAGATAAAA+GGG + chr3.2:89203007-89203026 None:intergenic 20.0%
!! AGTAATATTCATTATTCTTG+CGG - chr3.2:89204271-89204290 MS.gene42351:intron 20.0%
!! ATAAGCATGAAACAAATTAT+TGG - chr3.2:89204106-89204125 MS.gene42351:intron 20.0%
!! CAAAACTGTGAATATTTATA+GGG - chr3.2:89202964-89202983 MS.gene42351:intron 20.0%
!! CAAAACTGTGAATATTTATA+GGG + chr3.2:89202983-89202964 None:intergenic 20.0%
!! CTTCATTTATCCAAATAATA+AGG + chr3.2:89203040-89203059 None:intergenic 20.0%
!! GATATTTATTTATATACACC+TGG + chr3.2:89201593-89201612 None:intergenic 20.0%
!! TAAATGAGAATAATATGATG+AGG + chr3.2:89203678-89203697 None:intergenic 20.0%
!! TAAGCATGAAACAAATTATT+GGG - chr3.2:89204107-89204126 MS.gene42351:intron 20.0%
!! TAGAGAGATAAATAGATAAA+AGG + chr3.2:89203008-89203027 None:intergenic 20.0%
!! TAGTAATTCATTTCCTATTT+GGG - chr3.2:89202467-89202486 MS.gene42351:intron 20.0%
!! TCAAAGATCTTTATTAATCA+TGG - chr3.2:89204641-89204660 MS.gene42351:intron 20.0%
!! TGCTGATGAAAAAATTTATA+AGG + chr3.2:89202838-89202857 None:intergenic 20.0%
!!! AAAACTTTTCTAGATTATCA+TGG + chr3.2:89204617-89204636 None:intergenic 20.0%
!!! AAAATTTCCATCAAGATTTT+TGG - chr3.2:89202873-89202892 MS.gene42351:intron 20.0%
!!! ATTTTTTTTCATCTTCCTTT+AGG - chr3.2:89203541-89203560 MS.gene42351:intron 20.0%
!!! GGTTAATGCTTATTAATTTT+TGG - chr3.2:89204571-89204590 MS.gene42351:intron 20.0%
!!! TCATTTGTTCTTTTTAATTG+TGG - chr3.2:89202632-89202651 MS.gene42351:intron 20.0%
!!! TCTTTTTAATTGTGGTATTA+AGG - chr3.2:89202640-89202659 MS.gene42351:intron 20.0%
!!! TTGTTTATTTGTTAATAGGA+AGG - chr3.2:89202244-89202263 MS.gene42351:intron 20.0%
!!! TTGTTTTTTGTGGAAAATTA+AGG + chr3.2:89202585-89202604 None:intergenic 20.0%
!!! TTTTGAGAGATAATTAAAGA+TGG + chr3.2:89202185-89202204 None:intergenic 20.0%
! AACAAATTATTGGGAAGTAA+AGG - chr3.2:89204116-89204135 MS.gene42351:intron 25.0%
! AAGAATTGTGTGTAATTTAG+GGG - chr3.2:89203781-89203800 MS.gene42351:intron 25.0%
! ACTAGTTAAGGAAACAAAAA+AGG + chr3.2:89204877-89204896 None:intergenic 25.0%
! ATATTCTTGAGCTATGTAAT+TGG - chr3.2:89204233-89204252 MS.gene42351:intron 25.0%
! CTAGTAATTCATTTCCTATT+TGG - chr3.2:89202466-89202485 MS.gene42351:intron 25.0%
! GAAAGAATTGTGTGTAATTT+AGG - chr3.2:89203779-89203798 MS.gene42351:intron 25.0%
! TATTCTTGAGCTATGTAATT+GGG - chr3.2:89204234-89204253 MS.gene42351:intron 25.0%
!!! ATTTCATTTTTGTGTTGTCT+CGG + chr3.2:89203649-89203668 None:intergenic 25.0%
!!! CAATTGTCACTTTATAACAA+GGG + chr3.2:89204923-89204942 None:intergenic 25.0%
!!! CATTTTTATTTACAGGTTGA+GGG - chr3.2:89203618-89203637 MS.gene42351:intron 25.0%
!!! TCAATTGTCACTTTATAACA+AGG + chr3.2:89204924-89204943 None:intergenic 25.0%
!!! TCATTTTTATTTACAGGTTG+AGG - chr3.2:89203617-89203636 MS.gene42351:intron 25.0%
AAAAGGGGAAAATAATAGGA+AGG - chr3.2:89204975-89204994 MS.gene42351:CDS 30.0%
AAAGGAAACAAATTCATCAC+TGG - chr3.2:89204134-89204153 MS.gene42351:intron 30.0%
AAAGTTCATATGAAGAACTG+TGG - chr3.2:89202104-89202123 MS.gene42351:intron 30.0%
ACAATTGATCCTAAATGAAC+AGG - chr3.2:89204936-89204955 MS.gene42351:CDS 30.0%
ACTATCAATTTGCAATTGCA+AGG - chr3.2:89202549-89202568 MS.gene42351:intron 30.0%
AGGGAACCAAATATAGTATA+AGG - chr3.2:89204786-89204805 MS.gene42351:intron 30.0%
AGTCAAAAGGGGAAAATAAT+AGG - chr3.2:89204971-89204990 MS.gene42351:CDS 30.0%
ATAAGGACTAAAAATGCTGA+CGG + chr3.2:89202821-89202840 None:intergenic 30.0%
ATCAACAATATCATCAGTGA+TGG - chr3.2:89202400-89202419 MS.gene42351:intron 30.0%
ATCACTGATGATATTGTTGA+TGG + chr3.2:89202401-89202420 None:intergenic 30.0%
ATGAATTGAAAGAGATGGAA+AGG - chr3.2:89204159-89204178 MS.gene42351:intron 30.0%
ATTGAATGCATAGAGCAAAA+CGG + chr3.2:89205021-89205040 None:intergenic 30.0%
CAAGGTCCTTATACTATATT+TGG + chr3.2:89204795-89204814 None:intergenic 30.0%
CAATTGATCCTAAATGAACA+GGG - chr3.2:89204937-89204956 MS.gene42351:CDS 30.0%
CACTTGTAAATTTACTTGTG+TGG - chr3.2:89204550-89204569 MS.gene42351:intron 30.0%
CTATCAATTTGCAATTGCAA+GGG - chr3.2:89202550-89202569 MS.gene42351:intron 30.0%
TATTCATTATTCTTGCGGTT+TGG - chr3.2:89204276-89204295 MS.gene42351:intron 30.0%
TCTCGCATATTATAACCTAA+AGG + chr3.2:89203559-89203578 None:intergenic 30.0%
TGACCATATAAGAATGTGTT+CGG + chr3.2:89203275-89203294 None:intergenic 30.0%
TGCTTAAGGAAAATGTCAAA+GGG - chr3.2:89202905-89202924 MS.gene42351:intron 30.0%
TGGAAATGAATTGAAAGAGA+TGG - chr3.2:89204154-89204173 MS.gene42351:intron 30.0%
TTAAGGACCAAAAATCTTGA+TGG + chr3.2:89202883-89202902 None:intergenic 30.0%
TTGCAATTGCAAATTGATAG+TGG + chr3.2:89202550-89202569 None:intergenic 30.0%
TTGCTGAGTAAATTACACTA+GGG + chr3.2:89204469-89204488 None:intergenic 30.0%
! AATGTTTTCCAAAACAAAGG+CGG + chr3.2:89202524-89202543 None:intergenic 30.0%
! ACGAATGTTTTCCAAAACAA+AGG + chr3.2:89202527-89202546 None:intergenic 30.0%
! AGAGAGTATAAATGTGATTG+TGG - chr3.2:89202131-89202150 MS.gene42351:intron 30.0%
! ATAATTTTGTTACGCACAGA+AGG - chr3.2:89202267-89202286 MS.gene42351:intron 30.0%
! ATGCTGACGGAAAATTTTAT+AGG + chr3.2:89202808-89202827 None:intergenic 30.0%
! CATTTTCCTTAAGCACTTTA+AGG + chr3.2:89202900-89202919 None:intergenic 30.0%
! CTTGATGGAAATTTTTGACA+GGG + chr3.2:89202868-89202887 None:intergenic 30.0%
! GTGATCATTGTTGTTGTTAT+TGG + chr3.2:89205429-89205448 None:intergenic 30.0%
! TCTTGATGGAAATTTTTGAC+AGG + chr3.2:89202869-89202888 None:intergenic 30.0%
! TGCTGACGGAAAATTTTATA+GGG + chr3.2:89202807-89202826 None:intergenic 30.0%
! TTGATGGAAATTTTTGACAG+GGG + chr3.2:89202867-89202886 None:intergenic 30.0%
! TTGGTTGCTAGTAAAGTTTT+GGG + chr3.2:89201801-89201820 None:intergenic 30.0%
!!! AGATTTCGCTTCTTTTTTGA+CGG + chr3.2:89201560-89201579 None:intergenic 30.0%
AAGCCGAACACATTCTTATA+TGG - chr3.2:89203269-89203288 MS.gene42351:intron 35.0%
ACAGATCAATGGAATAACCA+TGG - chr3.2:89205605-89205624 MS.gene42351:intron 35.0%
ATATGCGAGATCTGTAACAA+AGG - chr3.2:89201828-89201847 MS.gene42351:CDS 35.0%
CTTTGACTACACAAGTTTCA+AGG + chr3.2:89204813-89204832 None:intergenic 35.0%
GATTATCATGGAAGAATTGC+AGG + chr3.2:89204605-89204624 None:intergenic 35.0%
GTGCTTAAGGAAAATGTCAA+AGG - chr3.2:89202904-89202923 MS.gene42351:intron 35.0%
GTTATTCCATTGATCTGTTG+TGG + chr3.2:89205603-89205622 None:intergenic 35.0%
GTTGCTGAGTAAATTACACT+AGG + chr3.2:89204470-89204489 None:intergenic 35.0%
TACAGATCTCGCATATGAAA+CGG + chr3.2:89201824-89201843 None:intergenic 35.0%
TCTGTAACAAAGGATTCCAA+CGG - chr3.2:89201838-89201857 MS.gene42351:CDS 35.0%
TCTGTGATAGAGAAAGATGT+GGG + chr3.2:89205368-89205387 None:intergenic 35.0%
TGCTGAGTAAATTACACTAG+GGG + chr3.2:89204468-89204487 None:intergenic 35.0%
TTCTGTGATAGAGAAAGATG+TGG + chr3.2:89205369-89205388 None:intergenic 35.0%
TTGAATGCATAGAGCAAAAC+GGG + chr3.2:89205020-89205039 None:intergenic 35.0%
! AAGCACTTTTGTAGAAAGCA+CGG - chr3.2:89202023-89202042 MS.gene42351:CDS 35.0%
! AGATAAAAAAGCATGCGGTT+TGG - chr3.2:89203857-89203876 MS.gene42351:intron 35.0%
! ATGTTTTCCAAAACAAAGGC+GGG + chr3.2:89202523-89202542 None:intergenic 35.0%
! CAAAAGTGCAAAACCCAAAT+AGG + chr3.2:89202483-89202502 None:intergenic 35.0%
! GTTGGTTGCTAGTAAAGTTT+TGG + chr3.2:89201802-89201821 None:intergenic 35.0%
! TTGTTATTGGAGAGATAGAG+TGG + chr3.2:89205416-89205435 None:intergenic 35.0%
! TTTGGTCCTTAAAGTGCTTA+AGG - chr3.2:89202891-89202910 MS.gene42351:intron 35.0%
! TTTTTCCATTGTTGCACATC+AGG + chr3.2:89204198-89204217 None:intergenic 35.0%
!! ATTATTCTTGCGGTTTGGTT+TGG - chr3.2:89204281-89204300 MS.gene42351:intron 35.0%
!! CAGTTTTGTAATGGGGAAAA+GGG + chr3.2:89205451-89205470 None:intergenic 35.0%
!! TGGAGATGCAGTTTTGTAAT+GGG + chr3.2:89205459-89205478 None:intergenic 35.0%
!! TGGTTTGCGGTTTTTCTATT+GGG - chr3.2:89204424-89204443 MS.gene42351:intron 35.0%
!!! GAAGTATTTTTCTGAGGTTC+TGG + chr3.2:89201506-89201525 None:intergenic 35.0%
!!! GTTTTTCTATTGGGTTGGTT+CGG - chr3.2:89204433-89204452 MS.gene42351:intron 35.0%
!!! TCTCTTGTTTTACATGACCA+TGG + chr3.2:89205625-89205644 None:intergenic 35.0%
!!! TTGGTTTGCGGTTTTTCTAT+TGG - chr3.2:89204423-89204442 MS.gene42351:intron 35.0%
AAAAAGAAGCGAAATCTCCC+TGG - chr3.2:89201563-89201582 MS.gene42351:CDS 40.0%
AAAACAAGAGAATGAGCCTG+TGG - chr3.2:89205634-89205653 MS.gene42351:intron 40.0%
AAAATGTTAACGAGTGCCTC+CGG - chr3.2:89204752-89204771 MS.gene42351:intron 40.0%
AACAGAATCTCCAACTTCAC+CGG - chr3.2:89201862-89201881 MS.gene42351:CDS 40.0%
AAGGCAGTGTAAGTCAAAAG+GGG - chr3.2:89204960-89204979 MS.gene42351:CDS 40.0%
AATGGTGAATGAGAGTTGGA+AGG - chr3.2:89202301-89202320 MS.gene42351:intron 40.0%
ACATTGCAGAAAACCCAACA+AGG - chr3.2:89205246-89205265 MS.gene42351:CDS 40.0%
ACCTGAAACAGTGAAACACA+AGG + chr3.2:89205075-89205094 None:intergenic 40.0%
AGAAGAAGAAGAAGGAACCA+CGG + chr3.2:89202354-89202373 None:intergenic 40.0%
ATGGAATGGTGAATGAGAGT+TGG - chr3.2:89202297-89202316 MS.gene42351:intron 40.0%
CAAACCAAACCAAACCAATG+CGG - chr3.2:89203915-89203934 MS.gene42351:intron 40.0%
CCTGAAACAGTGAAACACAA+GGG + chr3.2:89205074-89205093 None:intergenic 40.0%
CTGAAACAGTGAAACACAAG+GGG + chr3.2:89205073-89205092 None:intergenic 40.0%
CTGTAACAAAGGATTCCAAC+GGG - chr3.2:89201839-89201858 MS.gene42351:CDS 40.0%
CTGTGATAGAGAAAGATGTG+GGG + chr3.2:89205367-89205386 None:intergenic 40.0%
GAAGGCAGTGTAAGTCAAAA+GGG - chr3.2:89204959-89204978 MS.gene42351:CDS 40.0%
GACAAACGTACACTTTCTTG+CGG + chr3.2:89201941-89201960 None:intergenic 40.0%
GTAGCAGATAATACAGGTTG+TGG + chr3.2:89205479-89205498 None:intergenic 40.0%
TAGTAATGCAGCCCACATTA+TGG - chr3.2:89203143-89203162 MS.gene42351:intron 40.0%
TATATACACCTGGCATTCCA+GGG + chr3.2:89201583-89201602 None:intergenic 40.0%
TCCTTCTTCTTCTTCTTCAC+CGG - chr3.2:89202358-89202377 MS.gene42351:intron 40.0%
TGAAACAGTGAAACACAAGG+GGG + chr3.2:89205072-89205091 None:intergenic 40.0%
TGATCCTAAATGAACAGGGA+AGG - chr3.2:89204941-89204960 MS.gene42351:CDS 40.0%
TGTGAGAGGATCCATAATGT+GGG + chr3.2:89203157-89203176 None:intergenic 40.0%
TTATATACACCTGGCATTCC+AGG + chr3.2:89201584-89201603 None:intergenic 40.0%
TTGTTTCCTTAACTAGTGCC+CGG - chr3.2:89204880-89204899 MS.gene42351:CDS 40.0%
! ATTGTGGCACTGTGTTTTCT+AGG - chr3.2:89202147-89202166 MS.gene42351:intron 40.0%
! CTTTGCTCACATCTTTTGGA+GGG - chr3.2:89205780-89205799 MS.gene42351:CDS 40.0%
! GATATTGTTGATGGAGTGAG+TGG + chr3.2:89202392-89202411 None:intergenic 40.0%
! TCTGCTTTGCTCACATCTTT+TGG - chr3.2:89205776-89205795 MS.gene42351:CDS 40.0%
! TTGCGGTTTTTCTATTGGGT+TGG - chr3.2:89204428-89204447 MS.gene42351:intron 40.0%
!! AAAAAGCATGCGGTTTGGTT+TGG - chr3.2:89203862-89203881 MS.gene42351:intron 40.0%
!! GAAGTAGAAGCGTTTGAAGA+TGG + chr3.2:89205281-89205300 None:intergenic 40.0%
!! GCAGTTTTGTAATGGGGAAA+AGG + chr3.2:89205452-89205471 None:intergenic 40.0%
!! GGAGATGCAGTTTTGTAATG+GGG + chr3.2:89205458-89205477 None:intergenic 40.0%
!! GGTGGTGAAGTATTTTTCTG+AGG + chr3.2:89201512-89201531 None:intergenic 40.0%
!! GGTTTTGCACTTTTGTTTCC+TGG - chr3.2:89202488-89202507 MS.gene42351:intron 40.0%
!! GTGGAGATGCAGTTTTGTAA+TGG + chr3.2:89205460-89205479 None:intergenic 40.0%
!! GTTTGGATTGGTTTGGTTTG+CGG - chr3.2:89204411-89204430 MS.gene42351:intron 40.0%
!!! GGTTTTGGTTTGGATTGGTT+TGG - chr3.2:89204404-89204423 MS.gene42351:intron 40.0%
!!! GGTTTTTTGCGGTTTTGGTT+TGG - chr3.2:89204394-89204413 MS.gene42351:intron 40.0%
!!! TGCTTTTTTATCTCGCGGTT+TGG + chr3.2:89203850-89203869 None:intergenic 40.0%
!!! TTTCGCTTCTTTTTTGACGG+TGG + chr3.2:89201557-89201576 None:intergenic 40.0%
!!! TTTGCGGTTTTGGTTTGGAT+TGG - chr3.2:89204399-89204418 MS.gene42351:intron 40.0%
AAACCGCAAAAAACCGCACT+TGG + chr3.2:89204389-89204408 None:intergenic 45.0%
AAACGTACACTTTCTTGCGG+AGG + chr3.2:89201938-89201957 None:intergenic 45.0%
AAAGCGATTACTTCAGCGTC+TGG + chr3.2:89201774-89201793 None:intergenic 45.0%
AAATGTTAACGAGTGCCTCC+GGG - chr3.2:89204753-89204772 MS.gene42351:intron 45.0%
ACTCCAAAAAGCTGCTCAAG+TGG - chr3.2:89205505-89205524 MS.gene42351:CDS 45.0%
ACTGCCTTCCCTGTTCATTT+AGG + chr3.2:89204948-89204967 None:intergenic 45.0%
AGAGTGGTGTGAAAAGTGAG+AGG + chr3.2:89205400-89205419 None:intergenic 45.0%
AGCCTGTGGCAGATTATCTT+GGG - chr3.2:89205648-89205667 MS.gene42351:intron 45.0%
ATCCTCTCACACGATGACAA+TGG - chr3.2:89203166-89203185 MS.gene42351:intron 45.0%
CAAACCAAACCAATGCGGTT+TGG - chr3.2:89203920-89203939 MS.gene42351:intron 45.0%
CACTGAGTAGACGACAAAGT+AGG + chr3.2:89202431-89202450 None:intergenic 45.0%
CCCTTGTGTTTCACTGTTTC+AGG - chr3.2:89205071-89205090 MS.gene42351:intron 45.0%
CTCCAAAAAGCTGCTCAAGT+GGG - chr3.2:89205506-89205525 MS.gene42351:CDS 45.0%
GAACTTCGATTCACCTGCAT+AGG - chr3.2:89205802-89205821 MS.gene42351:CDS 45.0%
GAATTCATCCGAACCAAGTG+CGG - chr3.2:89204373-89204392 MS.gene42351:intron 45.0%
GAGTGGTGTGAAAAGTGAGA+GGG + chr3.2:89205399-89205418 None:intergenic 45.0%
GATCTCGCATATGAAACGGT+TGG + chr3.2:89201820-89201839 None:intergenic 45.0%
GATCTTCTCGGTCTTAGCAT+GGG - chr3.2:89205728-89205747 MS.gene42351:intron 45.0%
GCAAAAAACCGCACTTGGTT+CGG + chr3.2:89204384-89204403 None:intergenic 45.0%
GGAAGGCAGTGTAAGTCAAA+AGG - chr3.2:89204958-89204977 MS.gene42351:CDS 45.0%
GGTGTAGTAGAAAGTGGCAT+TGG + chr3.2:89201533-89201552 None:intergenic 45.0%
GTGAAAAGTGAGAGGGTTGT+GGG + chr3.2:89205392-89205411 None:intergenic 45.0%
GTGAATGAGAGTTGGAAGGA+GGG - chr3.2:89202305-89202324 MS.gene42351:intron 45.0%
GTGTGAGAGGATCCATAATG+TGG + chr3.2:89203158-89203177 None:intergenic 45.0%
TCCTCTCACACGATGACAAT+GGG - chr3.2:89203167-89203186 MS.gene42351:intron 45.0%
TCGAACCTGATGTGCAACAA+TGG - chr3.2:89204190-89204209 MS.gene42351:intron 45.0%
TGATCTTCTCGGTCTTAGCA+TGG - chr3.2:89205727-89205746 MS.gene42351:intron 45.0%
TGCTAAGACCGAGAAGATCA+CGG + chr3.2:89205727-89205746 None:intergenic 45.0%
TGTGAAAAGTGAGAGGGTTG+TGG + chr3.2:89205393-89205412 None:intergenic 45.0%
TGTTTCCTTAACTAGTGCCC+GGG - chr3.2:89204881-89204900 MS.gene42351:CDS 45.0%
! AACCCACTTGAGCAGCTTTT+TGG + chr3.2:89205511-89205530 None:intergenic 45.0%
! ATTGTTGATGGAGTGAGTGG+TGG + chr3.2:89202389-89202408 None:intergenic 45.0%
! CAAACCAATGCGGTTTGGAT+TGG - chr3.2:89203925-89203944 MS.gene42351:intron 45.0%
! CCGCGAGATAAAAAAGCATG+CGG - chr3.2:89203852-89203871 MS.gene42351:intron 45.0%
! GAAAGCACGGTGAGAAGAAA+TGG - chr3.2:89202036-89202055 MS.gene42351:CDS 45.0%
! GCTTTGCTCACATCTTTTGG+AGG - chr3.2:89205779-89205798 MS.gene42351:CDS 45.0%
! GTAGTAGAAAGTGGCATTGG+TGG + chr3.2:89201530-89201549 None:intergenic 45.0%
! GTCTTGTTAACTAATGCCCC+GGG + chr3.2:89204901-89204920 None:intergenic 45.0%
!! CAAACCGCATTGGTTTGGTT+TGG + chr3.2:89203922-89203941 None:intergenic 45.0%
!! CAATCCAAACCGCATTGGTT+TGG + chr3.2:89203927-89203946 None:intergenic 45.0%
!! CAATGCGGTTTGGATTGGTT+CGG - chr3.2:89203930-89203949 MS.gene42351:intron 45.0%
!! CACAATCCTTCAAGAGCACT+CGG - chr3.2:89201981-89202000 MS.gene42351:CDS 45.0%
!! CGCATTGGTTTGGTTTGGTT+TGG + chr3.2:89203917-89203936 None:intergenic 45.0%
!! CGGTTTGGTTTGGTTTGGTT+TGG - chr3.2:89204291-89204310 MS.gene42351:intron 45.0%
!! GCACTTGGTTCGGATGAATT+CGG + chr3.2:89204374-89204393 None:intergenic 45.0%
!! GGTCTTGTTAACTAATGCCC+CGG + chr3.2:89204902-89204921 None:intergenic 45.0%
!! GTAGAAGCGTTTGAAGATGG+CGG + chr3.2:89205278-89205297 None:intergenic 45.0%
!! GTGTAATTTAGGGGTGTTCG+CGG - chr3.2:89203790-89203809 MS.gene42351:intron 45.0%
!! TCTCAAACCCGCCTTTGTTT+TGG - chr3.2:89202513-89202532 MS.gene42351:intron 45.0%
!! TCTTGCGGTTTGGTTTGGTT+TGG - chr3.2:89204286-89204305 MS.gene42351:intron 45.0%
!! TTGGATTGGTTCGGTTTGTG+CGG - chr3.2:89203939-89203958 MS.gene42351:intron 45.0%
!!! AGTGCGGTTTTTTGCGGTTT+TGG - chr3.2:89204389-89204408 MS.gene42351:intron 45.0%
!!! AGTGCTTTTTCACTCCTGTG+AGG + chr3.2:89202010-89202029 None:intergenic 45.0%
!!! CCGCATGCTTTTTTATCTCG+CGG + chr3.2:89203855-89203874 None:intergenic 45.0%
!!! GAACCAAGTGCGGTTTTTTG+CGG - chr3.2:89204383-89204402 MS.gene42351:intron 45.0%
AATGAGAGTTGGAAGGAGGG+TGG - chr3.2:89202308-89202327 MS.gene42351:intron 50.0%
AATGTTAACGAGTGCCTCCG+GGG - chr3.2:89204754-89204773 MS.gene42351:intron 50.0%
ACACAAGGGGGAGAAAAGCT+TGG + chr3.2:89205060-89205079 None:intergenic 50.0%
ACTTCCCTGTGGGAATGAGA+CGG - chr3.2:89205676-89205695 MS.gene42351:intron 50.0%
AGCACGAAGCAAGGATGCAT+TGG + chr3.2:89205543-89205562 None:intergenic 50.0%
AGCCCAAGATAATCTGCCAC+AGG + chr3.2:89205653-89205672 None:intergenic 50.0%
CAAGCCTAAAGCACGAAGCA+AGG + chr3.2:89205552-89205571 None:intergenic 50.0%
CACAAGGGGGAGAAAAGCTT+GGG + chr3.2:89205059-89205078 None:intergenic 50.0%
CAGAAGGTTCTGCGATGGAA+TGG - chr3.2:89202283-89202302 MS.gene42351:intron 50.0%
CAGTGTGAGTCTTTGTGGGA+AGG - chr3.2:89203191-89203210 MS.gene42351:intron 50.0%
CGAACCAATCCAAACCGCAT+TGG + chr3.2:89203932-89203951 None:intergenic 50.0%
CGAGTGCTCTTGAAGGATTG+TGG + chr3.2:89201983-89202002 None:intergenic 50.0%
CTCGGTCTTAGCATGGGATT+GGG - chr3.2:89205734-89205753 MS.gene42351:CDS 50.0%
GAGCCTGTGGCAGATTATCT+TGG - chr3.2:89205647-89205666 MS.gene42351:intron 50.0%
GATGTGGGGATATCTGAGTG+AGG + chr3.2:89205353-89205372 None:intergenic 50.0%
GCAGCACCACAACAGATCAA+TGG - chr3.2:89205594-89205613 MS.gene42351:intron 50.0%
GCATCCTTGCTTCGTGCTTT+AGG - chr3.2:89205545-89205564 MS.gene42351:intron 50.0%
GCCGGTGAAGAAGAAGAAGA+AGG + chr3.2:89202362-89202381 None:intergenic 50.0%
GCTAAGACCGAGAAGATCAC+GGG + chr3.2:89205726-89205745 None:intergenic 50.0%
GGGACAGTGTGAGTCTTTGT+GGG - chr3.2:89203187-89203206 MS.gene42351:intron 50.0%
GGTGAATGAGAGTTGGAAGG+AGG - chr3.2:89202304-89202323 MS.gene42351:intron 50.0%
GTGGCAGATTATCTTGGGCT+TGG - chr3.2:89205653-89205672 MS.gene42351:intron 50.0%
GTTGGAGATTCTGTTCCCGT+TGG + chr3.2:89201857-89201876 None:intergenic 50.0%
GTTTCCTTAACTAGTGCCCG+GGG - chr3.2:89204882-89204901 MS.gene42351:CDS 50.0%
TAGCAATAACGCTGTTGCCG+TGG - chr3.2:89202334-89202353 MS.gene42351:intron 50.0%
TAGCATGGGATTGGGTAGAG+AGG - chr3.2:89205742-89205761 MS.gene42351:CDS 50.0%
TCCCATTGTCATCGTGTGAG+AGG + chr3.2:89203171-89203190 None:intergenic 50.0%
TCTCGGTCTTAGCATGGGAT+TGG - chr3.2:89205733-89205752 MS.gene42351:CDS 50.0%
TGAAGGATTGTGGTGAACGC+AGG + chr3.2:89201973-89201992 None:intergenic 50.0%
TGGGACAGTGTGAGTCTTTG+TGG - chr3.2:89203186-89203205 MS.gene42351:intron 50.0%
TGGGCTGCATTACTACTCAG+CGG + chr3.2:89203138-89203157 None:intergenic 50.0%
TTGTCGTCTACTCAGTGCTC+AGG - chr3.2:89202434-89202453 MS.gene42351:intron 50.0%
! AAAGGCGGGTTTGAGATACC+AGG + chr3.2:89202509-89202528 None:intergenic 50.0%
! GACTTTTGCACTGAACCGCA+CGG + chr3.2:89204349-89204368 None:intergenic 50.0%
!! GCATGCGGTTTGGTTTGGTT+CGG - chr3.2:89203867-89203886 MS.gene42351:intron 50.0%
!!! CGCTTCTTTTTTGACGGTGG+CGG + chr3.2:89201554-89201573 None:intergenic 50.0%
AATCTCCAACTTCACCGGCG+AGG - chr3.2:89201867-89201886 MS.gene42351:CDS 55.0%
AATGCCCCGGGCACTAGTTA+AGG + chr3.2:89204889-89204908 None:intergenic 55.0%
ACAACATGCCGTGGAAGCTC+CGG - chr3.2:89201892-89201911 MS.gene42351:CDS 55.0%
ACCGAGAAGATCACGGGTCA+TGG + chr3.2:89205720-89205739 None:intergenic 55.0%
ACGCACAGAAGGTTCTGCGA+TGG - chr3.2:89202278-89202297 MS.gene42351:intron 55.0%
AGGTCACCGAGTGCTCTTGA+AGG + chr3.2:89201990-89202009 None:intergenic 55.0%
CCCATGACCCGTGATCTTCT+CGG - chr3.2:89205716-89205735 MS.gene42351:intron 55.0%
CCGAGAAGATCACGGGTCAT+GGG + chr3.2:89205719-89205738 None:intergenic 55.0%
CGAAATCTCCCTGGAATGCC+AGG - chr3.2:89201572-89201591 MS.gene42351:CDS 55.0%
CTTCCCTGTGGGAATGAGAC+GGG - chr3.2:89205677-89205696 MS.gene42351:intron 55.0%
GCAAACCAAACCGAACCGTG+CGG - chr3.2:89204331-89204350 MS.gene42351:intron 55.0%
GGATTGTGGTGAACGCAGGA+AGG + chr3.2:89201969-89201988 None:intergenic 55.0%
GGGAGAAAAGCTTGGGAGTG+GGG + chr3.2:89205052-89205071 None:intergenic 55.0%
GGGGAGAAAAGCTTGGGAGT+GGG + chr3.2:89205053-89205072 None:intergenic 55.0%
TCAGCGTCTGGATCTGCGAA+CGG + chr3.2:89201762-89201781 None:intergenic 55.0%
TTCCCTGTGGGAATGAGACG+GGG - chr3.2:89205678-89205697 MS.gene42351:intron 55.0%
TTGCACTGAACCGCACGGTT+CGG + chr3.2:89204344-89204363 None:intergenic 55.0%
TTGGGCTTGGACTTCCCTGT+GGG - chr3.2:89205666-89205685 MS.gene42351:intron 55.0%
! GGTGGCGGTGTAGTAGAAAG+TGG + chr3.2:89201539-89201558 None:intergenic 55.0%
!! ATGGCGGTGACAGCCTTGTT+GGG + chr3.2:89205262-89205281 None:intergenic 55.0%
!! ATTTAGGGGTGTTCGCGGTG+CGG - chr3.2:89203795-89203814 MS.gene42351:intron 55.0%
!! GCACGGTTCGGTTTGGTTTG+CGG + chr3.2:89204332-89204351 None:intergenic 55.0%
ACGGCATGTTGTGTCCTCGC+CGG + chr3.2:89201884-89201903 None:intergenic 60.0%
CTTGGGCTTGGACTTCCCTG+TGG - chr3.2:89205665-89205684 MS.gene42351:intron 60.0%
GAAGATCACGGGTCATGGGC+TGG + chr3.2:89205715-89205734 None:intergenic 60.0%
GGGGGAGAAAAGCTTGGGAG+TGG + chr3.2:89205054-89205073 None:intergenic 60.0%
GGTTCCCTTAACGAGTGCCC+CGG + chr3.2:89204774-89204793 None:intergenic 60.0%
TCCCTGTGGGAATGAGACGG+GGG - chr3.2:89205679-89205698 MS.gene42351:intron 60.0%
TGGTGAACGCAGGAAGGCTC+AGG + chr3.2:89201963-89201982 None:intergenic 60.0%
TGTGTCCTCGCCGGTGAAGT+TGG + chr3.2:89201875-89201894 None:intergenic 60.0%
TTTCGTCGTTCGCTCGCTGC+CGG + chr3.2:89201914-89201933 None:intergenic 60.0%
! AGAGCACTCGGTGACCTCAC+AGG - chr3.2:89201993-89202012 MS.gene42351:CDS 60.0%
! GATGGCGGTGACAGCCTTGT+TGG + chr3.2:89205263-89205282 None:intergenic 60.0%
!! CTGAACCGCACGGTTCGGTT+TGG + chr3.2:89204339-89204358 None:intergenic 60.0%
!! GTTCGCGGTGCGGTTTGGTT+CGG - chr3.2:89203805-89203824 MS.gene42351:intron 60.0%
CCCCCCGTCTCATTCCCACA+GGG + chr3.2:89205683-89205702 None:intergenic 65.0%
CCCTGTGGGAATGAGACGGG+GGG - chr3.2:89205680-89205699 MS.gene42351:intron 65.0%
GGCGAGGACACAACATGCCG+TGG - chr3.2:89201883-89201902 MS.gene42351:CDS 65.0%
TCCCTTAACGAGTGCCCCGG+AGG + chr3.2:89204771-89204790 None:intergenic 65.0%
! GCCTCCGGGGCACTCGTTAA+GGG - chr3.2:89204767-89204786 MS.gene42351:intron 65.0%
! GGAGTGAGTGGTGGCGTAGC+CGG + chr3.2:89202380-89202399 None:intergenic 65.0%
! TGCCTCCGGGGCACTCGTTA+AGG - chr3.2:89204766-89204785 MS.gene42351:intron 65.0%
GCCCCCCGTCTCATTCCCAC+AGG + chr3.2:89205684-89205703 None:intergenic 70.0%
GCTCGCTGCCGGAGCTTCCA+CGG + chr3.2:89201903-89201922 None:intergenic 70.0%
! GGGGTGTTCGCGGTGCGGTT+TGG - chr3.2:89203800-89203819 MS.gene42351:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 89201500 89205823 89201500 ID=MS.gene42351
chr3.2 mRNA 89201500 89205823 89201500 ID=MS.gene42351.t1;Parent=MS.gene42351
chr3.2 exon 89205730 89205823 89205730 ID=MS.gene42351.t1.exon1;Parent=MS.gene42351.t1
chr3.2 CDS 89205730 89205823 89205730 ID=cds.MS.gene42351.t1;Parent=MS.gene42351.t1
chr3.2 exon 89205155 89205554 89205155 ID=MS.gene42351.t1.exon2;Parent=MS.gene42351.t1
chr3.2 CDS 89205155 89205554 89205155 ID=cds.MS.gene42351.t1;Parent=MS.gene42351.t1
chr3.2 exon 89204868 89205061 89204868 ID=MS.gene42351.t1.exon3;Parent=MS.gene42351.t1
chr3.2 CDS 89204868 89205061 89204868 ID=cds.MS.gene42351.t1;Parent=MS.gene42351.t1
chr3.2 exon 89201500 89202077 89201500 ID=MS.gene42351.t1.exon4;Parent=MS.gene42351.t1
chr3.2 CDS 89201500 89202077 89201500 ID=cds.MS.gene42351.t1;Parent=MS.gene42351.t1
Gene Sequence

>MS.gene42351

ATGCCAGAACCTCAGAAAAATACTTCACCACCAATGCCACTTTCTACTACACCGCCACCGTCAAAAAAGAAGCGAAATCTCCCTGGAATGCCAGGTGTATATAAATAAATATCCACTATTATATAAATAAATCATCGATTAAATTAAATATACACTTTCTTACTTTTATAATTATTAATTTATTTATTATTACTTACTTTTCGAAGTGTTAGTTTATTATATATGAGTATGAGAGTATTGAATCAATGTTTTGTTGTTTCCGTTCGCAGATCCAGACGCTGAAGTAATCGCTTTATCACCCAAAACTTTACTAGCAACCAACCGTTTCATATGCGAGATCTGTAACAAAGGATTCCAACGGGAACAGAATCTCCAACTTCACCGGCGAGGACACAACATGCCGTGGAAGCTCCGGCAGCGAGCGAACGACGAAATCCTCCGCAAGAAAGTGTACGTTTGTCCTGAGCCTTCCTGCGTTCACCACAATCCTTCAAGAGCACTCGGTGACCTCACAGGAGTGAAAAAGCACTTTTGTAGAAAGCACGGTGAGAAGAAATGGAAATGTGAACGTTGTTCTAAAAAATACGCTGCGAAATGTGATTTGAAAGTTCATATGAAGAACTGTGGAACTAGAGAGTATAAATGTGATTGTGGCACTGTGTTTTCTAGGTTAATTTCTTTTCCATCTTTAATTATCTCTCAAAATGTTGATTATTTTCTGTTTTGTTAATGTTATTTAATTATTTGTTTATTTGTTAATAGGAAGGATAATTTTGTTACGCACAGAAGGTTCTGCGATGGAATGGTGAATGAGAGTTGGAAGGAGGGTGGTAGTAGCAATAACGCTGTTGCCGTGGTTCCTTCTTCTTCTTCTTCACCGGCTACGCCACCACTCACTCCATCAACAATATCATCAGTGATGGTGTCTCCTACTTTGTCGTCTACTCAGTGCTCAGGTACGAGTTACTAGTAATTCATTTCCTATTTGGGTTTTGCACTTTTGTTTCCTGGTATCTCAAACCCGCCTTTGTTTTGGAAAACATTCGTCCACTATCAATTTGCAATTGCAAGGGATTGAGCAACCTTAATTTTCCACAAAAAACAATAAATTTAATTTCTTCAGAAGTACATTTCATTTGTTCTTTTTAATTGTGGTATTAAGGATATCATTAAATGACAAAACAAGTAAAAAAATTGTTATTTTGATAGGTTATTTATTTTTATTATTAACCATTTGTCATATTATTTTATCTAGGTTAATTAAGTTTTTAGTCCCTATAAATATTCACAGTTTTGTTTTTAGTCCCTATAAAATTTTCCGTCAGCATTTTTAGTCCTTATAAATTTTTTCATCAGCATTTTAGCCCCTGTCAAAAATTTCCATCAAGATTTTTGGTCCTTAAAGTGCTTAAGGAAAATGTCAAAGGGACTAAAAAATATGATTTTATTTTGTAGGAACTAAAACAAAACTGTGAATATTTATAGGGACTAGAAACTTAATTAACCCTTTTATCTATTTATCTCTCTATAATAAATTCCTTATTATTTGGATAAATGAAGCTGACATGATTTGAACTTGACACATGAGTGTTTTATTTTGTCTCTTCGCATATGCATTTATTTTGTTTTTCTCTGCCGCTGAGTAGTAATGCAGCCCACATTATGGATCCTCTCACACGATGACAATGGGACAGTGTGAGTCTTTGTGGGAAGGAGAATGAGAAGAGAAGACTAATTAAAGTTTTTTTTTTATTAAGAAAGACTAATTTAAGCCGAACACATTCTTATATGGTCACAGATAAAATAAATAGTATTTGGTGGCGCACACATAATTTTTTTAAATTACTAAATCATTTTATTATCAATTTTTTTTATTATTAAAAAAATATTTTAATATGTTTATGCTCAAATACTATTTATTTATTTATGTTAATGACCATAGTAAAAAATTTCTTTAAGTTGTATCTAGATGTAGCATGTGTTTTACTTATAAGAATATGATATTTGTAAAATCATTTTGTGACAACTTTTGATACAATATATTTTTTTTCATCTTCCTTTAGGTTATAATATGCGAGAGTAGTCCAAAAATTTGTCTCAAAATTATCGTACAAATATCATTTTTATTTACAGGTTGAGGGAGAAACCGAGACAACACAAAAATGAAATATACTCCCTCATCATATTATTCTCATTTAAATTGTGCATGATTATTAAAATAATGATTAATTTAAATTATAAAATGAGTTTTACTTACTAAAGTTAGACTAGATTATTTCGAAAGAATTGTGTGTAATTTAGGGGTGTTCGCGGTGCGGTTTGGTTCGGTTTTGAGCATAAAAGTCATCCAAACCGCGAGATAAAAAAGCATGCGGTTTGGTTTGGTTCGGTTGATTTTTAAAAAGTCATCTAAACCAAACCAAACCAAACCAATGCGGTTTGGATTGGTTCGGTTTGTGCGGTTTATCGCGAGATAAAAAAGATATTACATTAACTCTAATATTGCCAACTTTTTACAAAATAAACATAGGACATTTTATTTTGTTGTTTATATGATAAAATATTATGTAAAACTTATATCAAAATAGGTAAAGTTAAGAAGAAACATAAGCATGAAACAAATTATTGGGAAGTAAAGGAAACAAATTCATCACTGGAAATGAATTGAAAGAGATGGAAAGGAATTAGAATCGAACCTGATGTGCAACAATGGAAAAATCGAATCAAAAGAAAATATTCTTGAGCTATGTAATTGGGCTAGTACATATTTAAGTAATATTCATTATTCTTGCGGTTTGGTTTGGTTTGGTTTGGTTGCTGAGATGCAAACCGCAAACCAAACCGAACCGTGCGGTTCAGTGCAAAAGTCATCCGAATTCATCCGAACCAAGTGCGGTTTTTTGCGGTTTTGGTTTGGATTGGTTTGGTTTGCGGTTTTTCTATTGGGTTGGTTCGGTTTTGAACACCCCTAGTGTAATTTACTCAGCAACTAATGTAAATGAGTCACGTAAGTAAATTTGTAAGTTGAGTAAAACTTAATTTGTAAGTAGCACTTGTAAATTTACTTGTGTGGTTAATGCTTATTAATTTTTGGAAGAATTACCTGCAATTCTTCCATGATAATCTAGAAAAGTTTTTACTTCAAAGATCTTTATTAATCATGGTTAATGAAATTGTCAAGTGAATTGAGCTATCATAACTAAGAGTTTATTAATGAAAAGCATTAATTCATACTTTAATGTTATTATAAGGAAAATGTTAACGAGTGCCTCCGGGGCACTCGTTAAGGGAACCAAATATAGTATAAGGACCTTGAAACTTGTGTAGTCAAAGTTTAAAAAATGTAAAGAATTATGTTTTCAATGCAAATATTTCCTTTTTTGTTTCCTTAACTAGTGCCCGGGGCATTAGTTAACAAGACCCTTGTTATAAAGTGACAATTGATCCTAAATGAACAGGGAAGGCAGTGTAAGTCAAAAGGGGAAAATAATAGGAAGGTCATTTATAACTGTTTTTTCCCGTTTTGCTCTATGCATTCAATGATTCAATCCCCACTCCCAAGCTTTTCTCCCCCTTGTGTTTCACTGTTTCAGGTTATAATATATGTAAAAATCTTTTCTTTTTTTAAATTTTCTCAATCAGGTTAATTTATTTTCATTTGCAACTTTTTTTGAAGTCTTTATTCATTGTTTTATGCTATCCATTAGTTGTTTTTTCAAGATTATTTTTGCTTTGATTGTAATCAGACATTGCAGAAAACCCAACAAGGCTGTCACCGCCATCTTCAAACGCTTCTACTTCTACTTCTACTAGCTGTTGTTCTTCTTTCAGCAGTCTCATGTCAAGCTTGCCTCACTCAGATATCCCCACATCTTTCTCTATCACAGAACCCACAACCCTCTCACTTTTCACACCACTCTATCTCTCCAATAACAACAACAATGATCACCCTTTTCCCCATTACAAAACTGCATCTCCACAACCTGTATTATCTGCTACTGCATTACTCCAAAAAGCTGCTCAAGTGGGTTCATCTTCATCCAATGCATCCTTGCTTCGTGCTTTAGGCTTGAAAGACAACAGTGTCAGTATTAGCAGCACCACAACAGATCAATGGAATAACCATGGTCATGTAAAACAAGAGAATGAGCCTGTGGCAGATTATCTTGGGCTTGGACTTCCCTGTGGGAATGAGACGGGGGGCTCATCGAACCAGCCCATGACCCGTGATCTTCTCGGTCTTAGCATGGGATTGGGTAGAGAGGATGATGATCTTTCTGCTTTGCTCACATCTTTTGGAGGGAACTTCGATTCACCTGCATAG
Protein sequence

>MS.gene42351.t1

MPEPQKNTSPPMPLSTTPPPSKKKRNLPGMPDPDAEVIALSPKTLLATNRFICEICNKGFQREQNLQLHRRGHNMPWKLRQRANDEILRKKVYVCPEPSCVHHNPSRALGDLTGVKKHFCRKHGEKKWKCERCSKKYAAKCDLKVHMKNCGTREYKCDCGTVFSRKDNFVTHRRFCDGMVNESWKEGGSSNNAVAVVPSSSSSPATPPLTPSTISSVMVSPTLSSTQCSDIAENPTRLSPPSSNASTSTSTSCCSSFSSLMSSLPHSDIPTSFSITEPTTLSLFTPLYLSNNNNNDHPFPHYKTASPQPVLSATALLQKAAQVGSSSSNASLLRALGLKDNSVSISSTTTDQWNNHGHVKQENEPVADYLGLGLPCGNETGGSSNQPMTRDLLGLSMGLGREDDDLSALLTSFGGNFDSPA