AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42469

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42469.t1 MTR_4g061370 82.906 351 43 1 1 351 87 420 0.0 596
MS.gene42469.t1 MTR_6g086300 75.093 269 42 3 769 1012 212 480 7.08e-126 394
MS.gene42469.t1 MTR_6g086300 75.093 269 42 3 769 1012 212 480 7.08e-126 394
MS.gene42469.t1 MTR_8g083530 57.099 324 109 5 714 1012 163 481 2.21e-105 340
MS.gene42469.t1 MTR_6g086340 63.569 269 73 3 769 1012 210 478 1.14e-97 319
MS.gene42469.t1 MTR_8g083520 59.480 269 51 4 769 1012 124 359 5.06e-93 302
MS.gene42469.t1 MTR_8g083520 59.480 269 51 4 769 1012 204 439 1.29e-91 301
MS.gene42469.t1 MTR_6g453220 83.243 185 27 2 558 741 294 475 4.67e-84 282
MS.gene42469.t1 MTR_7g098550 75.141 177 40 2 479 651 192 368 3.32e-70 239
MS.gene42469.t1 MTR_7g098550 71.809 188 49 2 479 662 192 379 1.06e-69 242
MS.gene42469.t1 MTR_8g064170 43.657 268 126 3 769 1011 219 486 1.44e-67 236
MS.gene42469.t1 MTR_8g064170 43.657 268 126 3 769 1011 251 518 2.56e-67 236
MS.gene42469.t1 MTR_3g078170 46.468 269 119 3 769 1012 252 520 1.07e-66 235
MS.gene42469.t1 MTR_4g107040 43.123 269 128 3 769 1012 254 522 4.30e-65 230
MS.gene42469.t1 MTR_7g098550 68.617 188 47 3 479 662 192 371 3.11e-63 224
MS.gene42469.t1 MTR_6g033835 80.909 110 21 0 1 110 1 110 1.49e-54 187
MS.gene42469.t1 MTR_8g083530 53.684 190 73 4 714 893 163 347 6.23e-49 179
MS.gene42469.t1 MTR_3g078170 48.677 189 87 2 769 947 252 440 1.56e-46 174
MS.gene42469.t1 MTR_3g078170 49.727 183 82 2 769 941 252 434 2.21e-46 173
MS.gene42469.t1 MTR_3g078170 50.000 180 80 2 769 938 252 431 3.82e-46 172
MS.gene42469.t1 MTR_5g006530 80.208 96 19 0 203 298 151 246 5.32e-43 169
MS.gene42469.t1 MTR_3g078550 36.059 269 144 5 770 1011 175 442 1.27e-42 163
MS.gene42469.t1 MTR_3g078550 36.059 269 144 5 770 1011 205 472 1.61e-42 163
MS.gene42469.t1 MTR_4g106510 33.457 269 151 5 770 1011 205 472 4.17e-40 156
MS.gene42469.t1 MTR_3g078490 34.201 269 149 5 770 1011 235 502 2.00e-39 155
MS.gene42469.t1 MTR_1g022040 41.872 203 114 2 479 677 190 392 8.10e-38 149
MS.gene42469.t1 MTR_7g080575 60.448 134 23 2 95 201 276 406 1.34e-37 154
MS.gene42469.t1 MTR_2g067660 31.752 274 164 5 758 1009 227 499 1.62e-30 127
MS.gene42469.t1 MTR_1690s0010 38.012 171 96 3 750 911 181 350 1.72e-30 124
MS.gene42469.t1 MTR_1g013170 67.925 106 34 0 624 729 186 291 1.08e-26 115
MS.gene42469.t1 MTR_1g013170 70.732 41 12 0 725 765 409 449 1.68e-11 68.6
MS.gene42469.t1 MTR_2g072400 36.364 198 112 6 478 662 190 386 1.64e-25 112
MS.gene42469.t1 MTR_6g073003 88.136 59 7 0 1009 1067 295 353 1.00e-24 108
MS.gene42469.t1 MTR_2g072310 37.725 167 94 5 478 634 25 191 1.70e-24 107
MS.gene42469.t1 MTR_2g072380 37.126 167 95 5 478 634 25 191 2.92e-24 106
MS.gene42469.t1 MTR_6g073003 88.136 59 7 0 1009 1067 295 353 3.04e-24 109
MS.gene42469.t1 MTR_4g113650 35.542 166 95 3 479 634 195 358 3.54e-24 108
MS.gene42469.t1 MTR_2g072340 37.126 167 95 4 478 634 190 356 9.54e-24 107
MS.gene42469.t1 MTR_2g072380 37.126 167 95 5 478 634 165 331 1.58e-23 106
MS.gene42469.t1 MTR_1g027170 69.014 71 22 0 1 71 13 83 1.68e-23 103
MS.gene42469.t1 MTR_7g055793 39.759 166 81 6 480 634 152 309 3.97e-23 104
MS.gene42469.t1 MTR_1g085680 36.196 163 97 4 478 634 195 356 6.87e-23 104
MS.gene42469.t1 MTR_7g055793 39.759 166 81 6 480 634 207 364 7.43e-23 104
MS.gene42469.t1 MTR_2g072250 34.731 167 99 2 478 634 188 354 1.06e-22 103
MS.gene42469.t1 MTR_8g469360 37.500 168 96 4 480 641 107 271 4.25e-22 100
MS.gene42469.t1 MTR_5g095230 34.132 167 100 3 478 634 188 354 5.53e-22 100
MS.gene42469.t1 MTR_5g095230 34.132 167 100 3 478 634 188 354 6.18e-22 101
MS.gene42469.t1 MTR_0147s0030 39.506 162 87 5 479 634 215 371 1.08e-21 100
MS.gene42469.t1 MTR_2g072260 36.527 167 96 4 478 634 185 351 1.84e-21 100
MS.gene42469.t1 MTR_3g106220 67.568 74 23 1 646 719 215 287 5.41e-21 99.4
MS.gene42469.t1 MTR_5g076960 85.417 48 7 0 304 351 110 157 2.38e-19 90.9
MS.gene42469.t1 MTR_7g117705 46.575 146 31 5 646 750 208 347 3.25e-19 92.4
MS.gene42469.t1 MTR_8g008530 36.196 163 93 5 480 634 199 358 7.06e-19 92.0
MS.gene42469.t1 MTR_5g076960 85.417 48 7 0 304 351 211 258 7.53e-19 90.9
MS.gene42469.t1 MTR_3g078490 38.406 138 74 3 770 897 205 341 1.75e-18 89.0
MS.gene42469.t1 MTR_6g017325 32.911 158 103 2 480 634 194 351 1.88e-18 90.5
MS.gene42469.t1 MTR_2g034160 27.473 273 165 8 770 1012 246 515 2.65e-18 90.5
MS.gene42469.t1 MTR_7g006900 30.435 207 128 5 480 679 158 355 1.00e-17 88.2
MS.gene42469.t1 MTR_2g072270 28.326 233 135 7 479 697 199 413 2.03e-17 87.4
MS.gene42469.t1 MTR_2g023680 30.303 165 105 2 480 634 194 358 2.21e-17 85.9
MS.gene42469.t1 MTR_2g023680 29.592 196 124 4 480 662 194 388 3.08e-17 86.7
MS.gene42469.t1 MTR_1g101040 33.333 171 109 5 468 634 186 355 3.74e-17 86.7
MS.gene42469.t1 MTR_7g006900 31.447 159 105 3 480 634 195 353 4.28e-17 85.1
MS.gene42469.t1 MTR_8g042000 29.891 184 110 4 461 634 190 364 4.89e-17 85.1
MS.gene42469.t1 MTR_2g076860 53.012 83 25 2 1 81 111 181 7.84e-17 81.6
MS.gene42469.t1 MTR_8g042000 31.138 167 104 3 478 634 199 364 7.87e-17 85.5
MS.gene42469.t1 MTR_8g042060 30.151 199 124 6 478 663 199 395 2.12e-16 84.3
MS.gene42469.t1 MTR_2g055430 32.335 167 103 5 478 634 192 358 5.25e-16 82.0
MS.gene42469.t1 MTR_2g055470 31.737 167 104 5 478 634 192 358 5.50e-16 82.8
MS.gene42469.t1 MTR_2g055430 32.335 167 103 5 478 634 192 358 6.97e-16 82.4
MS.gene42469.t1 MTR_4g031820 34.021 194 116 7 480 662 206 398 6.98e-16 82.4
MS.gene42469.t1 MTR_4g031820 34.973 183 107 7 480 651 206 387 1.26e-15 80.9
MS.gene42469.t1 MTR_8g042060 30.526 190 117 6 487 663 172 359 1.44e-15 81.3
MS.gene42469.t1 MTR_6g072490 32.164 171 111 5 468 634 184 353 2.18e-15 80.9
MS.gene42469.t1 MTR_1g101050 32.749 171 110 5 468 634 182 351 2.34e-15 80.9
MS.gene42469.t1 MTR_8g042020 30.539 167 104 5 478 634 199 363 7.59e-14 76.3
MS.gene42469.t1 MTR_1399s0020 30.508 177 108 3 845 1007 145 320 3.07e-13 72.8
MS.gene42469.t1 MTR_2g061200 32.955 176 92 6 480 634 196 366 7.74e-13 72.8
MS.gene42469.t1 MTR_0025s0110 30.178 169 111 4 472 634 199 366 9.57e-13 72.4
MS.gene42469.t1 MTR_1g071870 38.889 108 48 4 915 1012 164 263 2.86e-12 70.9
MS.gene42469.t1 MTR_3g093530 29.381 194 124 5 480 665 206 394 3.62e-12 70.9
MS.gene42469.t1 MTR_1g014320 25.856 263 165 6 769 1007 211 467 6.92e-12 69.7
MS.gene42469.t1 MTR_2g034960 50.704 71 30 1 646 716 228 293 1.13e-11 69.3
MS.gene42469.t1 MTR_4g121020 53.846 78 31 2 646 721 128 202 1.30e-11 68.9
MS.gene42469.t1 MTR_4g121020 53.846 78 31 2 646 721 232 306 1.57e-11 68.9
MS.gene42469.t1 MTR_4g121020 53.846 78 31 2 646 721 232 306 1.60e-11 68.9
MS.gene42469.t1 MTR_1g032570 63.462 52 19 0 646 697 148 199 2.48e-11 68.2
MS.gene42469.t1 MTR_1g013180 53.086 81 27 2 646 722 359 432 2.94e-11 68.2
MS.gene42469.t1 MTR_1g032570 63.462 52 19 0 646 697 217 268 3.03e-11 68.2
MS.gene42469.t1 MTR_3g102600 60.784 51 16 1 646 696 100 146 9.37e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42469.t1 AT3G24503 57.993 269 88 3 769 1012 211 479 6.64e-92 303
MS.gene42469.t1 AT3G48000 46.125 271 121 3 767 1012 246 516 1.53e-69 243
MS.gene42469.t1 AT1G23800 46.097 269 120 3 769 1012 244 512 8.00e-68 238
MS.gene42469.t1 AT1G75130 49.682 157 78 1 479 634 190 346 5.14e-43 165
MS.gene42469.t1 AT1G74920 34.944 269 147 5 770 1011 200 467 4.96e-41 159
MS.gene42469.t1 AT1G74920 34.944 269 147 5 770 1011 205 472 5.82e-41 159
MS.gene42469.t1 AT3G48170 34.201 269 149 5 770 1011 205 472 2.69e-40 157
MS.gene42469.t1 AT1G23800 48.227 141 63 2 769 899 244 384 4.38e-31 127
MS.gene42469.t1 AT2G26710 40.964 166 81 3 479 634 196 354 1.57e-29 125
MS.gene42469.t1 AT1G79440 29.167 264 163 3 770 1009 242 505 7.37e-25 110
MS.gene42469.t1 AT2G46950 33.636 220 126 5 483 697 256 460 6.61e-24 108
MS.gene42469.t1 AT3G14640 36.224 196 110 7 478 662 193 384 6.96e-24 107
MS.gene42469.t1 AT3G14620 35.256 156 100 1 480 634 198 353 7.20e-24 107
MS.gene42469.t1 AT3G14640 36.224 196 110 7 478 662 215 406 9.12e-24 107
MS.gene42469.t1 AT2G46960 36.076 158 98 3 479 634 83 239 1.10e-23 105
MS.gene42469.t1 AT2G46950 37.013 154 95 2 483 634 256 409 1.91e-23 105
MS.gene42469.t1 AT3G14690 33.333 195 116 5 478 662 192 382 2.87e-23 105
MS.gene42469.t1 AT3G14690 33.333 195 116 5 478 662 227 417 3.26e-23 105
MS.gene42469.t1 AT2G46960 36.076 158 98 3 479 634 199 355 3.52e-23 105
MS.gene42469.t1 AT4G27710 31.556 225 134 6 479 697 197 407 1.14e-22 103
MS.gene42469.t1 AT4G27710 37.037 162 94 4 479 634 197 356 2.92e-22 100
MS.gene42469.t1 AT3G14660 31.795 195 119 5 478 662 46 236 3.02e-22 100
MS.gene42469.t1 AT3G14630 32.812 192 121 4 478 662 188 378 3.71e-22 102
MS.gene42469.t1 AT3G14630 32.812 192 121 4 478 662 243 433 7.41e-22 101
MS.gene42469.t1 AT3G14650 32.821 195 117 5 478 662 192 382 1.15e-21 100
MS.gene42469.t1 AT3G14660 31.795 195 119 5 478 662 192 382 1.98e-21 100
MS.gene42469.t1 AT3G14680 31.250 192 124 4 478 662 192 382 2.00e-21 100
MS.gene42469.t1 AT3G14660 33.684 190 109 6 478 657 192 374 2.73e-21 98.2
MS.gene42469.t1 AT3G14610 29.870 231 136 6 475 697 190 402 1.75e-20 97.1
MS.gene42469.t1 AT3G17770 76.271 59 14 0 1011 1069 297 355 1.31e-19 94.7
MS.gene42469.t1 AT1G48430 74.576 59 15 0 1011 1069 297 355 1.79e-19 94.4
MS.gene42469.t1 AT1G48430 74.576 59 15 0 1011 1069 297 355 1.94e-19 94.4
MS.gene42469.t1 AT3G66658 26.568 271 170 8 770 1012 246 515 9.69e-16 82.4
MS.gene42469.t1 AT3G66658 26.568 271 170 8 770 1012 246 515 1.44e-15 81.6
MS.gene42469.t1 AT3G16857 51.948 77 31 1 646 722 184 254 1.29e-13 75.9
MS.gene42469.t1 AT3G16857 51.948 77 31 1 646 722 254 324 1.50e-13 75.5
MS.gene42469.t1 AT3G16857 51.948 77 31 1 646 722 254 324 1.71e-13 75.5
MS.gene42469.t1 AT5G38450 32.500 200 115 5 480 665 196 389 7.47e-12 69.7
MS.gene42469.t1 AT2G25180 66.038 53 18 0 646 698 212 264 7.96e-12 69.7
MS.gene42469.t1 AT5G38450 34.911 169 90 5 480 634 196 358 9.68e-12 68.9
MS.gene42469.t1 AT1G54100 27.778 198 118 5 791 968 240 432 5.63e-11 67.0
MS.gene42469.t1 AT1G54100 27.778 198 118 5 791 968 240 432 5.63e-11 67.0

Find 211 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTAACATATTAGCATAAT+TGG 0.086239 6.1:+68417398 None:intergenic
GGTTATGATCCTACACTTTA+TGG 0.145851 6.1:-68417591 MS.gene42469:CDS
CCATTCGAACAGGAGTTATT+TGG 0.188302 6.1:-68415280 MS.gene42469:CDS
GGTTGCTCCTTGCAAAATAA+TGG 0.220426 6.1:-68417771 MS.gene42469:CDS
ACTGGTAAGGTTAGCTTTAC+TGG 0.225096 6.1:-68415851 MS.gene42469:CDS
ATCTTAACCTGCTTGCTTTC+CGG 0.240960 6.1:+68418146 None:intergenic
TGAGGACCTTGTTGAACTTT+AGG 0.247900 6.1:+68415560 None:intergenic
AAACCAGCTTCACTTGAATT+AGG 0.247929 6.1:-68415782 MS.gene42469:CDS
ATTTATGACTTCTCTTGATA+TGG 0.249088 6.1:-68415150 MS.gene42469:CDS
CTGAAACTAAAACTCCTTAT+TGG 0.266183 6.1:-68415070 MS.gene42469:CDS
TATTAACCGTGCTGCTATTA+AGG 0.266903 6.1:-68415954 MS.gene42469:CDS
TCTTAACCTGCTTGCTTTCC+GGG 0.267579 6.1:+68418147 None:intergenic
TTAGATAGAGTATATACTTC+TGG 0.274368 6.1:+68416182 None:intergenic
CAAACCGAGAACGATGTAAT+TGG 0.274499 6.1:-68417792 MS.gene42469:CDS
AGTAACTGTGACAAAGAATT+TGG 0.283055 6.1:-68415327 MS.gene42469:CDS
TGGTTGCGACACATTCTTTA+GGG 0.293767 6.1:+68417235 None:intergenic
ACAGAAGGTGCAATGGTATT+TGG 0.304024 6.1:-68416027 MS.gene42469:CDS
GCCAGGCTTCTTGCTGGCCA+TGG 0.327168 6.1:-68416876 MS.gene42469:CDS
TTGGTTGCGACACATTCTTT+AGG 0.328802 6.1:+68417234 None:intergenic
TATTGGCCTGTTGGAGTTAG+TGG 0.331545 6.1:-68415053 MS.gene42469:CDS
CAAAATAATGGGAAGCATAT+TGG 0.332457 6.1:-68417759 MS.gene42469:CDS
ATTAATTGCTACTTTGCCTT+TGG 0.339812 6.1:-68415257 MS.gene42469:CDS
TCCAACTACACTTCTTAAAT+AGG 0.345820 6.1:+68416090 None:intergenic
AATAGCTAAATCCAGGGATA+TGG 0.347520 6.1:+68416629 None:intergenic
TTTGGAAATGACATTCTCTA+TGG 0.347796 6.1:-68415239 MS.gene42469:CDS
TCCTTCTCCAAGTTCGAATA+GGG 0.349178 6.1:+68418045 None:intergenic
TGATGAGGATAACTCACTTT+TGG 0.349215 6.1:-68417568 MS.gene42469:CDS
CATCCGGCCAGGCTTCTTGC+TGG 0.350968 6.1:-68416882 MS.gene42469:CDS
GAAAAGAGGGTAAATCAATT+AGG 0.353286 6.1:-68416286 MS.gene42469:CDS
TGGAATATTGTTTGTTATAG+AGG 0.356244 6.1:-68416847 MS.gene42469:CDS
TTCAACAAGACGTGAAATAA+TGG 0.361036 6.1:-68415828 MS.gene42469:CDS
TGAGGCTAGTGACTGTGTTC+TGG 0.362072 6.1:-68417721 MS.gene42469:CDS
AAGGGAGAAATTTGTGTTGC+GGG 0.367098 6.1:-68415677 MS.gene42469:CDS
CTAACTCCAACAGGCCAATA+AGG 0.369531 6.1:+68415056 None:intergenic
TGTACAACCTTCAATGAAAC+TGG 0.374031 6.1:-68417265 MS.gene42469:CDS
ATCCTTCTCCAAGTTCGAAT+AGG 0.376656 6.1:+68418044 None:intergenic
TTAACATTGGAGAAAATTGT+AGG 0.377777 6.1:+68415422 None:intergenic
GAATGTAAAACCTACTTTGC+TGG 0.377877 6.1:-68416421 MS.gene42469:CDS
GTATGTTGAATTATGAAAAT+CGG 0.382527 6.1:+68417857 None:intergenic
CGAATTTGTTTGTTGATTTG+CGG 0.389090 6.1:+68417071 None:intergenic
ATTAACATATTAGCATAATT+GGG 0.390652 6.1:+68417399 None:intergenic
GGAAGATAAGTGTTTGTTCC+AGG 0.392171 6.1:+68415986 None:intergenic
ATTCCTTGCTGAAGTTGTAT+AGG 0.394035 6.1:+68417330 None:intergenic
GAAGAAGTGCCAAAGTTAAC+AGG 0.394527 6.1:+68416380 None:intergenic
GTTGCTCCTTGCAAAATAAT+GGG 0.395260 6.1:-68417770 MS.gene42469:CDS
TTCGATGTAGTACCTGGATT+TGG 0.399971 6.1:-68415887 MS.gene42469:CDS
CCCATGGCCAGCAAGAAGCC+TGG 0.405024 6.1:+68416875 None:intergenic
GGGTCTGGTGGTGGCGGAGA+GGG 0.405348 6.1:+68417141 None:intergenic
TTCAAACAATCATCGTTGTC+TGG 0.414533 6.1:+68417117 None:intergenic
TTCAACATACTTGTTATCAA+TGG 0.415765 6.1:-68417844 MS.gene42469:CDS
CCAGGCTTCTTGCTGGCCAT+GGG 0.416133 6.1:-68416875 MS.gene42469:CDS
TGAATTTGAGAAGAAGTTAG+TGG 0.419217 6.1:-68415621 MS.gene42469:CDS
TGAAAAGTACCGCATCTGTT+TGG 0.421832 6.1:-68418109 MS.gene42469:CDS
TTCTTCTGCTGCTACCTCCT+TGG 0.422392 6.1:+68417215 None:intergenic
TATTTCAATTTATCTTTCCT+CGG 0.422841 6.1:+68414369 None:intergenic
TGGGTCTGGTGGTGGCGGAG+AGG 0.429189 6.1:+68417140 None:intergenic
GTGAAAGTTCAGACTGTGAT+TGG 0.429225 6.1:-68417434 MS.gene42469:CDS
CCTCCTAATTCAAGTGAAGC+TGG 0.438912 6.1:+68415779 None:intergenic
AGTTGGTTTGGAAGAGATTG+TGG 0.439358 6.1:-68415203 MS.gene42469:CDS
AACATCTAACCTGTTAACTT+TGG 0.439400 6.1:-68416389 MS.gene42469:CDS
GGTTACAAGATGAGTTGGTT+TGG 0.444090 6.1:-68415215 MS.gene42469:CDS
TTGTCTGGTGGGTCTGGTGG+TGG 0.444717 6.1:+68417132 None:intergenic
TCATCGTTGTCTGGTGGGTC+TGG 0.445440 6.1:+68417126 None:intergenic
GATACTTAATGATCATTGCT+TGG 0.446314 6.1:-68417637 MS.gene42469:CDS
TGCATCTGAACTACTAGTTA+AGG 0.446478 6.1:+68416114 None:intergenic
TGTTGAACTTTAGGATCAAA+AGG 0.452062 6.1:+68415569 None:intergenic
TCTGGTGGGTCTGGTGGTGG+CGG 0.452363 6.1:+68417135 None:intergenic
GTTGACAAATAGCTAAATCC+AGG 0.454203 6.1:+68416622 None:intergenic
GCAACCAATTACATCGTTCT+CGG 0.457742 6.1:+68417788 None:intergenic
TCCTATTTAAGAAGTGTAGT+TGG 0.463038 6.1:-68416091 MS.gene42469:CDS
CGATTACCACTAACTCCAAC+AGG 0.467093 6.1:+68415047 None:intergenic
AGTGTCAACAATAAAAGATA+TGG 0.467971 6.1:-68415359 MS.gene42469:CDS
ATTATTTCATATATTGAGCA+TGG 0.477894 6.1:-68415512 MS.gene42469:CDS
GAGGCTGAGTTGCATATTCA+AGG 0.480186 6.1:-68417480 MS.gene42469:CDS
GGAAAACAAACAAGGTCATA+TGG 0.480991 6.1:-68416143 MS.gene42469:CDS
TTTATCAATTTCTATCATGA+AGG 0.481455 6.1:-68415123 MS.gene42469:CDS
GTCGATTTCCTTCCTAGTGA+TGG 0.481687 6.1:-68416911 MS.gene42469:CDS
CAACTAAGAAGAACAAAGAT+AGG 0.482446 6.1:-68416603 MS.gene42469:CDS
GCACGGTTAATAGATTCTCT+TGG 0.482574 6.1:+68415965 None:intergenic
CAACTCAGCCTCAACTGAAT+CGG 0.484787 6.1:+68417491 None:intergenic
CCAAATAACTCCTGTTCGAA+TGG 0.486479 6.1:+68415280 None:intergenic
GAAAGAACCCTATTCGAACT+TGG 0.486536 6.1:-68418052 MS.gene42469:CDS
TTGTACATCATGAATTGAAC+CGG 0.489346 6.1:+68417281 None:intergenic
AAAACTCCTTATTGGCCTGT+TGG 0.493692 6.1:-68415062 MS.gene42469:CDS
CTCAAGTTGTGTTGTACGCA+TGG 0.493785 6.1:+68415394 None:intergenic
ATCTGAAATTCCAGCCGGTA+TGG 0.495993 6.1:+68415916 None:intergenic
CATTAGCATCGTATTTAACA+AGG 0.497087 6.1:-68415696 MS.gene42469:CDS
ATGGAGGTTACAAGATGAGT+TGG 0.499635 6.1:-68415220 MS.gene42469:CDS
TTACCAGTCATCTGAATTCG+AGG 0.500810 6.1:-68416995 MS.gene42469:CDS
TGGCCAGCAAGAAGCCTGGC+CGG 0.502144 6.1:+68416879 None:intergenic
GTATCAAGGTCCATTCGAAC+AGG 0.502385 6.1:-68415290 MS.gene42469:CDS
AAGACACGTGAAGAAATTGA+TGG 0.504719 6.1:-68416328 MS.gene42469:CDS
AAAGCAAGAGCTTGGGCTGT+TGG 0.506234 6.1:-68415596 MS.gene42469:CDS
TCAGTATATCCACCCTTCAC+TGG 0.508342 6.1:+68417906 None:intergenic
AACAATCATCGTTGTCTGGT+GGG 0.512866 6.1:+68417121 None:intergenic
CTAGAGAAGCAATTGAAAAG+AGG 0.512949 6.1:-68416300 MS.gene42469:CDS
TGACTGTGTTCTGGCTGAAG+TGG 0.513722 6.1:-68417712 MS.gene42469:CDS
CCTGCAGTTGCACCAAATCC+AGG 0.513945 6.1:+68415875 None:intergenic
GGAGTATTCGATGTAGTACC+TGG 0.515308 6.1:-68415893 MS.gene42469:CDS
TATTAGCAAAATATCAAGAA+TGG 0.516199 6.1:-68416357 MS.gene42469:CDS
TTTCGTGTGTTTGTTCAAGA+AGG 0.516942 6.1:-68415653 MS.gene42469:CDS
TTTCTGCAGATGTTATATCA+AGG 0.517188 6.1:-68416744 MS.gene42469:CDS
TGTTCGAATGGACCTTGATA+CGG 0.520311 6.1:+68415292 None:intergenic
GATGGAGTGTCCATCCGGCC+AGG 0.521277 6.1:-68416893 MS.gene42469:CDS
AGTTTCTACAAGAATGAAGT+TGG 0.522151 6.1:-68416481 MS.gene42469:CDS
GTTGGAAGTGTCCATATCCC+TGG 0.522842 6.1:-68416640 MS.gene42469:CDS
TTTGGTGCAACTGCAGGAAC+TGG 0.523481 6.1:-68415869 MS.gene42469:CDS
TCAGATAATTGTGGTAGTCC+TGG 0.523806 6.1:-68417612 MS.gene42469:CDS
CTAGTGATGGAGTGTCCATC+CGG 0.524370 6.1:-68416898 MS.gene42469:CDS
TTGTTATAGAGGTGTATTGA+AGG 0.525389 6.1:-68416836 MS.gene42469:CDS
TGGAGAAGATAGACTACAGC+TGG 0.525660 6.1:-68416458 MS.gene42469:CDS
ATAACATCTGCAGAAAGATC+AGG 0.525890 6.1:+68416751 None:intergenic
TAAAGTTCAACAAGGTCCTC+AGG 0.526739 6.1:-68415558 MS.gene42469:CDS
CTTGCTGGCCATGGGTGCCG+TGG 0.529511 6.1:-68416867 MS.gene42469:CDS
TAGTGGACAAAGCAAGAGCT+TGG 0.531745 6.1:-68415604 MS.gene42469:CDS
AAAGTACCGCATCTGTTTGG+AGG 0.533668 6.1:-68418106 MS.gene42469:CDS
CCTGGATTTGGTGCAACTGC+AGG 0.534107 6.1:-68415875 MS.gene42469:CDS
ATGACTTCTCTTGATATGGA+AGG 0.538051 6.1:-68415146 MS.gene42469:CDS
CTACTTTACTTGAAAACAGA+AGG 0.542032 6.1:-68416042 MS.gene42469:CDS
AGTGGACAAAGCAAGAGCTT+GGG 0.542455 6.1:-68415603 MS.gene42469:CDS
CCAGCTTCACTTGAATTAGG+AGG 0.544210 6.1:-68415779 MS.gene42469:CDS
CAGCAAGAAGCCTGGCCGGA+TGG 0.546158 6.1:+68416883 None:intergenic
GATGTAGCAACTCTTTCGAC+AGG 0.546232 6.1:-68415482 MS.gene42469:CDS
GTTTGGAAGAGATTGTGGAT+TGG 0.547188 6.1:-68415198 MS.gene42469:CDS
AAACAATCATCGTTGTCTGG+TGG 0.555022 6.1:+68417120 None:intergenic
ATATAGCAAGCACCGTATCA+AGG 0.555289 6.1:-68415304 MS.gene42469:CDS
GGAAATGACATTCTCTATGG+AGG 0.556285 6.1:-68415236 MS.gene42469:CDS
TCAAGCACAATGCAACTACC+TGG 0.556515 6.1:-68416004 MS.gene42469:CDS
TAGAGAAGCAATTGAAAAGA+GGG 0.557169 6.1:-68416299 MS.gene42469:CDS
AGACGTCCCGGAAAGCAAGC+AGG 0.557424 6.1:-68418153 MS.gene42469:CDS
GATGTATCAACCGCCAGTGA+AGG 0.558288 6.1:-68417919 MS.gene42469:CDS
TTCTACAAGAATGAAGTTGG+TGG 0.559129 6.1:-68416478 MS.gene42469:CDS
TTTCGACGTCATAGACGTCC+CGG 0.559596 6.1:-68418165 MS.gene42469:CDS
CTTGAAAACAGAAGGTGCAA+TGG 0.560167 6.1:-68416034 MS.gene42469:CDS
CGGATGGACACTCCATCACT+AGG 0.563561 6.1:+68416899 None:intergenic
CTTCCTCGAATTCAGATGAC+TGG 0.564432 6.1:+68416992 None:intergenic
TATCAGATGATGCATATGCT+TGG 0.564518 6.1:-68417527 MS.gene42469:CDS
CAAATAGATGAACTGAATGC+CGG 0.567205 6.1:-68417300 MS.gene42469:CDS
ACAAGTCTGATCAATCGAAA+GGG 0.569603 6.1:-68417456 MS.gene42469:CDS
CAACCGTCACATTGAACTCA+AGG 0.569645 6.1:-68415000 MS.gene42469:CDS
TGAAAGTTCAGACTGTGATT+GGG 0.569942 6.1:-68417433 MS.gene42469:CDS
ACGCATGGCCTCCTTAACAT+TGG 0.573171 6.1:+68415409 None:intergenic
CAAGGGAGAAATTTGTGTTG+CGG 0.575569 6.1:-68415678 MS.gene42469:CDS
ACAATATTCCACGGCACCCA+TGG 0.576044 6.1:+68416859 None:intergenic
TGAAAATCTGACATGGGAGA+AGG 0.576529 6.1:-68416218 MS.gene42469:CDS
TCGTTAAAGACCATACCGGC+TGG 0.577034 6.1:-68415926 MS.gene42469:CDS
TATTTAAGAAGTGTAGTTGG+AGG 0.577577 6.1:-68416088 MS.gene42469:CDS
TGCAACTGCAGGAACTGGTA+AGG 0.578355 6.1:-68415864 MS.gene42469:CDS
ATGTATCAACCGCCAGTGAA+GGG 0.579389 6.1:-68417918 MS.gene42469:CDS
TATATACTTCTGGAGACGGC+TGG 0.581516 6.1:+68416192 None:intergenic
AACAAGTCTGATCAATCGAA+AGG 0.582103 6.1:-68417457 MS.gene42469:CDS
ACCCTATTCGAACTTGGAGA+AGG 0.585464 6.1:-68418046 MS.gene42469:CDS
TGATTGTTTGAAAGAAGAGA+AGG 0.588098 6.1:-68417106 MS.gene42469:CDS
ATACCGGCTGGAATTTCAGA+TGG 0.591251 6.1:-68415914 MS.gene42469:CDS
ATAGAGAATGTCATTTCCAA+AGG 0.592177 6.1:+68415241 None:intergenic
TGGTGTAGATTTGCATCATG+AGG 0.595637 6.1:-68417739 MS.gene42469:CDS
AGAGTATATACTTCTGGAGA+CGG 0.598440 6.1:+68416188 None:intergenic
AAGTACCGCATCTGTTTGGA+GGG 0.598450 6.1:-68418105 MS.gene42469:CDS
AATTGCCTCTTGTCAACCTG+AGG 0.599117 6.1:+68415542 None:intergenic
TCTAATCGTTGAAGAATAGA+CGG 0.601987 6.1:+68415095 None:intergenic
TCCTACACTTTATGGTGATG+AGG 0.603546 6.1:-68417583 MS.gene42469:CDS
TAAAGAATGTGTCGCAACCA+AGG 0.604764 6.1:-68417232 MS.gene42469:CDS
GTATATCCACCCTTCACTGG+CGG 0.605481 6.1:+68417909 None:intergenic
GGAAGCAACTCTCGTCGCCA+CGG 0.605858 6.1:-68417941 MS.gene42469:CDS
GATGATGCATATGCTTGGAA+AGG 0.608664 6.1:-68417522 MS.gene42469:CDS
AGACACGTGAAGAAATTGAT+GGG 0.609154 6.1:-68416327 MS.gene42469:CDS
GATTTCGTTAAAGACCATAC+CGG 0.610022 6.1:-68415930 MS.gene42469:CDS
TCGTTGTCTGGTGGGTCTGG+TGG 0.611233 6.1:+68417129 None:intergenic
GCAAACTGATTGAAACCAAG+AGG 0.611708 6.1:-68416546 MS.gene42469:CDS
ATTGAAGGCTGATTTAATTG+CGG 0.617138 6.1:-68416821 MS.gene42469:CDS
TTATATATCCGATTCAGTTG+AGG 0.617814 6.1:-68417499 MS.gene42469:CDS
ACTCCATCTGAAATTCCAGC+CGG 0.619008 6.1:+68415911 None:intergenic
TGGACACTCCATCACTAGGA+AGG 0.625199 6.1:+68416903 None:intergenic
CTAAGAAGAACAAAGATAGG+TGG 0.625403 6.1:-68416600 MS.gene42469:CDS
ATTCCTTGAGTTCAATGTGA+CGG 0.627073 6.1:+68414997 None:intergenic
CATGCGTACAACACAACTTG+AGG 0.628389 6.1:-68415393 MS.gene42469:CDS
CTATAACAAACAATATTCCA+CGG 0.628635 6.1:+68416850 None:intergenic
GGCAAACTTAGCGAAACTGC+AGG 0.631047 6.1:+68416937 None:intergenic
TGTTGATTTGCGGTAGCAAG+TGG 0.632722 6.1:+68417081 None:intergenic
CATGAAAGATTTAACTCTCG+CGG 0.633915 6.1:-68418008 MS.gene42469:CDS
TGCTTGGCATCAGATAATTG+TGG 0.638188 6.1:-68417621 MS.gene42469:CDS
ATTAGCATCGTATTTAACAA+GGG 0.639693 6.1:-68415695 MS.gene42469:CDS
TATCAACCGCCAGTGAAGGG+TGG 0.639862 6.1:-68417915 MS.gene42469:CDS
GGAGAGGGAACTGAGTCCGA+TGG 0.642062 6.1:+68417156 None:intergenic
TTGACAAATAGCTAAATCCA+GGG 0.645575 6.1:+68416623 None:intergenic
GAAGGGTGGATATACTGAAG+AGG 0.646866 6.1:-68417901 MS.gene42469:CDS
TCCTCATCACCATAAAGTGT+AGG 0.649583 6.1:+68417582 None:intergenic
TCTGAATTCGAGGAAGTGCA+AGG 0.652298 6.1:-68416985 MS.gene42469:CDS
AAATCTGACATGGGAGAAGG+CGG 0.652430 6.1:-68416215 MS.gene42469:CDS
AAGGTCCTCAGGTTGACAAG+AGG 0.654761 6.1:-68415547 MS.gene42469:CDS
GGGTGGATATACTGAAGAGG+CGG 0.655174 6.1:-68417898 MS.gene42469:CDS
TTGTTGATCAAGTATACACA+TGG 0.655805 6.1:-68415175 MS.gene42469:CDS
TGAATGTTGAAAATCTGACA+TGG 0.668917 6.1:-68416225 MS.gene42469:CDS
TCAATGTGACGGTTGTGATG+CGG 0.669090 6.1:+68415008 None:intergenic
TGAAGTGGATGACAAAAGAG+AGG 0.672707 6.1:-68417697 MS.gene42469:CDS
TTTGATCCTAAAGTTCAACA+AGG 0.673250 6.1:-68415566 MS.gene42469:CDS
AGTTGTGTGGAAAACAAACA+AGG 0.675905 6.1:-68416151 MS.gene42469:CDS
GAATGTTGAAAATCTGACAT+GGG 0.676073 6.1:-68416224 MS.gene42469:CDS
ATGTGACGGTTGTGATGCGG+CGG 0.682747 6.1:+68415011 None:intergenic
TCTCCTATACAACTTCAGCA+AGG 0.689990 6.1:-68417333 MS.gene42469:CDS
AGTTGTATAGGAGAGCCCGA+TGG 0.690080 6.1:+68417342 None:intergenic
AGTTCAGACTGTGATTGGGA+TGG 0.696786 6.1:-68417429 MS.gene42469:CDS
AAATCTCCTTAATAGCAGCA+CGG 0.702456 6.1:+68415948 None:intergenic
TCTATCCCTCCAAACAGATG+CGG 0.706434 6.1:+68418100 None:intergenic
TAAAGTGTAGGATCATAACC+AGG 0.713959 6.1:+68417594 None:intergenic
ACTAGGAAGGAAATCGACGA+CGG 0.716999 6.1:+68416916 None:intergenic
AAATCAATTAGGCATTGACA+AGG 0.718827 6.1:-68416275 MS.gene42469:CDS
ACTGGCGGTTGATACATCCG+TGG 0.722661 6.1:+68417924 None:intergenic
AGAATGTGTCGCAACCAAGG+AGG 0.723095 6.1:-68417229 MS.gene42469:CDS
AAAAGTTCGAGATTTCGACA+AGG 0.753045 6.1:+68417189 None:intergenic
CATCTGCAGAAAGATCAGGA+AGG 0.757365 6.1:+68416755 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTCGTTTTATTTTATTT+TGG - chr6.1:68417890-68417909 MS.gene42469:CDS 10.0%
!! AATTAACATATTAGCATAAT+TGG + chr6.1:68415195-68415214 None:intergenic 15.0%
!! AGCATTATAAAAAATTAAGA+GGG + chr6.1:68416845-68416864 None:intergenic 15.0%
!! ATTAACATATTAGCATAATT+GGG + chr6.1:68415194-68415213 None:intergenic 15.0%
!! ATTATTTCATATATTGAGCA+TGG - chr6.1:68417078-68417097 MS.gene42469:CDS 20.0%
!! CAGCATTATAAAAAATTAAG+AGG + chr6.1:68416846-68416865 None:intergenic 20.0%
!! GCATTATAAAAAATTAAGAG+GGG + chr6.1:68416844-68416863 None:intergenic 20.0%
!! GTATGTTGAATTATGAAAAT+CGG + chr6.1:68414736-68414755 None:intergenic 20.0%
!! TATTAGCAAAATATCAAGAA+TGG - chr6.1:68416233-68416252 MS.gene42469:CDS 20.0%
!! TCTAGAAAATTACTAAGATT+TGG + chr6.1:68417858-68417877 None:intergenic 20.0%
!! TTTATCAATTTCTATCATGA+AGG - chr6.1:68417467-68417486 MS.gene42469:CDS 20.0%
!!! AATTTTTCAATTGAAACAAG+CGG + chr6.1:68414624-68414643 None:intergenic 20.0%
! AGTGTCAACAATAAAAGATA+TGG - chr6.1:68417231-68417250 MS.gene42469:CDS 25.0%
! ATTAGCATCGTATTTAACAA+GGG - chr6.1:68416895-68416914 MS.gene42469:CDS 25.0%
! ATTTATGACTTCTCTTGATA+TGG - chr6.1:68417440-68417459 MS.gene42469:CDS 25.0%
! CTATAACAAACAATATTCCA+CGG + chr6.1:68415743-68415762 None:intergenic 25.0%
! GCTTGTTTCAATTGAAAAAT+TGG - chr6.1:68414623-68414642 MS.gene42469:intron 25.0%
! TTAACATTGGAGAAAATTGT+AGG + chr6.1:68417171-68417190 None:intergenic 25.0%
! TTAGATAGAGTATATACTTC+TGG + chr6.1:68416411-68416430 None:intergenic 25.0%
! TTTCAATTGAAAAATTGGAG+AGG - chr6.1:68414628-68414647 MS.gene42469:intron 25.0%
!! TACAATTTTCTCCAATGTTA+AGG - chr6.1:68417170-68417189 MS.gene42469:CDS 25.0%
!!! AAACTTGTTCTTTTCTATCT+AGG - chr6.1:68418088-68418107 MS.gene42469:CDS 25.0%
!!! ACATCTATTTTTATGCTCAA+TGG + chr6.1:68415806-68415825 None:intergenic 25.0%
!!! ATGTAGAAGAATTTTTGGAT+TGG - chr6.1:68414382-68414401 MS.gene42469:CDS 25.0%
!!! TGGAATATTGTTTGTTATAG+AGG - chr6.1:68415743-68415762 MS.gene42469:CDS 25.0%
!!! TGTAGAAGAATTTTTGGATT+GGG - chr6.1:68414383-68414402 MS.gene42469:CDS 25.0%
!!! TTCAACATACTTGTTATCAA+TGG - chr6.1:68414746-68414765 MS.gene42469:intron 25.0%
!!! TTTTATTTTATTTTGGCCCA+CGG - chr6.1:68417897-68417916 MS.gene42469:CDS 25.0%
AAAAACTCCAGTTTCATTGA+AGG + chr6.1:68415335-68415354 None:intergenic 30.0%
AACATCTAACCTGTTAACTT+TGG - chr6.1:68416201-68416220 MS.gene42469:CDS 30.0%
AGTAACTGTGACAAAGAATT+TGG - chr6.1:68417263-68417282 MS.gene42469:CDS 30.0%
AGTTTCTACAAGAATGAAGT+TGG - chr6.1:68416109-68416128 MS.gene42469:CDS 30.0%
CAACTAAGAAGAACAAAGAT+AGG - chr6.1:68415987-68416006 MS.gene42469:CDS 30.0%
CATTAGCATCGTATTTAACA+AGG - chr6.1:68416894-68416913 MS.gene42469:CDS 30.0%
CGACAAACCTATCAAAATAA+GGG + chr6.1:68418034-68418053 None:intergenic 30.0%
CTACTTTACTTGAAAACAGA+AGG - chr6.1:68416548-68416567 MS.gene42469:CDS 30.0%
CTGAAACTAAAACTCCTTAT+TGG - chr6.1:68417520-68417539 MS.gene42469:CDS 30.0%
GAAAAGAGGGTAAATCAATT+AGG - chr6.1:68416304-68416323 MS.gene42469:CDS 30.0%
GAATGTTGAAAATCTGACAT+GGG - chr6.1:68416366-68416385 MS.gene42469:CDS 30.0%
GATACTTAATGATCATTGCT+TGG - chr6.1:68414953-68414972 MS.gene42469:intron 30.0%
TAGAACTTATGTAGCTTAAG+AGG - chr6.1:68417946-68417965 MS.gene42469:CDS 30.0%
TAGAGAAGCAATTGAAAAGA+GGG - chr6.1:68416291-68416310 MS.gene42469:CDS 30.0%
TCCAACTACACTTCTTAAAT+AGG + chr6.1:68416503-68416522 None:intergenic 30.0%
TCGACAGGTAGTAAAAAAAT+TGG - chr6.1:68417123-68417142 MS.gene42469:CDS 30.0%
TCTAAAAAGAGTTAGTTGTG+TGG - chr6.1:68416426-68416445 MS.gene42469:CDS 30.0%
TCTAATCGTTGAAGAATAGA+CGG + chr6.1:68417498-68417517 None:intergenic 30.0%
TGAATGTTGAAAATCTGACA+TGG - chr6.1:68416365-68416384 MS.gene42469:CDS 30.0%
TGAATTTGAGAAGAAGTTAG+TGG - chr6.1:68416969-68416988 MS.gene42469:CDS 30.0%
TGATTGTTTGAAAGAAGAGA+AGG - chr6.1:68415484-68415503 MS.gene42469:CDS 30.0%
TTATATATCCGATTCAGTTG+AGG - chr6.1:68415091-68415110 MS.gene42469:CDS 30.0%
TTCAACAAGACGTGAAATAA+TGG - chr6.1:68416762-68416781 MS.gene42469:CDS 30.0%
TTGACAAATAGCTAAATCCA+GGG + chr6.1:68415970-68415989 None:intergenic 30.0%
TTGTACATCATGAATTGAAC+CGG + chr6.1:68415312-68415331 None:intergenic 30.0%
TTGTTGATCAAGTATACACA+TGG - chr6.1:68417415-68417434 MS.gene42469:CDS 30.0%
TTTCTGCAGATGTTATATCA+AGG - chr6.1:68415846-68415865 MS.gene42469:CDS 30.0%
TTTGATCCTAAAGTTCAACA+AGG - chr6.1:68417024-68417043 MS.gene42469:CDS 30.0%
TTTGGAAATGACATTCTCTA+TGG - chr6.1:68417351-68417370 MS.gene42469:CDS 30.0%
! AATTTTCTCCAATGTTAAGG+AGG - chr6.1:68417173-68417192 MS.gene42469:CDS 30.0%
! ATAGAGAATGTCATTTCCAA+AGG + chr6.1:68417352-68417371 None:intergenic 30.0%
! ATTGAAGCAGAAGCTTTTAA+TGG - chr6.1:68415212-68415231 MS.gene42469:CDS 30.0%
! ATTGAAGGCTGATTTAATTG+CGG - chr6.1:68415769-68415788 MS.gene42469:CDS 30.0%
! ATTTTCTTTAACACTCCTCT+TGG + chr6.1:68416062-68416081 None:intergenic 30.0%
! CAAAATAATGGGAAGCATAT+TGG - chr6.1:68414831-68414850 MS.gene42469:intron 30.0%
! TATTTAAGAAGTGTAGTTGG+AGG - chr6.1:68416502-68416521 MS.gene42469:CDS 30.0%
! TCCTATTTAAGAAGTGTAGT+TGG - chr6.1:68416499-68416518 MS.gene42469:CDS 30.0%
! TTGTTATAGAGGTGTATTGA+AGG - chr6.1:68415754-68415773 MS.gene42469:CDS 30.0%
!! AAATCAATTAGGCATTGACA+AGG - chr6.1:68416315-68416334 MS.gene42469:CDS 30.0%
!! ATTAATTGCTACTTTGCCTT+TGG - chr6.1:68417333-68417352 MS.gene42469:CDS 30.0%
!! CGAATTTGTTTGTTGATTTG+CGG + chr6.1:68415522-68415541 None:intergenic 30.0%
!! TGTTGAACTTTAGGATCAAA+AGG + chr6.1:68417024-68417043 None:intergenic 30.0%
!!! GATGACTTGTCATTGATTTT+TGG - chr6.1:68415569-68415588 MS.gene42469:CDS 30.0%
!!! TTTATTTTATTTTGGCCCAC+GGG - chr6.1:68417898-68417917 MS.gene42469:CDS 30.0%
AAAAGTTCGAGATTTCGACA+AGG + chr6.1:68415404-68415423 None:intergenic 35.0%
AAACCAGCTTCACTTGAATT+AGG - chr6.1:68416808-68416827 MS.gene42469:CDS 35.0%
AAATCTCCTTAATAGCAGCA+CGG + chr6.1:68416645-68416664 None:intergenic 35.0%
AACAAGTCTGATCAATCGAA+AGG - chr6.1:68415133-68415152 MS.gene42469:CDS 35.0%
AAGACACGTGAAGAAATTGA+TGG - chr6.1:68416262-68416281 MS.gene42469:CDS 35.0%
AATAGCTAAATCCAGGGATA+TGG + chr6.1:68415964-68415983 None:intergenic 35.0%
ACAAGTCTGATCAATCGAAA+GGG - chr6.1:68415134-68415153 MS.gene42469:CDS 35.0%
ACCTATCAAAATAAGGGTTC+CGG + chr6.1:68418028-68418047 None:intergenic 35.0%
AGACACGTGAAGAAATTGAT+GGG - chr6.1:68416263-68416282 MS.gene42469:CDS 35.0%
AGCGACAAACTTGTGAAAAT+AGG + chr6.1:68418065-68418084 None:intergenic 35.0%
AGTGAAATGTAAGTGCTTGA+CGG + chr6.1:68417679-68417698 None:intergenic 35.0%
AGTTGTGTGGAAAACAAACA+AGG - chr6.1:68416439-68416458 MS.gene42469:CDS 35.0%
ATAACATCTGCAGAAAGATC+AGG + chr6.1:68415842-68415861 None:intergenic 35.0%
ATGACTTCTCTTGATATGGA+AGG - chr6.1:68417444-68417463 MS.gene42469:CDS 35.0%
ATTCCTTGAGTTCAATGTGA+CGG + chr6.1:68417596-68417615 None:intergenic 35.0%
ATTCCTTGCTGAAGTTGTAT+AGG + chr6.1:68415263-68415282 None:intergenic 35.0%
CAAATAGATGAACTGAATGC+CGG - chr6.1:68415290-68415309 MS.gene42469:CDS 35.0%
CAAGGAATTGCATGTAGATT+TGG - chr6.1:68417608-68417627 MS.gene42469:CDS 35.0%
CATGAAAGATTTAACTCTCG+CGG - chr6.1:68414582-68414601 MS.gene42469:intron 35.0%
CTAAGAAGAACAAAGATAGG+TGG - chr6.1:68415990-68416009 MS.gene42469:CDS 35.0%
CTAGAGAAGCAATTGAAAAG+AGG - chr6.1:68416290-68416309 MS.gene42469:CDS 35.0%
GAAAGAAATAACAAACCCGT+GGG + chr6.1:68417916-68417935 None:intergenic 35.0%
GAATGTAAAACCTACTTTGC+TGG - chr6.1:68416169-68416188 MS.gene42469:CDS 35.0%
GATTTCGTTAAAGACCATAC+CGG - chr6.1:68416660-68416679 MS.gene42469:CDS 35.0%
GCGACAAACCTATCAAAATA+AGG + chr6.1:68418035-68418054 None:intergenic 35.0%
GCGACAAACTTGTGAAAATA+GGG + chr6.1:68418064-68418083 None:intergenic 35.0%
GGAAAACAAACAAGGTCATA+TGG - chr6.1:68416447-68416466 MS.gene42469:CDS 35.0%
GGAGTCTATATTCTGATCAA+AGG - chr6.1:68417640-68417659 MS.gene42469:CDS 35.0%
GGTTATGATCCTACACTTTA+TGG - chr6.1:68414999-68415018 MS.gene42469:CDS 35.0%
GTTGACAAATAGCTAAATCC+AGG + chr6.1:68415971-68415990 None:intergenic 35.0%
GTTGCTCCTTGCAAAATAAT+GGG - chr6.1:68414820-68414839 MS.gene42469:intron 35.0%
TAAAGTGTAGGATCATAACC+AGG + chr6.1:68414999-68415018 None:intergenic 35.0%
TATCAGATGATGCATATGCT+TGG - chr6.1:68415063-68415082 MS.gene42469:CDS 35.0%
TGAAAGAAATAACAAACCCG+TGG + chr6.1:68417917-68417936 None:intergenic 35.0%
TGAAAGTTCAGACTGTGATT+GGG - chr6.1:68415157-68415176 MS.gene42469:CDS 35.0%
TGCATCTGAACTACTAGTTA+AGG + chr6.1:68416479-68416498 None:intergenic 35.0%
TGTACAACCTTCAATGAAAC+TGG - chr6.1:68415325-68415344 MS.gene42469:CDS 35.0%
TTCAAACAATCATCGTTGTC+TGG + chr6.1:68415476-68415495 None:intergenic 35.0%
TTCTACAAGAATGAAGTTGG+TGG - chr6.1:68416112-68416131 MS.gene42469:CDS 35.0%
TTTCGTGTGTTTGTTCAAGA+AGG - chr6.1:68416937-68416956 MS.gene42469:CDS 35.0%
! AGAGTATATACTTCTGGAGA+CGG + chr6.1:68416405-68416424 None:intergenic 35.0%
! ATGTAGATTTGGTTCACTTC+AGG - chr6.1:68417619-68417638 MS.gene42469:CDS 35.0%
! ATTTTGTATGTGACGCAGTA+CGG + chr6.1:68418139-68418158 None:intergenic 35.0%
! CGAGATTTTCTCTCAATTTC+TGG - chr6.1:68417996-68418015 MS.gene42469:CDS 35.0%
! CTTCTTTTTCCGTGAAAATG+AGG + chr6.1:68418198-68418217 None:intergenic 35.0%
! GTCGAAATCTCGAACTTTTT+GGG - chr6.1:68415405-68415424 MS.gene42469:CDS 35.0%
! TATTAACCGTGCTGCTATTA+AGG - chr6.1:68416636-68416655 MS.gene42469:CDS 35.0%
! TGATGAGGATAACTCACTTT+TGG - chr6.1:68415022-68415041 MS.gene42469:CDS 35.0%
! TGTATCTTTTCCAGCAAAGT+AGG + chr6.1:68416182-68416201 None:intergenic 35.0%
! TGTCGAAATCTCGAACTTTT+TGG - chr6.1:68415404-68415423 MS.gene42469:CDS 35.0%
!! ATGCTTCCCATTATTTTGCA+AGG + chr6.1:68414829-68414848 None:intergenic 35.0%
!! GATTTTCTCTCAATTTCTGG+TGG - chr6.1:68417999-68418018 MS.gene42469:CDS 35.0%
!!! AACTCACTTTTGGAATTGTC+TGG - chr6.1:68415032-68415051 MS.gene42469:CDS 35.0%
!!! TTTAGCAGCAGTTTTGAAGA+GGG - chr6.1:68415875-68415894 MS.gene42469:CDS 35.0%
!!! TTTTAGCAGCAGTTTTGAAG+AGG - chr6.1:68415874-68415893 MS.gene42469:CDS 35.0%
AAACAATCATCGTTGTCTGG+TGG + chr6.1:68415473-68415492 None:intergenic 40.0%
AACAATCATCGTTGTCTGGT+GGG + chr6.1:68415472-68415491 None:intergenic 40.0%
AAGGGAGAAATTTGTGTTGC+GGG - chr6.1:68416913-68416932 MS.gene42469:CDS 40.0%
ATCCTTCTCCAAGTTCGAAT+AGG + chr6.1:68414549-68414568 None:intergenic 40.0%
ATCTTAACCTGCTTGCTTTC+CGG + chr6.1:68414447-68414466 None:intergenic 40.0%
ATGGAGGTTACAAGATGAGT+TGG - chr6.1:68417370-68417389 MS.gene42469:CDS 40.0%
ATTGAAGGAGTCAACATGCA+TGG - chr6.1:68417730-68417749 MS.gene42469:CDS 40.0%
CAAACCGAGAACGATGTAAT+TGG - chr6.1:68414798-68414817 MS.gene42469:intron 40.0%
CAAGGGAGAAATTTGTGTTG+CGG - chr6.1:68416912-68416931 MS.gene42469:CDS 40.0%
CCAAATAACTCCTGTTCGAA+TGG + chr6.1:68417313-68417332 None:intergenic 40.0%
CCATTCGAACAGGAGTTATT+TGG - chr6.1:68417310-68417329 MS.gene42469:CDS 40.0%
GAAAGAACCCTATTCGAACT+TGG - chr6.1:68414538-68414557 MS.gene42469:intron 40.0%
GATGATGCATATGCTTGGAA+AGG - chr6.1:68415068-68415087 MS.gene42469:CDS 40.0%
GCAAACTGATTGAAACCAAG+AGG - chr6.1:68416044-68416063 MS.gene42469:CDS 40.0%
GCAACCAATTACATCGTTCT+CGG + chr6.1:68414805-68414824 None:intergenic 40.0%
GCACGGTTAATAGATTCTCT+TGG + chr6.1:68416628-68416647 None:intergenic 40.0%
GGAAATGACATTCTCTATGG+AGG - chr6.1:68417354-68417373 MS.gene42469:CDS 40.0%
GGAAGATAAGTGTTTGTTCC+AGG + chr6.1:68416607-68416626 None:intergenic 40.0%
GGTTGCTCCTTGCAAAATAA+TGG - chr6.1:68414819-68414838 MS.gene42469:intron 40.0%
GTGAAAGTTCAGACTGTGAT+TGG - chr6.1:68415156-68415175 MS.gene42469:CDS 40.0%
GTGAAATGTAAGTGCTTGAC+GGG + chr6.1:68417678-68417697 None:intergenic 40.0%
GTTTGGAAGAGATTGTGGAT+TGG - chr6.1:68417392-68417411 MS.gene42469:CDS 40.0%
TAAAGAATGTGTCGCAACCA+AGG - chr6.1:68415358-68415377 MS.gene42469:CDS 40.0%
TAAAGTTCAACAAGGTCCTC+AGG - chr6.1:68417032-68417051 MS.gene42469:CDS 40.0%
TCAGATAATTGTGGTAGTCC+TGG - chr6.1:68414978-68414997 MS.gene42469:intron 40.0%
TCCTCATCACCATAAAGTGT+AGG + chr6.1:68415011-68415030 None:intergenic 40.0%
TCCTTCTCCAAGTTCGAATA+GGG + chr6.1:68414548-68414567 None:intergenic 40.0%
TCTCCTATACAACTTCAGCA+AGG - chr6.1:68415257-68415276 MS.gene42469:CDS 40.0%
TGAAAATCTGACATGGGAGA+AGG - chr6.1:68416372-68416391 MS.gene42469:CDS 40.0%
TGAAGTGGATGACAAAAGAG+AGG - chr6.1:68414893-68414912 MS.gene42469:intron 40.0%
TGAGGACCTTGTTGAACTTT+AGG + chr6.1:68417033-68417052 None:intergenic 40.0%
TGCTTGGCATCAGATAATTG+TGG - chr6.1:68414969-68414988 MS.gene42469:intron 40.0%
TGGTGTAGATTTGCATCATG+AGG - chr6.1:68414851-68414870 MS.gene42469:intron 40.0%
TGGTTGCGACACATTCTTTA+GGG + chr6.1:68415358-68415377 None:intergenic 40.0%
TGTTCGAATGGACCTTGATA+CGG + chr6.1:68417301-68417320 None:intergenic 40.0%
TTACCAGTCATCTGAATTCG+AGG - chr6.1:68415595-68415614 MS.gene42469:CDS 40.0%
TTCGATGTAGTACCTGGATT+TGG - chr6.1:68416703-68416722 MS.gene42469:CDS 40.0%
TTGAAGGAGTCAACATGCAT+GGG - chr6.1:68417731-68417750 MS.gene42469:CDS 40.0%
TTGGTTGCGACACATTCTTT+AGG + chr6.1:68415359-68415378 None:intergenic 40.0%
! AAAACTCCTTATTGGCCTGT+TGG - chr6.1:68417528-68417547 MS.gene42469:CDS 40.0%
! ACAGAAGGTGCAATGGTATT+TGG - chr6.1:68416563-68416582 MS.gene42469:CDS 40.0%
! AGCAGAAGCTTTTAATGGTC+TGG - chr6.1:68415217-68415236 MS.gene42469:CDS 40.0%
! ATATAGCAAGCACCGTATCA+AGG - chr6.1:68417286-68417305 MS.gene42469:CDS 40.0%
! CATCTTTTCTCACAAGCAGT+TGG - chr6.1:68415932-68415951 MS.gene42469:CDS 40.0%
! CTTGAAAACAGAAGGTGCAA+TGG - chr6.1:68416556-68416575 MS.gene42469:CDS 40.0%
! TCCTACACTTTATGGTGATG+AGG - chr6.1:68415007-68415026 MS.gene42469:CDS 40.0%
!! ACTGGTAAGGTTAGCTTTAC+TGG - chr6.1:68416739-68416758 MS.gene42469:CDS 40.0%
!! AGTTGGTTTGGAAGAGATTG+TGG - chr6.1:68417387-68417406 MS.gene42469:CDS 40.0%
!! GAAGAAGTGCCAAAGTTAAC+AGG + chr6.1:68416213-68416232 None:intergenic 40.0%
!! GGTTACAAGATGAGTTGGTT+TGG - chr6.1:68417375-68417394 MS.gene42469:CDS 40.0%
!! TCTCAATTTCTGGTGGATTC+CGG - chr6.1:68418006-68418025 MS.gene42469:CDS 40.0%
!! TGAAAAGTACCGCATCTGTT+TGG - chr6.1:68414481-68414500 MS.gene42469:intron 40.0%
!!! ACTTTTTGGGACAGATCCAT+CGG - chr6.1:68415418-68415437 MS.gene42469:CDS 40.0%
!!! TCCGGAACCCTTATTTTGAT+AGG - chr6.1:68418024-68418043 MS.gene42469:CDS 40.0%
AAATCTGACATGGGAGAAGG+CGG - chr6.1:68416375-68416394 MS.gene42469:CDS 45.0%
AAATGTAAGTGCTTGACGGG+TGG + chr6.1:68417675-68417694 None:intergenic 45.0%
AATTGCCTCTTGTCAACCTG+AGG + chr6.1:68417051-68417070 None:intergenic 45.0%
ACCCTATTCGAACTTGGAGA+AGG - chr6.1:68414544-68414563 MS.gene42469:intron 45.0%
ACTAGGAAGGAAATCGACGA+CGG + chr6.1:68415677-68415696 None:intergenic 45.0%
AGTGGACAAAGCAAGAGCTT+GGG - chr6.1:68416987-68417006 MS.gene42469:CDS 45.0%
AGTTCAGACTGTGATTGGGA+TGG - chr6.1:68415161-68415180 MS.gene42469:CDS 45.0%
ATGTATCAACCGCCAGTGAA+GGG - chr6.1:68414672-68414691 MS.gene42469:intron 45.0%
CAACCGTCACATTGAACTCA+AGG - chr6.1:68417590-68417609 MS.gene42469:CDS 45.0%
CAACTCAGCCTCAACTGAAT+CGG + chr6.1:68415102-68415121 None:intergenic 45.0%
CATCTGCAGAAAGATCAGGA+AGG + chr6.1:68415838-68415857 None:intergenic 45.0%
CATGCGTACAACACAACTTG+AGG - chr6.1:68417197-68417216 MS.gene42469:CDS 45.0%
CATTTCACTCAATGCGATCC+AGG - chr6.1:68417690-68417709 MS.gene42469:CDS 45.0%
CCAGCTTCACTTGAATTAGG+AGG - chr6.1:68416811-68416830 MS.gene42469:CDS 45.0%
CCTCCTAATTCAAGTGAAGC+TGG + chr6.1:68416814-68416833 None:intergenic 45.0%
CGATTACCACTAACTCCAAC+AGG + chr6.1:68417546-68417565 None:intergenic 45.0%
CTAACTCCAACAGGCCAATA+AGG + chr6.1:68417537-68417556 None:intergenic 45.0%
CTTCCTCGAATTCAGATGAC+TGG + chr6.1:68415601-68415620 None:intergenic 45.0%
GAAGGGTGGATATACTGAAG+AGG - chr6.1:68414689-68414708 MS.gene42469:intron 45.0%
GAGGCTGAGTTGCATATTCA+AGG - chr6.1:68415110-68415129 MS.gene42469:CDS 45.0%
GATGTAGCAACTCTTTCGAC+AGG - chr6.1:68417108-68417127 MS.gene42469:CDS 45.0%
GGTGGTCTCTTGTTCATTGA+AGG - chr6.1:68417715-68417734 MS.gene42469:CDS 45.0%
GTATCAAGGTCCATTCGAAC+AGG - chr6.1:68417300-68417319 MS.gene42469:CDS 45.0%
TCAAGCACAATGCAACTACC+TGG - chr6.1:68416586-68416605 MS.gene42469:CDS 45.0%
TCAATGTGACGGTTGTGATG+CGG + chr6.1:68417585-68417604 None:intergenic 45.0%
TCAGTATATCCACCCTTCAC+TGG + chr6.1:68414687-68414706 None:intergenic 45.0%
TCTATCCCTCCAAACAGATG+CGG + chr6.1:68414493-68414512 None:intergenic 45.0%
TCTTAACCTGCTTGCTTTCC+GGG + chr6.1:68414446-68414465 None:intergenic 45.0%
TGGAGAAGATAGACTACAGC+TGG - chr6.1:68416132-68416151 MS.gene42469:CDS 45.0%
TGGTCTGGTGCAAAAACCAT+CGG - chr6.1:68415232-68415251 MS.gene42469:CDS 45.0%
! AAGTACCGCATCTGTTTGGA+GGG - chr6.1:68414485-68414504 MS.gene42469:intron 45.0%
! AATGTAAGTGCTTGACGGGT+GGG + chr6.1:68417674-68417693 None:intergenic 45.0%
! ACTCCATCTGAAATTCCAGC+CGG + chr6.1:68416682-68416701 None:intergenic 45.0%
! ATACCGGCTGGAATTTCAGA+TGG - chr6.1:68416676-68416695 MS.gene42469:CDS 45.0%
! ATCTGAAATTCCAGCCGGTA+TGG + chr6.1:68416677-68416696 None:intergenic 45.0%
! CTCAAGTTGTGTTGTACGCA+TGG + chr6.1:68417199-68417218 None:intergenic 45.0%
! GGAGTATTCGATGTAGTACC+TGG - chr6.1:68416697-68416716 MS.gene42469:CDS 45.0%
! GTCGATTTCCTTCCTAGTGA+TGG - chr6.1:68415679-68415698 MS.gene42469:CDS 45.0%
! GTGAAAATGAGGTACCTCTG+CGG + chr6.1:68418187-68418206 None:intergenic 45.0%
! TAGTGGACAAAGCAAGAGCT+TGG - chr6.1:68416986-68417005 MS.gene42469:CDS 45.0%
! TATATACTTCTGGAGACGGC+TGG + chr6.1:68416401-68416420 None:intergenic 45.0%
! TATTGGCCTGTTGGAGTTAG+TGG - chr6.1:68417537-68417556 MS.gene42469:CDS 45.0%
! TCTGAATTCGAGGAAGTGCA+AGG - chr6.1:68415605-68415624 MS.gene42469:CDS 45.0%
! TGAAAATGAGGTACCTCTGC+GGG + chr6.1:68418186-68418205 None:intergenic 45.0%
!! AAAGTACCGCATCTGTTTGG+AGG - chr6.1:68414484-68414503 MS.gene42469:intron 45.0%
!! TGTTGATTTGCGGTAGCAAG+TGG + chr6.1:68415512-68415531 None:intergenic 45.0%
!!! GCAGAGGTACCTCATTTTCA+CGG - chr6.1:68418186-68418205 MS.gene42469:CDS 45.0%
AAAGCAAGAGCTTGGGCTGT+TGG - chr6.1:68416994-68417013 MS.gene42469:CDS 50.0%
ACAATATTCCACGGCACCCA+TGG + chr6.1:68415734-68415753 None:intergenic 50.0%
ACCTCTGCGGGCAACTTAAA+AGG + chr6.1:68418174-68418193 None:intergenic 50.0%
ACGCATGGCCTCCTTAACAT+TGG + chr6.1:68417184-68417203 None:intergenic 50.0%
AGAATGTGTCGCAACCAAGG+AGG - chr6.1:68415361-68415380 MS.gene42469:CDS 50.0%
AGTTGTATAGGAGAGCCCGA+TGG + chr6.1:68415251-68415270 None:intergenic 50.0%
ATCGAGTTCTTCAGAGGTGG+AGG - chr6.1:68417782-68417801 MS.gene42469:CDS 50.0%
CACGGAAAAAGAAGAAGCCG+AGG - chr6.1:68418204-68418223 MS.gene42469:CDS 50.0%
CTCGAGATCGAGTTCTTCAG+AGG - chr6.1:68417776-68417795 MS.gene42469:CDS 50.0%
GAGATCGAGTTCTTCAGAGG+TGG - chr6.1:68417779-68417798 MS.gene42469:CDS 50.0%
GATGTATCAACCGCCAGTGA+AGG - chr6.1:68414671-68414690 MS.gene42469:intron 50.0%
GGCAAACTTAGCGAAACTGC+AGG + chr6.1:68415656-68415675 None:intergenic 50.0%
GGGTGGATATACTGAAGAGG+CGG - chr6.1:68414692-68414711 MS.gene42469:intron 50.0%
GGTCTGGTGCAAAAACCATC+GGG - chr6.1:68415233-68415252 MS.gene42469:CDS 50.0%
GTATATCCACCCTTCACTGG+CGG + chr6.1:68414684-68414703 None:intergenic 50.0%
TCACTCAATGCGATCCAGGA+GGG - chr6.1:68417694-68417713 MS.gene42469:CDS 50.0%
TCGTTAAAGACCATACCGGC+TGG - chr6.1:68416664-68416683 MS.gene42469:CDS 50.0%
TGAGGCTAGTGACTGTGTTC+TGG - chr6.1:68414869-68414888 MS.gene42469:intron 50.0%
TGCAACTGCAGGAACTGGTA+AGG - chr6.1:68416726-68416745 MS.gene42469:CDS 50.0%
TGGACACTCCATCACTAGGA+AGG + chr6.1:68415690-68415709 None:intergenic 50.0%
TTCACTCAATGCGATCCAGG+AGG - chr6.1:68417693-68417712 MS.gene42469:CDS 50.0%
TTCTTCTGCTGCTACCTCCT+TGG + chr6.1:68415378-68415397 None:intergenic 50.0%
TTTCGACGTCATAGACGTCC+CGG - chr6.1:68414425-68414444 MS.gene42469:intron 50.0%
! ATGTAAGTGCTTGACGGGTG+GGG + chr6.1:68417673-68417692 None:intergenic 50.0%
! CTAGTGATGGAGTGTCCATC+CGG - chr6.1:68415692-68415711 MS.gene42469:CDS 50.0%
! TGACTGTGTTCTGGCTGAAG+TGG - chr6.1:68414878-68414897 MS.gene42469:intron 50.0%
! TTTGGTGCAACTGCAGGAAC+TGG - chr6.1:68416721-68416740 MS.gene42469:CDS 50.0%
!! AAGGTCCTCAGGTTGACAAG+AGG - chr6.1:68417043-68417062 MS.gene42469:CDS 50.0%
!! GTTGGAAGTGTCCATATCCC+TGG - chr6.1:68415950-68415969 MS.gene42469:CDS 50.0%
!!! ACCTTTTAAGTTGCCCGCAG+AGG - chr6.1:68418170-68418189 MS.gene42469:CDS 50.0%
ATGTGACGGTTGTGATGCGG+CGG + chr6.1:68417582-68417601 None:intergenic 55.0%
CCTGCAGTTGCACCAAATCC+AGG + chr6.1:68416718-68416737 None:intergenic 55.0%
CGGATGGACACTCCATCACT+AGG + chr6.1:68415694-68415713 None:intergenic 55.0%
TATCAACCGCCAGTGAAGGG+TGG - chr6.1:68414675-68414694 MS.gene42469:intron 55.0%
TGAACAAGAGACCACCCTCC+TGG + chr6.1:68417711-68417730 None:intergenic 55.0%
TGGAGGAGACTGATGCAGGA+GGG - chr6.1:68417799-68417818 MS.gene42469:CDS 55.0%
! ACTGGCGGTTGATACATCCG+TGG + chr6.1:68414669-68414688 None:intergenic 55.0%
! TCATCGTTGTCTGGTGGGTC+TGG + chr6.1:68415467-68415486 None:intergenic 55.0%
! TGACGCAGTACGGAAGCGTA+GGG + chr6.1:68418129-68418148 None:intergenic 55.0%
! TTGTGATGCGGCGGTTTTGC+TGG + chr6.1:68417573-68417592 None:intergenic 55.0%
!! CCTGGATTTGGTGCAACTGC+AGG - chr6.1:68416715-68416734 MS.gene42469:CDS 55.0%
AGACGTCCCGGAAAGCAAGC+AGG - chr6.1:68414437-68414456 MS.gene42469:intron 60.0%
CCAGGCTTCTTGCTGGCCAT+GGG - chr6.1:68415715-68415734 MS.gene42469:CDS 60.0%
CTCAATGCGATCCAGGAGGG+TGG - chr6.1:68417697-68417716 MS.gene42469:CDS 60.0%
GAGGTGGAGGAGACTGATGC+AGG - chr6.1:68417795-68417814 MS.gene42469:CDS 60.0%
GGAAGCAACTCTCGTCGCCA+CGG - chr6.1:68414649-68414668 MS.gene42469:intron 60.0%
GGAGAGGGAACTGAGTCCGA+TGG + chr6.1:68415437-68415456 None:intergenic 60.0%
GTGGAGGAGACTGATGCAGG+AGG - chr6.1:68417798-68417817 MS.gene42469:CDS 60.0%
! GTGACGCAGTACGGAAGCGT+AGG + chr6.1:68418130-68418149 None:intergenic 60.0%
! TCGTTGTCTGGTGGGTCTGG+TGG + chr6.1:68415464-68415483 None:intergenic 60.0%
! TGATGCGGCGGTTTTGCTGG+CGG + chr6.1:68417570-68417589 None:intergenic 60.0%
! TTGTCTGGTGGGTCTGGTGG+TGG + chr6.1:68415461-68415480 None:intergenic 60.0%
CAGCAAGAAGCCTGGCCGGA+TGG + chr6.1:68415710-68415729 None:intergenic 65.0%
CATCCGGCCAGGCTTCTTGC+TGG - chr6.1:68415708-68415727 MS.gene42469:CDS 65.0%
CCCATGGCCAGCAAGAAGCC+TGG + chr6.1:68415718-68415737 None:intergenic 65.0%
GCCAGGCTTCTTGCTGGCCA+TGG - chr6.1:68415714-68415733 MS.gene42469:CDS 65.0%
TGGCCAGCAAGAAGCCTGGC+CGG + chr6.1:68415714-68415733 None:intergenic 65.0%
! GATGGAGTGTCCATCCGGCC+AGG - chr6.1:68415697-68415716 MS.gene42469:CDS 65.0%
!! TCTGGTGGGTCTGGTGGTGG+CGG + chr6.1:68415458-68415477 None:intergenic 65.0%
! CTTGCTGGCCATGGGTGCCG+TGG - chr6.1:68415723-68415742 MS.gene42469:CDS 70.0%
!! GGGTCTGGTGGTGGCGGAGA+GGG + chr6.1:68415452-68415471 None:intergenic 70.0%
!! TGGGTCTGGTGGTGGCGGAG+AGG + chr6.1:68415453-68415472 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 68414378 68418234 68414378 ID=MS.gene42469
chr6.1 mRNA 68414378 68418234 68414378 ID=MS.gene42469.t1;Parent=MS.gene42469
chr6.1 exon 68414992 68418234 68414992 ID=MS.gene42469.t1.exon1;Parent=MS.gene42469.t1
chr6.1 CDS 68414992 68418234 68414992 ID=cds.MS.gene42469.t1;Parent=MS.gene42469.t1
chr6.1 exon 68414378 68414422 68414378 ID=MS.gene42469.t1.exon2;Parent=MS.gene42469.t1
chr6.1 CDS 68414378 68414422 68414378 ID=cds.MS.gene42469.t1;Parent=MS.gene42469.t1
Gene Sequence

>MS.gene42469

ATGGATGTAGAAGAATTTTTGGATTGGGTGATTGATGTTGATAGATTTTTCGACGTCATAGACGTCCCGGAAAGCAAGCAGGTTAAGATGATTGCGAACAAACTGAAAAGTACCGCATCTGTTTGGAGGGATAGACTCGTTGTTCAGAGACAGAGACAAAGAAAGAACCCTATTCGAACTTGGAGAAGGATGAAGCAGTTGATGCATGAAAGATTTAACTCTCGCGGTAGATTGTCTCTCTCGCCGCTTGTTTCAATTGAAAAATTGGAGAGGAAGCAACTCTCGTCGCCACGGATGTATCAACCGCCAGTGAAGGGTGGATATACTGAAGAGGCGGATCATATCATTAATGAAGCCGATTTTCATAATTCAACATACTTGTTATCAATGGAGACAACACAAAATGAATTATATGCTTATCAAACCGAGAACGATGTAATTGGTTGCTCCTTGCAAAATAATGGGAAGCATATTGGTGTAGATTTGCATCATGAGGCTAGTGACTGTGTTCTGGCTGAAGTGGATGACAAAAGAGAGGAACAAAAGCATTTGAAACGAACAGATCAAGAAAACTTGATACTTAATGATCATTGCTTGGCATCAGATAATTGTGGTAGTCCTGGTTATGATCCTACACTTTATGGTGATGAGGATAACTCACTTTTGGAATTGTCTGGTGAAGTTGTATCAGATGATGCATATGCTTGGAAAGGTTATATATCCGATTCAGTTGAGGCTGAGTTGCATATTCAAGGAACAAGTCTGATCAATCGAAAGGGTGAAAGTTCAGACTGTGATTGGGATGGTATAATTCCCAATTATGCTAATATGTTAATTGAAGCAGAAGCTTTTAATGGTCTGGTGCAAAAACCATCGGGCTCTCCTATACAACTTCAGCAAGGAATTTCTCAACAAATAGATGAACTGAATGCCGGTTCAATTCATGATGTACAACCTTCAATGAAACTGGAGTTTTTCCCTAAAGAATGTGTCGCAACCAAGGAGGTAGCAGCAGAAGAATCACCTTGTCGAAATCTCGAACTTTTTGGGACAGATCCATCGGACTCAGTTCCCTCTCCGCCACCACCAGACCCACCAGACAACGATGATTGTTTGAAAGAAGAGAAGGAACCACTTGCTACCGCAAATCAACAAACAAATTCGAAGAAAGATTCATTCACAACATCTTTTGATGACTTGTCATTGATTTTTGGTGCTTACCAGTCATCTGAATTCGAGGAAGTGCAAGGTAACAATTATCATGACGACAACAATCCTGCAGTTTCGCTAAGTTTGCCGTCGTCGATTTCCTTCCTAGTGATGGAGTGTCCATCCGGCCAGGCTTCTTGCTGGCCATGGGTGCCGTGGAATATTGTTTGTTATAGAGGTGTATTGAAGGCTGATTTAATTGCGGCGCAAATAAGTCCATTGAGCATAAAAATAGATGTGCACAGAGACCTTCCTGATCTTTCTGCAGATGTTATATCAAGGACTGTTTTTAGCAGCAGTTTTGAAGAGGGCAAACATATTTTCAAATTACAAGAGCGACAGATGCATCTTTTCTCACAAGCAGTTGGAAGTGTCCATATCCCTGGATTTAGCTATTTGTCAACTAAGAAGAACAAAGATAGGTGGAGACTAGATAAACAGACACGTGAATCAATTTGCAAACTGATTGAAACCAAGAGGAGTGTTAAAGAAAATACAAAAAATGTACTAAATTCATTAATGAGTTTCTACAAGAATGAAGTTGGTGGAGAAGATAGACTACAGCTGGATGAAATTATTGATGAATGTAAAACCTACTTTGCTGGAAAAGATACAACATCTAACCTGTTAACTTTGGCACTTCTTCTATTAGCAAAATATCAAGAATGGCAAAGTAAGACACGTGAAGAAATTGATGGGAGTACTAGAGAAGCAATTGAAAAGAGGGTAAATCAATTAGGCATTGACAAGGCTGTATCGAAAAAGATTCTTGAACTGATGAATGTTGAAAATCTGACATGGGAGAAGGCGGCCAGCCGTCTCCAGAAGTATATACTCTATCTAAAAAGAGTTAGTTGTGTGGAAAACAAACAAGGTCATATGGCAGCAGCCTTAACTAGTAGTTCAGATGCATCCTATTTAAGAAGTGTAGTTGGAGGACATTTGCATACATTGAATCACTCTACTTTACTTGAAAACAGAAGGTGCAATGGTATTTGGTCAAGCACAATGCAACTACCTGGAACAAACACTTATCTTCCAAGAGAATCTATTAACCGTGCTGCTATTAAGGAGATTTCGTTAAAGACCATACCGGCTGGAATTTCAGATGGAGTATTCGATGTAGTACCTGGATTTGGTGCAACTGCAGGAACTGGTAAGGTTAGCTTTACTGGTTCAACAAGACGTGAAATAATGGTATCTGCAGCTAGAAGTAATTTGAAACCAGCTTCACTTGAATTAGGAGGAAAATCACCCCTCTTAATTTTTTATAATGCTGATGTTGATAAAGCTGCTAAACTTGCTCTCATTAGCATCGTATTTAACAAGGGAGAAATTTGTGTTGCGGGTTTTCGTGTGTTTGTTCAAGAAGGAATCTATGATGAATTTGAGAAGAAGTTAGTGGACAAAGCAAGAGCTTGGGCTGTTGGTGATCCTTTTGATCCTAAAGTTCAACAAGGTCCTCAGGTTGACAAGAGGCAATTTAAAAAAATTATTTCATATATTGAGCATGGAAAGAAAGATGTAGCAACTCTTTCGACAGGTAGTAAAAAAATTGGAGACAAGAGTTACTACAATGAGCCTACAATTTTCTCCAATGTTAAGGAGGCCATGCGTACAACACAACTTGAGGAAGCAATCAAAAGTGTCAACAATAAAAGATATGGCTTAGCAGCAGTAACTGTGACAAAGAATTTGGATATAGCAAGCACCGTATCAAGGTCCATTCGAACAGGAGTTATTTGGATTAATTGCTACTTTGCCTTTGGAAATGACATTCTCTATGGAGGTTACAAGATGAGTTGGTTTGGAAGAGATTGTGGATTGGTTGTTGATCAAGTATACACATGGTCATTTATGACTTCTCTTGATATGGAAGGTTTATCAATTTCTATCATGAAGGCTGATCCGTCTATTCTTCAACGATTAGATGCTGAAACTAAAACTCCTTATTGGCCTGTTGGAGTTAGTGGTAATCGACCGCCAGCAAAACCGCCGCATCACAACCGTCACATTGAACTCAAGGAATTGCATGTAGATTTGGTTCACTTCAGGAGTCTATATTCTGATCAAAGGCAAGACTCCCCACCCGTCAAGCACTTACATTTCACTCAATGCGATCCAGGAGGGTGGTCTCTTGTTCATTGAAGGAGTCAACATGCATGGGAAGCTCTTTATCAGAATGAGAACTCGAGATCGAGTTCTTCAGAGGTGGAGGAGACTGATGCAGGAGGGTTTCTTAGTAATTTAGTAGTATTTATTATTTAGCCAAATCTTAGTAATTTTCTAGAACTTTCTATTATTATTTCGTTTTATTTTATTTTGGCCCACGGGTTTGTTATTTCTTTCACTATATAAGTAGAACTTATGTAGCTTAAGAGGCACACTTTTTTATTCATTAATAATATTCGAGATTTTCTCTCAATTTCTGGTGGATTCCGGAACCCTTATTTTGATAGGTTTGTCGCTTGCAACCCTATTTTCACAAGTTTGTCGCTTGCAAACTTGTTCTTTTCTATCTAGGTTTAGCGCTTGCTAACCCTACGCTTCCGTACTGCGTCACATACAAAATTTGAAAGATTGACCTTTTAAGTTGCCCGCAGAGGTACCTCATTTTCACGGAAAAAGAAGAAGCCGAGGAAAGATAA
Protein sequence

>MS.gene42469.t1

MDVEEFLDWVIDVDRFFDVIDVPESKQVKMIANKLKSTASVWRDRLVVQRQRQRKNPIRTWRRMKQLMHERFNSRGRLSLSPLVSIEKLERKQLSSPRMYQPPVKGGYTEEADHIINEADFHNSTYLLSMETTQNELYAYQTENDVIGCSLQNNGKHIGVDLHHEASDCVLAEVDDKREEQKHLKRTDQENLILNDHCLASDNCGSPGYDPTLYGDEDNSLLELSGEVVSDDAYAWKGYISDSVEAELHIQGTSLINRKGESSDCDWDGIIPNYANMLIEAEAFNGLVQKPSGSPIQLQQGISQQIDELNAGSIHDVQPSMKLEFFPKECVATKEVAAEESPCRNLELFGTDPSDSVPSPPPPDPPDNDDCLKEEKEPLATANQQTNSKKDSFTTSFDDLSLIFGAYQSSEFEEVQGNNYHDDNNPAVSLSLPSSISFLVMECPSGQASCWPWVPWNIVCYRGVLKADLIAAQISPLSIKIDVHRDLPDLSADVISRTVFSSSFEEGKHIFKLQERQMHLFSQAVGSVHIPGFSYLSTKKNKDRWRLDKQTRESICKLIETKRSVKENTKNVLNSLMSFYKNEVGGEDRLQLDEIIDECKTYFAGKDTTSNLLTLALLLLAKYQEWQSKTREEIDGSTREAIEKRVNQLGIDKAVSKKILELMNVENLTWEKAASRLQKYILYLKRVSCVENKQGHMAAALTSSSDASYLRSVVGGHLHTLNHSTLLENRRCNGIWSSTMQLPGTNTYLPRESINRAAIKEISLKTIPAGISDGVFDVVPGFGATAGTGKVSFTGSTRREIMVSAARSNLKPASLELGGKSPLLIFYNADVDKAAKLALISIVFNKGEICVAGFRVFVQEGIYDEFEKKLVDKARAWAVGDPFDPKVQQGPQVDKRQFKKIISYIEHGKKDVATLSTGSKKIGDKSYYNEPTIFSNVKEAMRTTQLEEAIKSVNNKRYGLAAVTVTKNLDIASTVSRSIRTGVIWINCYFAFGNDILYGGYKMSWFGRDCGLVVDQVYTWSFMTSLDMEGLSISIMKADPSILQRLDAETKTPYWPVGVSGNRPPAKPPHHNRHIELKELHRYLIFTEKEEAEER