AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42977

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42977.t1 MTR_8g467490 96.742 399 8 3 1 398 1 395 0.0 790
MS.gene42977.t1 MTR_5g040420 60.648 432 95 12 1 398 1 391 2.31e-162 461
MS.gene42977.t1 MTR_6g011860 49.268 410 177 10 1 398 1 391 1.72e-124 365
MS.gene42977.t1 MTR_5g090970 50.439 228 104 3 9 233 12 233 2.93e-74 234
MS.gene42977.t1 MTR_2g068880 60.753 186 63 6 12 191 19 200 1.75e-73 232
MS.gene42977.t1 MTR_5g090970 50.000 228 104 4 9 233 12 232 6.53e-72 228
MS.gene42977.t1 MTR_2g068920 63.314 169 55 4 12 174 18 185 8.67e-72 227
MS.gene42977.t1 MTR_2g080010 43.111 225 115 3 1 213 1 224 7.14e-61 201
MS.gene42977.t1 MTR_4g089135 52.273 176 70 2 17 178 17 192 3.67e-60 198
MS.gene42977.t1 MTR_4g134460 51.462 171 71 3 13 183 52 210 1.60e-58 197
MS.gene42977.t1 MTR_7g085220 54.217 166 64 4 17 175 10 170 4.02e-58 193
MS.gene42977.t1 MTR_2157s0010 49.000 200 90 5 17 205 10 208 1.19e-57 189
MS.gene42977.t1 MTR_5g041940 54.321 162 67 3 17 178 5 159 2.85e-57 188
MS.gene42977.t1 MTR_8g094580 53.165 158 66 3 17 174 9 158 1.41e-55 185
MS.gene42977.t1 MTR_2g093810 53.797 158 68 2 17 174 16 168 2.23e-55 185
MS.gene42977.t1 MTR_4g036030 44.498 209 99 5 17 222 9 203 2.99e-55 186
MS.gene42977.t1 MTR_3g088110 48.634 183 67 4 17 186 9 177 6.19e-55 183
MS.gene42977.t1 MTR_4g081870 55.000 160 65 3 17 176 11 163 7.15e-55 182
MS.gene42977.t1 MTR_6g012670 40.293 273 130 7 1 258 5 259 8.59e-55 184
MS.gene42977.t1 MTR_2g079990 50.000 182 79 5 17 198 18 187 3.71e-54 183
MS.gene42977.t1 MTR_8g076110 43.878 196 92 5 11 202 2 183 5.10e-54 181
MS.gene42977.t1 MTR_5g012080 49.133 173 74 3 17 186 9 170 7.62e-54 182
MS.gene42977.t1 MTR_4g108760 45.876 194 83 3 17 197 19 203 2.99e-53 181
MS.gene42977.t1 MTR_7g100990 50.595 168 73 4 13 177 8 168 4.54e-53 179
MS.gene42977.t1 MTR_8g059170 52.096 167 70 5 17 183 16 172 5.07e-53 179
MS.gene42977.t1 MTR_3g435150 50.000 176 78 3 1 175 1 167 7.86e-53 178
MS.gene42977.t1 MTR_3g096920 51.266 158 68 3 17 174 9 157 3.05e-52 176
MS.gene42977.t1 MTR_5g021710 45.109 184 83 5 9 187 2 172 4.49e-52 177
MS.gene42977.t1 MTR_4g101680 47.619 168 72 3 17 181 9 163 1.02e-51 177
MS.gene42977.t1 MTR_4g075980 49.143 175 72 4 12 185 12 170 2.27e-51 174
MS.gene42977.t1 MTR_2g064090 50.311 161 68 4 17 175 8 158 6.98e-51 174
MS.gene42977.t1 MTR_6g032770 45.455 176 88 2 12 186 14 182 1.36e-50 174
MS.gene42977.t1 MTR_2g079990 45.588 204 83 6 17 198 18 215 1.45e-50 174
MS.gene42977.t1 MTR_2g078700 50.000 162 70 2 17 176 25 177 5.55e-50 173
MS.gene42977.t1 MTR_3g109340 48.588 177 77 3 1 177 12 174 1.98e-49 171
MS.gene42977.t1 MTR_3g109340 48.588 177 76 3 1 177 12 173 2.08e-49 171
MS.gene42977.t1 MTR_3g096920 55.474 137 57 2 17 153 9 141 3.20e-49 169
MS.gene42977.t1 MTR_6g477900 42.328 189 95 4 17 203 8 184 4.57e-49 166
MS.gene42977.t1 MTR_7g085260 41.589 214 100 4 17 212 19 225 6.37e-49 170
MS.gene42977.t1 MTR_6g084430 46.471 170 78 3 11 180 1 157 6.45e-49 169
MS.gene42977.t1 MTR_4g035590 50.000 164 63 4 17 176 10 158 1.19e-48 169
MS.gene42977.t1 MTR_5g076850 47.205 161 72 3 17 175 8 157 6.61e-48 172
MS.gene42977.t1 MTR_8g024480 46.988 166 77 4 17 176 17 177 7.85e-48 169
MS.gene42977.t1 MTR_3g070030 44.253 174 88 3 12 184 15 180 9.52e-48 166
MS.gene42977.t1 MTR_3g064580 45.078 193 82 6 17 206 8 179 1.74e-47 172
MS.gene42977.t1 MTR_5g069030 50.307 163 68 4 18 178 28 179 1.85e-47 171
MS.gene42977.t1 MTR_2g062730 46.012 163 73 3 17 176 12 162 3.64e-47 164
MS.gene42977.t1 MTR_7g005280 45.604 182 85 3 1 182 1 168 5.18e-47 161
MS.gene42977.t1 MTR_1g096430 46.108 167 74 4 11 174 3 156 9.32e-47 163
MS.gene42977.t1 MTR_1g008740 46.552 174 81 4 3 175 2 164 1.25e-46 163
MS.gene42977.t1 MTR_5g014300 46.707 167 66 4 17 174 8 160 1.56e-46 162
MS.gene42977.t1 MTR_1g008740 46.552 174 81 4 3 175 16 178 2.25e-46 163
MS.gene42977.t1 MTR_3g116070 40.000 240 126 5 9 240 17 246 8.35e-46 161
MS.gene42977.t1 MTR_3g093050 47.273 165 74 4 18 180 25 178 1.26e-45 166
MS.gene42977.t1 MTR_1g069805 36.910 233 122 4 17 246 12 222 1.74e-45 158
MS.gene42977.t1 MTR_3g093050 47.273 165 74 4 18 180 25 178 2.11e-45 166
MS.gene42977.t1 MTR_3g096140 45.122 164 77 4 13 174 5 157 2.32e-45 158
MS.gene42977.t1 MTR_4g098630 46.784 171 79 4 17 184 8 169 2.92e-45 159
MS.gene42977.t1 MTR_7g011130 46.061 165 81 3 18 176 22 184 3.32e-45 159
MS.gene42977.t1 MTR_2g064470 46.784 171 79 5 11 181 7 165 9.83e-45 157
MS.gene42977.t1 MTR_3g096140 45.122 164 77 4 13 174 5 157 1.39e-44 158
MS.gene42977.t1 MTR_7g011120 45.283 159 85 1 18 176 11 167 1.71e-44 156
MS.gene42977.t1 MTR_8g063550 43.827 162 78 4 15 174 6 156 1.87e-44 157
MS.gene42977.t1 MTR_8g063550 43.827 162 78 4 15 174 6 156 3.37e-44 159
MS.gene42977.t1 MTR_8g063550 43.827 162 78 4 15 174 6 156 3.97e-44 159
MS.gene42977.t1 MTR_3g093040 43.529 170 82 5 14 180 106 264 6.74e-44 155
MS.gene42977.t1 MTR_1g097300 47.024 168 72 5 13 175 15 170 9.37e-44 160
MS.gene42977.t1 MTR_7g097090 42.949 156 76 1 17 172 12 154 2.95e-42 150
MS.gene42977.t1 MTR_1g090723 46.951 164 73 6 17 177 10 162 3.82e-42 156
MS.gene42977.t1 MTR_1g090723 44.311 167 72 5 17 177 10 161 4.09e-42 156
MS.gene42977.t1 MTR_1g090723 44.311 167 72 5 17 177 10 161 4.33e-42 156
MS.gene42977.t1 MTR_8g093580 37.674 215 98 6 15 205 6 208 1.38e-41 153
MS.gene42977.t1 MTR_8g099750 44.516 155 80 2 17 171 16 164 1.54e-41 146
MS.gene42977.t1 MTR_1g090720 42.857 168 81 4 15 176 42 200 9.86e-41 150
MS.gene42977.t1 MTR_0036s0150 39.785 186 95 6 17 199 7 178 1.42e-39 148
MS.gene42977.t1 MTR_2g086880 48.819 127 62 2 15 140 18 142 2.07e-38 145
MS.gene42977.t1 MTR_2g086880 48.819 127 62 2 15 140 18 142 2.50e-38 145
MS.gene42977.t1 MTR_3g098810 42.857 168 89 3 17 182 16 178 1.93e-37 136
MS.gene42977.t1 MTR_8g023840 49.254 134 64 3 18 148 14 146 1.07e-36 138
MS.gene42977.t1 MTR_4g052620 35.023 217 124 6 11 222 1 205 1.69e-36 134
MS.gene42977.t1 MTR_3g098810 49.618 131 62 2 17 145 16 144 6.69e-35 127
MS.gene42977.t1 MTR_3g070040 40.000 165 85 4 19 181 12 164 1.38e-34 130
MS.gene42977.t1 MTR_7g105170 30.000 250 156 9 15 257 4 241 2.82e-34 128
MS.gene42977.t1 MTR_3g096140 41.781 146 72 4 31 174 2 136 5.22e-34 129
MS.gene42977.t1 MTR_2g086690 40.606 165 79 6 17 172 6 160 1.61e-33 125
MS.gene42977.t1 MTR_8g023860 47.244 127 63 3 18 141 15 140 3.89e-32 126
MS.gene42977.t1 MTR_8g094580 50.000 112 48 3 63 174 1 104 6.05e-32 121
MS.gene42977.t1 MTR_8g023900 37.870 169 87 4 18 183 196 349 6.23e-30 120
MS.gene42977.t1 MTR_8g023900 35.542 166 91 4 18 180 15 167 6.79e-29 117
MS.gene42977.t1 MTR_8g023930 36.686 169 89 4 18 183 27 180 1.54e-28 116
MS.gene42977.t1 MTR_4g094302 37.342 158 88 2 17 174 13 159 2.14e-28 110
MS.gene42977.t1 MTR_4g094302 40.476 126 67 1 17 142 13 130 1.07e-26 104
MS.gene42977.t1 MTR_8g023880 33.155 187 86 8 18 186 10 175 1.18e-21 94.0
MS.gene42977.t1 MTR_7g070140 44.828 87 45 1 68 154 17 100 1.73e-19 84.3
MS.gene42977.t1 MTR_8g093790 32.941 170 79 7 17 184 12 148 1.75e-19 85.9
MS.gene42977.t1 MTR_3g096400 32.099 162 95 5 17 173 9 160 2.87e-18 83.2
MS.gene42977.t1 MTR_7g083330 29.518 166 100 6 18 181 21 171 3.98e-16 76.6
MS.gene42977.t1 MTR_7g083370 33.333 126 76 5 18 140 13 133 2.20e-15 73.2
MS.gene42977.t1 MTR_7g083360 31.944 144 90 6 13 152 7 146 5.95e-15 72.4
MS.gene42977.t1 MTR_1g087190 58.333 48 19 1 17 63 7 54 2.56e-13 64.7
MS.gene42977.t1 MTR_7g070150 39.241 79 36 1 108 186 3 69 1.18e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42977.t1 AT1G26870 61.091 275 89 5 1 264 1 268 2.02e-108 325
MS.gene42977.t1 AT5G39820 66.667 204 55 4 2 192 7 210 4.86e-97 293
MS.gene42977.t1 AT2G43000 60.116 173 57 3 9 181 12 172 3.06e-72 228
MS.gene42977.t1 AT3G12910 56.284 183 71 5 1 175 5 186 6.28e-62 202
MS.gene42977.t1 AT2G02450 47.573 206 84 5 14 219 50 231 1.35e-59 198
MS.gene42977.t1 AT2G02450 47.573 206 84 5 14 219 50 231 1.71e-59 199
MS.gene42977.t1 AT3G15510 53.704 162 73 2 19 178 21 182 1.80e-58 195
MS.gene42977.t1 AT3G04070 53.529 170 64 3 17 178 12 174 6.48e-58 192
MS.gene42977.t1 AT1G69490 45.813 203 103 4 17 219 11 206 9.72e-58 190
MS.gene42977.t1 AT1G61110 53.143 175 71 4 17 183 18 189 4.18e-57 190
MS.gene42977.t1 AT3G04070 51.397 179 70 3 17 178 12 190 6.36e-57 191
MS.gene42977.t1 AT5G63790 44.186 215 101 6 3 215 36 233 5.71e-56 187
MS.gene42977.t1 AT5G63790 44.186 215 101 6 3 215 46 243 7.76e-56 186
MS.gene42977.t1 AT1G01720 52.410 166 71 3 17 182 9 166 5.39e-55 183
MS.gene42977.t1 AT4G27410 50.595 168 72 3 17 184 16 172 7.75e-55 183
MS.gene42977.t1 AT1G76420 46.524 187 84 2 2 188 15 185 7.42e-54 182
MS.gene42977.t1 AT2G17040 50.286 175 70 4 12 185 3 161 7.61e-54 180
MS.gene42977.t1 AT5G61430 35.811 296 145 6 1 286 1 261 1.81e-53 181
MS.gene42977.t1 AT5G08790 51.534 163 71 4 13 174 4 159 1.82e-53 179
MS.gene42977.t1 AT3G15500 51.786 168 66 4 17 182 16 170 2.99e-53 180
MS.gene42977.t1 AT4G36160 47.701 174 75 4 17 187 16 176 5.28e-53 181
MS.gene42977.t1 AT5G07680 43.868 212 100 3 17 218 5 207 5.31e-53 179
MS.gene42977.t1 AT4G36160 47.701 174 75 4 17 187 12 172 5.79e-53 181
MS.gene42977.t1 AT4G36160 47.701 174 75 4 17 187 12 172 5.79e-53 181
MS.gene42977.t1 AT5G07680 43.868 212 100 3 17 218 19 221 7.46e-53 179
MS.gene42977.t1 AT1G77450 40.650 246 128 7 17 253 12 248 7.51e-53 177
MS.gene42977.t1 AT5G39610 44.554 202 89 4 17 206 22 212 1.21e-52 177
MS.gene42977.t1 AT1G12260 48.810 168 70 4 17 181 9 163 1.29e-52 179
MS.gene42977.t1 AT1G52880 54.438 169 66 3 19 181 21 184 1.34e-52 178
MS.gene42977.t1 AT1G12260 48.810 168 70 4 17 181 9 163 1.53e-52 180
MS.gene42977.t1 AT2G18060 47.701 174 74 5 17 187 11 170 2.76e-52 179
MS.gene42977.t1 AT2G18060 47.701 174 74 5 17 187 11 170 2.76e-52 179
MS.gene42977.t1 AT1G52890 51.479 169 66 5 17 183 16 170 3.22e-52 177
MS.gene42977.t1 AT2G24430 47.093 172 81 1 9 180 10 171 1.09e-51 176
MS.gene42977.t1 AT2G24430 47.093 172 81 1 9 180 10 171 1.09e-51 176
MS.gene42977.t1 AT4G10350 36.934 287 137 9 17 293 11 263 4.65e-51 175
MS.gene42977.t1 AT3G17730 48.193 166 73 3 17 180 8 162 5.21e-51 172
MS.gene42977.t1 AT4G27410 45.946 185 72 4 17 184 16 189 1.72e-50 172
MS.gene42977.t1 AT5G66300 44.240 217 98 7 17 225 14 215 1.75e-50 172
MS.gene42977.t1 AT1G62700 47.059 170 74 3 17 183 9 165 2.20e-50 174
MS.gene42977.t1 AT1G62700 47.059 170 74 3 17 183 9 165 2.20e-50 174
MS.gene42977.t1 AT3G18400 48.235 170 76 3 11 180 1 158 3.32e-50 172
MS.gene42977.t1 AT5G18270 48.750 160 74 2 17 176 23 174 3.48e-50 172
MS.gene42977.t1 AT3G29035 47.150 193 87 6 6 195 14 194 3.97e-50 171
MS.gene42977.t1 AT1G71930 38.550 262 128 9 11 263 5 242 5.11e-50 171
MS.gene42977.t1 AT1G71930 38.550 262 128 9 11 263 5 242 5.11e-50 171
MS.gene42977.t1 AT3G04060 48.256 172 77 3 17 184 22 185 5.61e-50 172
MS.gene42977.t1 AT5G62380 47.826 161 68 4 17 174 9 156 5.89e-50 172
MS.gene42977.t1 AT5G62380 47.826 161 68 4 17 174 9 156 5.89e-50 172
MS.gene42977.t1 AT1G33280 50.307 163 64 3 17 176 10 158 7.47e-50 171
MS.gene42977.t1 AT5G18270 48.125 160 75 2 17 176 23 174 2.43e-49 170
MS.gene42977.t1 AT3G03200 45.604 182 86 5 17 195 8 179 4.05e-49 173
MS.gene42977.t1 AT1G65910 49.080 163 70 3 15 175 6 157 5.41e-49 176
MS.gene42977.t1 AT4G17980 47.500 160 75 2 17 174 8 160 5.60e-49 167
MS.gene42977.t1 AT4G17980 47.500 160 75 2 17 174 8 160 6.63e-49 167
MS.gene42977.t1 AT3G15170 47.337 169 82 2 12 180 17 178 1.47e-48 167
MS.gene42977.t1 AT5G17260 46.199 171 80 4 17 185 8 168 1.50e-48 171
MS.gene42977.t1 AT5G53950 45.930 172 86 2 13 184 15 179 1.55e-48 169
MS.gene42977.t1 AT3G61910 38.961 231 122 7 17 233 13 238 3.56e-48 167
MS.gene42977.t1 AT2G46770 46.108 167 81 3 17 176 18 182 1.82e-47 166
MS.gene42977.t1 AT3G10500 46.667 165 75 4 15 177 9 162 7.56e-46 166
MS.gene42977.t1 AT5G13180 49.068 161 69 2 17 177 16 163 1.32e-45 157
MS.gene42977.t1 AT1G32770 45.122 164 84 3 17 176 18 179 1.62e-45 160
MS.gene42977.t1 AT1G54330 46.707 167 73 3 17 181 8 160 1.77e-45 159
MS.gene42977.t1 AT1G79580 46.626 163 71 4 17 176 19 168 3.05e-45 160
MS.gene42977.t1 AT1G79580 46.626 163 71 4 17 176 19 168 3.05e-45 160
MS.gene42977.t1 AT1G79580 46.626 163 71 4 17 176 19 168 3.05e-45 160
MS.gene42977.t1 AT1G79580 46.626 163 71 4 17 176 19 168 3.05e-45 160
MS.gene42977.t1 AT1G79580 46.626 163 71 4 17 176 19 168 3.05e-45 160
MS.gene42977.t1 AT1G32510 37.349 249 134 7 17 254 8 245 3.36e-45 157
MS.gene42977.t1 AT3G12977 43.258 178 91 3 2 179 5 172 4.37e-45 157
MS.gene42977.t1 AT5G46590 54.688 128 55 2 17 142 8 134 4.86e-45 157
MS.gene42977.t1 AT5G46590 54.688 128 55 2 17 142 8 134 7.51e-45 157
MS.gene42977.t1 AT1G56010 46.369 179 77 5 2 174 6 171 7.56e-45 158
MS.gene42977.t1 AT4G35580 49.686 159 67 4 18 174 12 159 8.11e-45 162
MS.gene42977.t1 AT1G33060 46.341 164 75 3 13 174 22 174 8.96e-45 164
MS.gene42977.t1 AT1G33060 46.341 164 75 3 13 174 22 174 9.13e-45 164
MS.gene42977.t1 AT4G35580 49.686 159 67 4 18 174 12 159 9.30e-45 162
MS.gene42977.t1 AT4G35580 49.686 159 67 4 18 174 12 159 9.79e-45 162
MS.gene42977.t1 AT1G34180 45.087 173 82 3 7 177 8 169 1.76e-44 160
MS.gene42977.t1 AT3G10490 44.512 164 79 4 15 176 27 180 2.39e-44 154
MS.gene42977.t1 AT5G24590 46.784 171 78 4 9 176 6 166 3.59e-44 159
MS.gene42977.t1 AT1G34190 44.828 174 81 4 7 177 8 169 7.02e-44 160
MS.gene42977.t1 AT1G34180 45.087 173 82 3 7 177 8 169 9.05e-44 160
MS.gene42977.t1 AT5G04410 45.055 182 83 7 15 193 9 176 2.58e-43 159
MS.gene42977.t1 AT3G10480 44.578 166 76 4 15 176 27 180 3.72e-43 156
MS.gene42977.t1 AT3G10480 44.048 168 73 4 15 176 27 179 4.88e-43 156
MS.gene42977.t1 AT3G10490 44.512 164 79 4 15 176 27 180 5.07e-43 156
MS.gene42977.t1 AT1G34180 41.622 185 83 3 7 177 8 181 4.02e-42 154
MS.gene42977.t1 AT3G49530 43.396 159 78 3 18 174 16 164 1.11e-41 152
MS.gene42977.t1 AT1G34180 41.622 185 83 3 7 177 8 181 1.80e-41 154
MS.gene42977.t1 AT3G49530 43.396 159 78 3 18 174 16 164 3.22e-41 152
MS.gene42977.t1 AT5G09330 41.975 162 81 4 15 174 6 156 8.47e-41 151
MS.gene42977.t1 AT5G09330 41.975 162 81 4 15 174 6 156 8.47e-41 151
MS.gene42977.t1 AT5G09330 41.975 162 81 4 15 174 6 156 8.47e-41 151
MS.gene42977.t1 AT5G09330 41.975 162 81 4 15 174 6 156 8.47e-41 151
MS.gene42977.t1 AT5G09330 41.975 162 81 4 15 174 6 156 8.47e-41 151
MS.gene42977.t1 AT5G64060 31.786 280 158 10 15 285 6 261 3.29e-40 146
MS.gene42977.t1 AT4G28530 41.379 174 73 3 17 174 12 172 6.05e-40 145
MS.gene42977.t1 AT2G33480 41.899 179 90 4 1 179 1 165 8.33e-40 143
MS.gene42977.t1 AT5G22290 39.535 172 83 4 15 182 21 175 5.06e-39 143
MS.gene42977.t1 AT2G33480 41.341 179 89 4 1 179 1 163 1.61e-38 139
MS.gene42977.t1 AT3G44290 46.825 126 64 2 16 140 15 138 1.28e-37 136
MS.gene42977.t1 AT3G10480 37.563 197 78 4 15 176 27 213 1.31e-37 142
MS.gene42977.t1 AT2G27300 44.531 128 68 2 14 140 13 138 1.63e-37 139
MS.gene42977.t1 AT3G44290 46.825 126 64 2 16 140 15 138 3.92e-37 137
MS.gene42977.t1 AT5G61430 33.476 233 111 5 63 286 1 198 1.05e-34 129
MS.gene42977.t1 AT5G04395 39.623 159 80 3 12 156 25 181 1.62e-34 126
MS.gene42977.t1 AT1G32870 50.769 130 58 3 15 142 10 135 4.05e-33 130
MS.gene42977.t1 AT1G32870 50.769 130 58 3 15 142 10 135 4.12e-33 130
MS.gene42977.t1 AT2G43000 58.095 105 32 3 77 181 2 94 4.52e-33 123
MS.gene42977.t1 AT1G32870 50.769 130 58 3 15 142 46 171 8.17e-33 130
MS.gene42977.t1 AT4G10350 33.473 239 118 8 62 293 12 216 2.06e-30 119
MS.gene42977.t1 AT5G22380 34.536 194 106 8 18 204 8 187 8.84e-30 115
MS.gene42977.t1 AT5G64530 39.264 163 82 3 17 174 5 155 9.17e-30 114
MS.gene42977.t1 AT3G44350 35.429 175 95 5 11 178 1 164 1.48e-29 115
MS.gene42977.t1 AT3G12977 45.833 120 55 3 60 179 10 119 4.60e-29 113
MS.gene42977.t1 AT1G56010 49.138 116 43 3 63 174 1 104 7.06e-29 113
MS.gene42977.t1 AT5G64530 43.307 127 60 2 17 143 5 119 1.80e-28 109
MS.gene42977.t1 AT3G44350 38.000 150 83 4 11 153 1 147 4.25e-28 108
MS.gene42977.t1 AT4G01550 43.284 134 72 3 16 145 5 138 4.85e-28 115
MS.gene42977.t1 AT4G01540 41.481 135 74 4 16 145 5 139 1.45e-24 104
MS.gene42977.t1 AT4G01540 40.411 146 79 5 16 156 5 147 2.48e-24 103
MS.gene42977.t1 AT4G01520 34.737 190 102 7 18 202 7 179 2.58e-24 102
MS.gene42977.t1 AT4G01540 41.481 135 74 4 16 145 5 139 3.05e-24 104
MS.gene42977.t1 AT4G01540 41.481 135 74 4 16 145 5 139 3.48e-24 103
MS.gene42977.t1 AT1G02250 34.673 199 113 8 18 211 6 192 2.70e-23 100
MS.gene42977.t1 AT4G28530 40.476 126 59 2 17 126 12 137 7.99e-22 95.5
MS.gene42977.t1 AT1G02230 38.806 134 74 5 18 146 6 136 8.47e-22 96.3
MS.gene42977.t1 AT2G33480 40.179 112 56 3 68 179 8 108 6.31e-21 90.5
MS.gene42977.t1 AT2G18060 47.368 95 36 4 93 187 2 82 9.50e-21 91.7
MS.gene42977.t1 AT3G04420 37.795 127 73 3 18 140 6 130 3.15e-20 90.5
MS.gene42977.t1 AT3G04420 37.795 127 73 3 18 140 6 130 1.14e-19 89.7
MS.gene42977.t1 AT1G01010 28.800 250 151 8 18 256 6 239 3.34e-18 86.3
MS.gene42977.t1 AT1G02220 37.008 127 71 4 18 140 6 127 1.79e-16 80.9
MS.gene42977.t1 AT3G04430 36.842 133 70 5 21 141 6 136 2.60e-15 74.3
MS.gene42977.t1 AT5G50820 35.878 131 72 5 17 144 19 140 3.72e-15 73.9
MS.gene42977.t1 AT5G14000 32.308 130 82 3 18 145 18 143 1.27e-14 71.6
MS.gene42977.t1 AT5G14000 27.108 166 103 4 18 181 18 167 1.42e-14 72.4
MS.gene42977.t1 AT3G56530 30.189 159 95 5 17 172 54 199 2.41e-14 73.9
MS.gene42977.t1 AT3G10490 38.202 89 45 3 88 176 2 80 7.81e-14 72.8
MS.gene42977.t1 AT3G10490 38.202 89 45 3 88 176 2 80 7.81e-14 72.8
MS.gene42977.t1 AT5G22290 36.957 92 38 3 94 182 2 76 4.67e-12 65.9

Find 95 sgRNAs with CRISPR-Local

Find 139 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATCAATGGATCAATAAT+TGG 0.177383 8.3:-43388536 None:intergenic
TGAAATTGGTAACCGGTATA+AGG 0.232151 8.3:-43388564 None:intergenic
TTAGGAATGTTAGCCATTAA+TGG 0.250578 8.3:-43388755 None:intergenic
GTCTTGTCTACATATTTCTT+TGG 0.251750 8.3:-43387635 None:intergenic
CCAGCTCTTGTTACCCTATT+AGG 0.256540 8.3:-43387440 None:intergenic
TCATGTTTGAGGAACAAAAT+TGG 0.264318 8.3:-43388382 None:intergenic
CTTGAAGAGGTTATGCTTCC+AGG 0.267006 8.3:+43386572 MS.gene42977:CDS
AGATCTTGATCATTTGAAAT+TGG 0.267969 8.3:-43388578 None:intergenic
TTACAAGACCATTACAATAA+TGG 0.289925 8.3:+43388728 MS.gene42977:CDS
CAATAATGGGTATCCATTAA+TGG 0.291946 8.3:+43388742 MS.gene42977:CDS
ATTATAAGATGGAACATCTA+AGG 0.299587 8.3:-43388510 None:intergenic
TACAAGACCATTACAATAAT+GGG 0.299937 8.3:+43388729 MS.gene42977:CDS
ATCATTTGTTAGAACATTAG+AGG 0.302550 8.3:-43388348 None:intergenic
TTCCTGTACTTTCTGTCTCT+TGG 0.313082 8.3:-43387407 None:intergenic
GGAACAGTGCAAGACCTAAT+AGG 0.314506 8.3:+43387426 MS.gene42977:CDS
GGGTAACAAGAGCTGGGTTT+TGG 0.314918 8.3:+43387447 MS.gene42977:CDS
TATTCAACTTGTAGGAATCT+TGG 0.319905 8.3:+43388237 MS.gene42977:intron
AGGTTATGCTTCCAGGGTTT+AGG 0.326370 8.3:+43386579 MS.gene42977:CDS
GGAAGTCATCAAGTCTTGTT+TGG 0.332787 8.3:+43388873 MS.gene42977:CDS
TTCAGTGTGCCTCTCAATAT+TGG 0.343215 8.3:+43388842 MS.gene42977:CDS
ACACGAGGCACGTTCGCATT+AGG 0.344052 8.3:-43388773 None:intergenic
GAGGTTGATGTTTCAAGTAA+AGG 0.371540 8.3:-43388329 None:intergenic
CCAACTGATGAAGAACTTGT+TGG 0.382953 8.3:+43386608 MS.gene42977:CDS
GAACCCTCTGAGGAATAAAT+AGG 0.385421 8.3:-43387491 None:intergenic
GAAATTGGTAACCGGTATAA+GGG 0.389296 8.3:-43388563 None:intergenic
TAGGTTATTGTGGTTATTAG+TGG 0.402763 8.3:-43388447 None:intergenic
TGTATAGAGTTGGCAAGTAC+AGG 0.404014 8.3:+43387359 MS.gene42977:intron
CTTTGTTAACATCATGTTTG+AGG 0.406276 8.3:-43388393 None:intergenic
TCAGAGGGTTCTAAGTGTAT+TGG 0.407108 8.3:+43387503 MS.gene42977:CDS
AAGAGGTTAAGTGTTGTGTT+AGG 0.408400 8.3:-43388466 None:intergenic
ATTCAACTTGTAGGAATCTT+GGG 0.422352 8.3:+43388238 MS.gene42977:intron
ATGGATACCCATTATTGTAA+TGG 0.426120 8.3:-43388736 None:intergenic
TACTACCAAGTGTTATACTT+AGG 0.432517 8.3:+43388937 MS.gene42977:CDS
GATCATTTGAAATTGGTAAC+CGG 0.434751 8.3:-43388571 None:intergenic
ACTACCAAGTGTTATACTTA+GGG 0.437461 8.3:+43388938 MS.gene42977:CDS
GAACAGTGCAAGACCTAATA+GGG 0.447391 8.3:+43387427 MS.gene42977:CDS
ATAATTGGATTATTATAAGA+TGG 0.450751 8.3:-43388521 None:intergenic
ATGGATACGGTTCGACCCAT+TGG 0.453647 8.3:+43388812 MS.gene42977:CDS
ATCTTGTAACAAAACTTCAA+TGG 0.456838 8.3:+43388643 MS.gene42977:CDS
GAAGTCATCAAGTCTTGTTT+GGG 0.460153 8.3:+43388874 MS.gene42977:CDS
CCTAATAGGGTAACAAGAGC+TGG 0.463143 8.3:+43387440 MS.gene42977:CDS
TATAAGGGTTTGTAAATCAA+TGG 0.465297 8.3:-43388548 None:intergenic
ATATGTAGACAAGACCATTC+CGG 0.469723 8.3:+43387643 MS.gene42977:CDS
CCAAAGGAGTCAAAACTGAT+TGG 0.471412 8.3:+43387564 MS.gene42977:CDS
ATATTTATAAATTTGATCCA+TGG 0.478110 8.3:+43386693 MS.gene42977:CDS
TGCTCTTTGAGCGGTAGCAT+TGG 0.484427 8.3:-43388285 None:intergenic
TATTTATAAATTTGATCCAT+GGG 0.487821 8.3:+43386694 MS.gene42977:CDS
CCAACAAGTTCTTCATCAGT+TGG 0.490455 8.3:-43386608 None:intergenic
TAGGATATGGAAGAGAGAAA+TGG 0.494544 8.3:+43386536 None:intergenic
ATATTGAGAGGCACACTGAA+TGG 0.495510 8.3:-43388839 None:intergenic
TTTACTTACATTGGCCGGAA+TGG 0.497789 8.3:-43387657 None:intergenic
TGATTTACAAACCCTTATAC+CGG 0.505584 8.3:+43388552 MS.gene42977:CDS
TATTGAGAGGCACACTGAAT+GGG 0.507464 8.3:-43388838 None:intergenic
CTAGAGTGACTTGCAAAGCT+AGG 0.507948 8.3:-43388419 None:intergenic
AAAGAGCACTCTCTCACTCA+TGG 0.512415 8.3:+43388300 MS.gene42977:CDS
GTCTTACTTGGTAGATCCCA+TGG 0.514805 8.3:-43386710 None:intergenic
AGGAATCTTGGGCAATATGC+AGG 0.518840 8.3:+43388249 MS.gene42977:intron
TTGAAGAGGTTATGCTTCCA+GGG 0.523265 8.3:+43386573 MS.gene42977:CDS
AGTGTTGTGTTAGGTTATTG+TGG 0.533214 8.3:-43388457 None:intergenic
TTGAGGAACAAAATTGGTTG+TGG 0.548581 8.3:-43388376 None:intergenic
GATGATGAATCTATGAGAGA+AGG 0.549029 8.3:-43387608 None:intergenic
TGTTGATGATCAACAAGAGA+TGG 0.550830 8.3:+43388793 MS.gene42977:CDS
AGACCTATTTATTCCTCAGA+GGG 0.557263 8.3:+43387488 MS.gene42977:CDS
CAAGATCTTAACCTTAGCAC+TGG 0.557408 8.3:+43388593 MS.gene42977:CDS
ACACTGAATGGGAATCCAAT+GGG 0.562023 8.3:-43388827 None:intergenic
GTTGATGTTTCAAGTAAAGG+AGG 0.565369 8.3:-43388326 None:intergenic
AAGTGTAGTACTACTAGAAG+AGG 0.565912 8.3:-43388483 None:intergenic
GTATAGAGTTGGCAAGTACA+GGG 0.573043 8.3:+43387360 MS.gene42977:intron
TTATAAGATGGAACATCTAA+GGG 0.574187 8.3:-43388509 None:intergenic
TTGTTACAAGATGTTTCAAG+AGG 0.576354 8.3:-43388632 None:intergenic
GTAACAACTTCTAACTACAT+TGG 0.580770 8.3:+43388701 MS.gene42977:CDS
GGGTTCATCAGAAGTACAAG+AGG 0.581707 8.3:-43388903 None:intergenic
CACACTGAATGGGAATCCAA+TGG 0.582826 8.3:-43388828 None:intergenic
AAGAGCACTCTCTCACTCAT+GGG 0.585835 8.3:+43388301 MS.gene42977:CDS
CAAGTACAGGGGAGAAAGAG+TGG 0.591955 8.3:+43387372 MS.gene42977:CDS
CTAATAGGGTAACAAGAGCT+GGG 0.601926 8.3:+43387441 MS.gene42977:CDS
AAAATACTAAGCCAGTGCTA+AGG 0.602217 8.3:-43388604 None:intergenic
CAGACCTATTTATTCCTCAG+AGG 0.608250 8.3:+43387487 MS.gene42977:CDS
CTCTCAATATTGGTGATGCA+TGG 0.610941 8.3:+43388852 MS.gene42977:CDS
GTCCAAGAGACAGAAAGTAC+AGG 0.615144 8.3:+43387405 MS.gene42977:CDS
TACAAAGGCAGAGCTGCCAA+AGG 0.615311 8.3:+43387548 MS.gene42977:CDS
GTTGGATGAAACCTAAACCC+TGG 0.628808 8.3:-43386590 None:intergenic
TGATCAACAAGAGATGGATA+CGG 0.630429 8.3:+43388799 MS.gene42977:CDS
CATGCATCACCAATATTGAG+AGG 0.634336 8.3:-43388851 None:intergenic
TTGATGTTTCAAGTAAAGGA+GGG 0.639419 8.3:-43388325 None:intergenic
TTGATGAGCTCAATAGCAAG+AGG 0.642108 8.3:-43386662 None:intergenic
TACTTGTGAGAAACTTGAAG+AGG 0.650571 8.3:+43386559 MS.gene42977:CDS
GTGAGAGAGTGCTCTTTGAG+CGG 0.659294 8.3:-43388294 None:intergenic
CTTGGTAGTAGAATAACTAG+AGG 0.660558 8.3:-43388924 None:intergenic
TAAACCCTAAGTATAACACT+TGG 0.675221 8.3:-43388942 None:intergenic
TGATGAGCTCAATAGCAAGA+GGG 0.683027 8.3:-43386661 None:intergenic
TATAGAGTTGGCAAGTACAG+GGG 0.692122 8.3:+43387361 MS.gene42977:intron
TTGGTAGTAGAATAACTAGA+GGG 0.705649 8.3:-43388923 None:intergenic
AATACACTTAGAACCCTCTG+AGG 0.742862 8.3:-43387501 None:intergenic
TCTTGTTGATCATCAACACG+AGG 0.747637 8.3:-43388788 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGATATATAAGAAATTA+GGG + chr8.3:43388039-43388058 MS.gene42977:intron 10.0%
!! ATAATTGGATTATTATAAGA+TGG - chr8.3:43388524-43388543 None:intergenic 15.0%
!! ATATTTATAAATTTGATCCA+TGG + chr8.3:43386693-43386712 MS.gene42977:CDS 15.0%
!! GAATAGATATATAAGAAATT+AGG + chr8.3:43388038-43388057 MS.gene42977:intron 15.0%
!! TATTTATAAATTTGATCCAT+GGG + chr8.3:43386694-43386713 MS.gene42977:CDS 15.0%
!! TTCTAACTAAATATAGATTT+GGG - chr8.3:43387691-43387710 None:intergenic 15.0%
!!! GTAATTATTTTTTTAACAAG+TGG - chr8.3:43388156-43388175 None:intergenic 15.0%
!! GTTCTAACTAAATATAGATT+TGG - chr8.3:43387692-43387711 None:intergenic 20.0%
!! TAAAAAGTAAAGTGATAAAG+AGG - chr8.3:43386819-43386838 None:intergenic 20.0%
!! TAAATCAATGGATCAATAAT+TGG - chr8.3:43388539-43388558 None:intergenic 20.0%
!! TATATTTAGTTAGAACTTGT+TGG + chr8.3:43387696-43387715 MS.gene42977:intron 20.0%
!!! AAATCCTTAGTTTTTTACAA+AGG + chr8.3:43387533-43387552 MS.gene42977:CDS 20.0%
!!! GAAGTAAATTTTACTTACAT+TGG - chr8.3:43387669-43387688 None:intergenic 20.0%
! ATCAGTAAAGTTATGGTATT+TGG + chr8.3:43387847-43387866 MS.gene42977:intron 25.0%
! ATCTTGTAACAAAACTTCAA+TGG + chr8.3:43388643-43388662 MS.gene42977:CDS 25.0%
! ATGAGTAATCAGTAAAGTTA+TGG + chr8.3:43387840-43387859 MS.gene42977:intron 25.0%
! ATTATAAGATGGAACATCTA+AGG - chr8.3:43388513-43388532 None:intergenic 25.0%
! CATTTGACAAATAATCAAGT+AGG + chr8.3:43387805-43387824 MS.gene42977:intron 25.0%
! GTTATGGTATTTGGATTATT+TGG + chr8.3:43387856-43387875 MS.gene42977:intron 25.0%
! TACAAGACCATTACAATAAT+GGG + chr8.3:43388729-43388748 MS.gene42977:CDS 25.0%
! TATAAGGGTTTGTAAATCAA+TGG - chr8.3:43388551-43388570 None:intergenic 25.0%
! TATATGTAAGTTACACATCT+AGG - chr8.3:43386884-43386903 None:intergenic 25.0%
! TTAAATGCTATTCAACTTGT+AGG + chr8.3:43388229-43388248 MS.gene42977:intron 25.0%
! TTACAAGACCATTACAATAA+TGG + chr8.3:43388728-43388747 MS.gene42977:CDS 25.0%
! TTATAAGATGGAACATCTAA+GGG - chr8.3:43388512-43388531 None:intergenic 25.0%
!! AGATCTTGATCATTTGAAAT+TGG - chr8.3:43388581-43388600 None:intergenic 25.0%
!! ATCATTTGTTAGAACATTAG+AGG - chr8.3:43388351-43388370 None:intergenic 25.0%
!! GTTAAGACTTTTTGATATCT+TGG + chr8.3:43387298-43387317 MS.gene42977:intron 25.0%
!! TAAATTTTACTTACATTGGC+CGG - chr8.3:43387665-43387684 None:intergenic 25.0%
!! TATCACATCACTCTATTTTA+AGG - chr8.3:43387961-43387980 None:intergenic 25.0%
!! TGATATTTTGTGTATAGAGT+TGG + chr8.3:43387349-43387368 MS.gene42977:intron 25.0%
!!! ATCACATCACTCTATTTTAA+GGG - chr8.3:43387960-43387979 None:intergenic 25.0%
!!! GATTTTTCATCTTTGCTATT+AGG + chr8.3:43388665-43388684 MS.gene42977:CDS 25.0%
ACAATTTCTGACATGTACAT+AGG + chr8.3:43386986-43387005 MS.gene42977:intron 30.0%
ATGGATACCCATTATTGTAA+TGG - chr8.3:43388739-43388758 None:intergenic 30.0%
ATTCAACTTGTAGGAATCTT+GGG + chr8.3:43388238-43388257 MS.gene42977:intron 30.0%
CAAAGTGATAAACACATCTA+GGG - chr8.3:43386766-43386785 None:intergenic 30.0%
CTTTGTTAACATCATGTTTG+AGG - chr8.3:43388396-43388415 None:intergenic 30.0%
GTAACAACTTCTAACTACAT+TGG + chr8.3:43388701-43388720 MS.gene42977:CDS 30.0%
GTCTTGTCTACATATTTCTT+TGG - chr8.3:43387638-43387657 None:intergenic 30.0%
TAACCTAAAATGCACTTAGT+CGG + chr8.3:43387881-43387900 MS.gene42977:intron 30.0%
TAGGTTATTGTGGTTATTAG+TGG - chr8.3:43388450-43388469 None:intergenic 30.0%
TATTCAACTTGTAGGAATCT+TGG + chr8.3:43388237-43388256 MS.gene42977:intron 30.0%
TCAAAGTGATAAACACATCT+AGG - chr8.3:43386767-43386786 None:intergenic 30.0%
TCATGTTTGAGGAACAAAAT+TGG - chr8.3:43388385-43388404 None:intergenic 30.0%
TCATTTGACCAGAAAACAAT+CGG - chr8.3:43388111-43388130 None:intergenic 30.0%
TCTGCCTTTGTAAAAAACTA+AGG - chr8.3:43387540-43387559 None:intergenic 30.0%
TGATTTACAAACCCTTATAC+CGG + chr8.3:43388552-43388571 MS.gene42977:CDS 30.0%
TTAGGAATGTTAGCCATTAA+TGG - chr8.3:43388758-43388777 None:intergenic 30.0%
TTATCCAAACATCGTACTAT+AGG + chr8.3:43387266-43387285 MS.gene42977:intron 30.0%
TTGTTACAAGATGTTTCAAG+AGG - chr8.3:43388635-43388654 None:intergenic 30.0%
TTTGATACATCTTGTTCGAA+TGG + chr8.3:43387724-43387743 MS.gene42977:intron 30.0%
! GATCATTTGAAATTGGTAAC+CGG - chr8.3:43388574-43388593 None:intergenic 30.0%
! TTGATGTTTCAAGTAAAGGA+GGG - chr8.3:43388328-43388347 None:intergenic 30.0%
! TTGGTAGTAGAATAACTAGA+GGG - chr8.3:43388926-43388945 None:intergenic 30.0%
!! CAATAATGGGTATCCATTAA+TGG + chr8.3:43388742-43388761 MS.gene42977:CDS 30.0%
!!! GTTGCTGAATTTTTTTCTTC+AGG - chr8.3:43386640-43386659 None:intergenic 30.0%
AAAATACTAAGCCAGTGCTA+AGG - chr8.3:43388607-43388626 None:intergenic 35.0%
AAGTGTAGTACTACTAGAAG+AGG - chr8.3:43388486-43388505 None:intergenic 35.0%
AATATAAGGTTCGCTTGATG+TGG - chr8.3:43386857-43386876 None:intergenic 35.0%
ACTACCTATAGTACGATGTT+TGG - chr8.3:43387273-43387292 None:intergenic 35.0%
AGACCTATTTATTCCTCAGA+GGG + chr8.3:43387488-43387507 MS.gene42977:CDS 35.0%
AGTGTTGTGTTAGGTTATTG+TGG - chr8.3:43388460-43388479 None:intergenic 35.0%
ATATGTAGACAAGACCATTC+CGG + chr8.3:43387643-43387662 MS.gene42977:CDS 35.0%
CACATCTAGGTAGGAATATA+AGG - chr8.3:43386871-43386890 None:intergenic 35.0%
CATTTGACCAGAAAACAATC+GGG - chr8.3:43388110-43388129 None:intergenic 35.0%
GATGATGAATCTATGAGAGA+AGG - chr8.3:43387611-43387630 None:intergenic 35.0%
GCACTATTATGAGTCTTACT+TGG - chr8.3:43386725-43386744 None:intergenic 35.0%
GTGATAAAGAGGTCAAATAC+TGG - chr8.3:43386808-43386827 None:intergenic 35.0%
TACTTGTGAGAAACTTGAAG+AGG + chr8.3:43386559-43386578 MS.gene42977:CDS 35.0%
TGATCAACAAGAGATGGATA+CGG + chr8.3:43388799-43388818 MS.gene42977:CDS 35.0%
TGTAAGTTACACATCTAGGT+AGG - chr8.3:43386880-43386899 None:intergenic 35.0%
TGTGGTGCACACAAAAAATT+AGG - chr8.3:43387923-43387942 None:intergenic 35.0%
TTGAGGAACAAAATTGGTTG+TGG - chr8.3:43388379-43388398 None:intergenic 35.0%
! AAAATGACCCGATTGTTTTC+TGG + chr8.3:43388100-43388119 MS.gene42977:intron 35.0%
! AAGAGGTTAAGTGTTGTGTT+AGG - chr8.3:43388469-43388488 None:intergenic 35.0%
! AATCCGACTAAGTGCATTTT+AGG - chr8.3:43387887-43387906 None:intergenic 35.0%
! AGAAAACAATCGGGTCATTT+TGG - chr8.3:43388101-43388120 None:intergenic 35.0%
! CTTGGTAGTAGAATAACTAG+AGG - chr8.3:43388927-43388946 None:intergenic 35.0%
! GAAATTGGTAACCGGTATAA+GGG - chr8.3:43388566-43388585 None:intergenic 35.0%
! GTTGATGTTTCAAGTAAAGG+AGG - chr8.3:43388329-43388348 None:intergenic 35.0%
! TGAAATTGGTAACCGGTATA+AGG - chr8.3:43388567-43388586 None:intergenic 35.0%
!! GAAGTCATCAAGTCTTGTTT+GGG + chr8.3:43388874-43388893 MS.gene42977:CDS 35.0%
!! GAGGTTGATGTTTCAAGTAA+AGG - chr8.3:43388332-43388351 None:intergenic 35.0%
!! TGTTGATGATCAACAAGAGA+TGG + chr8.3:43388793-43388812 MS.gene42977:CDS 35.0%
AATACACTTAGAACCCTCTG+AGG - chr8.3:43387504-43387523 None:intergenic 40.0%
ACACTGAATGGGAATCCAAT+GGG - chr8.3:43388830-43388849 None:intergenic 40.0%
CAAGATCTTAACCTTAGCAC+TGG + chr8.3:43388593-43388612 MS.gene42977:CDS 40.0%
CAGACCTATTTATTCCTCAG+AGG + chr8.3:43387487-43387506 MS.gene42977:CDS 40.0%
CATGCATCACCAATATTGAG+AGG - chr8.3:43388854-43388873 None:intergenic 40.0%
CCAAAGGAGTCAAAACTGAT+TGG + chr8.3:43387564-43387583 MS.gene42977:CDS 40.0%
CCAACAAGTTCTTCATCAGT+TGG - chr8.3:43386611-43386630 None:intergenic 40.0%
CCAACTGATGAAGAACTTGT+TGG + chr8.3:43386608-43386627 MS.gene42977:CDS 40.0%
CTAATAGGGTAACAAGAGCT+GGG + chr8.3:43387441-43387460 MS.gene42977:CDS 40.0%
GAACAGTGCAAGACCTAATA+GGG + chr8.3:43387427-43387446 MS.gene42977:CDS 40.0%
GTATAGAGTTGGCAAGTACA+GGG + chr8.3:43387360-43387379 MS.gene42977:intron 40.0%
TATAGAGTTGGCAAGTACAG+GGG + chr8.3:43387361-43387380 MS.gene42977:intron 40.0%
TCTTGTTGATCATCAACACG+AGG - chr8.3:43388791-43388810 None:intergenic 40.0%
TGATGAGCTCAATAGCAAGA+GGG - chr8.3:43386664-43386683 None:intergenic 40.0%
TGTATAGAGTTGGCAAGTAC+AGG + chr8.3:43387359-43387378 MS.gene42977:intron 40.0%
TTCAGTGTGCCTCTCAATAT+TGG + chr8.3:43388842-43388861 MS.gene42977:CDS 40.0%
TTCCTGTACTTTCTGTCTCT+TGG - chr8.3:43387410-43387429 None:intergenic 40.0%
TTGAAGAGGTTATGCTTCCA+GGG + chr8.3:43386573-43386592 MS.gene42977:CDS 40.0%
TTGATGAGCTCAATAGCAAG+AGG - chr8.3:43386665-43386684 None:intergenic 40.0%
TTTACTTACATTGGCCGGAA+TGG - chr8.3:43387660-43387679 None:intergenic 40.0%
! ATATTGAGAGGCACACTGAA+TGG - chr8.3:43388842-43388861 None:intergenic 40.0%
! GAACCCTCTGAGGAATAAAT+AGG - chr8.3:43387494-43387513 None:intergenic 40.0%
! TATTGAGAGGCACACTGAAT+GGG - chr8.3:43388841-43388860 None:intergenic 40.0%
! TTTTTGTGTGCACCACATGT+GGG + chr8.3:43387926-43387945 MS.gene42977:intron 40.0%
!! ACAATCGGGTCATTTTGGAT+CGG - chr8.3:43388096-43388115 None:intergenic 40.0%
!! CTCTCAATATTGGTGATGCA+TGG + chr8.3:43388852-43388871 MS.gene42977:CDS 40.0%
!! GGAAGTCATCAAGTCTTGTT+TGG + chr8.3:43388873-43388892 MS.gene42977:CDS 40.0%
!! TCAGAGGGTTCTAAGTGTAT+TGG + chr8.3:43387503-43387522 MS.gene42977:CDS 40.0%
!!! CCAATCAGTTTTGACTCCTT+TGG - chr8.3:43387567-43387586 None:intergenic 40.0%
!!! TTTTTTGTGTGCACCACATG+TGG + chr8.3:43387925-43387944 MS.gene42977:intron 40.0%
AGGAATCTTGGGCAATATGC+AGG + chr8.3:43388249-43388268 MS.gene42977:intron 45.0%
AGGTTATGCTTCCAGGGTTT+AGG + chr8.3:43386579-43386598 MS.gene42977:CDS 45.0%
CACACTGAATGGGAATCCAA+TGG - chr8.3:43388831-43388850 None:intergenic 45.0%
CCAGCTCTTGTTACCCTATT+AGG - chr8.3:43387443-43387462 None:intergenic 45.0%
CCTAATAGGGTAACAAGAGC+TGG + chr8.3:43387440-43387459 MS.gene42977:CDS 45.0%
CTTGAAGAGGTTATGCTTCC+AGG + chr8.3:43386572-43386591 MS.gene42977:CDS 45.0%
GGAACAGTGCAAGACCTAAT+AGG + chr8.3:43387426-43387445 MS.gene42977:CDS 45.0%
GTCTTACTTGGTAGATCCCA+TGG - chr8.3:43386713-43386732 None:intergenic 45.0%
GTTGGATGAAACCTAAACCC+TGG - chr8.3:43386593-43386612 None:intergenic 45.0%
! CTAGAGTGACTTGCAAAGCT+AGG - chr8.3:43388422-43388441 None:intergenic 45.0%
! GGGTTCATCAGAAGTACAAG+AGG - chr8.3:43388906-43388925 None:intergenic 45.0%
! GTCCAAGAGACAGAAAGTAC+AGG + chr8.3:43387405-43387424 MS.gene42977:CDS 45.0%
!! AAAGAGCACTCTCTCACTCA+TGG + chr8.3:43388300-43388319 MS.gene42977:CDS 45.0%
!! AAGAGCACTCTCTCACTCAT+GGG + chr8.3:43388301-43388320 MS.gene42977:CDS 45.0%
ATGGATACGGTTCGACCCAT+TGG + chr8.3:43388812-43388831 MS.gene42977:CDS 50.0%
CAAGTACAGGGGAGAAAGAG+TGG + chr8.3:43387372-43387391 MS.gene42977:CDS 50.0%
TACAAAGGCAGAGCTGCCAA+AGG + chr8.3:43387548-43387567 MS.gene42977:CDS 50.0%
TGCACTTAGTCGGATTGAGC+TGG + chr8.3:43387891-43387910 MS.gene42977:intron 50.0%
TGCTCTTTGAGCGGTAGCAT+TGG - chr8.3:43388288-43388307 None:intergenic 50.0%
! GGGTAACAAGAGCTGGGTTT+TGG + chr8.3:43387447-43387466 MS.gene42977:CDS 50.0%
!! GTGAGAGAGTGCTCTTTGAG+CGG - chr8.3:43388297-43388316 None:intergenic 50.0%
!!! GCTGGGTTTTGGAAAGCAAC+AGG + chr8.3:43387458-43387477 MS.gene42977:CDS 50.0%
ACACGAGGCACGTTCGCATT+AGG - chr8.3:43388776-43388795 None:intergenic 55.0%
AGGGTGTAGACACCCACATG+TGG - chr8.3:43387941-43387960 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 43386542 43388958 43386542 ID=MS.gene42977
chr8.3 mRNA 43386542 43388958 43386542 ID=MS.gene42977.t1;Parent=MS.gene42977
chr8.3 exon 43386542 43386725 43386542 ID=MS.gene42977.t1.exon1;Parent=MS.gene42977.t1
chr8.3 CDS 43386542 43386725 43386542 ID=cds.MS.gene42977.t1;Parent=MS.gene42977.t1
chr8.3 exon 43387366 43387670 43387366 ID=MS.gene42977.t1.exon2;Parent=MS.gene42977.t1
chr8.3 CDS 43387366 43387670 43387366 ID=cds.MS.gene42977.t1;Parent=MS.gene42977.t1
chr8.3 exon 43388251 43388958 43388251 ID=MS.gene42977.t1.exon3;Parent=MS.gene42977.t1
chr8.3 CDS 43388251 43388958 43388251 ID=cds.MS.gene42977.t1;Parent=MS.gene42977.t1
Gene Sequence

>MS.gene42977

ATGGAAGAGAGAAATGGTACTTGTGAGAAACTTGAAGAGGTTATGCTTCCAGGGTTTAGGTTTCATCCAACTGATGAAGAACTTGTTGGATTTTACCTGAAGAAAAAAATTCAGCAACACCCTCTTGCTATTGAGCTCATCAAGCAGCTTGATATTTATAAATTTGATCCATGGGATCTACCAAGTAAGACTCATAATAGTGCTTTACTAATACATTATTACCCTAGATGTGTTTATCACTTTGACACATGAAATGTTAGTATCCAGTATTTGACCTCTTTATCACTTTACTTTTTAACTCTCTCAGATCAACCACATCAAGCGAACCTTATATTCCTACCTAGATGTGTAACTTACATATATTTAGAGTCTCTTTCGATTGATTTATTTGAGTTTATTTAGTAGTATAAACACTTATGAAACTATTTAGAAGAGCTTGTGAAAACAATTTCTGACATGTACATAGGTTATTTAAGCTAATTTACATAAACTCTTTTTGATAGCTAAACAGTTTATAGCTTATACGAAAATTGTTTGATTTTATTATATCTTTTGTTATCAAGAAAAAATTATGCAAAAGTGTTATGCTATATATATTGCTTGTTTTTTGAGTTCTTGTTCTATTTGTTGCTCTTGTATTTTGATCTCTTTTTATATAATATATATACTTGTCATTCAAAAAAAATTCTCAAGTATTTATGCTACAGACGCTTAATTAAATTGTTTATCCAAACATCGTACTATAGGTAGTTTTTTGTTAAGACTTTTTGATATCTTGGTACTAATTAAAAATTAATTCTATAGTTCTGATATTTTGTGTATAGAGTTGGCAAGTACAGGGGAGAAAGAGTGGTATTTTTACTGTCCAAGAGACAGAAAGTACAGGAACAGTGCAAGACCTAATAGGGTAACAAGAGCTGGGTTTTGGAAAGCAACAGGAACAGACAGACCTATTTATTCCTCAGAGGGTTCTAAGTGTATTGGCTTGAAAAAATCCTTAGTTTTTTACAAAGGCAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCATAGATTCATCATCATCTCCAAAGAAATATGTAGACAAGACCATTCCGGCCAATGTAAGTAAAATTTACTTCCCAAATCTATATTTAGTTAGAACTTGTTGGTATCATTTGATACATCTTGTTCGAATGGTTATTAACTATATGTTTAGAGCATAATAAAATATAAAAATATATATAAAATTGTGACACATTTGACAAATAATCAAGTAGGTTATAGTATAAGATGAGTAATCAGTAAAGTTATGGTATTTGGATTATTTGGTCTAACCTAAAATGCACTTAGTCGGATTGAGCTGGACTAAGCCTAATTTTTTGTGTGCACCACATGTGGGTGTCTACACCCTTAAAATAGAGTGATGTGATAAATATGATAATTTGATGATATGACAGAAAGTAAGAGATATAGATAAAATGAGATGTTGAATAGATATATAAGAAATTAGGGTTAAAAAATATACTTAATATGATCAAACGTGCCGATCCAAAATGACCCGATTGTTTTCTGGTCAAATGATATGATACATTTGATTTGAGTTCCACTTGTTAAAAAAATAATTACATTATATTATATTCTATATGTAACTTCATTTTGAAGTGTTTGACTGACTAATATTAAATGCTATTCAACTTGTAGGAATCTTGGGCAATATGCAGGATATTCAAGAAAACCAATGCTACCGCTCAAAGAGCACTCTCTCACTCATGGGTCCCTCCTTTACTTGAAACATCAACCTCTAATGTTCTAACAAATGATGCAAACCACAACCAATTTTGTTCCTCAAACATGATGTTAACAAAGAAACCTAGCTTTGCAAGTCACTCTAGTACTACCACTAATAACCACAATAACCTAACACAACACTTAACCTCTTCTAGTAGTACTACACTTTGTCCCTTAGATGTTCCATCTTATAATAATCCAATTATTGATCCATTGATTTACAAACCCTTATACCGGTTACCAATTTCAAATGATCAAGATCTTAACCTTAGCACTGGCTTAGTATTTTCATCTCCTCTTGAAACATCTTGTAACAAAACTTCAATGGATTTTTCATCTTTGCTATTAGGTATGTCATCTGAAGTAACAACTTCTAACTACATTGGTAATTTACAAGACCATTACAATAATGGGTATCCATTAATGGCTAACATTCCTAATGCGAACGTGCCTCGTGTTGATGATCAACAAGAGATGGATACGGTTCGACCCATTGGATTCCCATTCAGTGTGCCTCTCAATATTGGTGATGCATGGAAGTCATCAAGTCTTGTTTGGGATACTTCCTCTTGTACTTCTGATGAACCCTCTAGTTATTCTACTACCAAGTGTTATACTTAG
Protein sequence

>MS.gene42977.t1

MEERNGTCEKLEEVMLPGFRFHPTDEELVGFYLKKKIQQHPLAIELIKQLDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLIDSSSSPKKYVDKTIPANESWAICRIFKKTNATAQRALSHSWVPPLLETSTSNVLTNDANHNQFCSSNMMLTKKPSFASHSSTTTNNHNNLTQHLTSSSSTTLCPLDVPSYNNPIIDPLIYKPLYRLPISNDQDLNLSTGLVFSSPLETSCNKTSMDFSSLLLGMSSEVTTSNYIGNLQDHYNNGYPLMANIPNANVPRVDDQQEMDTVRPIGFPFSVPLNIGDAWKSSSLVWDTSSCTSDEPSSYSTTKCYT