Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43471.t1 | Q40359.1 | 99.6 | 257 | 1 | 0 | 1 | 257 | 1 | 257 | 3.20E-140 | 507.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43471.t1 | Q40359 | 99.6 | 257 | 1 | 0 | 1 | 257 | 1 | 257 | 7.7e-143 | 507.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43471.t1 | A0A072UTR5 | 98.8 | 257 | 2 | 1 | 1 | 257 | 1 | 256 | 3.0e-140 | 507.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene43471.t1 | TF | Alfin-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43471.t1 | MTR_4g134510 | 99.611 | 257 | 0 | 1 | 1 | 257 | 1 | 256 | 0.0 | 532 |
| MS.gene43471.t1 | MTR_8g019520 | 71.311 | 244 | 70 | 0 | 10 | 253 | 9 | 252 | 4.33e-111 | 320 |
| MS.gene43471.t1 | MTR_8g019520 | 69.796 | 245 | 73 | 1 | 10 | 253 | 9 | 253 | 4.58e-111 | 320 |
| MS.gene43471.t1 | MTR_1g015185 | 67.589 | 253 | 75 | 2 | 10 | 255 | 10 | 262 | 3.77e-105 | 305 |
| MS.gene43471.t1 | MTR_2g040990 | 68.548 | 248 | 69 | 4 | 10 | 255 | 12 | 252 | 2.24e-104 | 303 |
| MS.gene43471.t1 | MTR_2g099500 | 67.194 | 253 | 77 | 2 | 1 | 253 | 1 | 247 | 3.25e-103 | 300 |
| MS.gene43471.t1 | MTR_7g068590 | 62.302 | 252 | 84 | 5 | 4 | 255 | 1 | 241 | 1.73e-93 | 275 |
| MS.gene43471.t1 | MTR_4g015830 | 62.302 | 252 | 82 | 6 | 4 | 255 | 1 | 239 | 7.22e-92 | 271 |
| MS.gene43471.t1 | MTR_1g015185 | 84.444 | 135 | 21 | 0 | 10 | 144 | 10 | 144 | 7.83e-72 | 219 |
| MS.gene43471.t1 | MTR_8g066480 | 41.912 | 136 | 59 | 3 | 121 | 255 | 29 | 145 | 3.73e-19 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43471.t1 | AT2G02470 | 79.151 | 259 | 46 | 5 | 1 | 255 | 1 | 255 | 3.38e-130 | 369 |
| MS.gene43471.t1 | AT1G14510 | 78.656 | 253 | 49 | 3 | 1 | 253 | 1 | 248 | 5.05e-128 | 363 |
| MS.gene43471.t1 | AT2G02470 | 76.744 | 258 | 45 | 5 | 1 | 255 | 1 | 246 | 4.23e-124 | 353 |
| MS.gene43471.t1 | AT5G20510 | 67.568 | 259 | 80 | 3 | 1 | 255 | 1 | 259 | 8.47e-112 | 322 |
| MS.gene43471.t1 | AT3G42790 | 66.275 | 255 | 80 | 3 | 1 | 255 | 1 | 249 | 1.02e-108 | 314 |
| MS.gene43471.t1 | AT5G05610 | 63.347 | 251 | 79 | 5 | 5 | 255 | 3 | 240 | 1.67e-95 | 280 |
| MS.gene43471.t1 | AT5G05610 | 63.347 | 251 | 79 | 5 | 5 | 255 | 3 | 240 | 1.67e-95 | 280 |
| MS.gene43471.t1 | AT5G26210 | 67.331 | 251 | 72 | 3 | 10 | 255 | 9 | 254 | 5.03e-93 | 275 |
| MS.gene43471.t1 | AT3G11200 | 63.137 | 255 | 84 | 4 | 1 | 255 | 1 | 245 | 7.37e-89 | 263 |
| MS.gene43471.t1 | AT5G20510 | 66.512 | 215 | 68 | 3 | 45 | 255 | 4 | 218 | 5.49e-86 | 255 |
| MS.gene43471.t1 | AT2G02470 | 82.927 | 164 | 24 | 3 | 1 | 164 | 1 | 160 | 2.61e-85 | 255 |
| MS.gene43471.t1 | AT5G20510 | 73.171 | 164 | 42 | 2 | 1 | 162 | 1 | 164 | 2.86e-75 | 227 |
| MS.gene43471.t1 | AT3G11200 | 62.844 | 218 | 71 | 4 | 38 | 255 | 25 | 232 | 6.53e-75 | 228 |
Find 75 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGCTGTTGCTTTCTATTT+TGG | 0.091188 | 8.4:-327834 | MS.gene43471:CDS |
| AAGGAGAATTTGTGCCTCTA+TGG | 0.272744 | 8.4:-328008 | MS.gene43471:CDS |
| GTTCAGAGCTATCCAATTCT+TGG | 0.273239 | 8.4:+325547 | None:intergenic |
| ATTATGGCACCGATGAATTC+TGG | 0.291624 | 8.4:-325681 | MS.gene43471:CDS |
| TTCACTTCCCATGTTTCATT+TGG | 0.302703 | 8.4:+327981 | None:intergenic |
| TTTGGTGCCCGCTTTGGATT+TGG | 0.319624 | 8.4:-327816 | MS.gene43471:CDS |
| TTGGATTTGGTAAGAATGAT+AGG | 0.350809 | 8.4:-327803 | MS.gene43471:intron |
| TCTTCAACAGTTCGAGGTAC+TGG | 0.366061 | 8.4:+328902 | None:intergenic |
| ACATCTTCACACCCTTGGTC+TGG | 0.386000 | 8.4:+325794 | None:intergenic |
| TCAGGAGGCACTTCCTCAAC+AGG | 0.419078 | 8.4:+327954 | None:intergenic |
| ACAGTCTTTGAGCTTGCAAC+AGG | 0.426181 | 8.4:-326011 | MS.gene43471:CDS |
| GGTGCTTGTGGTGATAATTA+TGG | 0.428882 | 8.4:-325697 | MS.gene43471:CDS |
| CATTGGGTATAAACTTTGCT+CGG | 0.446703 | 8.4:-327917 | MS.gene43471:CDS |
| AGTATCAAGAAGCCAAGAAT+TGG | 0.452358 | 8.4:-325559 | MS.gene43471:CDS |
| AAAACTTCTTCAACAGTTCG+AGG | 0.455840 | 8.4:+328896 | None:intergenic |
| AATGCTGGCTCGGGAAGTTC+AGG | 0.456279 | 8.4:+327936 | None:intergenic |
| CTGTCAACCTCTTCTTTGAC+CGG | 0.460633 | 8.4:+325766 | None:intergenic |
| GGCTTCTTGATACTGCAGCC+AGG | 0.465655 | 8.4:+325568 | None:intergenic |
| TGAACTTCCCGAGCCAGCAT+TGG | 0.471886 | 8.4:-327934 | MS.gene43471:CDS |
| GTTTATACCCAATGCTGGCT+CGG | 0.475497 | 8.4:+327926 | None:intergenic |
| CTTTGCTCGGGATGGAATGC+AGG | 0.478727 | 8.4:-327904 | MS.gene43471:CDS |
| GGTTGACAGTGGAGAAGAAG+AGG | 0.483798 | 8.4:-325752 | MS.gene43471:CDS |
| TGCAGACATCTTCACACCCT+TGG | 0.486335 | 8.4:+325789 | None:intergenic |
| CATCTTCACACCCTTGGTCT+GGG | 0.494259 | 8.4:+325795 | None:intergenic |
| AGGAGAATTTGTGCCTCTAT+GGG | 0.495200 | 8.4:-328007 | MS.gene43471:CDS |
| GAACTTCCCGAGCCAGCATT+GGG | 0.495975 | 8.4:-327933 | MS.gene43471:CDS |
| TTGATGTGTTCAGCCTTGGC+AGG | 0.497341 | 8.4:+325604 | None:intergenic |
| CTTCAACAGTTCGAGGTACT+GGG | 0.497593 | 8.4:+328903 | None:intergenic |
| TTGATCAAAGCTCTCACTAC+TGG | 0.498155 | 8.4:-328845 | MS.gene43471:intron |
| ACTAACCGGGATCGCAAAGC+TGG | 0.500026 | 8.4:+328733 | None:intergenic |
| GGTATAAACTTTGCTCGGGA+TGG | 0.501826 | 8.4:-327912 | MS.gene43471:CDS |
| TTGCTTGATGTGTTCAGCCT+TGG | 0.502589 | 8.4:+325600 | None:intergenic |
| TTTATACCCAATGCTGGCTC+GGG | 0.504159 | 8.4:+327927 | None:intergenic |
| ATTGGGTATAAACTTTGCTC+GGG | 0.520391 | 8.4:-327916 | MS.gene43471:CDS |
| AGTGAGAGCTTTGATCAAAC+CGG | 0.520678 | 8.4:+328850 | None:intergenic |
| CATTGTTGTGAGCAGTCAGT+TGG | 0.529254 | 8.4:+325967 | None:intergenic |
| GCTTCTTGATACTGCAGCCA+GGG | 0.530817 | 8.4:+325569 | None:intergenic |
| AAATTGAAATTGAGGATGGA+AGG | 0.531943 | 8.4:-328938 | None:intergenic |
| GAAATTGAGGATGGAAGGAA+TGG | 0.537738 | 8.4:-328933 | None:intergenic |
| CCTTGGTCTGGGATTCAGAC+TGG | 0.538724 | 8.4:+325806 | None:intergenic |
| TTGCAGTTCACAGTGACTCA+TGG | 0.543636 | 8.4:-327860 | MS.gene43471:CDS |
| GTTGTGATATGTGCGAGAAA+TGG | 0.560529 | 8.4:-325654 | MS.gene43471:CDS |
| TTTCATTTGGAAACCCATAG+AGG | 0.561848 | 8.4:+327994 | None:intergenic |
| GCAAAGTTTATACCCAATGC+TGG | 0.563847 | 8.4:+327921 | None:intergenic |
| GGAGAAGGACTGGTTATCAC+TGG | 0.565404 | 8.4:-327883 | MS.gene43471:CDS |
| TCGGGATGGAATGCAGGAGA+AGG | 0.567649 | 8.4:-327898 | MS.gene43471:CDS |
| ATGGGTTTCCAAATGAAACA+TGG | 0.572525 | 8.4:-327989 | MS.gene43471:CDS |
| ATTATCACCACAAGCACCAC+AGG | 0.573675 | 8.4:+325702 | None:intergenic |
| ATCAAGCAATACAAGTGCCC+TGG | 0.578416 | 8.4:-325586 | MS.gene43471:CDS |
| GGTCTGGGATTCAGACTGGC+GGG | 0.580455 | 8.4:+325810 | None:intergenic |
| TGTTAAAATTACTCCTGCCA+AGG | 0.581201 | 8.4:-325617 | MS.gene43471:CDS |
| ATGGAATGCAGGAGAAGGAC+TGG | 0.581252 | 8.4:-327893 | MS.gene43471:CDS |
| CAAATACAAATCAAGTGGAA+AGG | 0.584281 | 8.4:-325934 | MS.gene43471:intron |
| TGTTGCAAGCTCAAAGACTG+TGG | 0.590482 | 8.4:+326013 | None:intergenic |
| ATTCTTACCAAATCCAAAGC+GGG | 0.591224 | 8.4:+327809 | None:intergenic |
| AATAGCAAATACAAATCAAG+TGG | 0.591787 | 8.4:-325939 | MS.gene43471:CDS |
| GTCTGCACCGGTCAAAGAAG+AGG | 0.597402 | 8.4:-325773 | MS.gene43471:CDS |
| TGGTCTGGGATTCAGACTGG+CGG | 0.601563 | 8.4:+325809 | None:intergenic |
| GGGTGTGAAGATGTCTGCAC+CGG | 0.601595 | 8.4:-325785 | MS.gene43471:CDS |
| TGGGTTTCCAAATGAAACAT+GGG | 0.604798 | 8.4:-327988 | MS.gene43471:CDS |
| GATTACAAAGGCAGACGCGC+CGG | 0.610248 | 8.4:-328869 | MS.gene43471:CDS |
| GGTGCAACCTGTGGTGCTTG+TGG | 0.611921 | 8.4:-325709 | MS.gene43471:CDS |
| GTTGCAAGCTCAAAGACTGT+GGG | 0.616342 | 8.4:+326014 | None:intergenic |
| GGAAGTGAACTTGCCTGTTG+AGG | 0.623158 | 8.4:-327967 | MS.gene43471:CDS |
| AGGAACTGCTAAGCAATCAA+AGG | 0.625294 | 8.4:-325991 | MS.gene43471:CDS |
| ATGTGCGAGAAATGGTTCCA+TGG | 0.628526 | 8.4:-325646 | MS.gene43471:CDS |
| CAGTCTGAATCCCAGACCAA+GGG | 0.635249 | 8.4:-325805 | MS.gene43471:CDS |
| ACAACAGATCCAGAATTCAT+CGG | 0.639218 | 8.4:+325672 | None:intergenic |
| CCAGTCTGAATCCCAGACCA+AGG | 0.643258 | 8.4:-325806 | MS.gene43471:CDS |
| CAACTGACTGCTCACAACAA+TGG | 0.646947 | 8.4:-325966 | MS.gene43471:CDS |
| GCTGGCTCGGGAAGTTCAGG+AGG | 0.654216 | 8.4:+327939 | None:intergenic |
| GTCAAAGAAGAGGTTGACAG+TGG | 0.669063 | 8.4:-325763 | MS.gene43471:CDS |
| GAAGAAGATGATGATGAACA+AGG | 0.695245 | 8.4:-325730 | MS.gene43471:CDS |
| GATGAACAAGGTGCAACCTG+TGG | 0.715909 | 8.4:-325718 | MS.gene43471:CDS |
| CATTCTTACCAAATCCAAAG+CGG | 0.722080 | 8.4:+327808 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGAAAAAAAGAAAAAA+AGG | + | chr8.4:325846-325865 | None:intergenic | 10.0% |
| !! | CATAAAATAAAAATATGAAA+TGG | + | chr8.4:328581-328600 | None:intergenic | 10.0% |
| !!! | TTTAAACAATAACTTTTTAT+GGG | + | chr8.4:326405-326424 | None:intergenic | 10.0% |
| !! | TAAGCAAAAAAGTAAAAAAA+TGG | - | chr8.4:327220-327239 | MS.gene43471:intron | 15.0% |
| !!! | CTTTAAACAATAACTTTTTA+TGG | + | chr8.4:326406-326425 | None:intergenic | 15.0% |
| !!! | TATTTCTTTTGCAAAATAAT+TGG | - | chr8.4:328239-328258 | MS.gene43471:intron | 15.0% |
| !! | AGAATAATGATTAGTGTAAT+TGG | - | chr8.4:327618-327637 | MS.gene43471:intron | 20.0% |
| !! | TGTACGTGATATTAATATTT+AGG | - | chr8.4:328373-328392 | MS.gene43471:intron | 20.0% |
| !! | TTTAGGGAAATTTAGTTATA+TGG | - | chr8.4:327970-327989 | MS.gene43471:CDS | 20.0% |
| !! | TTTATCACAAAACAACAAAA+AGG | - | chr8.4:327250-327269 | MS.gene43471:intron | 20.0% |
| !!! | TAATTTTAACACATTTACCA+TGG | + | chr8.4:328852-328871 | None:intergenic | 20.0% |
| !!! | TTAGGATTTTCATCTAATTT+TGG | - | chr8.4:328391-328410 | MS.gene43471:intron | 20.0% |
| ! | AAATGGTTATTTACAGGAAA+AGG | - | chr8.4:328417-328436 | MS.gene43471:intron | 25.0% |
| ! | AATAAGAGGACAAAACAAAA+TGG | + | chr8.4:326112-326131 | None:intergenic | 25.0% |
| ! | AATAGCAAATACAAATCAAG+TGG | - | chr8.4:328539-328558 | MS.gene43471:intron | 25.0% |
| ! | AGGGATAAAAGAAAAACTTT+AGG | - | chr8.4:327939-327958 | MS.gene43471:CDS | 25.0% |
| ! | AGTATATATCTCAAAGATGA+CGG | + | chr8.4:328116-328135 | None:intergenic | 25.0% |
| ! | ATAAAACCAATAATGCCATA+TGG | - | chr8.4:327682-327701 | MS.gene43471:intron | 25.0% |
| ! | GGTTGAAAATGAAAAAACAA+GGG | + | chr8.4:327276-327295 | None:intergenic | 25.0% |
| ! | TAAAACCAATAATGCCATAT+GGG | - | chr8.4:327683-327702 | MS.gene43471:intron | 25.0% |
| ! | TACAACACAAAAATCAACAT+GGG | - | chr8.4:327029-327048 | MS.gene43471:intron | 25.0% |
| ! | TCAAAAAGCCATATTTCTTA+AGG | - | chr8.4:328293-328312 | MS.gene43471:intron | 25.0% |
| ! | TGGTTGAAAATGAAAAAACA+AGG | + | chr8.4:327277-327296 | None:intergenic | 25.0% |
| ! | TGTAGACAAACATGAAAAAT+TGG | - | chr8.4:326886-326905 | MS.gene43471:intron | 25.0% |
| ! | TTACAACACAAAAATCAACA+TGG | - | chr8.4:327028-327047 | MS.gene43471:intron | 25.0% |
| ! | TTTGCAAAATAATTGGCATA+GGG | - | chr8.4:328246-328265 | MS.gene43471:intron | 25.0% |
| !! | AATGAAGGTATATTGGTAAT+AGG | + | chr8.4:326153-326172 | None:intergenic | 25.0% |
| !! | TTTATGGGTTTTTCCTATTT+GGG | + | chr8.4:326390-326409 | None:intergenic | 25.0% |
| !! | TTTTATGGGTTTTTCCTATT+TGG | + | chr8.4:326391-326410 | None:intergenic | 25.0% |
| !! | TTTTGCAAAATAATTGGCAT+AGG | - | chr8.4:328245-328264 | MS.gene43471:intron | 25.0% |
| !!! | AAAATTGTAGCATTTTAAGG+CGG | + | chr8.4:326039-326058 | None:intergenic | 25.0% |
| !!! | AAAGATGACGGATTAAAATT+GGG | + | chr8.4:328104-328123 | None:intergenic | 25.0% |
| !!! | ATTATCATCTCTAAAACACT+CGG | + | chr8.4:327747-327766 | None:intergenic | 25.0% |
| !!! | TATGGCATTATTGGTTTTAT+AGG | + | chr8.4:327682-327701 | None:intergenic | 25.0% |
| !!! | TCATCTAATTTTGGTTGAAA+TGG | - | chr8.4:328400-328419 | MS.gene43471:intron | 25.0% |
| AACTTTAGGTCAACTCATTT+AGG | - | chr8.4:327953-327972 | MS.gene43471:CDS | 30.0% | |
| AAGAAAAAAAGGAAAACCCT+AGG | + | chr8.4:325835-325854 | None:intergenic | 30.0% | |
| AATCCATAACTTTCTCAACA+AGG | + | chr8.4:326996-327015 | None:intergenic | 30.0% | |
| AATGCATATTGCTAGAAATC+TGG | - | chr8.4:328330-328349 | MS.gene43471:intron | 30.0% | |
| ACTTTAGGTCAACTCATTTA+GGG | - | chr8.4:327954-327973 | MS.gene43471:CDS | 30.0% | |
| ATCCATAACTTTCTCAACAA+GGG | + | chr8.4:326995-327014 | None:intergenic | 30.0% | |
| ATCGAATGTACAAAATGATG+GGG | - | chr8.4:327547-327566 | MS.gene43471:intron | 30.0% | |
| ATGAGTGGTTACATAAGATT+AGG | - | chr8.4:327776-327795 | MS.gene43471:intron | 30.0% | |
| ATGATAGTCCAATCAAGAAT+TGG | - | chr8.4:328204-328223 | MS.gene43471:intron | 30.0% | |
| ATGATTAGTGTAATTGGCAT+TGG | - | chr8.4:327624-327643 | MS.gene43471:intron | 30.0% | |
| ATGCTTAAAAAATGTGGCAT+GGG | + | chr8.4:325994-326013 | None:intergenic | 30.0% | |
| CAAATACAAATCAAGTGGAA+AGG | - | chr8.4:328544-328563 | MS.gene43471:intron | 30.0% | |
| CAGAAGTCAAAAACTATACA+TGG | + | chr8.4:327297-327316 | None:intergenic | 30.0% | |
| CCAACTTCAAAAGATAACAA+AGG | + | chr8.4:326227-326246 | None:intergenic | 30.0% | |
| CCATGTTATTCAAAACTATG+TGG | + | chr8.4:327527-327546 | None:intergenic | 30.0% | |
| CTTATTCTTTCTCATGACTA+TGG | - | chr8.4:327068-327087 | MS.gene43471:intron | 30.0% | |
| GAGTCATTGTCAATTGTATA+GGG | + | chr8.4:328169-328188 | None:intergenic | 30.0% | |
| GATAATGTTACAATGATGAG+TGG | - | chr8.4:327761-327780 | MS.gene43471:intron | 30.0% | |
| GATCGAATGTACAAAATGAT+GGG | - | chr8.4:327546-327565 | MS.gene43471:intron | 30.0% | |
| TGAGTCATTGTCAATTGTAT+AGG | + | chr8.4:328170-328189 | None:intergenic | 30.0% | |
| TGATAGTCCAATCAAGAATT+GGG | - | chr8.4:328205-328224 | MS.gene43471:intron | 30.0% | |
| TGGTTACATAAGATTAGGAA+AGG | - | chr8.4:327781-327800 | MS.gene43471:intron | 30.0% | |
| TGGTTGAAATGGTTATTTAC+AGG | - | chr8.4:328411-328430 | MS.gene43471:intron | 30.0% | |
| TGTCAATTGTATAGGGAAAA+GGG | + | chr8.4:328162-328181 | None:intergenic | 30.0% | |
| TTACATAAGATTAGGAAAGG+TGG | - | chr8.4:327784-327803 | MS.gene43471:intron | 30.0% | |
| TTGTCAATTGTATAGGGAAA+AGG | + | chr8.4:328163-328182 | None:intergenic | 30.0% | |
| TTTCTCTCTTCAATAGACTT+TGG | - | chr8.4:327451-327470 | MS.gene43471:intron | 30.0% | |
| ! | AGCACTGAATTGAAAATAAG+AGG | + | chr8.4:326126-326145 | None:intergenic | 30.0% |
| ! | ATGATTTGCAAACATGGATT+AGG | + | chr8.4:326268-326287 | None:intergenic | 30.0% |
| ! | ATGTATACAAAGAGTGTGTA+TGG | + | chr8.4:325911-325930 | None:intergenic | 30.0% |
| ! | CAAAAGATGATTTGCAAACA+TGG | + | chr8.4:326274-326293 | None:intergenic | 30.0% |
| ! | GCCAAAATTGTAGCATTTTA+AGG | + | chr8.4:326042-326061 | None:intergenic | 30.0% |
| ! | GCCTTAAAATGCTACAATTT+TGG | - | chr8.4:326038-326057 | MS.gene43471:CDS | 30.0% |
| ! | TAAGAGCATAGCAGAAAATA+AGG | + | chr8.4:325810-325829 | None:intergenic | 30.0% |
| ! | TTGGATTTGGTAAGAATGAT+AGG | - | chr8.4:326675-326694 | MS.gene43471:intron | 30.0% |
| !! | AAGATGACGGATTAAAATTG+GGG | + | chr8.4:328103-328122 | None:intergenic | 30.0% |
| !! | CAAAGATGACGGATTAAAAT+TGG | + | chr8.4:328105-328124 | None:intergenic | 30.0% |
| !! | GTTGTTTTGTGATAAAAACG+AGG | + | chr8.4:327246-327265 | None:intergenic | 30.0% |
| !!! | CCACATAGTTTTGAATAACA+TGG | - | chr8.4:327524-327543 | MS.gene43471:intron | 30.0% |
| !!! | CCTTTGTTATCTTTTGAAGT+TGG | - | chr8.4:326224-326243 | MS.gene43471:intron | 30.0% |
| !!! | GAAGTTTTTAGCGATTACAA+AGG | - | chr8.4:325597-325616 | MS.gene43471:CDS | 30.0% |
| AAAACTTCTTCAACAGTTCG+AGG | + | chr8.4:325585-325604 | None:intergenic | 35.0% | |
| ACAACAGATCCAGAATTCAT+CGG | + | chr8.4:328809-328828 | None:intergenic | 35.0% | |
| ACTTTGGTACTATAGCATGT+TGG | - | chr8.4:327467-327486 | MS.gene43471:intron | 35.0% | |
| AGCCATTATAGGTCTATTGT+TGG | - | chr8.4:328045-328064 | MS.gene43471:intron | 35.0% | |
| AGTATCAAGAAGCCAAGAAT+TGG | - | chr8.4:328919-328938 | MS.gene43471:CDS | 35.0% | |
| AGTCTATTGAAGAGAGAAAC+AGG | + | chr8.4:327450-327469 | None:intergenic | 35.0% | |
| ATCAATCACAGGATCTTTGT+AGG | - | chr8.4:327584-327603 | MS.gene43471:intron | 35.0% | |
| ATGGGTTTCCAAATGAAACA+TGG | - | chr8.4:326489-326508 | MS.gene43471:intron | 35.0% | |
| ATTCTTACCAAATCCAAAGC+GGG | + | chr8.4:326672-326691 | None:intergenic | 35.0% | |
| ATTCTTTCTCATGACTATGG+AGG | - | chr8.4:327071-327090 | MS.gene43471:intron | 35.0% | |
| ATTGGGTATAAACTTTGCTC+GGG | - | chr8.4:326562-326581 | MS.gene43471:intron | 35.0% | |
| CAATATGCATTCTCTTGTTG+AGG | + | chr8.4:328321-328340 | None:intergenic | 35.0% | |
| CATGCTTAAAAAATGTGGCA+TGG | + | chr8.4:325995-326014 | None:intergenic | 35.0% | |
| CATTCTTACCAAATCCAAAG+CGG | + | chr8.4:326673-326692 | None:intergenic | 35.0% | |
| CATTGGGTATAAACTTTGCT+CGG | - | chr8.4:326561-326580 | MS.gene43471:intron | 35.0% | |
| CCACAATCAATAACAACCTA+TGG | - | chr8.4:326065-326084 | MS.gene43471:intron | 35.0% | |
| CTCATTGACAATTGCAGAAA+AGG | - | chr8.4:326451-326470 | MS.gene43471:intron | 35.0% | |
| CTTAGTAGCATGCTCATAAA+TGG | - | chr8.4:326931-326950 | MS.gene43471:intron | 35.0% | |
| CTTTGGTACTATAGCATGTT+GGG | - | chr8.4:327468-327487 | MS.gene43471:intron | 35.0% | |
| GATAGTCCAATCAAGAATTG+GGG | - | chr8.4:328206-328225 | MS.gene43471:intron | 35.0% | |
| GGATCGAATGTACAAAATGA+TGG | - | chr8.4:327545-327564 | MS.gene43471:intron | 35.0% | |
| GTCTATTGAAGAGAGAAACA+GGG | + | chr8.4:327449-327468 | None:intergenic | 35.0% | |
| TCCATAACTTTCTCAACAAG+GGG | + | chr8.4:326994-327013 | None:intergenic | 35.0% | |
| TCTACACTCAAAACCACTTA+AGG | + | chr8.4:327820-327839 | None:intergenic | 35.0% | |
| TCTATTGAAGAGAGAAACAG+GGG | + | chr8.4:327448-327467 | None:intergenic | 35.0% | |
| TCTGTGCTTCACAAAATGTT+GGG | - | chr8.4:327095-327114 | MS.gene43471:intron | 35.0% | |
| TGAACTTCTTTGATGCATCT+AGG | - | chr8.4:326711-326730 | MS.gene43471:intron | 35.0% | |
| TGCCAACAATAGACCTATAA+TGG | + | chr8.4:328050-328069 | None:intergenic | 35.0% | |
| TGCTTAAAAAATGTGGCATG+GGG | + | chr8.4:325993-326012 | None:intergenic | 35.0% | |
| TGGGTTTCCAAATGAAACAT+GGG | - | chr8.4:326490-326509 | MS.gene43471:intron | 35.0% | |
| TGTTAAAATTACTCCTGCCA+AGG | - | chr8.4:328861-328880 | MS.gene43471:CDS | 35.0% | |
| TTCACTTCCCATGTTTCATT+TGG | + | chr8.4:326500-326519 | None:intergenic | 35.0% | |
| TTCTGTGCTTCACAAAATGT+TGG | - | chr8.4:327094-327113 | MS.gene43471:intron | 35.0% | |
| TTGAGGCTCCTTAAGAAATA+TGG | + | chr8.4:328304-328323 | None:intergenic | 35.0% | |
| TTTAATTGGATACGGTGAGA+AGG | + | chr8.4:326177-326196 | None:intergenic | 35.0% | |
| TTTCATTTGGAAACCCATAG+AGG | + | chr8.4:326487-326506 | None:intergenic | 35.0% | |
| ! | AGAAGGCAATGAAGGTATAT+TGG | + | chr8.4:326160-326179 | None:intergenic | 35.0% |
| ! | AGGTTGTTATTGATTGTGGA+TGG | + | chr8.4:326064-326083 | None:intergenic | 35.0% |
| ! | ATTTTGTCACACAGAGTACA+GGG | + | chr8.4:327415-327434 | None:intergenic | 35.0% |
| ! | CCATAGGTTGTTATTGATTG+TGG | + | chr8.4:326068-326087 | None:intergenic | 35.0% |
| ! | GAAGAAGATGATGATGAACA+AGG | - | chr8.4:328748-328767 | MS.gene43471:CDS | 35.0% |
| !! | TTAAAAGGAAGCATCCAAAC+AGG | + | chr8.4:328644-328663 | None:intergenic | 35.0% |
| AAGGAGAATTTGTGCCTCTA+TGG | - | chr8.4:326470-326489 | MS.gene43471:intron | 40.0% | |
| AATCTGCTTCTTGCAAATGC+AGG | + | chr8.4:328080-328099 | None:intergenic | 40.0% | |
| AATGCCATATGGGACTACAT+AGG | - | chr8.4:327693-327712 | MS.gene43471:intron | 40.0% | |
| ACATCTCCCCAATTCTTGAT+TGG | + | chr8.4:328215-328234 | None:intergenic | 40.0% | |
| ACGAGTGAATTCCATATGCA+TGG | + | chr8.4:328616-328635 | None:intergenic | 40.0% | |
| AGAGAAATTGCGGAGAAGAT+GGG | - | chr8.4:327183-327202 | MS.gene43471:intron | 40.0% | |
| AGGAACTGCTAAGCAATCAA+AGG | - | chr8.4:328487-328506 | MS.gene43471:intron | 40.0% | |
| AGGAGAATTTGTGCCTCTAT+GGG | - | chr8.4:326471-326490 | MS.gene43471:intron | 40.0% | |
| AGTTGCAGTTGATCATCCAT+AGG | + | chr8.4:326084-326103 | None:intergenic | 40.0% | |
| ATAGGGAAAAGGGATCCAAT+GGG | + | chr8.4:328152-328171 | None:intergenic | 40.0% | |
| ATCACAGGATCTTTGTAGGA+TGG | - | chr8.4:327588-327607 | MS.gene43471:intron | 40.0% | |
| ATGCCATATGGGACTACATA+GGG | - | chr8.4:327694-327713 | MS.gene43471:intron | 40.0% | |
| ATTCTGATGCTCAAGGTAGA+GGG | - | chr8.4:327920-327939 | MS.gene43471:CDS | 40.0% | |
| ATTCTTGCCTCAAGTGCTTT+GGG | - | chr8.4:327851-327870 | MS.gene43471:CDS | 40.0% | |
| CAAAACTATGTGGCCAATGA+TGG | + | chr8.4:327517-327536 | None:intergenic | 40.0% | |
| CAAAATAATTGGCATAGGGC+AGG | - | chr8.4:328250-328269 | MS.gene43471:intron | 40.0% | |
| CAAAGAGAAAAACGACAGAC+CGG | + | chr8.4:326204-326223 | None:intergenic | 40.0% | |
| CAAAGATCCTGTGATTGATG+TGG | + | chr8.4:327583-327602 | None:intergenic | 40.0% | |
| CCATAACTTTCTCAACAAGG+GGG | + | chr8.4:326993-327012 | None:intergenic | 40.0% | |
| CCGGTGAGTTTAATTGGATA+CGG | + | chr8.4:326185-326204 | None:intergenic | 40.0% | |
| CCGTATCCAATTAAACTCAC+CGG | - | chr8.4:326182-326201 | MS.gene43471:intron | 40.0% | |
| CTGTGCTTCACAAAATGTTG+GGG | - | chr8.4:327096-327115 | MS.gene43471:intron | 40.0% | |
| CTTCTTGCAAATGCAGGATA+AGG | + | chr8.4:328074-328093 | None:intergenic | 40.0% | |
| GAGGAATGGTAGAGAAATTG+CGG | - | chr8.4:327173-327192 | MS.gene43471:intron | 40.0% | |
| GCAAAGTTTATACCCAATGC+TGG | + | chr8.4:326560-326579 | None:intergenic | 40.0% | |
| GCCAGCATGCTTAAAAAATG+TGG | + | chr8.4:326000-326019 | None:intergenic | 40.0% | |
| GGTGCTTGTGGTGATAATTA+TGG | - | chr8.4:328781-328800 | MS.gene43471:intron | 40.0% | |
| GTAGTCCCATATGGCATTAT+TGG | + | chr8.4:327691-327710 | None:intergenic | 40.0% | |
| GTGAAGAACAGAGAACTAAC+CGG | + | chr8.4:325762-325781 | None:intergenic | 40.0% | |
| GTTGTGATATGTGCGAGAAA+TGG | - | chr8.4:328824-328843 | MS.gene43471:intron | 40.0% | |
| TAGAGAAATTGCGGAGAAGA+TGG | - | chr8.4:327182-327201 | MS.gene43471:intron | 40.0% | |
| TAGATGACCACATCAATCAC+AGG | - | chr8.4:327573-327592 | MS.gene43471:intron | 40.0% | |
| TAGCTAAAATCACGGAGGAA+TGG | - | chr8.4:327159-327178 | MS.gene43471:intron | 40.0% | |
| TATAGGGAAAAGGGATCCAA+TGG | + | chr8.4:328153-328172 | None:intergenic | 40.0% | |
| TATGCTACGCTAACCATCAT+TGG | - | chr8.4:327501-327520 | MS.gene43471:intron | 40.0% | |
| TCTGCAAGAGAAAGAGAAGA+AGG | + | chr8.4:325710-325729 | None:intergenic | 40.0% | |
| TGAAGAACAGAGAACTAACC+GGG | + | chr8.4:325761-325780 | None:intergenic | 40.0% | |
| TGATGGTTAGCGTAGCATAA+TGG | + | chr8.4:327500-327519 | None:intergenic | 40.0% | |
| TTCTATCACTGCCATGCATA+TGG | - | chr8.4:328602-328621 | MS.gene43471:intron | 40.0% | |
| TTGATCAAAGCTCTCACTAC+TGG | - | chr8.4:325633-325652 | MS.gene43471:CDS | 40.0% | |
| ! | AGTGAGAGCTTTGATCAAAC+CGG | + | chr8.4:325631-325650 | None:intergenic | 40.0% |
| ! | ATTAAAAGCGCAGAGACAGA+CGG | + | chr8.4:325784-325803 | None:intergenic | 40.0% |
| ! | GATTTTGTCACACAGAGTAC+AGG | + | chr8.4:327416-327435 | None:intergenic | 40.0% |
| ! | TTCACTCGTGTTTTCCTGTT+TGG | - | chr8.4:328627-328646 | MS.gene43471:intron | 40.0% |
| ! | TTCCTATTTGGGATAGGCTA+CGG | + | chr8.4:326379-326398 | None:intergenic | 40.0% |
| ! | TTTTGTCACACAGAGTACAG+GGG | + | chr8.4:327414-327433 | None:intergenic | 40.0% |
| !! | ATTATGGCACCGATGAATTC+TGG | - | chr8.4:328797-328816 | MS.gene43471:intron | 40.0% |
| !! | GGGTTTTTCCTATTTGGGAT+AGG | + | chr8.4:326385-326404 | None:intergenic | 40.0% |
| !!! | CTCGCTGTTGCTTTCTATTT+TGG | - | chr8.4:326644-326663 | MS.gene43471:intron | 40.0% |
| !!! | GCCACATTTTTTAAGCATGC+TGG | - | chr8.4:325996-326015 | MS.gene43471:CDS | 40.0% |
| AATCAGACCATCCTCCGATT+GGG | + | chr8.4:327903-327922 | None:intergenic | 45.0% | |
| ACAGTCTTTGAGCTTGCAAC+AGG | - | chr8.4:328467-328486 | MS.gene43471:intron | 45.0% | |
| ATACGGTGAGAAGGCAATGA+AGG | + | chr8.4:326168-326187 | None:intergenic | 45.0% | |
| ATCAACATGGGACGTGACTA+TGG | - | chr8.4:327041-327060 | MS.gene43471:intron | 45.0% | |
| ATCAAGCAATACAAGTGCCC+TGG | - | chr8.4:328892-328911 | MS.gene43471:CDS | 45.0% | |
| ATGTGCGAGAAATGGTTCCA+TGG | - | chr8.4:328832-328851 | MS.gene43471:intron | 45.0% | |
| ATTATCACCACAAGCACCAC+AGG | + | chr8.4:328779-328798 | None:intergenic | 45.0% | |
| CAACTGACTGCTCACAACAA+TGG | - | chr8.4:328512-328531 | MS.gene43471:intron | 45.0% | |
| CACTCGGCTCACTTTCTTTA+TGG | + | chr8.4:327731-327750 | None:intergenic | 45.0% | |
| CATTGTTGTGAGCAGTCAGT+TGG | + | chr8.4:328514-328533 | None:intergenic | 45.0% | |
| CCCCCTTGTTGAGAAAGTTA+TGG | - | chr8.4:326990-327009 | MS.gene43471:intron | 45.0% | |
| CTGCTATGCTCTTACTCCTA+GGG | - | chr8.4:325816-325835 | MS.gene43471:intron | 45.0% | |
| CTGTCAACCTCTTCTTTGAC+CGG | + | chr8.4:328715-328734 | None:intergenic | 45.0% | |
| GACAGACCGGTGAGTTTAAT+TGG | + | chr8.4:326191-326210 | None:intergenic | 45.0% | |
| GAGAAATTGCGGAGAAGATG+GGG | - | chr8.4:327184-327203 | MS.gene43471:intron | 45.0% | |
| GATTCTGATGCTCAAGGTAG+AGG | - | chr8.4:327919-327938 | MS.gene43471:CDS | 45.0% | |
| GATTCTTGCCTCAAGTGCTT+TGG | - | chr8.4:327850-327869 | MS.gene43471:CDS | 45.0% | |
| GGTATAAACTTTGCTCGGGA+TGG | - | chr8.4:326566-326585 | MS.gene43471:intron | 45.0% | |
| GTCAAAGAAGAGGTTGACAG+TGG | - | chr8.4:328715-328734 | MS.gene43471:intron | 45.0% | |
| GTTGCAAGCTCAAAGACTGT+GGG | + | chr8.4:328467-328486 | None:intergenic | 45.0% | |
| TCAACATGGGACGTGACTAT+GGG | - | chr8.4:327042-327061 | MS.gene43471:intron | 45.0% | |
| TCTGCTATGCTCTTACTCCT+AGG | - | chr8.4:325815-325834 | MS.gene43471:intron | 45.0% | |
| TCTTCAACAGTTCGAGGTAC+TGG | + | chr8.4:325579-325598 | None:intergenic | 45.0% | |
| TGCCATATGGGACTACATAG+GGG | - | chr8.4:327695-327714 | MS.gene43471:intron | 45.0% | |
| TGCTTCACAAAATGTTGGGG+TGG | - | chr8.4:327099-327118 | MS.gene43471:intron | 45.0% | |
| TGGTCTGATTCTGATGCTCA+AGG | - | chr8.4:327913-327932 | MS.gene43471:CDS | 45.0% | |
| TGGTTGAGTCTTGCCTTAAG+TGG | - | chr8.4:327804-327823 | MS.gene43471:CDS | 45.0% | |
| TGTGACCTTTGTTGGACATG+CGG | - | chr8.4:327350-327369 | MS.gene43471:intron | 45.0% | |
| TGTTGCAAGCTCAAAGACTG+TGG | + | chr8.4:328468-328487 | None:intergenic | 45.0% | |
| TTCTTGCCTCAAGTGCTTTG+GGG | - | chr8.4:327852-327871 | MS.gene43471:CDS | 45.0% | |
| TTGCAGTTCACAGTGACTCA+TGG | - | chr8.4:326618-326637 | MS.gene43471:intron | 45.0% | |
| TTGCTTGATGTGTTCAGCCT+TGG | + | chr8.4:328881-328900 | None:intergenic | 45.0% | |
| ! | ACAACTTTTCTGCTGCAGTG+CGG | - | chr8.4:325938-325957 | MS.gene43471:CDS | 45.0% |
| ! | AGAACCAAGGTATCCCCAAT+CGG | - | chr8.4:327886-327905 | MS.gene43471:CDS | 45.0% |
| ! | CTTCAACAGTTCGAGGTACT+GGG | + | chr8.4:325578-325597 | None:intergenic | 45.0% |
| ! | GTTTATACCCAATGCTGGCT+CGG | + | chr8.4:326555-326574 | None:intergenic | 45.0% |
| ! | TTTTACCAGCTTTGCGATCC+CGG | - | chr8.4:325740-325759 | MS.gene43471:CDS | 45.0% |
| !! | TTTATACCCAATGCTGGCTC+GGG | + | chr8.4:326554-326573 | None:intergenic | 45.0% |
| !!! | TTCTATTTTGGTGCCCGCTT+TGG | - | chr8.4:326656-326675 | MS.gene43471:intron | 45.0% |
| !! | TTATATTATAAATATTTGAA+TGG | - | chr8.4:326318-326337 | MS.gene43471:intron | 5.0% |
| AAAAGGGATCCAATGGGAGG+GGG | + | chr8.4:328146-328165 | None:intergenic | 50.0% | |
| ACAAAGCTCCTGTCATGGCA+GGG | - | chr8.4:328006-328025 | MS.gene43471:CDS | 50.0% | |
| ACATCTTCACACCCTTGGTC+TGG | + | chr8.4:328687-328706 | None:intergenic | 50.0% | |
| AGACTGGCGGGACTGTTAAA+AGG | + | chr8.4:328659-328678 | None:intergenic | 50.0% | |
| AGAGAGAAACAGGGGAGAAG+AGG | + | chr8.4:327440-327459 | None:intergenic | 50.0% | |
| ATCAGACCATCCTCCGATTG+GGG | + | chr8.4:327902-327921 | None:intergenic | 50.0% | |
| ATGGAATGCAGGAGAAGGAC+TGG | - | chr8.4:326585-326604 | MS.gene43471:intron | 50.0% | |
| CACAAAATGTTGGGGTGGAG+TGG | - | chr8.4:327104-327123 | MS.gene43471:intron | 50.0% | |
| CACCTCTCTGTGACCTTTGT+TGG | - | chr8.4:327342-327361 | MS.gene43471:intron | 50.0% | |
| CAGTCTGAATCCCAGACCAA+GGG | - | chr8.4:328673-328692 | MS.gene43471:intron | 50.0% | |
| CATCTTCACACCCTTGGTCT+GGG | + | chr8.4:328686-328705 | None:intergenic | 50.0% | |
| CTCCGTAGCCTATCCCAAAT+AGG | - | chr8.4:326374-326393 | MS.gene43471:intron | 50.0% | |
| GAAAAGGGATCCAATGGGAG+GGG | + | chr8.4:328147-328166 | None:intergenic | 50.0% | |
| GAATCAGACCATCCTCCGAT+TGG | + | chr8.4:327904-327923 | None:intergenic | 50.0% | |
| GATGAACAAGGTGCAACCTG+TGG | - | chr8.4:328760-328779 | MS.gene43471:intron | 50.0% | |
| GCTTCTTGATACTGCAGCCA+GGG | + | chr8.4:328912-328931 | None:intergenic | 50.0% | |
| GGAAAAGGGATCCAATGGGA+GGG | + | chr8.4:328148-328167 | None:intergenic | 50.0% | |
| GGAAGGGTTGGAGCCATTAT+AGG | - | chr8.4:328034-328053 | MS.gene43471:intron | 50.0% | |
| GGAAGTGAACTTGCCTGTTG+AGG | - | chr8.4:326511-326530 | MS.gene43471:intron | 50.0% | |
| GGTTGACAGTGGAGAAGAAG+AGG | - | chr8.4:328726-328745 | MS.gene43471:intron | 50.0% | |
| GTCCAACAAAGGTCACAGAG+AGG | + | chr8.4:327347-327366 | None:intergenic | 50.0% | |
| GTGCTACAAAGCTCCTGTCA+TGG | - | chr8.4:328001-328020 | MS.gene43471:CDS | 50.0% | |
| TACAAAGCTCCTGTCATGGC+AGG | - | chr8.4:328005-328024 | MS.gene43471:CDS | 50.0% | |
| TGCAGACATCTTCACACCCT+TGG | + | chr8.4:328692-328711 | None:intergenic | 50.0% | |
| TGCCCCTATGTAGTCCCATA+TGG | + | chr8.4:327700-327719 | None:intergenic | 50.0% | |
| TGCGGGGGTAGCTAAAATCA+CGG | - | chr8.4:327151-327170 | MS.gene43471:intron | 50.0% | |
| TTGATGTGTTCAGCCTTGGC+AGG | + | chr8.4:328877-328896 | None:intergenic | 50.0% | |
| ! | AACTTTTCTGCTGCAGTGCG+GGG | - | chr8.4:325940-325959 | MS.gene43471:CDS | 50.0% |
| ! | CAACTTTTCTGCTGCAGTGC+GGG | - | chr8.4:325939-325958 | MS.gene43471:CDS | 50.0% |
| ! | CTATTTGGGATAGGCTACGG+AGG | + | chr8.4:326376-326395 | None:intergenic | 50.0% |
| ! | GACAGGAGCTTTGTAGCACA+AGG | + | chr8.4:328000-328019 | None:intergenic | 50.0% |
| !! | CTCAAGTGCTTTGGGGATGT+GGG | - | chr8.4:327859-327878 | MS.gene43471:CDS | 50.0% |
| !! | GGAGAAGGACTGGTTATCAC+TGG | - | chr8.4:326595-326614 | MS.gene43471:intron | 50.0% |
| !! | TCAAGTGCTTTGGGGATGTG+GGG | - | chr8.4:327860-327879 | MS.gene43471:CDS | 50.0% |
| !! | TTTGGTGCCCGCTTTGGATT+TGG | - | chr8.4:326662-326681 | MS.gene43471:intron | 50.0% |
| AAGGCGGCAGAAAACAGCAC+AGG | + | chr8.4:326023-326042 | None:intergenic | 55.0% | |
| ACTAACCGGGATCGCAAAGC+TGG | + | chr8.4:325748-325767 | None:intergenic | 55.0% | |
| AGGCGGCAGAAAACAGCACA+GGG | + | chr8.4:326022-326041 | None:intergenic | 55.0% | |
| AGGTATCCCCAATCGGAGGA+TGG | - | chr8.4:327893-327912 | MS.gene43471:CDS | 55.0% | |
| CACAGAGTACAGGGGAGAGA+AGG | + | chr8.4:327406-327425 | None:intergenic | 55.0% | |
| CCAGTCTGAATCCCAGACCA+AGG | - | chr8.4:328672-328691 | MS.gene43471:intron | 55.0% | |
| CTTTGCTCGGGATGGAATGC+AGG | - | chr8.4:326574-326593 | MS.gene43471:intron | 55.0% | |
| CTTTGTTGGACATGCGGCTC+CGG | - | chr8.4:327356-327375 | MS.gene43471:intron | 55.0% | |
| GAACTTCCCGAGCCAGCATT+GGG | - | chr8.4:326545-326564 | MS.gene43471:intron | 55.0% | |
| GAGATCGTGGAAGCGAAGAG+CGG | + | chr8.4:327323-327342 | None:intergenic | 55.0% | |
| GATTACAAAGGCAGACGCGC+CGG | - | chr8.4:325609-325628 | MS.gene43471:CDS | 55.0% | |
| GGATGTGGGGAGAAGAACCA+AGG | - | chr8.4:327873-327892 | MS.gene43471:CDS | 55.0% | |
| GGCTTCTTGATACTGCAGCC+AGG | + | chr8.4:328913-328932 | None:intergenic | 55.0% | |
| GGGAAAAGGGATCCAATGGG+AGG | + | chr8.4:328149-328168 | None:intergenic | 55.0% | |
| GGGGGTAGCTAAAATCACGG+AGG | - | chr8.4:327154-327173 | MS.gene43471:intron | 55.0% | |
| GGGTGTGAAGATGTCTGCAC+CGG | - | chr8.4:328693-328712 | MS.gene43471:intron | 55.0% | |
| GTCACAGAGAGGTGAGATCG+TGG | + | chr8.4:327336-327355 | None:intergenic | 55.0% | |
| TAATGGCTCCAACCCTTCCC+TGG | + | chr8.4:328033-328052 | None:intergenic | 55.0% | |
| TCCTCCGATTGGGGATACCT+TGG | + | chr8.4:327893-327912 | None:intergenic | 55.0% | |
| TCGGGATGGAATGCAGGAGA+AGG | - | chr8.4:326580-326599 | MS.gene43471:intron | 55.0% | |
| TGAACTTCCCGAGCCAGCAT+TGG | - | chr8.4:326544-326563 | MS.gene43471:intron | 55.0% | |
| ! | ACCAAGGTATCCCCAATCGG+AGG | - | chr8.4:327889-327908 | MS.gene43471:CDS | 55.0% |
| ! | CCACATCCCCAAAGCACTTG+AGG | + | chr8.4:327861-327880 | None:intergenic | 55.0% |
| ! | CCTTGGTCTGGGATTCAGAC+TGG | + | chr8.4:328675-328694 | None:intergenic | 55.0% |
| ! | GTCTGCACCGGTCAAAGAAG+AGG | - | chr8.4:328705-328724 | MS.gene43471:intron | 55.0% |
| ! | TGGTCTGGGATTCAGACTGG+CGG | + | chr8.4:328672-328691 | None:intergenic | 55.0% |
| !! | AATGCTGGCTCGGGAAGTTC+AGG | + | chr8.4:326545-326564 | None:intergenic | 55.0% |
| !! | CCTCAAGTGCTTTGGGGATG+TGG | - | chr8.4:327858-327877 | MS.gene43471:CDS | 55.0% |
| !! | TCAGGAGGCACTTCCTCAAC+AGG | + | chr8.4:326527-326546 | None:intergenic | 55.0% |
| CGGAGCCGCATGTCCAACAA+AGG | + | chr8.4:327358-327377 | None:intergenic | 60.0% | |
| CTGCAGTGCGGGGTGAATTG+GGG | - | chr8.4:325950-325969 | MS.gene43471:CDS | 60.0% | |
| CTTGAGTCACCCCCTCCCAT+TGG | - | chr8.4:328134-328153 | MS.gene43471:intron | 60.0% | |
| GCTGCAGTGCGGGGTGAATT+GGG | - | chr8.4:325949-325968 | MS.gene43471:CDS | 60.0% | |
| GGTGCAACCTGTGGTGCTTG+TGG | - | chr8.4:328769-328788 | MS.gene43471:intron | 60.0% | |
| GGTGGAGTGGATCTGCGTTG+CGG | - | chr8.4:327117-327136 | MS.gene43471:intron | 60.0% | |
| GTTGCGGCCATAGTGCTGTG+CGG | - | chr8.4:327133-327152 | MS.gene43471:intron | 60.0% | |
| TACAGGGGAGAGAAGGTCGC+CGG | + | chr8.4:327399-327418 | None:intergenic | 60.0% | |
| TCATGGCAGGGTCCAGGGAA+GGG | - | chr8.4:328018-328037 | MS.gene43471:intron | 60.0% | |
| TCCTGTCATGGCAGGGTCCA+GGG | - | chr8.4:328013-328032 | MS.gene43471:CDS | 60.0% | |
| TGCTGCAGTGCGGGGTGAAT+TGG | - | chr8.4:325948-325967 | MS.gene43471:CDS | 60.0% | |
| TTGCGGCCATAGTGCTGTGC+GGG | - | chr8.4:327134-327153 | MS.gene43471:intron | 60.0% | |
| ! | GGTCTGGGATTCAGACTGGC+GGG | + | chr8.4:328671-328690 | None:intergenic | 60.0% |
| CTCCTGTCATGGCAGGGTCC+AGG | - | chr8.4:328012-328031 | MS.gene43471:CDS | 65.0% | |
| GCTACCCCCGCACAGCACTA+TGG | + | chr8.4:327143-327162 | None:intergenic | 65.0% | |
| GTCATGGCAGGGTCCAGGGA+AGG | - | chr8.4:328017-328036 | MS.gene43471:intron | 65.0% | |
| TCCCTGGACCCTGCCATGAC+AGG | + | chr8.4:328017-328036 | None:intergenic | 65.0% | |
| TGCGGCCATAGTGCTGTGCG+GGG | - | chr8.4:327135-327154 | MS.gene43471:intron | 65.0% | |
| !! | GCTGGCTCGGGAAGTTCAGG+AGG | + | chr8.4:326542-326561 | None:intergenic | 65.0% |
| GCGGCCATAGTGCTGTGCGG+GGG | - | chr8.4:327136-327155 | MS.gene43471:intron | 70.0% | |
| GGAGTCAGCACCAGCAGCGC+CGG | + | chr8.4:327378-327397 | None:intergenic | 70.0% | |
| GGCAGGGTCCAGGGAAGGGT+TGG | - | chr8.4:328022-328041 | MS.gene43471:intron | 70.0% | |
| !! | GGCGCTGCTGGTGCTGACTC+CGG | - | chr8.4:327377-327396 | MS.gene43471:intron | 70.0% |
| ACATGCGGCTCCGGCGCTGC+TGG | - | chr8.4:327365-327384 | MS.gene43471:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 325555 | 328945 | 325555 | ID=MS.gene43471 |
| chr8.4 | mRNA | 325555 | 328945 | 325555 | ID=MS.gene43471.t1;Parent=MS.gene43471 |
| chr8.4 | exon | 328846 | 328945 | 328846 | ID=MS.gene43471.t1.exon1;Parent=MS.gene43471.t1 |
| chr8.4 | CDS | 328846 | 328945 | 328846 | ID=cds.MS.gene43471.t1;Parent=MS.gene43471.t1 |
| chr8.4 | exon | 328739 | 328771 | 328739 | ID=MS.gene43471.t1.exon2;Parent=MS.gene43471.t1 |
| chr8.4 | CDS | 328739 | 328771 | 328739 | ID=cds.MS.gene43471.t1;Parent=MS.gene43471.t1 |
| chr8.4 | exon | 327804 | 328032 | 327804 | ID=MS.gene43471.t1.exon3;Parent=MS.gene43471.t1 |
| chr8.4 | CDS | 327804 | 328032 | 327804 | ID=cds.MS.gene43471.t1;Parent=MS.gene43471.t1 |
| chr8.4 | exon | 325935 | 326067 | 325935 | ID=MS.gene43471.t1.exon4;Parent=MS.gene43471.t1 |
| chr8.4 | CDS | 325935 | 326067 | 325935 | ID=cds.MS.gene43471.t1;Parent=MS.gene43471.t1 |
| chr8.4 | exon | 325555 | 325833 | 325555 | ID=MS.gene43471.t1.exon5;Parent=MS.gene43471.t1 |
| chr8.4 | CDS | 325555 | 325833 | 325555 | ID=cds.MS.gene43471.t1;Parent=MS.gene43471.t1 |
| Gene Sequence |
| Protein sequence |
