Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43535.t1 | AES94520.2 | 93.5 | 309 | 12 | 1 | 1 | 301 | 1 | 309 | 6.90E-124 | 453.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43535.t1 | Q8VWK4 | 49.4 | 247 | 117 | 5 | 1 | 242 | 1 | 244 | 7.7e-55 | 215.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43535.t1 | G7K2G9 | 93.5 | 309 | 12 | 1 | 1 | 301 | 1 | 309 | 5.0e-124 | 453.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene43535.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43535.t1 | MTR_5g015340 | 96.117 | 309 | 4 | 1 | 1 | 301 | 1 | 309 | 0.0 | 590 |
| MS.gene43535.t1 | MTR_5g015340 | 98.976 | 293 | 3 | 0 | 1 | 293 | 1 | 293 | 0.0 | 586 |
| MS.gene43535.t1 | MTR_5g015340 | 98.976 | 293 | 3 | 0 | 1 | 293 | 1 | 293 | 0.0 | 586 |
| MS.gene43535.t1 | MTR_4g097130 | 65.806 | 310 | 89 | 6 | 1 | 294 | 1 | 309 | 1.11e-104 | 309 |
| MS.gene43535.t1 | MTR_4g097130 | 65.696 | 309 | 89 | 6 | 1 | 293 | 1 | 308 | 2.87e-103 | 305 |
| MS.gene43535.t1 | MTR_4g097130 | 64.331 | 314 | 90 | 6 | 1 | 293 | 1 | 313 | 5.69e-102 | 302 |
| MS.gene43535.t1 | MTR_2g031870 | 48.133 | 241 | 118 | 5 | 1 | 236 | 1 | 239 | 7.06e-65 | 207 |
| MS.gene43535.t1 | MTR_8g494240 | 48.117 | 239 | 119 | 5 | 1 | 236 | 1 | 237 | 7.47e-63 | 201 |
| MS.gene43535.t1 | MTR_8g494240 | 48.117 | 239 | 119 | 5 | 1 | 236 | 1 | 237 | 8.04e-63 | 202 |
| MS.gene43535.t1 | MTR_8g494240 | 48.117 | 239 | 119 | 5 | 1 | 236 | 1 | 237 | 1.19e-61 | 202 |
| MS.gene43535.t1 | MTR_8g092810 | 40.316 | 253 | 137 | 4 | 1 | 240 | 1 | 252 | 4.85e-49 | 170 |
| MS.gene43535.t1 | MTR_2g031870 | 44.863 | 292 | 128 | 6 | 1 | 287 | 1 | 264 | 7.24e-43 | 149 |
| MS.gene43535.t1 | MTR_0095s0040 | 49.057 | 159 | 67 | 5 | 1 | 149 | 1 | 155 | 4.57e-37 | 133 |
| MS.gene43535.t1 | MTR_1g041765 | 66.292 | 89 | 28 | 1 | 1 | 89 | 1 | 87 | 1.70e-32 | 120 |
| MS.gene43535.t1 | MTR_8g018410 | 32.384 | 281 | 163 | 5 | 1 | 270 | 1 | 265 | 2.01e-31 | 119 |
| MS.gene43535.t1 | MTR_2g099610 | 72.414 | 58 | 16 | 0 | 1 | 58 | 1 | 58 | 2.16e-21 | 92.8 |
| MS.gene43535.t1 | MTR_1g088180 | 38.017 | 121 | 71 | 2 | 121 | 241 | 295 | 411 | 8.74e-14 | 72.0 |
| MS.gene43535.t1 | MTR_3g467090 | 60.377 | 53 | 17 | 2 | 5 | 56 | 569 | 618 | 1.53e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43535.t1 | AT5G67580 | 53.925 | 293 | 131 | 1 | 1 | 289 | 1 | 293 | 7.11e-76 | 235 |
| MS.gene43535.t1 | AT5G67580 | 53.925 | 293 | 131 | 1 | 1 | 289 | 1 | 293 | 7.11e-76 | 235 |
| MS.gene43535.t1 | AT1G49950 | 48.971 | 243 | 116 | 5 | 1 | 238 | 1 | 240 | 3.27e-70 | 221 |
| MS.gene43535.t1 | AT1G49950 | 48.971 | 243 | 116 | 5 | 1 | 238 | 1 | 240 | 3.27e-70 | 221 |
| MS.gene43535.t1 | AT1G49950 | 48.971 | 243 | 116 | 5 | 1 | 238 | 1 | 240 | 3.27e-70 | 221 |
| MS.gene43535.t1 | AT3G49850 | 51.186 | 295 | 132 | 5 | 1 | 289 | 1 | 289 | 2.51e-66 | 210 |
| MS.gene43535.t1 | AT3G49850 | 51.186 | 295 | 132 | 5 | 1 | 289 | 1 | 289 | 2.51e-66 | 210 |
| MS.gene43535.t1 | AT1G72740 | 33.798 | 287 | 167 | 5 | 1 | 284 | 1 | 267 | 1.26e-31 | 120 |
| MS.gene43535.t1 | AT1G72740 | 33.798 | 287 | 173 | 6 | 1 | 284 | 1 | 273 | 4.89e-30 | 115 |
| MS.gene43535.t1 | AT1G17520 | 35.500 | 200 | 112 | 3 | 1 | 187 | 1 | 196 | 1.29e-28 | 112 |
| MS.gene43535.t1 | AT1G17520 | 36.458 | 192 | 105 | 3 | 1 | 179 | 1 | 188 | 4.85e-28 | 110 |
| MS.gene43535.t1 | AT1G17520 | 35.821 | 201 | 111 | 4 | 1 | 187 | 1 | 197 | 5.19e-28 | 110 |
| MS.gene43535.t1 | AT1G17520 | 32.534 | 292 | 162 | 8 | 1 | 275 | 1 | 274 | 2.23e-27 | 108 |
Find 78 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAAGCCTCTTTCAGTTTC+TGG | 0.037607 | 5.3:+8324568 | MS.gene43535:CDS |
| GGCTTAGGAGCTGCAACTTC+TGG | 0.214227 | 5.3:-8324553 | None:intergenic |
| AATGCAGAAGACTTAATATT+TGG | 0.225595 | 5.3:+8327104 | MS.gene43535:CDS |
| CGCAAAATGGTGCTGAAATC+TGG | 0.244024 | 5.3:-8324133 | None:intergenic |
| TAACCTTGATATTTGTTCTT+TGG | 0.249384 | 5.3:-8324605 | None:intergenic |
| GAACCAGTTTGCTTTGATTC+AGG | 0.268324 | 5.3:-8327804 | None:intergenic |
| ACATAAATGTGACTGCAATA+TGG | 0.284211 | 5.3:+8324428 | MS.gene43535:CDS |
| TTCTGGATTATATTGAACTA+TGG | 0.296937 | 5.3:-8324536 | None:intergenic |
| CAGGTGAAGCCATTGAAGTT+TGG | 0.341585 | 5.3:-8327785 | None:intergenic |
| ATTTGAACGCATGCGCAAAA+TGG | 0.355071 | 5.3:-8324146 | None:intergenic |
| CATAAATGTGACTGCAATAT+GGG | 0.356271 | 5.3:+8324429 | MS.gene43535:CDS |
| TGACAATCGAGTCGAATATA+AGG | 0.364822 | 5.3:-8325146 | None:intergenic |
| TCAAATACGGGGCTGGAAAA+TGG | 0.375403 | 5.3:+8324092 | MS.gene43535:CDS |
| TCTGCAGTCCATTTCTGCTT+AGG | 0.379164 | 5.3:-8324040 | None:intergenic |
| AAGCCATTGAAGTTTGGTTC+GGG | 0.398061 | 5.3:-8327779 | None:intergenic |
| GAACTATGGCGGTCGAGGTT+GGG | 0.406154 | 5.3:-8324522 | None:intergenic |
| AGCAGCTGCAAAAGCAGTTG+CGG | 0.409911 | 5.3:+8326970 | MS.gene43535:CDS |
| GACAGTAACTTTATGAGGTT+TGG | 0.411444 | 5.3:-8326311 | None:intergenic |
| CGCCATTGCTGCTTATATAG+AGG | 0.411827 | 5.3:+8325200 | MS.gene43535:CDS |
| ATGCTCTTCCTTGTTACTCC+TGG | 0.423977 | 5.3:+8326829 | MS.gene43535:CDS |
| TGGGTGCTCCTAAGCAGAAA+TGG | 0.425779 | 5.3:+8324032 | MS.gene43535:CDS |
| GAAGAGGCAGCTCTGAAAGC+TGG | 0.428221 | 5.3:+8324064 | MS.gene43535:CDS |
| AGCTGCAAAAGCAGTTGCGG+AGG | 0.430575 | 5.3:+8326973 | MS.gene43535:CDS |
| GAAGCCATTGAAGTTTGGTT+CGG | 0.433007 | 5.3:-8327780 | None:intergenic |
| TTGTTGACAGTAACTTTATG+AGG | 0.436494 | 5.3:-8326316 | None:intergenic |
| CCAGAAACTGAAAGAGGCTT+AGG | 0.456807 | 5.3:-8324568 | None:intergenic |
| TCACCTGAATCAAAGCAAAC+TGG | 0.466576 | 5.3:+8327801 | MS.gene43535:CDS |
| CGACTCGATTGTCAAGTTGA+AGG | 0.467379 | 5.3:+8325155 | MS.gene43535:CDS |
| TGAACTATGGCGGTCGAGGT+TGG | 0.475508 | 5.3:-8324523 | None:intergenic |
| AAAGCTGGAGTAGTCAAATA+CGG | 0.485337 | 5.3:+8324079 | MS.gene43535:CDS |
| GTCAACAAAACTGAAGCATA+TGG | 0.488294 | 5.3:+8326331 | MS.gene43535:CDS |
| TAAGCTATGAACAGGACAAA+TGG | 0.495183 | 5.3:+8324401 | MS.gene43535:intron |
| TGACTGCAATATGGGGATCC+AGG | 0.496295 | 5.3:+8324437 | MS.gene43535:CDS |
| AAGCCTCTTTCAGTTTCTGG+TGG | 0.504900 | 5.3:+8324571 | MS.gene43535:CDS |
| CTTCCTTGTTACTCCTGGAA+GGG | 0.505904 | 5.3:+8326834 | MS.gene43535:CDS |
| GAAATCTGGGTCTGTAAGAA+TGG | 0.507475 | 5.3:-8324119 | None:intergenic |
| GCGGCAATGTCAGAACCCTT+TGG | 0.508392 | 5.3:-8325180 | None:intergenic |
| TCTTCCTTGTTACTCCTGGA+AGG | 0.509910 | 5.3:+8326833 | MS.gene43535:CDS |
| TTATGAGGTTTGGTGGAGAC+CGG | 0.510215 | 5.3:-8326301 | None:intergenic |
| GACAGGTAAATCATAAGTAC+AGG | 0.511866 | 5.3:+8326768 | MS.gene43535:intron |
| AGTAACTTTATGAGGTTTGG+TGG | 0.512273 | 5.3:-8326308 | None:intergenic |
| TGCTGTCTCAGCCTCAGCAA+TGG | 0.514472 | 5.3:-8327005 | None:intergenic |
| GGCTGAGACAGCAGCAAGGG+AGG | 0.514772 | 5.3:+8327015 | MS.gene43535:CDS |
| TGGCGGTCGAGGTTGGGTGG+TGG | 0.532625 | 5.3:-8324516 | None:intergenic |
| GGAGTAGTCAAATACGGGGC+TGG | 0.532847 | 5.3:+8324085 | MS.gene43535:CDS |
| CTTCCAAAGAACAAATATCA+AGG | 0.532967 | 5.3:+8324602 | MS.gene43535:CDS |
| AAACCCGAACCAAACTTCAA+TGG | 0.535228 | 5.3:+8327776 | MS.gene43535:CDS |
| AAGCTGGAGTAGTCAAATAC+GGG | 0.536563 | 5.3:+8324080 | MS.gene43535:CDS |
| GCAAAATGGTGCTGAAATCT+GGG | 0.539501 | 5.3:-8324132 | None:intergenic |
| ATATTGAACTATGGCGGTCG+AGG | 0.543535 | 5.3:-8324527 | None:intergenic |
| GAACAAAACTACAAAACAGT+TGG | 0.546905 | 5.3:+8327751 | MS.gene43535:CDS |
| CCTTGTTACTCCTGGAAGGG+AGG | 0.547136 | 5.3:+8326837 | MS.gene43535:CDS |
| GGCAGAAGCTGCCATTGCTG+AGG | 0.547830 | 5.3:+8326994 | MS.gene43535:CDS |
| TACCTCTATATAAGCAGCAA+TGG | 0.560953 | 5.3:-8325202 | None:intergenic |
| TGAGGCTGAGACAGCAGCAA+GGG | 0.562956 | 5.3:+8327012 | MS.gene43535:CDS |
| CTATGGCGGTCGAGGTTGGG+TGG | 0.567809 | 5.3:-8324519 | None:intergenic |
| TTCTGCTTAGGAGCACCCAT+TGG | 0.569658 | 5.3:-8324028 | None:intergenic |
| TACCTCAATAGGATCAATAC+CGG | 0.570066 | 5.3:+8326282 | MS.gene43535:intron |
| GAAATGGACTGCAGAAGAAG+AGG | 0.574527 | 5.3:+8324048 | MS.gene43535:CDS |
| TGTCAAGTTGAAGGAGCCAA+AGG | 0.577322 | 5.3:+8325164 | MS.gene43535:CDS |
| GTATTGAAACCATAGTCAAT+CGG | 0.577926 | 5.3:-8327833 | None:intergenic |
| GCGTTCAAATGTAGATCTCA+AGG | 0.582023 | 5.3:+8324159 | MS.gene43535:CDS |
| CTCTATATAAGCAGCAATGG+CGG | 0.582614 | 5.3:-8325199 | None:intergenic |
| GTCAAGTTGAAGGAGCCAAA+GGG | 0.586146 | 5.3:+8325165 | MS.gene43535:CDS |
| GAGGGGTGTGACAGCTCAAG+AGG | 0.591616 | 5.3:+8326940 | MS.gene43535:CDS |
| CCTCCCTTCCAGGAGTAACA+AGG | 0.596501 | 5.3:-8326837 | None:intergenic |
| GTTCCACCAGAAACTGAAAG+AGG | 0.604200 | 5.3:-8324574 | None:intergenic |
| CTGAGGCTGAGACAGCAGCA+AGG | 0.616768 | 5.3:+8327011 | MS.gene43535:CDS |
| AACAGCTGAAGCTGAAGCAG+AGG | 0.618779 | 5.3:+8327042 | MS.gene43535:CDS |
| GTTTGCAAAAGCAGCAACGA+AGG | 0.621698 | 5.3:+8327075 | MS.gene43535:CDS |
| CTGAAGCATATGGTGGCAAG+CGG | 0.627992 | 5.3:+8326341 | MS.gene43535:CDS |
| AATATGGGGATCCAGGCAGA+AGG | 0.633799 | 5.3:+8324444 | MS.gene43535:CDS |
| TGGATTATATTGAACTATGG+CGG | 0.635820 | 5.3:-8324533 | None:intergenic |
| GGCAAGCGGCAAATTAGTGA+AGG | 0.638026 | 5.3:+8326355 | MS.gene43535:CDS |
| GCTATGAACAGGACAAATGG+AGG | 0.639785 | 5.3:+8324404 | MS.gene43535:intron |
| ATAAATGTGACTGCAATATG+GGG | 0.648699 | 5.3:+8324430 | MS.gene43535:CDS |
| AACAAAACTGAAGCATATGG+TGG | 0.677408 | 5.3:+8326334 | MS.gene43535:CDS |
| AGCTGGAGTAGTCAAATACG+GGG | 0.718064 | 5.3:+8324081 | MS.gene43535:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAGCATTATAAAAAATT+AGG | - | chr5.3:8327383-8327402 | None:intergenic | 10.0% |
| !! | AGTTAACTTTATAAAAAATT+AGG | - | chr5.3:8327234-8327253 | None:intergenic | 10.0% |
| !! | ATTAGCATTATAAAAAATTA+GGG | - | chr5.3:8327382-8327401 | None:intergenic | 10.0% |
| !! | GTTAACTTTATAAAAAATTA+GGG | - | chr5.3:8327233-8327252 | None:intergenic | 10.0% |
| !! | AAGTAATTTAATATGATACT+TGG | + | chr5.3:8326715-8326734 | MS.gene43535:intron | 15.0% |
| !! | AGTAAAATTATTGTTATGTT+AGG | + | chr5.3:8324228-8324247 | MS.gene43535:intron | 15.0% |
| !! | AGTAATATAGGTTTATTAAA+AGG | - | chr5.3:8326677-8326696 | None:intergenic | 15.0% |
| !! | ATAAACAACATATAAATCAA+TGG | - | chr5.3:8325953-8325972 | None:intergenic | 15.0% |
| !! | TATTACTGTAAGATAAATAT+TGG | + | chr5.3:8326690-8326709 | MS.gene43535:intron | 15.0% |
| !! | TATTTATCTTACAGTAATAT+AGG | - | chr5.3:8326689-8326708 | None:intergenic | 15.0% |
| !!! | CATTAATTCATTTAAAACTT+TGG | - | chr5.3:8324803-8324822 | None:intergenic | 15.0% |
| !!! | TAAAAGTATTTTAAACTCTT+TGG | + | chr5.3:8325463-8325482 | MS.gene43535:intron | 15.0% |
| !! | ATATCCAATAAATTATTCAG+TGG | - | chr5.3:8326479-8326498 | None:intergenic | 20.0% |
| !! | ATTGGTAAAGAGAAATTAAT+TGG | + | chr5.3:8326545-8326564 | MS.gene43535:intron | 20.0% |
| !! | GAAAAACTTAGATATTAATG+AGG | + | chr5.3:8325815-8325834 | MS.gene43535:intron | 20.0% |
| !! | GATTATATATACCATTAATG+AGG | - | chr5.3:8325243-8325262 | None:intergenic | 20.0% |
| !! | TCATATTAAACTATATACGT+AGG | + | chr5.3:8324351-8324370 | MS.gene43535:intron | 20.0% |
| !! | TGAATACAAAAAATCTGTTA+TGG | + | chr5.3:8326583-8326602 | MS.gene43535:intron | 20.0% |
| !! | TTACACTTTATAGAACTAAA+TGG | + | chr5.3:8324651-8324670 | MS.gene43535:intron | 20.0% |
| !! | TTATTGGATATTGAATGTTA+TGG | + | chr5.3:8326488-8326507 | MS.gene43535:intron | 20.0% |
| !!! | AAAAAACTGCTCTAATATTT+TGG | - | chr5.3:8326037-8326056 | None:intergenic | 20.0% |
| !!! | AAACATTTTGTAGTTGTAAT+TGG | - | chr5.3:8324988-8325007 | None:intergenic | 20.0% |
| !!! | TCTTTTTAATAATGACAGAT+TGG | + | chr5.3:8325119-8325138 | MS.gene43535:intron | 20.0% |
| !!! | TTTTAACACAATTACAAACA+TGG | - | chr5.3:8327483-8327502 | None:intergenic | 20.0% |
| ! | AATGCAGAAGACTTAATATT+TGG | + | chr5.3:8327104-8327123 | MS.gene43535:CDS | 25.0% |
| ! | AGTTATTAGCAGAAAATGAT+TGG | + | chr5.3:8326527-8326546 | MS.gene43535:intron | 25.0% |
| ! | ATGCATTAAGTAATGTTTCT+TGG | - | chr5.3:8327142-8327161 | None:intergenic | 25.0% |
| ! | GTTCTATCATAAACCTTATT+TGG | - | chr5.3:8325843-8325862 | None:intergenic | 25.0% |
| ! | TAACCTTGATATTTGTTCTT+TGG | - | chr5.3:8324608-8324627 | None:intergenic | 25.0% |
| ! | TAACTGTTTACTTTATCACA+AGG | + | chr5.3:8324287-8324306 | MS.gene43535:intron | 25.0% |
| ! | TATAATAGTTATCAGCTCTA+AGG | + | chr5.3:8324752-8324771 | MS.gene43535:intron | 25.0% |
| ! | TATGAAGGAATTGGAATAAA+TGG | - | chr5.3:8325366-8325385 | None:intergenic | 25.0% |
| ! | TATTAATGAGGATCCAAATA+AGG | + | chr5.3:8325827-8325846 | MS.gene43535:intron | 25.0% |
| ! | TTAAGTAATGTTTCTTGGTA+AGG | - | chr5.3:8327137-8327156 | None:intergenic | 25.0% |
| ! | TTCTGGATTATATTGAACTA+TGG | - | chr5.3:8324539-8324558 | None:intergenic | 25.0% |
| !! | AAACAAGTTGCAAACAATTT+TGG | + | chr5.3:8324827-8324846 | MS.gene43535:intron | 25.0% |
| !! | GTTTCTCATATAGTTTTTCT+AGG | - | chr5.3:8325789-8325808 | None:intergenic | 25.0% |
| !!! | ATGTTGAGCTTTTAAAAATG+AGG | + | chr5.3:8326921-8326940 | MS.gene43535:CDS | 25.0% |
| !!! | CATCAATTTGAGATTTTGAA+AGG | - | chr5.3:8326904-8326923 | None:intergenic | 25.0% |
| !!! | TGGTGGTTATTTTCATTTTT+CGG | - | chr5.3:8324502-8324521 | None:intergenic | 25.0% |
| !!! | TGTTGAGCTTTTAAAAATGA+GGG | + | chr5.3:8326922-8326941 | MS.gene43535:CDS | 25.0% |
| !!! | TTTGTTTTAAATGTTCTAGC+AGG | + | chr5.3:8324187-8324206 | MS.gene43535:intron | 25.0% |
| AAAACAAGCATAGCAAAGAT+GGG | + | chr5.3:8325557-8325576 | MS.gene43535:intron | 30.0% | |
| AAATATCTTTCGTATTCCCA+CGG | + | chr5.3:8327537-8327556 | MS.gene43535:intron | 30.0% | |
| AAATTCACCACAATCTTAAG+GGG | - | chr5.3:8325052-8325071 | None:intergenic | 30.0% | |
| AACAAAAATCCCCTAAGATT+TGG | + | chr5.3:8327646-8327665 | MS.gene43535:intron | 30.0% | |
| AATACATTCCCAGGAATATA+TGG | + | chr5.3:8327441-8327460 | MS.gene43535:intron | 30.0% | |
| ACATAAATGTGACTGCAATA+TGG | + | chr5.3:8324428-8324447 | MS.gene43535:CDS | 30.0% | |
| ACATATAAATCAATGGACCT+AGG | - | chr5.3:8325946-8325965 | None:intergenic | 30.0% | |
| AGAAACATTGCCAAATCTTA+GGG | - | chr5.3:8327659-8327678 | None:intergenic | 30.0% | |
| ATAAATGTGACTGCAATATG+GGG | + | chr5.3:8324430-8324449 | MS.gene43535:CDS | 30.0% | |
| CAAATTCACCACAATCTTAA+GGG | - | chr5.3:8325053-8325072 | None:intergenic | 30.0% | |
| CATAAATGTGACTGCAATAT+GGG | + | chr5.3:8324429-8324448 | MS.gene43535:CDS | 30.0% | |
| CTGAAATTGTTTACCTCAAT+AGG | + | chr5.3:8326271-8326290 | MS.gene43535:intron | 30.0% | |
| CTGTCCACTGAATAATTTAT+TGG | + | chr5.3:8326472-8326491 | MS.gene43535:intron | 30.0% | |
| CTTATGATTTACCTGTCATT+AGG | - | chr5.3:8326765-8326784 | None:intergenic | 30.0% | |
| CTTCCAAAGAACAAATATCA+AGG | + | chr5.3:8324602-8324621 | MS.gene43535:CDS | 30.0% | |
| GAAATAATACTGCAATGCAA+AGG | + | chr5.3:8327585-8327604 | MS.gene43535:intron | 30.0% | |
| GAACAAAACTACAAAACAGT+TGG | + | chr5.3:8327751-8327770 | MS.gene43535:CDS | 30.0% | |
| GTTAGAACTAGTTGAAATTG+TGG | - | chr5.3:8325983-8326002 | None:intergenic | 30.0% | |
| TAAAACAAGCATAGCAAAGA+TGG | + | chr5.3:8325556-8325575 | MS.gene43535:intron | 30.0% | |
| TAAATGTTCTAGCAGGTTAT+AGG | + | chr5.3:8324194-8324213 | MS.gene43535:intron | 30.0% | |
| TAGAAACATTGCCAAATCTT+AGG | - | chr5.3:8327660-8327679 | None:intergenic | 30.0% | |
| TATAGGTCAAACTGTTATGA+AGG | - | chr5.3:8325381-8325400 | None:intergenic | 30.0% | |
| TATATTCCTGGGAATGTATT+TGG | - | chr5.3:8327441-8327460 | None:intergenic | 30.0% | |
| TCAAACTGTTATGAAGGAAT+TGG | - | chr5.3:8325375-8325394 | None:intergenic | 30.0% | |
| TCAGAAAACAATATACCTTG+TGG | - | chr5.3:8324867-8324886 | None:intergenic | 30.0% | |
| TGGATTATATTGAACTATGG+CGG | - | chr5.3:8324536-8324555 | None:intergenic | 30.0% | |
| TTGTTGACAGTAACTTTATG+AGG | - | chr5.3:8326319-8326338 | None:intergenic | 30.0% | |
| ! | CATTTAAAACTTTGGTATGC+TGG | - | chr5.3:8324795-8324814 | None:intergenic | 30.0% |
| ! | TGATGATTCTTTTCTAAGCA+TGG | + | chr5.3:8324911-8324930 | MS.gene43535:intron | 30.0% |
| !! | ACTAGTTCTAACATGTAACT+CGG | + | chr5.3:8325991-8326010 | MS.gene43535:intron | 30.0% |
| !! | GGTGGTTATTTTCATTTTTC+GGG | - | chr5.3:8324501-8324520 | None:intergenic | 30.0% |
| !! | GTGGTTATTTTCATTTTTCG+GGG | - | chr5.3:8324500-8324519 | None:intergenic | 30.0% |
| !! | GTTGAGCTTTTAAAAATGAG+GGG | + | chr5.3:8326923-8326942 | MS.gene43535:CDS | 30.0% |
| !! | TAGGAGAAAGCATTCAAAAT+GGG | - | chr5.3:8327199-8327218 | None:intergenic | 30.0% |
| !! | TGGTTATTTTCATTTTTCGG+GGG | - | chr5.3:8324499-8324518 | None:intergenic | 30.0% |
| !! | TTGAGATTTTGAAAGGATGT+TGG | - | chr5.3:8326897-8326916 | None:intergenic | 30.0% |
| !!! | AGAGCAGTTTTTTCATTTGA+TGG | + | chr5.3:8326044-8326063 | MS.gene43535:intron | 30.0% |
| !!! | ATATTTTGGTACCAGAAGAA+TGG | - | chr5.3:8326023-8326042 | None:intergenic | 30.0% |
| !!! | TGGCAATGTTTTTTCAATGA+TGG | + | chr5.3:8325087-8325106 | MS.gene43535:intron | 30.0% |
| AAACAAGCATAGCAAAGATG+GGG | + | chr5.3:8325558-8325577 | MS.gene43535:intron | 35.0% | |
| AAACTTGGTTTCTTGGAACT+TGG | + | chr5.3:8326399-8326418 | MS.gene43535:intron | 35.0% | |
| AAAGCTGGAGTAGTCAAATA+CGG | + | chr5.3:8324079-8324098 | MS.gene43535:CDS | 35.0% | |
| AACAAAACTGAAGCATATGG+TGG | + | chr5.3:8326334-8326353 | MS.gene43535:CDS | 35.0% | |
| AACATTAGAGAGAGAGAGTT+GGG | + | chr5.3:8325632-8325651 | MS.gene43535:intron | 35.0% | |
| AAGAACCAACACGAGAATAA+CGG | + | chr5.3:8325502-8325521 | MS.gene43535:intron | 35.0% | |
| AATTAGGGAAAGTAACCACT+AGG | - | chr5.3:8327218-8327237 | None:intergenic | 35.0% | |
| AATTTGCAACGTCAATCATG+TGG | + | chr5.3:8325067-8325086 | MS.gene43535:intron | 35.0% | |
| ACAATATCCCCTTAAGATTG+TGG | + | chr5.3:8325042-8325061 | MS.gene43535:intron | 35.0% | |
| ACCTACAGTAGAAATGATAG+TGG | + | chr5.3:8325660-8325679 | MS.gene43535:intron | 35.0% | |
| ACTAAATGGTCTGTGATTCT+TGG | + | chr5.3:8324665-8324684 | MS.gene43535:intron | 35.0% | |
| ACTGAGTGAGGAAAAAAACT+TGG | - | chr5.3:8325289-8325308 | None:intergenic | 35.0% | |
| AGTAACTTTATGAGGTTTGG+TGG | - | chr5.3:8326311-8326330 | None:intergenic | 35.0% | |
| AGTTAACCAAATACATTCCC+AGG | + | chr5.3:8327432-8327451 | MS.gene43535:intron | 35.0% | |
| ATGCATTGAGAAACGTTTCT+AGG | - | chr5.3:8327291-8327310 | None:intergenic | 35.0% | |
| ATTCCCAGGAATATATGGTA+AGG | + | chr5.3:8327446-8327465 | MS.gene43535:intron | 35.0% | |
| CCATAGAGAATAAAAACCGT+GGG | - | chr5.3:8327556-8327575 | None:intergenic | 35.0% | |
| CTCTCCTTATACAGAATCTA+CGG | - | chr5.3:8325722-8325741 | None:intergenic | 35.0% | |
| GAAACATTGCCAAATCTTAG+GGG | - | chr5.3:8327658-8327677 | None:intergenic | 35.0% | |
| GACAGGTAAATCATAAGTAC+AGG | + | chr5.3:8326768-8326787 | MS.gene43535:intron | 35.0% | |
| GACAGTAACTTTATGAGGTT+TGG | - | chr5.3:8326314-8326333 | None:intergenic | 35.0% | |
| GCAAATTCACCACAATCTTA+AGG | - | chr5.3:8325054-8325073 | None:intergenic | 35.0% | |
| GGGAGACTGAATAAAACTAT+AGG | - | chr5.3:8325398-8325417 | None:intergenic | 35.0% | |
| GTCAACAAAACTGAAGCATA+TGG | + | chr5.3:8326331-8326350 | MS.gene43535:CDS | 35.0% | |
| GTTACTGAAACTTGGTTTCT+TGG | + | chr5.3:8326392-8326411 | MS.gene43535:intron | 35.0% | |
| TAAGCTATGAACAGGACAAA+TGG | + | chr5.3:8324401-8324420 | MS.gene43535:intron | 35.0% | |
| TACCATTAATGAGGCAATCA+AGG | - | chr5.3:8325234-8325253 | None:intergenic | 35.0% | |
| TACCTCAATAGGATCAATAC+CGG | + | chr5.3:8326282-8326301 | MS.gene43535:intron | 35.0% | |
| TACCTCTATATAAGCAGCAA+TGG | - | chr5.3:8325205-8325224 | None:intergenic | 35.0% | |
| TACCTTGATTGCCTCATTAA+TGG | + | chr5.3:8325229-8325248 | MS.gene43535:intron | 35.0% | |
| TACTCTTCGTTACTGAAACT+TGG | + | chr5.3:8326384-8326403 | MS.gene43535:intron | 35.0% | |
| TAGTGGGAGTGAAATTCTAT+TGG | + | chr5.3:8326638-8326657 | MS.gene43535:intron | 35.0% | |
| TATAAGGAGAGTAGATCAGA+TGG | + | chr5.3:8325731-8325750 | MS.gene43535:intron | 35.0% | |
| TCCACTATCATTTCTACTGT+AGG | - | chr5.3:8325664-8325683 | None:intergenic | 35.0% | |
| TCCATAGAGAATAAAAACCG+TGG | - | chr5.3:8327557-8327576 | None:intergenic | 35.0% | |
| TCTCCTTATACAGAATCTAC+GGG | - | chr5.3:8325721-8325740 | None:intergenic | 35.0% | |
| TGACAATCGAGTCGAATATA+AGG | - | chr5.3:8325149-8325168 | None:intergenic | 35.0% | |
| TGTTATGGTTACACTGTTAC+TGG | + | chr5.3:8326503-8326522 | MS.gene43535:intron | 35.0% | |
| TTCCCAGGAATATATGGTAA+GGG | + | chr5.3:8327447-8327466 | MS.gene43535:intron | 35.0% | |
| TTCCCTTACCATATATTCCT+GGG | - | chr5.3:8327452-8327471 | None:intergenic | 35.0% | |
| ! | AATGGTCTGTCATTTGAGAT+AGG | - | chr5.3:8325348-8325367 | None:intergenic | 35.0% |
| ! | ACGGTTTTTATTCTCTATGG+AGG | + | chr5.3:8327556-8327575 | MS.gene43535:intron | 35.0% |
| ! | AGTCTCCCTCTAGAAAATAT+CGG | + | chr5.3:8325410-8325429 | MS.gene43535:intron | 35.0% |
| ! | ATGTGCTTTAAGCTATGAAC+AGG | + | chr5.3:8324393-8324412 | MS.gene43535:intron | 35.0% |
| ! | CGGTTTTTATTCTCTATGGA+GGG | + | chr5.3:8327557-8327576 | MS.gene43535:intron | 35.0% |
| ! | GCTATAATTTGTGTACCACA+AGG | + | chr5.3:8324849-8324868 | MS.gene43535:intron | 35.0% |
| ! | GGTTTTTATTCTCTATGGAG+GGG | + | chr5.3:8327558-8327577 | MS.gene43535:intron | 35.0% |
| ! | GTTTTTATTCTCTATGGAGG+GGG | + | chr5.3:8327559-8327578 | MS.gene43535:intron | 35.0% |
| ! | TCATTTGAGATAGGATAGTG+TGG | - | chr5.3:8325339-8325358 | None:intergenic | 35.0% |
| ! | TCTTTTCCTGCAAACTTTTC+TGG | + | chr5.3:8326438-8326457 | MS.gene43535:intron | 35.0% |
| ! | TTTTGAATGCTTTCTCCTAG+TGG | + | chr5.3:8327200-8327219 | MS.gene43535:intron | 35.0% |
| !! | AGCATTCAAAATGGGCTAAA+AGG | - | chr5.3:8327191-8327210 | None:intergenic | 35.0% |
| !! | CAGGAAAAGATACTGCTTTT+TGG | - | chr5.3:8326428-8326447 | None:intergenic | 35.0% |
| !! | CTAGGAGAAAGCATTCAAAA+TGG | - | chr5.3:8327200-8327219 | None:intergenic | 35.0% |
| !! | CTAGTTCTAACATGTAACTC+GGG | + | chr5.3:8325992-8326011 | MS.gene43535:intron | 35.0% |
| !! | CTGTTCATGGATTGGTTTAT+AGG | + | chr5.3:8327722-8327741 | MS.gene43535:intron | 35.0% |
| !! | GTAGAAATGATAGTGGAAAC+AGG | + | chr5.3:8325667-8325686 | MS.gene43535:intron | 35.0% |
| !! | TAGGAGAAAGCATTCAAGAT+GGG | - | chr5.3:8327348-8327367 | None:intergenic | 35.0% |
| !! | TAGTTCTAACATGTAACTCG+GGG | + | chr5.3:8325993-8326012 | MS.gene43535:intron | 35.0% |
| !! | TCTGCTTTTGGAGAATCTTT+TGG | - | chr5.3:8326863-8326882 | None:intergenic | 35.0% |
| !!! | TTATTTTCATTTTTCGGGGG+TGG | - | chr5.3:8324496-8324515 | None:intergenic | 35.0% |
| AAACCCGAACCAAACTTCAA+TGG | + | chr5.3:8327776-8327795 | MS.gene43535:CDS | 40.0% | |
| AAGCTGGAGTAGTCAAATAC+GGG | + | chr5.3:8324080-8324099 | MS.gene43535:CDS | 40.0% | |
| AATGGTCTGTGATTCTTGGT+TGG | + | chr5.3:8324669-8324688 | MS.gene43535:intron | 40.0% | |
| ACACGCACAAACTCACATAT+AGG | + | chr5.3:8324960-8324979 | MS.gene43535:intron | 40.0% | |
| ACATTAGAGAGAGAGAGTTG+GGG | + | chr5.3:8325633-8325652 | MS.gene43535:intron | 40.0% | |
| ACATTCCGTTATTCTCGTGT+TGG | - | chr5.3:8325510-8325529 | None:intergenic | 40.0% | |
| AGCCTTTCTTAAACACAGGA+AGG | - | chr5.3:8326137-8326156 | None:intergenic | 40.0% | |
| AGTCTGACATACCTAATGAC+AGG | + | chr5.3:8326751-8326770 | MS.gene43535:intron | 40.0% | |
| ATATGGGCATTCTCTGTAGT+GGG | + | chr5.3:8326622-8326641 | MS.gene43535:intron | 40.0% | |
| ATTTGAACGCATGCGCAAAA+TGG | - | chr5.3:8324149-8324168 | None:intergenic | 40.0% | |
| CAACATTAGAGAGAGAGAGT+TGG | + | chr5.3:8325631-8325650 | MS.gene43535:intron | 40.0% | |
| CTCTATATAAGCAGCAATGG+CGG | - | chr5.3:8325202-8325221 | None:intergenic | 40.0% | |
| GAAATCTGGGTCTGTAAGAA+TGG | - | chr5.3:8324122-8324141 | None:intergenic | 40.0% | |
| GAAGCCATTGAAGTTTGGTT+CGG | - | chr5.3:8327783-8327802 | None:intergenic | 40.0% | |
| GCGTTCAAATGTAGATCTCA+AGG | + | chr5.3:8324159-8324178 | MS.gene43535:CDS | 40.0% | |
| GCTAAGCCTTTCTTAAACAC+AGG | - | chr5.3:8326141-8326160 | None:intergenic | 40.0% | |
| GTCATTAGGTATGTCAGACT+AGG | - | chr5.3:8326751-8326770 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACAAGAT+AGG | + | chr5.3:8325597-8325616 | MS.gene43535:intron | 40.0% | |
| GTTCCCTTACCATATATTCC+TGG | - | chr5.3:8327453-8327472 | None:intergenic | 40.0% | |
| GTTGGAAATGTTTCTCTCCT+AGG | + | chr5.3:8325926-8325945 | MS.gene43535:intron | 40.0% | |
| TAGGGCGCATTATGAAAAGA+TGG | - | chr5.3:8327691-8327710 | None:intergenic | 40.0% | |
| TAGTCGAACTACGCACATAT+GGG | + | chr5.3:8326606-8326625 | MS.gene43535:intron | 40.0% | |
| TCACCTGAATCAAAGCAAAC+TGG | + | chr5.3:8327801-8327820 | MS.gene43535:CDS | 40.0% | |
| TCTTGAATGCTTTCTCCTAG+TGG | + | chr5.3:8327349-8327368 | MS.gene43535:intron | 40.0% | |
| TGCCTTCCTGTGTTTAAGAA+AGG | + | chr5.3:8326132-8326151 | MS.gene43535:intron | 40.0% | |
| TTGTAAACTTGATCGCAAGC+AGG | - | chr5.3:8325440-8325459 | None:intergenic | 40.0% | |
| TTTCATAATGCGCCCTATCT+AGG | + | chr5.3:8327694-8327713 | MS.gene43535:intron | 40.0% | |
| ! | AAGCCATTGAAGTTTGGTTC+GGG | - | chr5.3:8327782-8327801 | None:intergenic | 40.0% |
| ! | CCCACGGTTTTTATTCTCTA+TGG | + | chr5.3:8327553-8327572 | MS.gene43535:intron | 40.0% |
| ! | GAACCAGTTTGCTTTGATTC+AGG | - | chr5.3:8327807-8327826 | None:intergenic | 40.0% |
| ! | GAGAATAACGGAATGTTGAG+CGG | + | chr5.3:8325514-8325533 | MS.gene43535:intron | 40.0% |
| ! | GCAAAATGGTGCTGAAATCT+GGG | - | chr5.3:8324135-8324154 | None:intergenic | 40.0% |
| ! | GCATCAGTTTTCTCTGCTTT+TGG | - | chr5.3:8326875-8326894 | None:intergenic | 40.0% |
| ! | GCTGACCGATATTTTCTAGA+GGG | - | chr5.3:8325418-8325437 | None:intergenic | 40.0% |
| ! | TAAGGCTTGATGGTTGTTGT+TGG | + | chr5.3:8325908-8325927 | MS.gene43535:intron | 40.0% |
| !! | AGCATTCAAGATGGGCTAAA+AGG | - | chr5.3:8327340-8327359 | None:intergenic | 40.0% |
| !! | CTAGGAGAAAGCATTCAAGA+TGG | - | chr5.3:8327349-8327368 | None:intergenic | 40.0% |
| !! | TCGTGTTGGTTCTTATACAG+AGG | - | chr5.3:8325496-8325515 | None:intergenic | 40.0% |
| !!! | GGAAGAGCATCTTCTTTTCT+CGG | - | chr5.3:8326819-8326838 | None:intergenic | 40.0% |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr5.3:8325734-8325753 | MS.gene43535:intron | 45.0% | |
| AGCTGGAGTAGTCAAATACG+GGG | + | chr5.3:8324081-8324100 | MS.gene43535:CDS | 45.0% | |
| ATAATGCGCCCTATCTAGGT+AGG | + | chr5.3:8327698-8327717 | MS.gene43535:intron | 45.0% | |
| ATATTGAACTATGGCGGTCG+AGG | - | chr5.3:8324530-8324549 | None:intergenic | 45.0% | |
| ATGAACAGCCCTACCTAGAT+AGG | - | chr5.3:8327710-8327729 | None:intergenic | 45.0% | |
| ATGCTCTTCCTTGTTACTCC+TGG | + | chr5.3:8326829-8326848 | MS.gene43535:CDS | 45.0% | |
| CAGGTGAAGCCATTGAAGTT+TGG | - | chr5.3:8327788-8327807 | None:intergenic | 45.0% | |
| CATATGGGCATTCTCTGTAG+TGG | + | chr5.3:8326621-8326640 | MS.gene43535:intron | 45.0% | |
| CCAGAAACTGAAAGAGGCTT+AGG | - | chr5.3:8324571-8324590 | None:intergenic | 45.0% | |
| CCTAAGCCTCTTTCAGTTTC+TGG | + | chr5.3:8324568-8324587 | MS.gene43535:CDS | 45.0% | |
| CTTAGTGGGATAAGGCTTGA+TGG | + | chr5.3:8325898-8325917 | MS.gene43535:intron | 45.0% | |
| CTTCCTTGTTACTCCTGGAA+GGG | + | chr5.3:8326834-8326853 | MS.gene43535:CDS | 45.0% | |
| GAGGATAGTCAGATCACTAG+AGG | + | chr5.3:8325753-8325772 | MS.gene43535:intron | 45.0% | |
| GCTATGAACAGGACAAATGG+AGG | + | chr5.3:8324404-8324423 | MS.gene43535:intron | 45.0% | |
| GGACCCGTAGATTCTGTATA+AGG | + | chr5.3:8325715-8325734 | MS.gene43535:intron | 45.0% | |
| GTAACTGATCTCACTGAGTG+AGG | - | chr5.3:8325301-8325320 | None:intergenic | 45.0% | |
| GTAGTCGAACTACGCACATA+TGG | + | chr5.3:8326605-8326624 | MS.gene43535:intron | 45.0% | |
| GTTCCACCAGAAACTGAAAG+AGG | - | chr5.3:8324577-8324596 | None:intergenic | 45.0% | |
| GTTTGCAAAAGCAGCAACGA+AGG | + | chr5.3:8327075-8327094 | MS.gene43535:CDS | 45.0% | |
| TAATGCGCCCTATCTAGGTA+GGG | + | chr5.3:8327699-8327718 | MS.gene43535:intron | 45.0% | |
| TATCTAGGTAGGGCTGTTCA+TGG | + | chr5.3:8327709-8327728 | MS.gene43535:intron | 45.0% | |
| TCAAATACGGGGCTGGAAAA+TGG | + | chr5.3:8324092-8324111 | MS.gene43535:CDS | 45.0% | |
| TCTGCAGTCCATTTCTGCTT+AGG | - | chr5.3:8324043-8324062 | None:intergenic | 45.0% | |
| TCTTCCTTGTTACTCCTGGA+AGG | + | chr5.3:8326833-8326852 | MS.gene43535:CDS | 45.0% | |
| TGAACAGCCCTACCTAGATA+GGG | - | chr5.3:8327709-8327728 | None:intergenic | 45.0% | |
| TTATTCTCTATGGAGGGGGT+GGG | + | chr5.3:8327563-8327582 | MS.gene43535:intron | 45.0% | |
| TTTATTCTCTATGGAGGGGG+TGG | + | chr5.3:8327562-8327581 | MS.gene43535:intron | 45.0% | |
| ! | AAGCCTCTTTCAGTTTCTGG+TGG | + | chr5.3:8324571-8324590 | MS.gene43535:CDS | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.3:8325896-8325915 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.3:8325897-8325916 | None:intergenic | 45.0% |
| ! | CGCAAAATGGTGCTGAAATC+TGG | - | chr5.3:8324136-8324155 | None:intergenic | 45.0% |
| ! | CGCCATTGCTGCTTATATAG+AGG | + | chr5.3:8325200-8325219 | MS.gene43535:CDS | 45.0% |
| ! | GAGCTTAGGGGAACTTGTTT+AGG | - | chr5.3:8326082-8326101 | None:intergenic | 45.0% |
| ! | GGCTGACCGATATTTTCTAG+AGG | - | chr5.3:8325419-8325438 | None:intergenic | 45.0% |
| ! | GGTTTGAGATGCTACTGCTA+CGG | + | chr5.3:8324249-8324268 | MS.gene43535:intron | 45.0% |
| ! | GTTAAGAGCTTGTTCTTGCC+AGG | - | chr5.3:8326108-8326127 | None:intergenic | 45.0% |
| ! | TCAAGCCTTATCCCACTAAG+TGG | - | chr5.3:8325898-8325917 | None:intergenic | 45.0% |
| !! | CGACTCGATTGTCAAGTTGA+AGG | + | chr5.3:8325155-8325174 | MS.gene43535:CDS | 45.0% |
| !! | CTGCAAACTTTTCTGGCGAA+GGG | + | chr5.3:8326445-8326464 | MS.gene43535:intron | 45.0% |
| !! | GAAATGGACTGCAGAAGAAG+AGG | + | chr5.3:8324048-8324067 | MS.gene43535:CDS | 45.0% |
| !! | GACCGGTATTGATCCTATTG+AGG | - | chr5.3:8326287-8326306 | None:intergenic | 45.0% |
| !! | GTCAAGTTGAAGGAGCCAAA+GGG | + | chr5.3:8325165-8325184 | MS.gene43535:CDS | 45.0% |
| !! | TGTCAAGTTGAAGGAGCCAA+AGG | + | chr5.3:8325164-8325183 | MS.gene43535:CDS | 45.0% |
| !! | TTATGAGGTTTGGTGGAGAC+CGG | - | chr5.3:8326304-8326323 | None:intergenic | 45.0% |
| !!! | TTTCATTTTTCGGGGGTGGT+AGG | - | chr5.3:8324492-8324511 | None:intergenic | 45.0% |
| AACAGCTGAAGCTGAAGCAG+AGG | + | chr5.3:8327042-8327061 | MS.gene43535:CDS | 50.0% | |
| AATATGGGGATCCAGGCAGA+AGG | + | chr5.3:8324444-8324463 | MS.gene43535:CDS | 50.0% | |
| ACTAAGTGGGGTCTGCTACA+TGG | - | chr5.3:8325884-8325903 | None:intergenic | 50.0% | |
| AGACCCCACTTAGTGGGATA+AGG | + | chr5.3:8325890-8325909 | MS.gene43535:intron | 50.0% | |
| AGCAGCTGCAAAAGCAGTTG+CGG | + | chr5.3:8326970-8326989 | MS.gene43535:CDS | 50.0% | |
| AGGTAGGGCTGTTCATGGAT+TGG | + | chr5.3:8327714-8327733 | MS.gene43535:intron | 50.0% | |
| AGTCAGATCACTAGAGGCAG+AGG | + | chr5.3:8325759-8325778 | MS.gene43535:intron | 50.0% | |
| ATGTAGCAGACCCCACTTAG+TGG | + | chr5.3:8325883-8325902 | MS.gene43535:intron | 50.0% | |
| CAAAGATGGGGATGTTGCGT+TGG | + | chr5.3:8325570-8325589 | MS.gene43535:intron | 50.0% | |
| CCTTCGCCAGAAAAGTTTGC+AGG | - | chr5.3:8326447-8326466 | None:intergenic | 50.0% | |
| CTGAAGCATATGGTGGCAAG+CGG | + | chr5.3:8326341-8326360 | MS.gene43535:CDS | 50.0% | |
| GGCAAGCGGCAAATTAGTGA+AGG | + | chr5.3:8326355-8326374 | MS.gene43535:CDS | 50.0% | |
| GGTGGTTTGAGCATGTAGAG+AGG | + | chr5.3:8325694-8325713 | MS.gene43535:intron | 50.0% | |
| TCTTGCCAGGTGAGAGCTTA+GGG | - | chr5.3:8326095-8326114 | None:intergenic | 50.0% | |
| TGACTGCAATATGGGGATCC+AGG | + | chr5.3:8324437-8324456 | MS.gene43535:CDS | 50.0% | |
| TGGGTGCTCCTAAGCAGAAA+TGG | + | chr5.3:8324032-8324051 | MS.gene43535:CDS | 50.0% | |
| TGTAGCAGACCCCACTTAGT+GGG | + | chr5.3:8325884-8325903 | MS.gene43535:intron | 50.0% | |
| TTCTTGCCAGGTGAGAGCTT+AGG | - | chr5.3:8326096-8326115 | None:intergenic | 50.0% | |
| ! | AATCTTTTGGCCTCCCTTCC+AGG | - | chr5.3:8326850-8326869 | None:intergenic | 50.0% |
| ! | TGCAAGTTTTGCCTTCTGCC+TGG | - | chr5.3:8324458-8324477 | None:intergenic | 50.0% |
| !! | ATGATAGTGGAAACAGGCGC+AGG | + | chr5.3:8325673-8325692 | MS.gene43535:intron | 50.0% |
| !! | CCTGCAAACTTTTCTGGCGA+AGG | + | chr5.3:8326444-8326463 | MS.gene43535:intron | 50.0% |
| AGCTGCAAAAGCAGTTGCGG+AGG | + | chr5.3:8326973-8326992 | MS.gene43535:CDS | 55.0% | |
| AGTTCCCCTAAGCTCTCACC+TGG | + | chr5.3:8326087-8326106 | MS.gene43535:intron | 55.0% | |
| CCTCCCTTCCAGGAGTAACA+AGG | - | chr5.3:8326840-8326859 | None:intergenic | 55.0% | |
| CCTTGTTACTCCTGGAAGGG+AGG | + | chr5.3:8326837-8326856 | MS.gene43535:CDS | 55.0% | |
| CTCGGGGACTTCCATTCTTC+TGG | + | chr5.3:8326009-8326028 | MS.gene43535:intron | 55.0% | |
| CTTGCCAGGTGAGAGCTTAG+GGG | - | chr5.3:8326094-8326113 | None:intergenic | 55.0% | |
| GAACTATGGCGGTCGAGGTT+GGG | - | chr5.3:8324525-8324544 | None:intergenic | 55.0% | |
| GCGGCAATGTCAGAACCCTT+TGG | - | chr5.3:8325183-8325202 | None:intergenic | 55.0% | |
| GGAGTAGTCAAATACGGGGC+TGG | + | chr5.3:8324085-8324104 | MS.gene43535:CDS | 55.0% | |
| GGCTTAGGAGCTGCAACTTC+TGG | - | chr5.3:8324556-8324575 | None:intergenic | 55.0% | |
| GGGATGTTGCGTTGGATGTG+TGG | + | chr5.3:8325578-8325597 | MS.gene43535:intron | 55.0% | |
| TGAACTATGGCGGTCGAGGT+TGG | - | chr5.3:8324526-8324545 | None:intergenic | 55.0% | |
| TGAGGCTGAGACAGCAGCAA+GGG | + | chr5.3:8327012-8327031 | MS.gene43535:CDS | 55.0% | |
| TGCTGTCTCAGCCTCAGCAA+TGG | - | chr5.3:8327008-8327027 | None:intergenic | 55.0% | |
| ! | ATAGTGGAAACAGGCGCAGG+TGG | + | chr5.3:8325676-8325695 | MS.gene43535:intron | 55.0% |
| !! | GAAGAGGCAGCTCTGAAAGC+TGG | + | chr5.3:8324064-8324083 | MS.gene43535:CDS | 55.0% |
| CTGAGGCTGAGACAGCAGCA+AGG | + | chr5.3:8327011-8327030 | MS.gene43535:CDS | 60.0% | |
| GGCAGAAGCTGCCATTGCTG+AGG | + | chr5.3:8326994-8327013 | MS.gene43535:CDS | 60.0% | |
| ! | GAGGGGTGTGACAGCTCAAG+AGG | + | chr5.3:8326940-8326959 | MS.gene43535:CDS | 60.0% |
| CTATGGCGGTCGAGGTTGGG+TGG | - | chr5.3:8324522-8324541 | None:intergenic | 65.0% | |
| GGCTGAGACAGCAGCAAGGG+AGG | + | chr5.3:8327015-8327034 | MS.gene43535:CDS | 65.0% | |
| TGGCGGTCGAGGTTGGGTGG+TGG | - | chr5.3:8324519-8324538 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 8324031 | 8327840 | 8324031 | ID=MS.gene43535 |
| chr5.3 | mRNA | 8324031 | 8327840 | 8324031 | ID=MS.gene43535.t1;Parent=MS.gene43535 |
| chr5.3 | exon | 8324031 | 8324180 | 8324031 | ID=MS.gene43535.t1.exon1;Parent=MS.gene43535.t1 |
| chr5.3 | CDS | 8324031 | 8324180 | 8324031 | ID=cds.MS.gene43535.t1;Parent=MS.gene43535.t1 |
| chr5.3 | exon | 8324415 | 8324623 | 8324415 | ID=MS.gene43535.t1.exon2;Parent=MS.gene43535.t1 |
| chr5.3 | CDS | 8324415 | 8324623 | 8324415 | ID=cds.MS.gene43535.t1;Parent=MS.gene43535.t1 |
| chr5.3 | exon | 8325137 | 8325221 | 8325137 | ID=MS.gene43535.t1.exon3;Parent=MS.gene43535.t1 |
| chr5.3 | CDS | 8325137 | 8325221 | 8325137 | ID=cds.MS.gene43535.t1;Parent=MS.gene43535.t1 |
| chr5.3 | exon | 8326293 | 8326376 | 8326293 | ID=MS.gene43535.t1.exon4;Parent=MS.gene43535.t1 |
| chr5.3 | CDS | 8326293 | 8326376 | 8326293 | ID=cds.MS.gene43535.t1;Parent=MS.gene43535.t1 |
| chr5.3 | exon | 8326773 | 8327125 | 8326773 | ID=MS.gene43535.t1.exon5;Parent=MS.gene43535.t1 |
| chr5.3 | CDS | 8326773 | 8327125 | 8326773 | ID=cds.MS.gene43535.t1;Parent=MS.gene43535.t1 |
| chr5.3 | exon | 8327744 | 8327840 | 8327744 | ID=MS.gene43535.t1.exon6;Parent=MS.gene43535.t1 |
| chr5.3 | CDS | 8327744 | 8327840 | 8327744 | ID=cds.MS.gene43535.t1;Parent=MS.gene43535.t1 |
| Gene Sequence |
| Protein sequence |
