AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43721

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43721.t1 MTR_5g069030 93.291 626 34 4 1 620 1 624 0.0 1181
MS.gene43721.t1 MTR_3g093050 48.645 664 267 15 1 634 1 620 0.0 554
MS.gene43721.t1 MTR_3g093050 48.649 666 237 16 1 634 1 593 0.0 551
MS.gene43721.t1 MTR_3g093040 69.091 220 61 1 16 235 99 311 8.84e-111 335
MS.gene43721.t1 MTR_6g477900 46.957 230 108 3 25 240 6 235 2.47e-58 196
MS.gene43721.t1 MTR_3g064580 62.500 152 56 1 25 175 6 157 4.94e-58 207
MS.gene43721.t1 MTR_2g064090 52.632 190 77 3 25 208 6 188 1.08e-57 198
MS.gene43721.t1 MTR_5g076850 61.589 151 58 0 25 175 6 156 1.26e-56 203
MS.gene43721.t1 MTR_5g014300 54.321 162 64 3 25 179 6 164 2.89e-52 183
MS.gene43721.t1 MTR_8g063550 50.955 157 77 0 20 176 1 157 2.08e-51 181
MS.gene43721.t1 MTR_3g070030 54.140 157 67 2 24 177 18 172 2.40e-51 181
MS.gene43721.t1 MTR_8g023860 54.839 155 61 4 21 172 8 156 7.61e-51 182
MS.gene43721.t1 MTR_8g063550 50.955 157 77 0 20 176 1 157 9.49e-51 182
MS.gene43721.t1 MTR_0036s0150 55.414 157 67 3 20 175 1 155 9.84e-51 184
MS.gene43721.t1 MTR_8g063550 50.955 157 77 0 20 176 1 157 1.08e-50 182
MS.gene43721.t1 MTR_2g086880 53.503 157 64 3 16 172 10 157 3.65e-50 182
MS.gene43721.t1 MTR_2g086880 53.503 157 64 3 16 172 10 157 4.64e-50 183
MS.gene43721.t1 MTR_8g023840 57.616 151 55 4 25 172 11 155 4.72e-50 179
MS.gene43721.t1 MTR_3g096140 38.258 264 136 4 28 278 10 259 7.08e-50 175
MS.gene43721.t1 MTR_4g036030 52.229 157 72 3 21 176 3 157 1.23e-49 176
MS.gene43721.t1 MTR_5g012080 51.899 158 73 3 21 176 3 159 3.07e-49 175
MS.gene43721.t1 MTR_4g098630 54.717 159 67 3 25 179 6 163 3.27e-49 174
MS.gene43721.t1 MTR_1g090723 53.691 149 68 1 28 175 11 159 1.48e-48 180
MS.gene43721.t1 MTR_3g096140 38.346 266 133 4 28 278 10 259 1.52e-48 174
MS.gene43721.t1 MTR_1g090723 54.362 149 66 2 28 175 11 158 2.78e-48 179
MS.gene43721.t1 MTR_1g090723 54.362 149 66 2 28 175 11 158 3.59e-48 179
MS.gene43721.t1 MTR_8g076110 47.826 161 81 2 25 184 6 164 9.04e-48 170
MS.gene43721.t1 MTR_4g101680 47.879 165 83 2 21 184 3 165 1.11e-47 172
MS.gene43721.t1 MTR_4g108760 53.254 169 68 4 15 175 2 167 1.16e-47 171
MS.gene43721.t1 MTR_1g097300 50.286 175 81 1 1 175 1 169 1.26e-47 176
MS.gene43721.t1 MTR_3g435150 44.589 231 106 7 15 229 2 226 3.43e-47 168
MS.gene43721.t1 MTR_7g011130 39.928 278 124 9 10 272 8 257 6.26e-47 169
MS.gene43721.t1 MTR_1g090720 53.205 156 67 1 28 177 45 200 6.99e-47 172
MS.gene43721.t1 MTR_3g096920 49.171 181 75 5 25 200 7 175 8.65e-47 167
MS.gene43721.t1 MTR_8g093580 47.134 157 83 0 20 176 1 157 9.07e-47 172
MS.gene43721.t1 MTR_4g035590 52.258 155 68 3 25 177 8 158 1.09e-46 169
MS.gene43721.t1 MTR_8g467490 50.307 163 68 4 28 179 17 177 1.11e-46 170
MS.gene43721.t1 MTR_5g021710 50.980 153 72 2 25 176 8 158 1.60e-46 168
MS.gene43721.t1 MTR_2g062730 51.613 155 71 3 25 177 10 162 1.71e-46 168
MS.gene43721.t1 MTR_4g081870 51.572 159 67 3 24 176 8 162 2.74e-46 165
MS.gene43721.t1 MTR_2g079990 50.000 164 77 2 12 175 6 164 2.99e-46 167
MS.gene43721.t1 MTR_6g084430 52.980 151 67 2 25 175 5 151 3.24e-46 166
MS.gene43721.t1 MTR_7g011120 44.385 187 91 3 24 199 7 191 1.31e-45 164
MS.gene43721.t1 MTR_6g012670 51.205 166 70 3 24 187 19 175 2.19e-45 164
MS.gene43721.t1 MTR_5g041940 50.307 163 65 3 24 177 2 157 5.88e-45 161
MS.gene43721.t1 MTR_7g085220 46.409 181 74 4 25 188 8 182 8.96e-45 163
MS.gene43721.t1 MTR_1g096430 51.316 152 71 2 25 175 7 156 9.11e-45 163
MS.gene43721.t1 MTR_5g040420 48.148 162 72 4 28 179 17 176 9.52e-45 164
MS.gene43721.t1 MTR_8g094580 50.943 159 67 4 24 176 6 159 1.76e-44 160
MS.gene43721.t1 MTR_8g023930 45.128 195 92 6 25 212 24 210 1.86e-44 166
MS.gene43721.t1 MTR_3g088110 51.266 158 67 4 24 176 6 158 2.33e-44 160
MS.gene43721.t1 MTR_6g032770 48.765 162 67 4 25 177 18 172 2.52e-44 163
MS.gene43721.t1 MTR_3g109340 54.248 153 65 3 25 175 22 171 7.37e-44 161
MS.gene43721.t1 MTR_2g080010 46.988 166 73 3 25 177 15 178 7.57e-44 160
MS.gene43721.t1 MTR_6g011860 46.552 174 81 3 12 175 2 173 8.34e-44 162
MS.gene43721.t1 MTR_4g134460 51.678 149 67 3 28 175 57 201 1.14e-43 162
MS.gene43721.t1 MTR_8g059170 50.920 163 74 3 20 179 9 168 1.33e-43 159
MS.gene43721.t1 MTR_3g109340 53.595 153 65 3 25 175 22 170 2.37e-43 159
MS.gene43721.t1 MTR_2g078700 51.852 162 62 4 25 177 23 177 3.69e-43 159
MS.gene43721.t1 MTR_8g024480 44.767 172 85 2 17 178 7 178 6.30e-43 160
MS.gene43721.t1 MTR_2g064470 50.311 161 65 4 24 178 10 161 7.42e-43 157
MS.gene43721.t1 MTR_2g079990 54.286 140 59 2 12 151 6 140 7.89e-43 159
MS.gene43721.t1 MTR_3g096920 58.594 128 50 2 24 151 6 130 9.23e-43 157
MS.gene43721.t1 MTR_1g008740 53.247 154 66 4 25 175 13 163 1.41e-42 157
MS.gene43721.t1 MTR_1g008740 53.247 154 66 4 25 175 27 177 1.50e-42 157
MS.gene43721.t1 MTR_3g070040 48.824 170 71 4 24 189 7 164 3.88e-42 155
MS.gene43721.t1 MTR_7g085260 50.000 162 63 4 25 175 17 171 6.79e-42 156
MS.gene43721.t1 MTR_8g023900 47.059 187 84 6 25 200 12 194 8.97e-42 158
MS.gene43721.t1 MTR_8g023900 44.724 199 94 7 27 218 195 384 6.37e-41 155
MS.gene43721.t1 MTR_3g096140 36.471 255 127 5 41 278 2 238 9.57e-42 154
MS.gene43721.t1 MTR_4g089135 45.556 180 71 4 25 179 15 192 9.84e-42 154
MS.gene43721.t1 MTR_7g005280 51.282 156 65 4 24 176 14 161 1.68e-41 151
MS.gene43721.t1 MTR_2157s0010 47.273 165 69 5 25 175 8 168 9.04e-41 149
MS.gene43721.t1 MTR_7g100990 37.849 251 133 8 24 260 10 251 9.55e-40 149
MS.gene43721.t1 MTR_3g116070 56.154 130 52 3 25 151 23 150 1.01e-39 149
MS.gene43721.t1 MTR_2g093810 44.693 179 86 6 25 196 14 186 3.58e-39 147
MS.gene43721.t1 MTR_1g069805 48.366 153 71 3 25 175 10 156 5.25e-39 145
MS.gene43721.t1 MTR_5g090970 48.466 163 69 6 25 175 19 178 2.47e-37 141
MS.gene43721.t1 MTR_4g075980 47.020 151 70 3 28 175 18 161 5.04e-37 140
MS.gene43721.t1 MTR_7g097090 47.682 151 71 3 25 173 10 154 6.75e-37 139
MS.gene43721.t1 MTR_2g068880 43.258 178 80 6 16 175 12 186 1.04e-36 140
MS.gene43721.t1 MTR_2g068920 49.275 138 64 3 19 151 14 150 1.66e-36 139
MS.gene43721.t1 MTR_3g098810 43.195 169 82 3 22 180 11 175 4.00e-36 136
MS.gene43721.t1 MTR_5g090970 46.626 163 71 6 25 175 19 177 4.78e-36 138
MS.gene43721.t1 MTR_8g099750 42.162 185 85 5 22 197 11 182 4.89e-36 135
MS.gene43721.t1 MTR_3g098810 47.761 134 62 2 22 151 11 140 2.46e-35 131
MS.gene43721.t1 MTR_8g023880 47.059 170 59 7 25 175 7 164 1.64e-34 132
MS.gene43721.t1 MTR_4g052620 42.038 157 82 5 25 173 5 160 9.11e-31 121
MS.gene43721.t1 MTR_2g086690 41.667 156 83 5 26 173 5 160 4.09e-30 119
MS.gene43721.t1 MTR_8g094580 54.455 101 37 3 82 176 8 105 2.72e-28 113
MS.gene43721.t1 MTR_7g105170 37.576 165 91 6 22 175 1 164 3.49e-28 114
MS.gene43721.t1 MTR_7g070140 48.101 79 39 1 75 151 12 90 1.93e-19 85.5
MS.gene43721.t1 MTR_4g094302 36.434 129 70 3 25 151 11 129 6.30e-19 84.7
MS.gene43721.t1 MTR_4g094302 36.434 129 70 3 25 151 11 129 7.55e-19 85.5
MS.gene43721.t1 MTR_7g083330 36.719 128 77 3 24 150 17 141 5.84e-16 77.0
MS.gene43721.t1 MTR_7g083360 35.433 127 78 3 25 150 10 133 3.25e-14 70.9
MS.gene43721.t1 MTR_8g093790 33.758 157 78 7 24 178 9 141 9.13e-14 70.5
MS.gene43721.t1 MTR_7g070150 46.774 62 30 1 123 184 8 66 7.50e-13 65.1
MS.gene43721.t1 MTR_3g096400 33.133 166 85 8 24 174 6 160 7.73e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43721.t1 AT4G35580 42.857 469 183 17 17 459 1 410 1.11e-97 310
MS.gene43721.t1 AT4G35580 42.857 469 183 17 17 459 1 410 1.18e-97 309
MS.gene43721.t1 AT4G35580 42.857 469 183 17 17 459 1 410 1.34e-97 309
MS.gene43721.t1 AT3G49530 39.485 466 175 16 15 459 3 382 5.21e-91 290
MS.gene43721.t1 AT3G49530 39.485 466 175 16 15 459 3 382 5.97e-91 288
MS.gene43721.t1 AT5G24590 45.954 346 122 11 15 330 3 313 9.48e-90 286
MS.gene43721.t1 AT1G33060 36.629 617 284 20 16 561 15 595 4.28e-89 290
MS.gene43721.t1 AT1G33060 36.689 586 304 18 16 578 15 556 4.71e-89 290
MS.gene43721.t1 AT3G17730 62.252 151 57 0 25 175 6 156 7.50e-61 203
MS.gene43721.t1 AT1G65910 54.054 185 77 1 25 201 6 190 1.67e-58 208
MS.gene43721.t1 AT5G17260 62.500 152 56 1 25 175 6 157 1.86e-57 201
MS.gene43721.t1 AT3G03200 62.500 152 56 1 25 175 6 157 2.33e-56 198
MS.gene43721.t1 AT3G10480 51.934 181 86 1 4 184 7 186 1.51e-53 190
MS.gene43721.t1 AT3G10480 52.717 184 81 3 4 184 7 187 1.59e-53 190
MS.gene43721.t1 AT3G10500 44.889 225 114 3 21 243 5 221 1.72e-53 192
MS.gene43721.t1 AT3G10490 50.820 183 87 2 3 184 7 187 1.83e-53 183
MS.gene43721.t1 AT3G10490 50.820 183 87 2 3 184 7 187 5.96e-52 186
MS.gene43721.t1 AT4G17980 42.683 246 106 6 25 243 6 243 1.05e-51 179
MS.gene43721.t1 AT4G17980 42.683 246 106 6 25 243 6 243 1.64e-51 180
MS.gene43721.t1 AT5G04410 53.548 155 72 0 21 175 5 159 7.45e-51 185
MS.gene43721.t1 AT5G46590 54.140 157 66 3 25 177 6 160 8.22e-51 178
MS.gene43721.t1 AT1G54330 58.278 151 60 1 25 175 6 153 3.28e-50 177
MS.gene43721.t1 AT1G62700 52.229 157 72 3 21 176 3 157 7.13e-50 178
MS.gene43721.t1 AT1G62700 52.229 157 72 3 21 176 3 157 7.13e-50 178
MS.gene43721.t1 AT1G12260 51.592 157 73 3 21 176 3 157 1.70e-49 176
MS.gene43721.t1 AT1G12260 51.592 157 73 3 21 176 3 157 2.99e-49 177
MS.gene43721.t1 AT5G46590 59.375 128 51 1 25 151 6 133 4.41e-49 173
MS.gene43721.t1 AT5G39610 55.844 154 64 2 25 176 20 171 6.43e-49 172
MS.gene43721.t1 AT5G07680 55.063 158 57 3 25 175 3 153 8.43e-49 173
MS.gene43721.t1 AT5G07680 55.063 158 57 3 25 175 17 167 1.16e-48 173
MS.gene43721.t1 AT5G62380 49.091 165 81 2 21 184 3 165 1.68e-48 173
MS.gene43721.t1 AT5G62380 49.091 165 81 2 21 184 3 165 1.68e-48 173
MS.gene43721.t1 AT4G10350 52.597 154 72 1 25 177 9 162 1.96e-48 173
MS.gene43721.t1 AT5G61430 55.556 153 64 2 25 175 16 166 1.99e-48 173
MS.gene43721.t1 AT2G27300 40.664 241 112 6 20 252 9 226 2.48e-48 172
MS.gene43721.t1 AT1G33280 51.534 163 75 2 25 186 8 167 3.61e-48 171
MS.gene43721.t1 AT3G44290 55.172 145 57 2 28 172 17 153 5.99e-48 168
MS.gene43721.t1 AT1G32510 51.829 164 71 2 25 180 6 169 1.23e-47 169
MS.gene43721.t1 AT4G27410 50.000 168 79 2 12 179 4 166 1.58e-47 169
MS.gene43721.t1 AT3G44290 55.172 145 57 2 28 172 17 153 6.92e-47 169
MS.gene43721.t1 AT5G08790 53.459 159 62 4 25 176 7 160 8.88e-47 167
MS.gene43721.t1 AT3G10480 44.700 217 81 4 4 184 7 220 1.07e-46 173
MS.gene43721.t1 AT3G29035 56.291 151 62 3 25 173 24 172 1.10e-46 167
MS.gene43721.t1 AT5G22290 52.000 150 65 2 28 177 24 166 1.69e-46 167
MS.gene43721.t1 AT4G36160 50.327 153 73 2 25 176 10 160 2.20e-46 168
MS.gene43721.t1 AT4G36160 50.327 153 73 2 25 176 10 160 2.20e-46 168
MS.gene43721.t1 AT4G36160 50.327 153 73 2 25 176 14 164 2.75e-46 168
MS.gene43721.t1 AT3G15500 50.303 165 77 2 12 176 4 163 3.09e-46 166
MS.gene43721.t1 AT2G18060 50.327 153 73 2 25 176 9 159 5.46e-46 167
MS.gene43721.t1 AT2G18060 50.327 153 73 2 25 176 9 159 5.46e-46 167
MS.gene43721.t1 AT1G69490 48.521 169 77 3 17 179 1 165 7.93e-46 164
MS.gene43721.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.54e-46 169
MS.gene43721.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.54e-46 169
MS.gene43721.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.54e-46 169
MS.gene43721.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.54e-46 169
MS.gene43721.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.54e-46 169
MS.gene43721.t1 AT1G52890 49.697 165 78 2 12 176 4 163 1.99e-45 164
MS.gene43721.t1 AT3G18400 53.289 152 66 3 25 175 5 152 2.12e-45 164
MS.gene43721.t1 AT5G66300 49.673 153 75 2 25 176 12 163 2.40e-45 163
MS.gene43721.t1 AT5G63790 53.459 159 62 5 25 176 50 203 5.05e-45 163
MS.gene43721.t1 AT5G63790 53.459 159 62 5 25 176 60 213 5.27e-45 163
MS.gene43721.t1 AT2G24430 53.548 155 67 3 25 177 16 167 6.19e-45 162
MS.gene43721.t1 AT2G24430 53.548 155 67 3 25 177 16 167 6.19e-45 162
MS.gene43721.t1 AT5G64060 50.676 148 73 0 28 175 9 156 1.15e-44 163
MS.gene43721.t1 AT2G02450 51.007 149 68 3 28 175 54 198 1.39e-44 164
MS.gene43721.t1 AT1G26870 44.920 187 86 4 28 199 19 203 1.44e-44 164
MS.gene43721.t1 AT2G02450 51.007 149 68 3 28 175 54 198 1.54e-44 164
MS.gene43721.t1 AT1G76420 52.941 153 67 3 25 175 22 171 1.89e-44 162
MS.gene43721.t1 AT4G27410 45.902 183 81 2 12 179 4 183 2.18e-44 161
MS.gene43721.t1 AT1G34190 55.405 148 66 0 28 175 19 166 2.46e-44 167
MS.gene43721.t1 AT3G04060 51.534 163 64 4 25 179 20 175 3.96e-44 161
MS.gene43721.t1 AT1G34180 53.378 148 69 0 28 175 19 166 4.79e-44 164
MS.gene43721.t1 AT5G18270 49.153 177 80 4 14 182 5 179 4.93e-44 160
MS.gene43721.t1 AT3G04070 47.126 174 78 5 25 186 10 181 5.63e-44 161
MS.gene43721.t1 AT5G18270 49.153 177 80 4 14 182 5 179 7.60e-44 160
MS.gene43721.t1 AT3G15170 43.119 218 99 7 25 233 20 221 8.76e-44 159
MS.gene43721.t1 AT1G56010 48.795 166 69 4 24 180 18 176 1.14e-43 159
MS.gene43721.t1 AT2G46770 42.289 201 93 5 17 194 8 208 1.61e-43 160
MS.gene43721.t1 AT1G71930 48.684 152 75 2 25 175 9 158 2.25e-43 159
MS.gene43721.t1 AT1G71930 48.684 152 75 2 25 175 9 158 2.25e-43 159
MS.gene43721.t1 AT1G34180 53.378 148 69 0 28 175 19 166 2.51e-43 164
MS.gene43721.t1 AT1G01720 49.689 161 70 4 22 176 4 159 2.91e-43 157
MS.gene43721.t1 AT2G33480 53.247 154 65 3 24 176 14 161 3.69e-43 156
MS.gene43721.t1 AT5G13180 50.323 155 69 3 24 176 13 161 8.94e-43 155
MS.gene43721.t1 AT3G12977 44.920 187 94 5 25 205 18 201 9.74e-43 155
MS.gene43721.t1 AT1G32770 45.506 178 74 4 17 177 8 179 1.22e-42 157
MS.gene43721.t1 AT5G39820 45.665 173 69 5 28 177 23 193 1.32e-42 157
MS.gene43721.t1 AT2G33480 51.634 153 67 2 24 176 14 159 6.30e-42 153
MS.gene43721.t1 AT1G77450 48.101 158 72 4 24 176 9 161 8.34e-42 152
MS.gene43721.t1 AT1G61110 50.000 164 67 4 25 175 16 177 1.12e-41 154
MS.gene43721.t1 AT2G43000 47.097 155 78 3 23 175 15 167 1.58e-41 152
MS.gene43721.t1 AT3G04070 43.158 190 78 5 25 186 10 197 1.76e-41 154
MS.gene43721.t1 AT5G53950 50.888 169 65 5 25 184 17 176 7.09e-41 153
MS.gene43721.t1 AT1G34180 49.375 160 69 1 28 175 19 178 7.77e-41 155
MS.gene43721.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.70e-40 152
MS.gene43721.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.70e-40 152
MS.gene43721.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.70e-40 152
MS.gene43721.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.70e-40 152
MS.gene43721.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.70e-40 152
MS.gene43721.t1 AT3G61910 41.573 178 84 3 17 177 3 177 2.25e-40 150
MS.gene43721.t1 AT3G15510 46.341 164 73 3 29 179 21 182 2.42e-40 151
MS.gene43721.t1 AT1G34180 49.375 160 69 1 28 175 19 178 4.01e-40 155
MS.gene43721.t1 AT2G17040 36.154 260 146 6 28 274 9 261 2.95e-38 143
MS.gene43721.t1 AT4G28530 46.591 176 69 5 24 180 9 178 4.19e-38 145
MS.gene43721.t1 AT5G04395 45.714 140 62 2 25 150 28 167 5.99e-37 136
MS.gene43721.t1 AT1G32870 51.634 153 70 2 25 175 10 160 7.38e-37 145
MS.gene43721.t1 AT1G32870 51.634 153 70 2 25 175 10 160 8.20e-37 145
MS.gene43721.t1 AT1G32870 51.634 153 70 2 25 175 46 196 1.94e-36 144
MS.gene43721.t1 AT3G12910 41.837 196 82 9 1 175 1 185 5.55e-36 137
MS.gene43721.t1 AT4G01550 40.884 181 91 5 27 199 6 178 7.82e-36 140
MS.gene43721.t1 AT1G52880 46.626 163 73 4 29 179 21 181 7.13e-35 135
MS.gene43721.t1 AT5G61430 60.204 98 37 1 80 175 6 103 1.71e-33 129
MS.gene43721.t1 AT1G02230 42.045 176 86 8 26 193 4 171 2.06e-32 129
MS.gene43721.t1 AT3G12977 45.736 129 65 2 82 205 20 148 1.23e-30 120
MS.gene43721.t1 AT4G01520 36.066 183 91 6 22 196 1 165 1.27e-30 122
MS.gene43721.t1 AT4G10350 54.167 96 44 0 82 177 20 115 2.22e-30 121
MS.gene43721.t1 AT4G01540 35.955 178 88 6 27 196 6 165 4.58e-29 120
MS.gene43721.t1 AT4G01540 35.955 178 88 6 27 196 6 165 4.64e-29 120
MS.gene43721.t1 AT5G22380 40.361 166 92 5 23 181 3 168 5.99e-29 115
MS.gene43721.t1 AT4G01540 35.955 178 88 6 27 196 6 165 9.21e-29 119
MS.gene43721.t1 AT1G02250 38.660 194 103 9 26 211 4 189 1.01e-28 118
MS.gene43721.t1 AT4G01540 35.955 178 88 6 27 196 6 165 1.04e-28 120
MS.gene43721.t1 AT3G44350 38.650 163 95 4 24 181 4 166 5.55e-28 113
MS.gene43721.t1 AT1G56010 49.138 116 44 3 73 180 1 109 1.37e-27 112
MS.gene43721.t1 AT3G04420 39.062 192 98 6 26 206 4 187 2.58e-27 112
MS.gene43721.t1 AT3G04420 39.062 192 98 6 26 206 4 187 4.01e-27 113
MS.gene43721.t1 AT2G33480 48.077 104 54 0 73 176 1 104 1.01e-26 108
MS.gene43721.t1 AT3G44350 41.667 132 73 3 24 151 4 135 3.72e-26 105
MS.gene43721.t1 AT1G01010 39.264 163 82 4 27 179 5 160 6.34e-26 111
MS.gene43721.t1 AT3G10490 57.471 87 36 1 99 184 1 87 4.14e-24 104
MS.gene43721.t1 AT3G10490 57.471 87 36 1 99 184 1 87 4.14e-24 104
MS.gene43721.t1 AT1G02220 39.073 151 80 4 26 173 4 145 9.52e-23 101
MS.gene43721.t1 AT4G28530 47.273 110 40 2 24 117 9 116 3.18e-21 95.5
MS.gene43721.t1 AT2G43000 46.512 86 45 1 91 175 4 89 1.11e-18 85.1
MS.gene43721.t1 AT2G18060 50.704 71 33 1 106 176 3 71 2.38e-18 86.3
MS.gene43721.t1 AT5G64530 36.719 128 65 4 25 150 3 116 4.19e-18 82.4
MS.gene43721.t1 AT5G64530 30.108 186 92 6 25 194 3 166 1.54e-17 81.6
MS.gene43721.t1 AT5G22290 51.389 72 29 1 106 177 2 67 2.52e-17 82.4
MS.gene43721.t1 AT5G14000 31.783 129 82 2 24 150 14 138 2.49e-14 71.2
MS.gene43721.t1 AT3G55210 29.448 163 95 6 25 173 11 167 7.84e-14 72.8
MS.gene43721.t1 AT5G50820 33.333 132 74 4 24 151 16 137 7.84e-14 70.9
MS.gene43721.t1 AT3G04430 34.559 136 75 5 31 154 6 139 1.03e-13 70.9
MS.gene43721.t1 AT5G14000 31.783 129 82 2 24 150 14 138 5.04e-13 68.9
MS.gene43721.t1 AT3G56530 27.152 151 105 3 25 173 52 199 6.82e-13 70.5
MS.gene43721.t1 AT1G25580 27.311 238 140 9 25 248 58 276 7.57e-13 71.6
MS.gene43721.t1 AT4G28500 30.303 165 89 8 7 151 41 199 9.68e-12 67.0

Find 179 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTATTGCTTGTTAATATT+TGG 0.124257 5.1:+53589354 MS.gene43721:CDS
GCACACTTTCCACCAGAATT+TGG 0.222116 5.1:+53588137 MS.gene43721:CDS
ATATGAACAATCGAGGATTT+TGG 0.229784 5.1:+53588932 MS.gene43721:CDS
AGTATTGCTTGTTAATATTT+GGG 0.242660 5.1:+53589355 MS.gene43721:CDS
TCCACCAGAATTTGGCTATC+AGG 0.273763 5.1:+53588145 MS.gene43721:CDS
TATTTCTTCTGGAGAGTAAT+TGG 0.283362 5.1:-53587707 None:intergenic
ATGGAAACGGTGATGAAGTT+TGG 0.293664 5.1:+53586181 MS.gene43721:CDS
AGGTCAGACTGTATTTCTTC+TGG 0.294408 5.1:-53587718 None:intergenic
TGCCGTTAGGGTTCCGCTTC+CGG 0.296315 5.1:+53586112 MS.gene43721:CDS
TCGATGGCGGCACTGGAATT+AGG 0.299505 5.1:+53588757 MS.gene43721:CDS
CTTCCTTGTGCTTGCATCAC+CGG 0.303512 5.1:-53588822 None:intergenic
TGAATCACTGGGTTCATGTT+TGG 0.314659 5.1:-53589008 None:intergenic
TTGAACCGTGCAACAACTAA+TGG 0.323996 5.1:+53587113 MS.gene43721:CDS
TGCTTGCATCACCGGGTTCA+TGG 0.325353 5.1:-53588814 None:intergenic
CTACCTTGTGCTTGAATCAC+TGG 0.326312 5.1:-53589020 None:intergenic
GTGGAAAGTGTGCATGGGCC+GGG 0.342088 5.1:-53588127 None:intergenic
CATTTACCACAGTGGTCATT+TGG 0.343804 5.1:-53588701 None:intergenic
TGGACAGTGACACTGGTATA+AGG 0.358495 5.1:+53588952 MS.gene43721:CDS
TTGGCCTGATAGCCAAATTC+TGG 0.370776 5.1:-53588149 None:intergenic
AACAATGAATTAATTCAGTA+TGG 0.382424 5.1:+53588170 MS.gene43721:CDS
AACAAGCGACAAAGGACATA+TGG 0.385126 5.1:-53587610 None:intergenic
AGTAGACCGCATAGCGCTAA+TGG 0.386764 5.1:-53589297 None:intergenic
ATACTGAATTAATTCATTGT+TGG 0.391012 5.1:-53588168 None:intergenic
TTTCAACTCGTGTGTTAATT+GGG 0.393985 5.1:+53588220 MS.gene43721:CDS
TGGAAACGGTGATGAAGTTT+GGG 0.404121 5.1:+53586182 MS.gene43721:CDS
CGAAGGGGACGAGGACTCAT+TGG 0.406168 5.1:+53587231 MS.gene43721:CDS
ATTGCTTCCTCAGAGTTCTC+AGG 0.411769 5.1:-53587802 None:intergenic
GGTGGAAAGTGTGCATGGGC+CGG 0.412198 5.1:-53588128 None:intergenic
CTACGCTGGTCGGGCTCCGA+AGG 0.413682 5.1:+53587214 MS.gene43721:CDS
AAGTCTGGTGCTACCTTGAT+TGG 0.414025 5.1:+53587170 MS.gene43721:CDS
ACTTTCTGTTGGGCAGGGTT+CGG 0.421621 5.1:+53589255 MS.gene43721:CDS
TTCCTTGTGCTTGCATCACC+GGG 0.423967 5.1:-53588821 None:intergenic
TGCATATTCTGCCATTGTAA+TGG 0.426415 5.1:+53589325 MS.gene43721:CDS
CAGCGACTCGGATGTGGAAA+TGG 0.427111 5.1:+53588319 MS.gene43721:CDS
TATCATTAGAAAGAATCATC+TGG 0.431163 5.1:-53588671 None:intergenic
ACTGTTGTCGATGGCGGCAC+TGG 0.435924 5.1:+53588750 MS.gene43721:CDS
TTAATTCAGTATGGTACAAA+CGG 0.441461 5.1:+53588179 MS.gene43721:CDS
GGAAGACCAGCTGTTAAACT+TGG 0.444270 5.1:+53588049 MS.gene43721:intron
TCACTGAACAAGCTGCCGTT+AGG 0.446779 5.1:+53586099 MS.gene43721:CDS
GTCGGGCTCCGAAGGGGACG+AGG 0.452151 5.1:+53587222 MS.gene43721:CDS
TTCGGATACTTCCGATCCAT+TGG 0.452190 5.1:-53587080 None:intergenic
TGTTTGTAAATTTGAGCCTT+GGG 0.455207 5.1:+53586221 MS.gene43721:CDS
ATATGAGCAAATGTGGAATT+CGG 0.456375 5.1:+53588725 MS.gene43721:CDS
TACAAAAGATGAGAGTTTGC+AGG 0.457897 5.1:+53589103 MS.gene43721:CDS
TGCATCACCGGGTTCATGGC+TGG 0.458827 5.1:-53588810 None:intergenic
TCTGAGGAGACGACGGAAGA+TGG 0.460186 5.1:+53588894 MS.gene43721:CDS
CCTACCTTAAAAGAGCTTGA+TGG 0.460227 5.1:+53587272 MS.gene43721:CDS
AGTCTTCTTCATTCCAATCA+AGG 0.464930 5.1:-53587183 None:intergenic
GTCGCTAGTGAGGAAGATAA+AGG 0.471049 5.1:-53587751 None:intergenic
TACAACTGCAGAATCTAACT+TGG 0.472510 5.1:+53589223 MS.gene43721:CDS
TATCTGAGGATGAAGATCAA+TGG 0.476744 5.1:+53586162 MS.gene43721:CDS
GTCGCAACAAGCGGAGGAGC+TGG 0.476862 5.1:+53586068 MS.gene43721:CDS
ATGTTTGTAAATTTGAGCCT+TGG 0.478978 5.1:+53586220 MS.gene43721:CDS
TGAACCGTGCAACAACTAAT+GGG 0.480349 5.1:+53587114 MS.gene43721:CDS
TACGCTGGTCGGGCTCCGAA+GGG 0.481533 5.1:+53587215 MS.gene43721:CDS
CAAGCTCCTCGTCGGTAGGC+CGG 0.483643 5.1:-53586131 None:intergenic
AATACAGTCTGACCTAAGTC+TGG 0.484416 5.1:+53587726 MS.gene43721:CDS
AGATGAGAGTAGACCTGTCC+AGG 0.485145 5.1:-53587302 None:intergenic
CAATGAGTCCTCGTCCCCTT+CGG 0.485305 5.1:-53587230 None:intergenic
ACAGATCTCTCTTGCTGACA+TGG 0.487787 5.1:-53589189 None:intergenic
ACTCCGCAAAATAGTGATGT+AGG 0.490578 5.1:+53588630 MS.gene43721:CDS
GAGCTTGATGGCACCAACCC+TGG 0.490651 5.1:+53587284 MS.gene43721:CDS
GGGAGATGTCTTCTCTGAAT+CGG 0.491871 5.1:-53589168 None:intergenic
CATGCATCGCTATAGCAATC+AGG 0.492185 5.1:-53587844 None:intergenic
GTGCAACAACTAATGGGTAT+TGG 0.492493 5.1:+53587120 MS.gene43721:CDS
CACTGAACAAGCTGCCGTTA+GGG 0.492570 5.1:+53586100 MS.gene43721:CDS
TTGTAGATTTATCGATCGTA+AGG 0.496524 5.1:+53587027 MS.gene43721:intron
TGGAAAGTGTGCATGGGCCG+GGG 0.497637 5.1:-53588126 None:intergenic
ACGATTTGAGCTTGAGCCAT+GGG 0.499250 5.1:+53588088 MS.gene43721:CDS
TTTGAGCCTTGGGATTTGCC+TGG 0.499957 5.1:+53586231 MS.gene43721:CDS
AAGACTGATAGACGCCTCAC+TGG 0.500018 5.1:-53588252 None:intergenic
CCTCGTCGGTAGGCCGGAAG+CGG 0.502257 5.1:-53586125 None:intergenic
GAAGGGGACGAGGACTCATT+GGG 0.503369 5.1:+53587232 MS.gene43721:CDS
CTGAGGAGACGACGGAAGAT+GGG 0.508026 5.1:+53588895 MS.gene43721:CDS
CGGTTCAATCTGCTCCCATT+CGG 0.508786 5.1:-53587098 None:intergenic
GCTGTTACTAACCATCATAT+TGG 0.508994 5.1:-53588342 None:intergenic
TGCACCAAGGAGAATACGAT+TGG 0.510811 5.1:+53588845 MS.gene43721:CDS
AAAGATCGAAGGATCAAGTC+TGG 0.512532 5.1:+53587155 MS.gene43721:CDS
AGATGAGAGTTTGCAGGAGA+CGG 0.513317 5.1:+53589109 MS.gene43721:CDS
ACAAGCGACAAAGGACATAT+GGG 0.513337 5.1:-53587609 None:intergenic
TGATGGCACCAACCCTGGAC+AGG 0.515668 5.1:+53587289 MS.gene43721:CDS
GTCGTGCAGCGACTCGGATG+TGG 0.519491 5.1:+53588313 MS.gene43721:CDS
CCGTCGTCTCCTCAGAAACA+AGG 0.519813 5.1:-53588887 None:intergenic
CCTCCCAATCGTATTCTCCT+TGG 0.520034 5.1:-53588849 None:intergenic
CAAGCATTCCCTTGTTTCCG+AGG 0.521043 5.1:+53589076 MS.gene43721:CDS
GTGACACTGGTATAAGGATA+AGG 0.523174 5.1:+53588958 MS.gene43721:CDS
TACCTTGTGCTTGAATCACT+GGG 0.526925 5.1:-53589019 None:intergenic
TAATTCAGTATGGTACAAAC+GGG 0.529323 5.1:+53588180 MS.gene43721:CDS
TTGTAGTCTCCTCGGAAACA+AGG 0.529566 5.1:-53589085 None:intergenic
TGCGCGTTCCCTTGTTTCTG+AGG 0.529631 5.1:+53588878 MS.gene43721:CDS
GATTCTTTCTAATGATAGCA+TGG 0.532361 5.1:+53588677 MS.gene43721:CDS
CACGATTTGAGCTTGAGCCA+TGG 0.532975 5.1:+53588087 MS.gene43721:CDS
ATATGTCCAAGTTTAACAGC+TGG 0.536412 5.1:-53588055 None:intergenic
AAGATAAAGGAACCAGACTT+AGG 0.537020 5.1:-53587738 None:intergenic
ACGCTGGTCGGGCTCCGAAG+GGG 0.537215 5.1:+53587216 MS.gene43721:CDS
GCCCCGCGTAGAATACGATT+AGG 0.540078 5.1:+53589044 MS.gene43721:CDS
TTTAGAAGTACCGGCTGCAG+AGG 0.540263 5.1:+53587894 MS.gene43721:CDS
ATTCTTTCTAATGATAGCAT+GGG 0.541301 5.1:+53588678 MS.gene43721:CDS
GCGGCACTGGAATTAGGATA+AGG 0.543075 5.1:+53588763 MS.gene43721:CDS
GTATTGCTTGTTAATATTTG+GGG 0.547201 5.1:+53589356 MS.gene43721:CDS
AATGGGTATTGGAAGGCGAC+AGG 0.549560 5.1:+53587131 MS.gene43721:CDS
ATCATTAGAAAGAATCATCT+GGG 0.552168 5.1:-53588670 None:intergenic
ACAACTGCAGAATCTAACTT+GGG 0.553401 5.1:+53589224 MS.gene43721:CDS
ACATCAGAGTTTAGAAGTAC+CGG 0.554540 5.1:+53587885 MS.gene43721:CDS
TAAATGAATATGAGCAAATG+TGG 0.557259 5.1:+53588718 MS.gene43721:CDS
TTGCTTCCTCAGAGTTCTCA+GGG 0.559559 5.1:-53587801 None:intergenic
TCCTCCGCTTGTTGCGACGA+CGG 0.566139 5.1:-53586063 None:intergenic
AATACCCATTAGTTGTTGCA+CGG 0.566537 5.1:-53587118 None:intergenic
AGGATGAAGATCAATGGAAA+CGG 0.566653 5.1:+53586168 MS.gene43721:CDS
CTCCTAATCGTATTCTACGC+GGG 0.566860 5.1:-53589046 None:intergenic
AAATGGGTCGTGCAGCGACT+CGG 0.567183 5.1:+53588307 MS.gene43721:CDS
AGTTCTCAGGGATAGCTGCT+AGG 0.567787 5.1:-53587789 None:intergenic
TCAACAAGCTCCTCGTCGGT+AGG 0.569226 5.1:-53586135 None:intergenic
GAGAATAACTTATCATCCCA+TGG 0.570032 5.1:-53588104 None:intergenic
AGAGTAGACCTGTCCAGGGT+TGG 0.572395 5.1:-53587297 None:intergenic
TTCATCTTCTGTCGCTAGTG+AGG 0.575075 5.1:-53587761 None:intergenic
GGCCGGAAGCGGAACCCTAA+CGG 0.575633 5.1:-53586114 None:intergenic
TGGATCGGAAGTATCCGAAT+GGG 0.576646 5.1:+53587084 MS.gene43721:CDS
GCTTCTTAAACAAGCGACAA+AGG 0.577150 5.1:-53587618 None:intergenic
CAGATCTCTCTTGCTGACAT+GGG 0.580999 5.1:-53589188 None:intergenic
CAGCACTCTCAGCAGCAGCA+TGG 0.584530 5.1:-53589145 None:intergenic
TGTGGAAATGGCCAATATGA+TGG 0.586555 5.1:+53588331 MS.gene43721:CDS
GCCCATCTTACCTCTGCAGC+CGG 0.589631 5.1:-53587904 None:intergenic
TCGGATACTGTTGTCGATGG+CGG 0.589834 5.1:+53588744 MS.gene43721:CDS
TTCACCGTCGTCGCAACAAG+CGG 0.590243 5.1:+53586059 MS.gene43721:CDS
CACTAGCGACAGAAGATGAA+AGG 0.590698 5.1:+53587764 MS.gene43721:CDS
CTCCGCAAAATAGTGATGTA+GGG 0.592820 5.1:+53588631 MS.gene43721:CDS
GCCTGATAGCCAAATTCTGG+TGG 0.593697 5.1:-53588146 None:intergenic
GCATCGCTATAGCAATCAGG+TGG 0.595012 5.1:-53587841 None:intergenic
GCACCAAGGAGAATACGATT+GGG 0.595669 5.1:+53588846 MS.gene43721:CDS
GGATGATAAGTTATTCTCCC+CGG 0.597516 5.1:+53588109 MS.gene43721:CDS
AACCCGGTGATGCAAGCACA+AGG 0.605040 5.1:+53588819 MS.gene43721:CDS
GATGAGAGTAGACCTGTCCA+GGG 0.605085 5.1:-53587301 None:intergenic
ATTCTGGTGGAAAGTGTGCA+TGG 0.605566 5.1:-53588133 None:intergenic
TTCTGGTGGAAAGTGTGCAT+GGG 0.610163 5.1:-53588132 None:intergenic
TTCTTACCAGGCAAATCCCA+AGG 0.611213 5.1:-53586237 None:intergenic
TTTATCGATCGTAAGGAACA+AGG 0.615540 5.1:+53587034 MS.gene43721:CDS
AACAACTAATGGGTATTGGA+AGG 0.616614 5.1:+53587124 MS.gene43721:CDS
AATTCGGATACTGTTGTCGA+TGG 0.617050 5.1:+53588741 MS.gene43721:CDS
TGTAGTCTCCTCGGAAACAA+GGG 0.617655 5.1:-53589084 None:intergenic
CCTTGTTTCTGAGGAGACGA+CGG 0.620782 5.1:+53588887 MS.gene43721:CDS
ATGGCTCAAGCTCAAATCGT+GGG 0.621257 5.1:-53588085 None:intergenic
CATCGCTATAGCAATCAGGT+GGG 0.621468 5.1:-53587840 None:intergenic
CCGCTTCCGGCCTACCGACG+AGG 0.622393 5.1:+53586125 MS.gene43721:CDS
ATGGATCGGAAGTATCCGAA+TGG 0.622532 5.1:+53587083 MS.gene43721:CDS
CCGCGTAGAATACGATTAGG+AGG 0.622604 5.1:+53589047 MS.gene43721:CDS
AAGTTCAAACTGTGGTGAAG+CGG 0.625096 5.1:+53587657 MS.gene43721:CDS
TGAACAACCAGCCATGAACC+CGG 0.628458 5.1:+53588803 MS.gene43721:CDS
GCATCACATGATTATCCAGA+GGG 0.629292 5.1:+53588603 MS.gene43721:CDS
CATGGCTCAAGCTCAAATCG+TGG 0.630025 5.1:-53588086 None:intergenic
GCAACAAGCGGAGGAGCTGG+CGG 0.630298 5.1:+53586071 MS.gene43721:CDS
CTCATATTCATTTACCACAG+TGG 0.633818 5.1:-53588709 None:intergenic
TCCTAATCGTATTCTACGCG+GGG 0.637438 5.1:-53589045 None:intergenic
ACCGTCGTCGCAACAAGCGG+AGG 0.637547 5.1:+53586062 MS.gene43721:CDS
AAAATCAACAAGCTCCTCGT+CGG 0.639154 5.1:-53586139 None:intergenic
CATCAGAATATGAACAATCG+AGG 0.642537 5.1:+53588925 MS.gene43721:CDS
GGAGAGTAATTGGCAGTCGT+AGG 0.642617 5.1:-53587697 None:intergenic
CGACGGTGAACACTCAACTA+CGG 0.643070 5.1:-53586046 None:intergenic
AGGCGACAGGAAAAGATCGA+AGG 0.646724 5.1:+53587144 MS.gene43721:CDS
AATCAGGTGGGGTTATAACG+TGG 0.648862 5.1:-53587828 None:intergenic
CCAAGGAGAATACGATTGGG+AGG 0.651383 5.1:+53588849 MS.gene43721:CDS
ATCAGGTGGGGTTATAACGT+GGG 0.651782 5.1:-53587827 None:intergenic
CGTCGTCTCCTCAGAAACAA+GGG 0.652580 5.1:-53588886 None:intergenic
TACTAGCGAGACCATTACAA+TGG 0.671283 5.1:-53589336 None:intergenic
ACACTGGTATAAGGATAAGG+AGG 0.673680 5.1:+53588961 MS.gene43721:CDS
AGCATCACATGATTATCCAG+AGG 0.675169 5.1:+53588602 MS.gene43721:CDS
ATCGCTATAGCAATCAGGTG+GGG 0.678426 5.1:-53587839 None:intergenic
AGACCGCATAGCGCTAATGG+AGG 0.680239 5.1:-53589294 None:intergenic
AACCCAGTGATTCAAGCACA+AGG 0.683254 5.1:+53589017 MS.gene43721:CDS
CCTCCTAATCGTATTCTACG+CGG 0.684086 5.1:-53589047 None:intergenic
CATCCTCCATTAGCGCTATG+CGG 0.691292 5.1:+53589291 MS.gene43721:CDS
CAACTGCAGAATCTAACTTG+GGG 0.701090 5.1:+53589225 MS.gene43721:CDS
TTGGGACGAGTTCTCCAGTG+AGG 0.712013 5.1:+53588238 MS.gene43721:CDS
AGCTATCCCTGAGAACTCTG+AGG 0.720586 5.1:+53587795 MS.gene43721:CDS
ATTAGGATAAGGTCTAGACA+AGG 0.726784 5.1:+53588774 MS.gene43721:CDS
AAGCACAAGGAAGTGCACCA+AGG 0.746045 5.1:+53588832 MS.gene43721:CDS
TAAGGAACAAGGATCCAGAG+TGG 0.758355 5.1:+53587045 MS.gene43721:CDS
AGTCTTGCAAGTTCAAACTG+TGG 0.773510 5.1:+53587649 MS.gene43721:CDS
CATGGGCCAAATGACCACTG+TGG 0.787507 5.1:+53588695 MS.gene43721:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTATTGTATATATGT+CGG + chr5.1:53588511-53588530 MS.gene43721:intron 10.0%
!!! GTTTTTTTTTTTTTTTTCTA+TGG + chr5.1:53586467-53586486 MS.gene43721:intron 10.0%
!! AACATAAAATAAAAAAAGAG+AGG - chr5.1:53587328-53587347 None:intergenic 15.0%
!! AATAAAAAAAAATTCTTACC+AGG - chr5.1:53586252-53586271 None:intergenic 15.0%
!! ATAATTATCTATAATTGCTT+AGG - chr5.1:53587547-53587566 None:intergenic 15.0%
!! ATACAATAAAATTTGTGTTA+AGG - chr5.1:53588505-53588524 None:intergenic 15.0%
!! TTGATATGTAAATTTATAAG+TGG + chr5.1:53586387-53586406 MS.gene43721:intron 15.0%
!!! ATTAGTTTTGTTGAAAATTA+GGG + chr5.1:53586601-53586620 MS.gene43721:intron 15.0%
!!! ATTTTCTGGAATTTTAAAAA+TGG - chr5.1:53588291-53588310 None:intergenic 15.0%
!!! ATTTTTAAAATTCCAGAAAA+TGG + chr5.1:53588290-53588309 MS.gene43721:CDS 15.0%
!!! CTCTTTTTTTATTTTATGTT+TGG + chr5.1:53587328-53587347 MS.gene43721:intron 15.0%
!!! GGAATTTTTTTGATTTTTAA+TGG + chr5.1:53586488-53586507 MS.gene43721:intron 15.0%
!!! TTTAATTGTTTCTTGAATTT+AGG + chr5.1:53586280-53586299 MS.gene43721:intron 15.0%
!!! TTTTTAAAATTCCAGAAAAT+GGG + chr5.1:53588291-53588310 MS.gene43721:CDS 15.0%
!!! TTTTTGTTCTTTTGATAATT+TGG + chr5.1:53586303-53586322 MS.gene43721:intron 15.0%
!! AACAATGAATTAATTCAGTA+TGG + chr5.1:53588170-53588189 MS.gene43721:CDS 20.0%
!! AATGACCAAACAAAAAAAAA+AGG - chr5.1:53588375-53588394 None:intergenic 20.0%
!! ATACTGAATTAATTCATTGT+TGG - chr5.1:53588171-53588190 None:intergenic 20.0%
!! ATGACCAAACAAAAAAAAAA+GGG - chr5.1:53588374-53588393 None:intergenic 20.0%
!! CCATTCAAATAAAACATTAA+AGG - chr5.1:53587962-53587981 None:intergenic 20.0%
!!! AGTATTGCTTGTTAATATTT+GGG + chr5.1:53589355-53589374 MS.gene43721:CDS 20.0%
!!! CATTAGTTTTGTTGAAAATT+AGG + chr5.1:53586600-53586619 MS.gene43721:intron 20.0%
!!! CCTTTAATGTTTTATTTGAA+TGG + chr5.1:53587959-53587978 MS.gene43721:intron 20.0%
!!! TAGTATTGCTTGTTAATATT+TGG + chr5.1:53589354-53589373 MS.gene43721:CDS 20.0%
!!! TTGATGATTTTATTGATGAT+GGG + chr5.1:53586535-53586554 MS.gene43721:intron 20.0%
!!! TTGTGAGAATTAATTTTGAA+TGG + chr5.1:53586905-53586924 MS.gene43721:intron 20.0%
!!! TTTGATGATTTTATTGATGA+TGG + chr5.1:53586534-53586553 MS.gene43721:intron 20.0%
! AAGATTTCATTTCTTGATGA+TGG + chr5.1:53586674-53586693 MS.gene43721:intron 25.0%
! ATCATTAGAAAGAATCATCT+GGG - chr5.1:53588673-53588692 None:intergenic 25.0%
! ATTAGTCAAGGACAAAATAA+AGG - chr5.1:53587495-53587514 None:intergenic 25.0%
! ATTCTTTCTAATGATAGCAT+GGG + chr5.1:53588678-53588697 MS.gene43721:CDS 25.0%
! TAAATGAATATGAGCAAATG+TGG + chr5.1:53588718-53588737 MS.gene43721:CDS 25.0%
! TACTTGATGTTAACTATTTC+AGG + chr5.1:53588028-53588047 MS.gene43721:intron 25.0%
! TAGGGAAAATTAATCTTGAA+TGG + chr5.1:53586619-53586638 MS.gene43721:intron 25.0%
! TATCATTAGAAAGAATCATC+TGG - chr5.1:53588674-53588693 None:intergenic 25.0%
! TCAGATTTAAATTATACCCA+TGG - chr5.1:53588561-53588580 None:intergenic 25.0%
! TGACCAAACAAAAAAAAAAG+GGG - chr5.1:53588373-53588392 None:intergenic 25.0%
! TTAAGAACATTAACAGGAAA+AGG - chr5.1:53588458-53588477 None:intergenic 25.0%
! TTAATTCAGTATGGTACAAA+CGG + chr5.1:53588179-53588198 MS.gene43721:CDS 25.0%
!! AGATTTCATTTCTTGATGAT+GGG + chr5.1:53586675-53586694 MS.gene43721:intron 25.0%
!! AGTTATGTTTTCTAATACCA+TGG + chr5.1:53588541-53588560 MS.gene43721:intron 25.0%
!! ATTAGCTTAAGAACATTAAC+AGG - chr5.1:53588464-53588483 None:intergenic 25.0%
!! GTATTGCTTGTTAATATTTG+GGG + chr5.1:53589356-53589375 MS.gene43721:CDS 25.0%
!! GTTATGTTTTCTAATACCAT+GGG + chr5.1:53588542-53588561 MS.gene43721:intron 25.0%
!! TGATTTTTAATGGTTAAACG+TGG + chr5.1:53586498-53586517 MS.gene43721:intron 25.0%
!!! ACACTAATTTTGGTGAAATT+TGG + chr5.1:53586727-53586746 MS.gene43721:intron 25.0%
!!! ACTAATTTTGGTGAAATTTG+GGG + chr5.1:53586729-53586748 MS.gene43721:intron 25.0%
!!! AGCTTTATTTACATTAGTCA+AGG - chr5.1:53587507-53587526 None:intergenic 25.0%
!!! CACTAATTTTGGTGAAATTT+GGG + chr5.1:53586728-53586747 MS.gene43721:intron 25.0%
!!! CTGGAATTTTAAAAATGGTT+GGG - chr5.1:53588286-53588305 None:intergenic 25.0%
!!! TCATGATTTTTGTTGATGAT+GGG + chr5.1:53586986-53587005 MS.gene43721:intron 25.0%
!!! TCTGGAATTTTAAAAATGGT+TGG - chr5.1:53588287-53588306 None:intergenic 25.0%
!!! TTCATGATTTTGATGATGAT+GGG + chr5.1:53586832-53586851 MS.gene43721:intron 25.0%
!!! TTCATGATTTTTGTTGATGA+TGG + chr5.1:53586985-53587004 MS.gene43721:intron 25.0%
!!! TTTCATGATTTTGATGATGA+TGG + chr5.1:53586831-53586850 MS.gene43721:intron 25.0%
ACTAACAAATTGCATTCTGA+TGG - chr5.1:53588409-53588428 None:intergenic 30.0%
AGTGACTTCAAATCAATAGA+AGG - chr5.1:53587986-53588005 None:intergenic 30.0%
ATATGAGCAAATGTGGAATT+CGG + chr5.1:53588725-53588744 MS.gene43721:CDS 30.0%
ATGTTTGTAAATTTGAGCCT+TGG + chr5.1:53586220-53586239 MS.gene43721:CDS 30.0%
GAAGTGCGTTGAAAAAATTA+TGG - chr5.1:53587447-53587466 None:intergenic 30.0%
GATTCTTTCTAATGATAGCA+TGG + chr5.1:53588677-53588696 MS.gene43721:CDS 30.0%
TAATTCAGTATGGTACAAAC+GGG + chr5.1:53588180-53588199 MS.gene43721:CDS 30.0%
TGTTTGTAAATTTGAGCCTT+GGG + chr5.1:53586221-53586240 MS.gene43721:CDS 30.0%
TTGTAGATTTATCGATCGTA+AGG + chr5.1:53587027-53587046 MS.gene43721:intron 30.0%
TTTCAACTCGTGTGTTAATT+GGG + chr5.1:53588220-53588239 MS.gene43721:CDS 30.0%
! AAGGACAAAATAAAGGTACA+CGG - chr5.1:53587488-53587507 None:intergenic 30.0%
! ATATGAACAATCGAGGATTT+TGG + chr5.1:53588932-53588951 MS.gene43721:CDS 30.0%
! ATGTTTCTAACTTCTCAACA+TGG + chr5.1:53587565-53587584 MS.gene43721:intron 30.0%
! GAATTTTGTTGCAGGTTTAA+CGG + chr5.1:53586567-53586586 MS.gene43721:intron 30.0%
! TATTTCTTCTGGAGAGTAAT+TGG - chr5.1:53587710-53587729 None:intergenic 30.0%
! TGGGGGAAATTAATTTTGTA+TGG + chr5.1:53586747-53586766 MS.gene43721:intron 30.0%
! TTTTCAACTCGTGTGTTAAT+TGG + chr5.1:53588219-53588238 MS.gene43721:CDS 30.0%
! TTTTGAATGGTTAGATCATG+CGG + chr5.1:53586918-53586937 MS.gene43721:intron 30.0%
! TTTTGTATGGTTAGATCATG+TGG + chr5.1:53586760-53586779 MS.gene43721:intron 30.0%
!! CTAATTTTGGTGAAATTTGG+GGG + chr5.1:53586730-53586749 MS.gene43721:intron 30.0%
!! GATTTCATTTCTTGATGATG+GGG + chr5.1:53586676-53586695 MS.gene43721:intron 30.0%
!! GTTCTTTTGATAATTTGGAC+TGG + chr5.1:53586308-53586327 MS.gene43721:intron 30.0%
!! TTTATTGATGATGGGTTTGT+GGG + chr5.1:53586543-53586562 MS.gene43721:intron 30.0%
!!! AATTTGGACTGGTTTTGATT+TGG + chr5.1:53586319-53586338 MS.gene43721:intron 30.0%
!!! AGCTTGTTGATTTTTATCTG+AGG + chr5.1:53586148-53586167 MS.gene43721:CDS 30.0%
!!! CATGATTTTTGTTGATGATG+GGG + chr5.1:53586987-53587006 MS.gene43721:intron 30.0%
!!! GTGGTTTTGAACACTAATTT+TGG + chr5.1:53586717-53586736 MS.gene43721:intron 30.0%
!!! TCATGATTTTGATGATGATG+GGG + chr5.1:53586833-53586852 MS.gene43721:intron 30.0%
!!! TGACCCCTTTTTTTTTTGTT+TGG + chr5.1:53588367-53588386 MS.gene43721:intron 30.0%
!!! TTTTATTGATGATGGGTTTG+TGG + chr5.1:53586542-53586561 MS.gene43721:intron 30.0%
AAGATAAAGGAACCAGACTT+AGG - chr5.1:53587741-53587760 None:intergenic 35.0%
AATACCCATTAGTTGTTGCA+CGG - chr5.1:53587121-53587140 None:intergenic 35.0%
ACAACTGCAGAATCTAACTT+GGG + chr5.1:53589224-53589243 MS.gene43721:CDS 35.0%
AGGATGAAGATCAATGGAAA+CGG + chr5.1:53586168-53586187 MS.gene43721:CDS 35.0%
AGTCTTCTTCATTCCAATCA+AGG - chr5.1:53587186-53587205 None:intergenic 35.0%
ATATGTCCAAGTTTAACAGC+TGG - chr5.1:53588058-53588077 None:intergenic 35.0%
ATTAGGATAAGGTCTAGACA+AGG + chr5.1:53588774-53588793 MS.gene43721:CDS 35.0%
CATCAGAATATGAACAATCG+AGG + chr5.1:53588925-53588944 MS.gene43721:CDS 35.0%
CTCATATTCATTTACCACAG+TGG - chr5.1:53588712-53588731 None:intergenic 35.0%
GAGAATAACTTATCATCCCA+TGG - chr5.1:53588107-53588126 None:intergenic 35.0%
GCTGTTACTAACCATCATAT+TGG - chr5.1:53588345-53588364 None:intergenic 35.0%
TACAAAAGATGAGAGTTTGC+AGG + chr5.1:53589103-53589122 MS.gene43721:CDS 35.0%
TACAACTGCAGAATCTAACT+TGG + chr5.1:53589223-53589242 MS.gene43721:CDS 35.0%
TATCTGAGGATGAAGATCAA+TGG + chr5.1:53586162-53586181 MS.gene43721:CDS 35.0%
TGCATATTCTGCCATTGTAA+TGG + chr5.1:53589325-53589344 MS.gene43721:CDS 35.0%
TTTATCGATCGTAAGGAACA+AGG + chr5.1:53587034-53587053 MS.gene43721:CDS 35.0%
! AACCCTACATCACTATTTTG+CGG - chr5.1:53588636-53588655 None:intergenic 35.0%
! ACATCAGAGTTTAGAAGTAC+CGG + chr5.1:53587885-53587904 MS.gene43721:CDS 35.0%
! GTTAAGGTGTCAATTAGAGA+AGG - chr5.1:53588489-53588508 None:intergenic 35.0%
! GTTAGTTTCAGAACACATAG+CGG + chr5.1:53588423-53588442 MS.gene43721:intron 35.0%
! TGACTTTGAGTTAATGATGC+TGG + chr5.1:53587381-53587400 MS.gene43721:intron 35.0%
! TTTTCTTCTGTCCAATGGAT+CGG + chr5.1:53587069-53587088 MS.gene43721:CDS 35.0%
!! AACAACTAATGGGTATTGGA+AGG + chr5.1:53587124-53587143 MS.gene43721:CDS 35.0%
AAAATCAACAAGCTCCTCGT+CGG - chr5.1:53586142-53586161 None:intergenic 40.0%
AAAGATCGAAGGATCAAGTC+TGG + chr5.1:53587155-53587174 MS.gene43721:CDS 40.0%
AACAAGCGACAAAGGACATA+TGG - chr5.1:53587613-53587632 None:intergenic 40.0%
AAGTTCAAACTGTGGTGAAG+CGG + chr5.1:53587657-53587676 MS.gene43721:CDS 40.0%
AATACAGTCTGACCTAAGTC+TGG + chr5.1:53587726-53587745 MS.gene43721:CDS 40.0%
AATTCGGATACTGTTGTCGA+TGG + chr5.1:53588741-53588760 MS.gene43721:CDS 40.0%
ACAAGCGACAAAGGACATAT+GGG - chr5.1:53587612-53587631 None:intergenic 40.0%
ACACTGGTATAAGGATAAGG+AGG + chr5.1:53588961-53588980 MS.gene43721:CDS 40.0%
ACTCCGCAAAATAGTGATGT+AGG + chr5.1:53588630-53588649 MS.gene43721:CDS 40.0%
AGCATCACATGATTATCCAG+AGG + chr5.1:53588602-53588621 MS.gene43721:CDS 40.0%
AGGTCAGACTGTATTTCTTC+TGG - chr5.1:53587721-53587740 None:intergenic 40.0%
AGTCTTGCAAGTTCAAACTG+TGG + chr5.1:53587649-53587668 MS.gene43721:CDS 40.0%
ATGGAAACGGTGATGAAGTT+TGG + chr5.1:53586181-53586200 MS.gene43721:CDS 40.0%
ATGGTTAGATCATGCGGTTA+TGG + chr5.1:53586924-53586943 MS.gene43721:intron 40.0%
ATGGTTAGATCATGTGGTTG+TGG + chr5.1:53586766-53586785 MS.gene43721:intron 40.0%
CAACTGCAGAATCTAACTTG+GGG + chr5.1:53589225-53589244 MS.gene43721:CDS 40.0%
CATTTACCACAGTGGTCATT+TGG - chr5.1:53588704-53588723 None:intergenic 40.0%
CCTACCTTAAAAGAGCTTGA+TGG + chr5.1:53587272-53587291 MS.gene43721:CDS 40.0%
CTCCGCAAAATAGTGATGTA+GGG + chr5.1:53588631-53588650 MS.gene43721:CDS 40.0%
GAAAAACTTTCTGTTGGGCA+GGG + chr5.1:53589250-53589269 MS.gene43721:CDS 40.0%
GCATCACATGATTATCCAGA+GGG + chr5.1:53588603-53588622 MS.gene43721:CDS 40.0%
GCTTCTTAAACAAGCGACAA+AGG - chr5.1:53587621-53587640 None:intergenic 40.0%
GGATGATAAGTTATTCTCCC+CGG + chr5.1:53588109-53588128 MS.gene43721:CDS 40.0%
GGGTCGAAAAACTTTCTGTT+GGG + chr5.1:53589245-53589264 MS.gene43721:CDS 40.0%
GTGACACTGGTATAAGGATA+AGG + chr5.1:53588958-53588977 MS.gene43721:CDS 40.0%
TACCTTGTGCTTGAATCACT+GGG - chr5.1:53589022-53589041 None:intergenic 40.0%
TACTAGCGAGACCATTACAA+TGG - chr5.1:53589339-53589358 None:intergenic 40.0%
TGAACCGTGCAACAACTAAT+GGG + chr5.1:53587114-53587133 MS.gene43721:CDS 40.0%
TGAATCACTGGGTTCATGTT+TGG - chr5.1:53589011-53589030 None:intergenic 40.0%
TGGAAACGGTGATGAAGTTT+GGG + chr5.1:53586182-53586201 MS.gene43721:CDS 40.0%
TGTGGAAATGGCCAATATGA+TGG + chr5.1:53588331-53588350 MS.gene43721:CDS 40.0%
TTGAACCGTGCAACAACTAA+TGG + chr5.1:53587113-53587132 MS.gene43721:CDS 40.0%
! AATAAAGGTACACGGAGTTG+TGG - chr5.1:53587480-53587499 None:intergenic 40.0%
! CTCATCTTTTGTAGTCTCCT+CGG - chr5.1:53589096-53589115 None:intergenic 40.0%
! GTGCAACAACTAATGGGTAT+TGG + chr5.1:53587120-53587139 MS.gene43721:CDS 40.0%
! GTGGTTTTTCTTCTGTCCAA+TGG + chr5.1:53587064-53587083 MS.gene43721:CDS 40.0%
! TTGTGGGTGAATTTTGTTGC+AGG + chr5.1:53586559-53586578 MS.gene43721:intron 40.0%
! TTTTGTTGCAGGTTTAACGG+TGG + chr5.1:53586570-53586589 MS.gene43721:intron 40.0%
!! GGGGTTTGTTGTAGGTTTAT+CGG + chr5.1:53586695-53586714 MS.gene43721:intron 40.0%
!! GTTTGTTGTAGGTTTATCGG+TGG + chr5.1:53586698-53586717 MS.gene43721:intron 40.0%
!! TTGATGATGGGGTTTGTTGT+AGG + chr5.1:53586687-53586706 MS.gene43721:intron 40.0%
!! TTTGATGATGATGGGGTTTG+TGG + chr5.1:53586840-53586859 MS.gene43721:intron 40.0%
!!! AAGACTCTTGTTTTCTACGC+TGG + chr5.1:53587200-53587219 MS.gene43721:CDS 40.0%
!!! CCATCAAGCTCTTTTAAGGT+AGG - chr5.1:53587275-53587294 None:intergenic 40.0%
AACCCAGTGATTCAAGCACA+AGG + chr5.1:53589017-53589036 MS.gene43721:CDS 45.0%
AATCAGGTGGGGTTATAACG+TGG - chr5.1:53587831-53587850 None:intergenic 45.0%
ACAGATCTCTCTTGCTGACA+TGG - chr5.1:53589192-53589211 None:intergenic 45.0%
ACGATTTGAGCTTGAGCCAT+GGG + chr5.1:53588088-53588107 MS.gene43721:CDS 45.0%
AGATGAGAGTTTGCAGGAGA+CGG + chr5.1:53589109-53589128 MS.gene43721:CDS 45.0%
ATCAGGTGGGGTTATAACGT+GGG - chr5.1:53587830-53587849 None:intergenic 45.0%
ATCGCTATAGCAATCAGGTG+GGG - chr5.1:53587842-53587861 None:intergenic 45.0%
ATGGCTCAAGCTCAAATCGT+GGG - chr5.1:53588088-53588107 None:intergenic 45.0%
ATTGCTTCCTCAGAGTTCTC+AGG - chr5.1:53587805-53587824 None:intergenic 45.0%
CACTAGCGACAGAAGATGAA+AGG + chr5.1:53587764-53587783 MS.gene43721:CDS 45.0%
CAGATCTCTCTTGCTGACAT+GGG - chr5.1:53589191-53589210 None:intergenic 45.0%
CATCGCTATAGCAATCAGGT+GGG - chr5.1:53587843-53587862 None:intergenic 45.0%
CATGCATCGCTATAGCAATC+AGG - chr5.1:53587847-53587866 None:intergenic 45.0%
CCTCCTAATCGTATTCTACG+CGG - chr5.1:53589050-53589069 None:intergenic 45.0%
CGAAAAACTTTCTGTTGGGC+AGG + chr5.1:53589249-53589268 MS.gene43721:CDS 45.0%
CTACCTTGTGCTTGAATCAC+TGG - chr5.1:53589023-53589042 None:intergenic 45.0%
CTCCTAATCGTATTCTACGC+GGG - chr5.1:53589049-53589068 None:intergenic 45.0%
GACAAAGGACATATGGGTTC+TGG - chr5.1:53587606-53587625 None:intergenic 45.0%
GCACACTTTCCACCAGAATT+TGG + chr5.1:53588137-53588156 MS.gene43721:CDS 45.0%
GCACCAAGGAGAATACGATT+GGG + chr5.1:53588846-53588865 MS.gene43721:CDS 45.0%
GGAAGACCAGCTGTTAAACT+TGG + chr5.1:53588049-53588068 MS.gene43721:intron 45.0%
GGACAGAAGAAAAACCACTC+TGG - chr5.1:53587062-53587081 None:intergenic 45.0%
GGGAGATGTCTTCTCTGAAT+CGG - chr5.1:53589171-53589190 None:intergenic 45.0%
GGGGTCGAAAAACTTTCTGT+TGG + chr5.1:53589244-53589263 MS.gene43721:CDS 45.0%
GTCGCTAGTGAGGAAGATAA+AGG - chr5.1:53587754-53587773 None:intergenic 45.0%
TAAGGAACAAGGATCCAGAG+TGG + chr5.1:53587045-53587064 MS.gene43721:CDS 45.0%
TCCACCAGAATTTGGCTATC+AGG + chr5.1:53588145-53588164 MS.gene43721:CDS 45.0%
TCCTAATCGTATTCTACGCG+GGG - chr5.1:53589048-53589067 None:intergenic 45.0%
TGCACCAAGGAGAATACGAT+TGG + chr5.1:53588845-53588864 MS.gene43721:CDS 45.0%
TGGACAGTGACACTGGTATA+AGG + chr5.1:53588952-53588971 MS.gene43721:CDS 45.0%
TGTAGTCTCCTCGGAAACAA+GGG - chr5.1:53589087-53589106 None:intergenic 45.0%
TTCATCTTCTGTCGCTAGTG+AGG - chr5.1:53587764-53587783 None:intergenic 45.0%
TTCGGATACTTCCGATCCAT+TGG - chr5.1:53587083-53587102 None:intergenic 45.0%
TTCTTACCAGGCAAATCCCA+AGG - chr5.1:53586240-53586259 None:intergenic 45.0%
TTGCTTCCTCAGAGTTCTCA+GGG - chr5.1:53587804-53587823 None:intergenic 45.0%
TTGGCCTGATAGCCAAATTC+TGG - chr5.1:53588152-53588171 None:intergenic 45.0%
TTGTAGTCTCCTCGGAAACA+AGG - chr5.1:53589088-53589107 None:intergenic 45.0%
! AGGATTTTGGACAGTGACAC+TGG + chr5.1:53588945-53588964 MS.gene43721:CDS 45.0%
! ATTCTGGTGGAAAGTGTGCA+TGG - chr5.1:53588136-53588155 None:intergenic 45.0%
! TTCTGGTGGAAAGTGTGCAT+GGG - chr5.1:53588135-53588154 None:intergenic 45.0%
!! AAGTCTGGTGCTACCTTGAT+TGG + chr5.1:53587170-53587189 MS.gene43721:CDS 45.0%
!! ATGGATCGGAAGTATCCGAA+TGG + chr5.1:53587083-53587102 MS.gene43721:CDS 45.0%
!! GGTGCCATCAAGCTCTTTTA+AGG - chr5.1:53587279-53587298 None:intergenic 45.0%
!! TGGATCGGAAGTATCCGAAT+GGG + chr5.1:53587084-53587103 MS.gene43721:CDS 45.0%
!!! CTCTTGTTTTCTACGCTGGT+CGG + chr5.1:53587204-53587223 MS.gene43721:CDS 45.0%
!!! TCTTGTTTTCTACGCTGGTC+GGG + chr5.1:53587205-53587224 MS.gene43721:CDS 45.0%
AAGACTGATAGACGCCTCAC+TGG - chr5.1:53588255-53588274 None:intergenic 50.0%
ACTTTCTGTTGGGCAGGGTT+CGG + chr5.1:53589255-53589274 MS.gene43721:CDS 50.0%
AGATGAGAGTAGACCTGTCC+AGG - chr5.1:53587305-53587324 None:intergenic 50.0%
AGCTATCCCTGAGAACTCTG+AGG + chr5.1:53587795-53587814 MS.gene43721:CDS 50.0%
AGGCGACAGGAAAAGATCGA+AGG + chr5.1:53587144-53587163 MS.gene43721:CDS 50.0%
AGTAGACCGCATAGCGCTAA+TGG - chr5.1:53589300-53589319 None:intergenic 50.0%
AGTTCTCAGGGATAGCTGCT+AGG - chr5.1:53587792-53587811 None:intergenic 50.0%
CACGATTTGAGCTTGAGCCA+TGG + chr5.1:53588087-53588106 MS.gene43721:CDS 50.0%
CACTGAACAAGCTGCCGTTA+GGG + chr5.1:53586100-53586119 MS.gene43721:CDS 50.0%
CATCCTCCATTAGCGCTATG+CGG + chr5.1:53589291-53589310 MS.gene43721:CDS 50.0%
CATGGCTCAAGCTCAAATCG+TGG - chr5.1:53588089-53588108 None:intergenic 50.0%
CCAAGGAGAATACGATTGGG+AGG + chr5.1:53588849-53588868 MS.gene43721:CDS 50.0%
CCGCGTAGAATACGATTAGG+AGG + chr5.1:53589047-53589066 MS.gene43721:CDS 50.0%
CCTCCCAATCGTATTCTCCT+TGG - chr5.1:53588852-53588871 None:intergenic 50.0%
CGACGGTGAACACTCAACTA+CGG - chr5.1:53586049-53586068 None:intergenic 50.0%
CGGTTCAATCTGCTCCCATT+CGG - chr5.1:53587101-53587120 None:intergenic 50.0%
CGTCGTCTCCTCAGAAACAA+GGG - chr5.1:53588889-53588908 None:intergenic 50.0%
CTTCCTTGTGCTTGCATCAC+CGG - chr5.1:53588825-53588844 None:intergenic 50.0%
GATGAGAGTAGACCTGTCCA+GGG - chr5.1:53587304-53587323 None:intergenic 50.0%
GCATCGCTATAGCAATCAGG+TGG - chr5.1:53587844-53587863 None:intergenic 50.0%
GCCTGATAGCCAAATTCTGG+TGG - chr5.1:53588149-53588168 None:intergenic 50.0%
GGAGAGTAATTGGCAGTCGT+AGG - chr5.1:53587700-53587719 None:intergenic 50.0%
TCACTGAACAAGCTGCCGTT+AGG + chr5.1:53586099-53586118 MS.gene43721:CDS 50.0%
TCGGATACTGTTGTCGATGG+CGG + chr5.1:53588744-53588763 MS.gene43721:CDS 50.0%
TGAACAACCAGCCATGAACC+CGG + chr5.1:53588803-53588822 MS.gene43721:CDS 50.0%
TTCCTTGTGCTTGCATCACC+GGG - chr5.1:53588824-53588843 None:intergenic 50.0%
TTTGAGCCTTGGGATTTGCC+TGG + chr5.1:53586231-53586250 MS.gene43721:CDS 50.0%
! AAGCACAAGGAAGTGCACCA+AGG + chr5.1:53588832-53588851 MS.gene43721:CDS 50.0%
! CAAGCATTCCCTTGTTTCCG+AGG + chr5.1:53589076-53589095 MS.gene43721:CDS 50.0%
! GCGGCACTGGAATTAGGATA+AGG + chr5.1:53588763-53588782 MS.gene43721:CDS 50.0%
!! AATGGGTATTGGAAGGCGAC+AGG + chr5.1:53587131-53587150 MS.gene43721:CDS 50.0%
!! CCTTGTTTCTGAGGAGACGA+CGG + chr5.1:53588887-53588906 MS.gene43721:CDS 50.0%
!! TTTAGAAGTACCGGCTGCAG+AGG + chr5.1:53587894-53587913 MS.gene43721:CDS 50.0%
AAATGGGTCGTGCAGCGACT+CGG + chr5.1:53588307-53588326 MS.gene43721:CDS 55.0%
AACCCGGTGATGCAAGCACA+AGG + chr5.1:53588819-53588838 MS.gene43721:CDS 55.0%
ACCGGCTGCAGAGGTAAGAT+GGG + chr5.1:53587903-53587922 MS.gene43721:intron 55.0%
AGACCGCATAGCGCTAATGG+AGG - chr5.1:53589297-53589316 None:intergenic 55.0%
AGAGTAGACCTGTCCAGGGT+TGG - chr5.1:53587300-53587319 None:intergenic 55.0%
CAATGAGTCCTCGTCCCCTT+CGG - chr5.1:53587233-53587252 None:intergenic 55.0%
CATGGGCCAAATGACCACTG+TGG + chr5.1:53588695-53588714 MS.gene43721:CDS 55.0%
CCGTCGTCTCCTCAGAAACA+AGG - chr5.1:53588890-53588909 None:intergenic 55.0%
CTGAGGAGACGACGGAAGAT+GGG + chr5.1:53588895-53588914 MS.gene43721:CDS 55.0%
GAAGGGGACGAGGACTCATT+GGG + chr5.1:53587232-53587251 MS.gene43721:CDS 55.0%
GCCCCGCGTAGAATACGATT+AGG + chr5.1:53589044-53589063 MS.gene43721:CDS 55.0%
TCAACAAGCTCCTCGTCGGT+AGG - chr5.1:53586138-53586157 None:intergenic 55.0%
TCTGAGGAGACGACGGAAGA+TGG + chr5.1:53588894-53588913 MS.gene43721:CDS 55.0%
TGCTTGCATCACCGGGTTCA+TGG - chr5.1:53588817-53588836 None:intergenic 55.0%
TTCACCGTCGTCGCAACAAG+CGG + chr5.1:53586059-53586078 MS.gene43721:CDS 55.0%
TTGGGACGAGTTCTCCAGTG+AGG + chr5.1:53588238-53588257 MS.gene43721:CDS 55.0%
! CAGCGACTCGGATGTGGAAA+TGG + chr5.1:53588319-53588338 MS.gene43721:CDS 55.0%
! TACCGGCTGCAGAGGTAAGA+TGG + chr5.1:53587902-53587921 MS.gene43721:intron 55.0%
! TCGATGGCGGCACTGGAATT+AGG + chr5.1:53588757-53588776 MS.gene43721:CDS 55.0%
! TCGCTGCACGACCCATTTTC+TGG - chr5.1:53588305-53588324 None:intergenic 55.0%
! TTTTGCGGAGTCACTCCCTC+TGG - chr5.1:53588621-53588640 None:intergenic 55.0%
!! TGCGCGTTCCCTTGTTTCTG+AGG + chr5.1:53588878-53588897 MS.gene43721:CDS 55.0%
CAGCACTCTCAGCAGCAGCA+TGG - chr5.1:53589148-53589167 None:intergenic 60.0%
CGAAGGGGACGAGGACTCAT+TGG + chr5.1:53587231-53587250 MS.gene43721:CDS 60.0%
GCCCATCTTACCTCTGCAGC+CGG - chr5.1:53587907-53587926 None:intergenic 60.0%
TGATGGCACCAACCCTGGAC+AGG + chr5.1:53587289-53587308 MS.gene43721:CDS 60.0%
TGCATCACCGGGTTCATGGC+TGG - chr5.1:53588813-53588832 None:intergenic 60.0%
TGCCGTTAGGGTTCCGCTTC+CGG + chr5.1:53586112-53586131 MS.gene43721:CDS 60.0%
! ACTGTTGTCGATGGCGGCAC+TGG + chr5.1:53588750-53588769 MS.gene43721:CDS 60.0%
! GAGCTTGATGGCACCAACCC+TGG + chr5.1:53587284-53587303 MS.gene43721:CDS 60.0%
! GGTGGAAAGTGTGCATGGGC+CGG - chr5.1:53588131-53588150 None:intergenic 60.0%
! GTGGAAAGTGTGCATGGGCC+GGG - chr5.1:53588130-53588149 None:intergenic 60.0%
! TCCTCCGCTTGTTGCGACGA+CGG - chr5.1:53586066-53586085 None:intergenic 60.0%
! TGGAAAGTGTGCATGGGCCG+GGG - chr5.1:53588129-53588148 None:intergenic 60.0%
ACCGTCGTCGCAACAAGCGG+AGG + chr5.1:53586062-53586081 MS.gene43721:CDS 65.0%
CAAGCTCCTCGTCGGTAGGC+CGG - chr5.1:53586134-53586153 None:intergenic 65.0%
GCAACAAGCGGAGGAGCTGG+CGG + chr5.1:53586071-53586090 MS.gene43721:CDS 65.0%
GGCCGGAAGCGGAACCCTAA+CGG - chr5.1:53586117-53586136 None:intergenic 65.0%
GTCGCAACAAGCGGAGGAGC+TGG + chr5.1:53586068-53586087 MS.gene43721:CDS 65.0%
TACGCTGGTCGGGCTCCGAA+GGG + chr5.1:53587215-53587234 MS.gene43721:CDS 65.0%
! GTCGTGCAGCGACTCGGATG+TGG + chr5.1:53588313-53588332 MS.gene43721:CDS 65.0%
ACGCTGGTCGGGCTCCGAAG+GGG + chr5.1:53587216-53587235 MS.gene43721:CDS 70.0%
CCTCGTCGGTAGGCCGGAAG+CGG - chr5.1:53586128-53586147 None:intergenic 70.0%
CTACGCTGGTCGGGCTCCGA+AGG + chr5.1:53587214-53587233 MS.gene43721:CDS 70.0%
CCGCTTCCGGCCTACCGACG+AGG + chr5.1:53586125-53586144 MS.gene43721:CDS 75.0%
GTCGGGCTCCGAAGGGGACG+AGG + chr5.1:53587222-53587241 MS.gene43721:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 53586039 53589406 53586039 ID=MS.gene43721
chr5.1 mRNA 53586039 53589406 53586039 ID=MS.gene43721.t1;Parent=MS.gene43721
chr5.1 exon 53586039 53586252 53586039 ID=MS.gene43721.t1.exon1;Parent=MS.gene43721.t1
chr5.1 CDS 53586039 53586252 53586039 ID=cds.MS.gene43721.t1;Parent=MS.gene43721.t1
chr5.1 exon 53587033 53587310 53587033 ID=MS.gene43721.t1.exon2;Parent=MS.gene43721.t1
chr5.1 CDS 53587033 53587310 53587033 ID=cds.MS.gene43721.t1;Parent=MS.gene43721.t1
chr5.1 exon 53587607 53587915 53587607 ID=MS.gene43721.t1.exon3;Parent=MS.gene43721.t1
chr5.1 CDS 53587607 53587915 53587607 ID=cds.MS.gene43721.t1;Parent=MS.gene43721.t1
chr5.1 exon 53588050 53588352 53588050 ID=MS.gene43721.t1.exon4;Parent=MS.gene43721.t1
chr5.1 CDS 53588050 53588352 53588050 ID=cds.MS.gene43721.t1;Parent=MS.gene43721.t1
chr5.1 exon 53588594 53589406 53588594 ID=MS.gene43721.t1.exon5;Parent=MS.gene43721.t1
chr5.1 CDS 53588594 53589406 53588594 ID=cds.MS.gene43721.t1;Parent=MS.gene43721.t1
Gene Sequence

>MS.gene43721

ATGGGTGCCGTAGTTGAGTGTTCACCGTCGTCGCAACAAGCGGAGGAGCTGGCGGTTCTCTCACTGAACAAGCTGCCGTTAGGGTTCCGCTTCCGGCCTACCGACGAGGAGCTTGTTGATTTTTATCTGAGGATGAAGATCAATGGAAACGGTGATGAAGTTTGGGTTATTCGTGAAGTTGATGTTTGTAAATTTGAGCCTTGGGATTTGCCTGGTAAGAATTTTTTTTTATTTTTTTATCTTTAATTGTTTCTTGAATTTAGGTTTTTGTTCTTTTGATAATTTGGACTGGTTTTGATTTGGATAAGTGATTGTTGTTGACTACATTTTGATTGTGATCGTTTGTGTTTGATATGTAAATTTATAAGTGGCTGTTATTTGATTTTGTTTTGTTTTACTGTTTCTGTGTAATTTAGCTTGTTGAATGAGTTTTTTTTTTTTTTTTCTATGGAATTTTTTTGATTTTTAATGGTTAAACGTGGTTATGATATTTGATTTGATGATTTTATTGATGATGGGTTTGTGGGTGAATTTTGTTGCAGGTTTAACGGTGGTAATGAACATTAGTTTTGTTGAAAATTAGGGAAAATTAATCTTGAATGGTTACGATATGATGATTTTGTTTTTGTCGATCGAAGATTTCATTTCTTGATGATGGGGTTTGTTGTAGGTTTATCGGTGGTTTTGAACACTAATTTTGGTGAAATTTGGGGGAAATTAATTTTGTATGGTTAGATCATGTGGTTGTGGTATTTGATATGATGATTTTGTTATGTTATTGTTGACTGAAAATTTCATGATTTTGATGATGATGGGGTTTGTGGTGTTTTTGTTGTAGATTTATCAAAGCTACTGAACAATAATTTTTGTGAGAATTAATTTTGAATGGTTAGATCATGCGGTTATGGCATTTGATATGATGATTTTGTTTTTGTTAAGTAAAAATTTCATGATTTTTGTTGATGATGGGGTTTATGTTTTTTTCTTTTTGTAGATTTATCGATCGTAAGGAACAAGGATCCAGAGTGGTTTTTCTTCTGTCCAATGGATCGGAAGTATCCGAATGGGAGCAGATTGAACCGTGCAACAACTAATGGGTATTGGAAGGCGACAGGAAAAGATCGAAGGATCAAGTCTGGTGCTACCTTGATTGGAATGAAGAAGACTCTTGTTTTCTACGCTGGTCGGGCTCCGAAGGGGACGAGGACTCATTGGGTTATGCATGAATATAGACCTACCTTAAAAGAGCTTGATGGCACCAACCCTGGACAGGTCTACTCTCATCTCCTCTCTTTTTTTATTTTATGTTTGGTTTTAATGACTGATTTGAAGTATTTGTTGCTGACTTTGAGTTAATGATGCTGGTTGTTGTAACTTGATTCTAATTCTATATGTTCATTGTGTTCCATAATTTTTTCAACGCACTTCATTGCATCTACCACAACTCCGTGTACCTTTATTTTGTCCTTGACTAATGTAAATAAAGCTACTGTGATTTATGACTGCCTAAGCAATTATAGATAATTATGTTTCTAACTTCTCAACATGGTTGATTTGACTTATGCCAGAACCCATATGTCCTTTGTCGCTTGTTTAAGAAGCAAGATGAGAGTCTTGCAAGTTCAAACTGTGGTGAAGCGGAGCAGACTACTTCAACTCCTACGACTGCCAATTACTCTCCAGAAGAAATACAGTCTGACCTAAGTCTGGTTCCTTTATCTTCCTCACTAGCGACAGAAGATGAAAGGCACCTAGCAGCTATCCCTGAGAACTCTGAGGAAGCAATGTCCCACGTTATAACCCCACCTGATTGCTATAGCGATGCATGTAATGCTTCTGATGCACAACATCAGAGTTTAGAAGTACCGGCTGCAGAGGTAAGATGGGCTAACTGTAACTGAGTTTAATCTTTTATTTGTTCCTTTAATGTTTTATTTGAATGGTCCTTCTATTGATTTGAAGTCACTGAATTTGTTGATTTCGTAACTATACTTGATGTTAACTATTTCAGGAAGACCAGCTGTTAAACTTGGACATATTTGATAGCCCACGATTTGAGCTTGAGCCATGGGATGATAAGTTATTCTCCCCGGCCCATGCACACTTTCCACCAGAATTTGGCTATCAGGCCAACAATGAATTAATTCAGTATGGTACAAACGGGACAGATGTTTCAGACTTTTTCAACTCGTGTGTTAATTGGGACGAGTTCTCCAGTGAGGCGTCTATCAGTCTTGATCTGAGCCCAACCATTTTTAAAATTCCAGAAAATGGGTCGTGCAGCGACTCGGATGTGGAAATGGCCAATATGATGGTTAGTAACAGCTCTGACCCCTTTTTTTTTTGTTTGGTCATTCTAGATTTCTGCCATCAGAATGCAATTTGTTAGTTTCAGAACACATAGCGGCAGTTCTAACCTTTTCCTGTTAATGTTCTTAAGCTAATTGCCTTCTCTAATTGACACCTTAACACAAATTTTATTGTATATATGTCGGCATATTTAGTTATGTTTTCTAATACCATGGGTATAATTTAAATCTGATTGTATGCTGCAGAATCTGCTAGCATCACATGATTATCCAGAGGGAGTGACTCCGCAAAATAGTGATGTAGGGTTGTTTCAGAACAATTCCCAGATGATTCTTTCTAATGATAGCATGGGCCAAATGACCACTGTGGTAAATGAATATGAGCAAATGTGGAATTCGGATACTGTTGTCGATGGCGGCACTGGAATTAGGATAAGGTCTAGACAAGGACAAAGTGAACAACCAGCCATGAACCCGGTGATGCAAGCACAAGGAAGTGCACCAAGGAGAATACGATTGGGAGGATTTGTTGCGCGTTCCCTTGTTTCTGAGGAGACGACGGAAGATGGGAGTTGTGCATCAGAATATGAACAATCGAGGATTTTGGACAGTGACACTGGTATAAGGATAAGGAGGACTCGACAAAGAAGAAATGAAGAGCCAAACATGAACCCAGTGATTCAAGCACAAGGTAGTGCCCCGCGTAGAATACGATTAGGAGGATTTGTCAAGCATTCCCTTGTTTCCGAGGAGACTACAAAAGATGAGAGTTTGCAGGAGACGGAAGCTTCAGAAAACCATGCTGCTGCTGAGAGTGCTGCCGATTCAGAGAAGACATCTCCCATGTCAGCAAGAGAGATCTGTGAGCAACATGTTACAACTGCAGAATCTAACTTGGGGTCGAAAAACTTTCTGTTGGGCAGGGTTCGGTGCACTTCAAAGACATCCTCCATTAGCGCTATGCGGTCTACTGTTCTTGCATATTCTGCCATTGTAATGGTCTCGCTAGTATTGCTTGTTAATATTTGGGGATATCTTAGATTTAGAAATGCTTACTAG
Protein sequence

>MS.gene43721.t1

MGAVVECSPSSQQAEELAVLSLNKLPLGFRFRPTDEELVDFYLRMKINGNGDEVWVIREVDVCKFEPWDLPDLSIVRNKDPEWFFFCPMDRKYPNGSRLNRATTNGYWKATGKDRRIKSGATLIGMKKTLVFYAGRAPKGTRTHWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKQDESLASSNCGEAEQTTSTPTTANYSPEEIQSDLSLVPLSSSLATEDERHLAAIPENSEEAMSHVITPPDCYSDACNASDAQHQSLEVPAAEEDQLLNLDIFDSPRFELEPWDDKLFSPAHAHFPPEFGYQANNELIQYGTNGTDVSDFFNSCVNWDEFSSEASISLDLSPTIFKIPENGSCSDSDVEMANMMNLLASHDYPEGVTPQNSDVGLFQNNSQMILSNDSMGQMTTVVNEYEQMWNSDTVVDGGTGIRIRSRQGQSEQPAMNPVMQAQGSAPRRIRLGGFVARSLVSEETTEDGSCASEYEQSRILDSDTGIRIRRTRQRRNEEPNMNPVIQAQGSAPRRIRLGGFVKHSLVSEETTKDESLQETEASENHAAAESAADSEKTSPMSAREICEQHVTTAESNLGSKNFLLGRVRCTSKTSSISAMRSTVLAYSAIVMVSLVLLVNIWGYLRFRNAY