AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43785

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43785.t1 MTR_5g070020 94.578 332 16 2 1 330 1 332 0.0 642
MS.gene43785.t1 MTR_3g463400 50.541 370 121 14 11 335 5 357 1.95e-105 316
MS.gene43785.t1 MTR_4g105660 60.563 142 49 1 109 250 168 302 5.39e-57 191
MS.gene43785.t1 MTR_3g077650 64.394 132 40 1 119 250 179 303 1.52e-55 187
MS.gene43785.t1 MTR_4g088015 57.237 152 55 2 119 262 219 368 3.99e-54 184
MS.gene43785.t1 MTR_5g049190 62.121 132 40 1 119 250 17 138 3.52e-52 172
MS.gene43785.t1 MTR_7g037260 51.497 167 75 4 119 284 143 304 3.68e-52 176
MS.gene43785.t1 MTR_7g451170 62.698 126 45 1 120 245 190 313 1.04e-51 176
MS.gene43785.t1 MTR_7g037130 57.480 127 52 1 119 245 143 267 2.76e-46 161
MS.gene43785.t1 MTR_7g035350 51.538 130 55 2 120 248 224 346 4.14e-43 154
MS.gene43785.t1 MTR_1g057980 46.875 160 76 3 121 279 80 231 3.39e-42 148
MS.gene43785.t1 MTR_7g450950 52.308 130 57 1 120 249 156 280 1.14e-41 148
MS.gene43785.t1 MTR_7g061330 62.136 103 39 0 119 221 111 213 2.20e-40 149
MS.gene43785.t1 MTR_7g461410 62.136 103 39 0 119 221 111 213 2.20e-40 149
MS.gene43785.t1 MTR_7g061330 62.136 103 39 0 119 221 75 177 3.30e-40 148
MS.gene43785.t1 MTR_3g110028 57.282 103 44 0 119 221 83 185 4.98e-38 144
MS.gene43785.t1 MTR_1g026870 56.311 103 45 0 119 221 83 185 3.87e-37 142
MS.gene43785.t1 MTR_4g019370 53.922 102 47 0 120 221 37 138 1.54e-34 129
MS.gene43785.t1 MTR_5g010650 57.732 97 41 0 119 215 108 204 2.38e-34 131
MS.gene43785.t1 MTR_5g010650 35.780 109 65 3 111 214 44 152 6.90e-11 63.5
MS.gene43785.t1 MTR_3g101290 50.980 102 50 0 120 221 36 137 9.08e-33 122
MS.gene43785.t1 MTR_4g094982 50.962 104 51 0 120 223 4 107 1.26e-32 122
MS.gene43785.t1 MTR_2g089450 35.747 221 112 8 119 310 12 231 1.81e-31 119
MS.gene43785.t1 MTR_5g016510 48.077 104 54 0 120 223 4 107 5.47e-31 119
MS.gene43785.t1 MTR_4g082040 46.667 120 64 0 102 221 86 205 2.17e-30 120
MS.gene43785.t1 MTR_0008s0390 50.485 103 48 2 121 221 15 116 2.18e-30 117
MS.gene43785.t1 MTR_2g089420 40.491 163 84 4 119 269 11 172 3.53e-30 119
MS.gene43785.t1 MTR_8g095390 48.113 106 53 2 121 224 14 119 9.75e-30 116
MS.gene43785.t1 MTR_0008s0470 45.000 120 63 2 121 238 15 133 2.36e-29 114
MS.gene43785.t1 MTR_5g041570 46.032 126 68 0 102 227 115 240 2.79e-29 117
MS.gene43785.t1 MTR_0251s0050 47.458 118 58 3 121 235 15 131 9.19e-29 112
MS.gene43785.t1 MTR_8g017440 47.573 103 51 2 121 221 14 115 1.03e-28 114
MS.gene43785.t1 MTR_4g485530 38.926 149 87 2 121 268 14 159 1.09e-28 110
MS.gene43785.t1 MTR_5g082910 47.959 98 51 0 120 217 18 115 1.49e-28 112
MS.gene43785.t1 MTR_6g074860 49.515 103 52 0 118 220 1 103 1.81e-28 110
MS.gene43785.t1 MTR_3g052450 52.381 105 48 2 119 221 40 144 1.89e-28 115
MS.gene43785.t1 MTR_4g100720 47.573 103 53 1 115 216 9 111 3.22e-28 108
MS.gene43785.t1 MTR_2g011660 43.966 116 64 1 107 221 1 116 3.50e-28 112
MS.gene43785.t1 MTR_5g010020 48.454 97 49 1 121 216 14 110 3.89e-28 112
MS.gene43785.t1 MTR_5g079670 48.544 103 50 2 121 221 13 114 4.20e-28 109
MS.gene43785.t1 MTR_5g029840 45.098 102 55 1 121 221 14 115 4.20e-28 112
MS.gene43785.t1 MTR_3g089045 39.759 166 86 2 111 268 6 165 4.42e-28 111
MS.gene43785.t1 MTR_5g078140 47.967 123 56 3 119 239 12 128 4.47e-28 111
MS.gene43785.t1 MTR_3g097450 38.816 152 74 4 121 264 14 154 5.50e-28 110
MS.gene43785.t1 MTR_1g085640 46.154 104 55 1 119 221 12 115 5.66e-28 112
MS.gene43785.t1 MTR_8g017540 48.544 103 50 2 121 221 60 161 5.89e-28 112
MS.gene43785.t1 MTR_4g073420 37.342 158 84 4 121 264 14 170 6.04e-28 110
MS.gene43785.t1 MTR_4g091490 44.444 117 62 2 107 221 1 116 8.06e-28 111
MS.gene43785.t1 MTR_6g009430 34.066 182 108 4 121 301 14 184 9.60e-28 111
MS.gene43785.t1 MTR_3g052430 52.830 106 46 3 119 221 41 145 1.06e-27 113
MS.gene43785.t1 MTR_4g102380 51.020 98 45 2 121 216 14 110 1.08e-27 109
MS.gene43785.t1 MTR_4g478180 45.763 118 60 3 106 221 1 116 1.13e-27 111
MS.gene43785.t1 MTR_2g064160 37.662 154 81 4 121 260 13 165 1.22e-27 110
MS.gene43785.t1 MTR_3g065440 50.476 105 49 2 119 221 12 115 1.32e-27 110
MS.gene43785.t1 MTR_4g063100 44.737 114 60 2 115 226 3 115 1.45e-27 108
MS.gene43785.t1 MTR_6g027340 47.525 101 53 0 121 221 16 116 1.60e-27 107
MS.gene43785.t1 MTR_3g077110 45.714 105 54 2 119 221 12 115 1.96e-27 110
MS.gene43785.t1 MTR_6g027360 48.544 103 53 0 119 221 76 178 2.00e-27 109
MS.gene43785.t1 MTR_2g097910 42.400 125 67 3 119 239 20 143 2.13e-27 109
MS.gene43785.t1 MTR_8g017340 47.573 103 52 1 121 221 14 116 2.41e-27 112
MS.gene43785.t1 MTR_1g085040 45.714 105 54 2 119 221 12 115 2.45e-27 110
MS.gene43785.t1 MTR_1g043050 36.697 218 120 8 119 328 12 219 2.55e-27 108
MS.gene43785.t1 MTR_1g112760 45.714 105 54 2 119 221 13 116 2.58e-27 107
MS.gene43785.t1 MTR_8g017500 47.573 103 51 2 121 221 14 115 2.90e-27 110
MS.gene43785.t1 MTR_7g086960 40.909 176 88 3 116 277 84 257 2.90e-27 110
MS.gene43785.t1 MTR_4g105130 39.041 146 78 4 119 263 12 147 2.91e-27 110
MS.gene43785.t1 MTR_8g031360 47.748 111 56 1 107 215 1 111 2.98e-27 108
MS.gene43785.t1 MTR_3g011610 49.057 106 50 3 118 220 36 140 2.99e-27 112
MS.gene43785.t1 MTR_3g461490 45.763 118 62 2 107 223 1 117 3.24e-27 109
MS.gene43785.t1 MTR_4g065017 41.667 132 73 2 112 242 10 138 3.39e-27 109
MS.gene43785.t1 MTR_3g074520 47.619 105 52 2 119 221 12 115 3.58e-27 109
MS.gene43785.t1 MTR_2g099740 45.631 103 53 2 121 221 14 115 4.01e-27 110
MS.gene43785.t1 MTR_6g015455 44.231 104 58 0 120 223 4 107 4.58e-27 112
MS.gene43785.t1 MTR_8g042410 48.113 106 52 2 118 221 36 140 5.15e-27 111
MS.gene43785.t1 MTR_8g098860 46.392 97 51 1 121 216 14 110 5.30e-27 108
MS.gene43785.t1 MTR_1g045610 52.000 100 45 2 117 214 19 117 6.15e-27 107
MS.gene43785.t1 MTR_1g073170 49.038 104 50 2 121 222 22 124 6.60e-27 107
MS.gene43785.t1 MTR_8g017390 46.602 103 53 1 121 221 14 116 8.23e-27 110
MS.gene43785.t1 MTR_4g082230 41.538 130 70 2 119 242 12 141 8.39e-27 109
MS.gene43785.t1 MTR_7g111290 49.495 99 47 2 119 215 12 109 9.23e-27 109
MS.gene43785.t1 MTR_7g110830 44.231 104 57 1 119 221 12 115 1.06e-26 108
MS.gene43785.t1 MTR_3g028740 41.880 117 67 1 106 221 9 125 1.08e-26 108
MS.gene43785.t1 MTR_4g082290 41.538 130 70 2 119 242 12 141 1.25e-26 109
MS.gene43785.t1 MTR_6g027370 36.517 178 99 3 97 273 81 245 1.40e-26 108
MS.gene43785.t1 MTR_0063s0090 32.701 211 111 7 121 306 14 218 1.47e-26 105
MS.gene43785.t1 MTR_8g017350 46.602 103 53 1 121 221 14 116 1.58e-26 110
MS.gene43785.t1 MTR_8g027345 48.485 99 50 1 119 216 12 110 2.08e-26 106
MS.gene43785.t1 MTR_4g125520 37.423 163 87 4 117 265 10 171 2.28e-26 106
MS.gene43785.t1 MTR_2g034790 50.000 104 51 1 119 221 12 115 3.37e-26 107
MS.gene43785.t1 MTR_7g011170 49.000 100 48 2 119 216 12 110 4.48e-26 105
MS.gene43785.t1 MTR_5g007370 44.762 105 55 2 119 221 12 115 5.81e-26 105
MS.gene43785.t1 MTR_7g096930 45.600 125 62 4 119 238 12 135 8.51e-26 104
MS.gene43785.t1 MTR_5g042030 42.742 124 65 2 119 241 7 125 1.02e-25 104
MS.gene43785.t1 MTR_1g110460 44.231 104 57 1 119 221 26 129 1.34e-25 104
MS.gene43785.t1 MTR_7g035075 43.220 118 64 2 121 237 16 131 1.48e-25 102
MS.gene43785.t1 MTR_7g117730 46.465 99 52 1 119 216 12 110 2.39e-25 102
MS.gene43785.t1 MTR_4g121460 47.115 104 54 1 119 221 12 115 2.52e-25 104
MS.gene43785.t1 MTR_7g076740 50.505 99 47 1 119 215 12 110 2.82e-25 103
MS.gene43785.t1 MTR_2g089620 45.192 104 56 1 119 221 12 115 3.12e-25 103
MS.gene43785.t1 MTR_2g096380 43.750 112 60 2 117 226 4 114 3.48e-25 102
MS.gene43785.t1 MTR_0197s0010 50.526 95 44 2 124 216 6 99 3.62e-25 101
MS.gene43785.t1 MTR_1g021230 46.667 105 53 2 119 221 57 160 7.50e-25 104
MS.gene43785.t1 MTR_1g076150 41.958 143 71 4 119 259 12 144 9.20e-25 101
MS.gene43785.t1 MTR_6g006030 51.042 96 44 2 121 214 16 110 1.63e-24 99.4
MS.gene43785.t1 MTR_1g043080 33.333 222 127 7 119 327 12 225 2.08e-24 100
MS.gene43785.t1 MTR_1g062940 47.959 98 48 2 119 214 6 102 2.52e-24 99.4
MS.gene43785.t1 MTR_8g020490 48.454 97 49 1 121 216 10 106 2.74e-24 100
MS.gene43785.t1 MTR_1g100653 47.423 97 48 2 121 215 14 109 3.31e-24 100
MS.gene43785.t1 MTR_1g083630 47.115 104 54 1 119 221 12 115 4.24e-24 103
MS.gene43785.t1 MTR_4g097570 37.121 132 79 3 107 235 1 131 5.61e-24 100
MS.gene43785.t1 MTR_4g029540 40.152 132 76 3 121 250 12 142 6.29e-24 100
MS.gene43785.t1 MTR_2g095520 38.776 147 79 4 121 258 14 158 7.74e-24 100
MS.gene43785.t1 MTR_8g006470 44.545 110 59 2 113 220 4 113 8.57e-24 99.4
MS.gene43785.t1 MTR_6g012690 44.231 104 57 1 119 221 12 115 1.03e-23 100
MS.gene43785.t1 MTR_1g017140 40.833 120 67 3 121 236 14 133 1.07e-23 100
MS.gene43785.t1 MTR_0140s0030 41.964 112 64 1 121 231 15 126 1.84e-23 99.4
MS.gene43785.t1 MTR_0489s0020 41.964 112 64 1 121 231 15 126 1.84e-23 99.4
MS.gene43785.t1 MTR_1g086530 34.375 160 100 3 113 270 27 183 1.92e-23 98.2
MS.gene43785.t1 MTR_5g062790 45.794 107 54 3 121 224 11 116 2.03e-23 98.6
MS.gene43785.t1 MTR_0008s0280 42.857 98 53 2 121 216 14 110 2.32e-23 97.1
MS.gene43785.t1 MTR_2g067420 42.727 110 61 2 108 216 4 112 2.76e-23 99.0
MS.gene43785.t1 MTR_5g014990 41.228 114 65 2 121 232 14 127 3.81e-23 98.2
MS.gene43785.t1 MTR_7g115650 42.157 102 58 1 121 221 14 115 3.83e-23 95.9
MS.gene43785.t1 MTR_5g078910 40.367 109 64 1 114 221 2 110 3.83e-23 97.8
MS.gene43785.t1 MTR_3g083540 44.444 99 54 1 119 216 41 139 4.45e-23 97.8
MS.gene43785.t1 MTR_6g090405 30.457 197 105 6 107 297 1 171 4.91e-23 96.7
MS.gene43785.t1 MTR_4g097570 36.641 131 80 3 107 235 1 130 5.21e-23 97.4
MS.gene43785.t1 MTR_5g079290 38.938 113 68 1 114 225 12 124 5.77e-23 96.7
MS.gene43785.t1 MTR_7g010210 41.880 117 62 2 117 232 10 121 7.14e-23 97.4
MS.gene43785.t1 MTR_2g088170 52.830 106 46 3 119 221 29 133 8.78e-23 99.0
MS.gene43785.t1 MTR_0001s0360 43.299 97 54 1 121 216 9 105 1.15e-22 95.5
MS.gene43785.t1 MTR_7g010210 41.880 117 62 2 117 232 10 121 1.30e-22 95.9
MS.gene43785.t1 MTR_5g088640 45.631 103 52 3 121 220 14 115 1.46e-22 95.9
MS.gene43785.t1 MTR_4g057635 39.316 117 68 3 107 221 1 116 1.56e-22 96.7
MS.gene43785.t1 MTR_5g088080 45.631 103 52 3 121 220 14 115 1.61e-22 95.5
MS.gene43785.t1 MTR_5g088150 45.631 103 52 3 121 220 14 115 1.61e-22 95.5
MS.gene43785.t1 MTR_5g488210 45.631 103 52 3 121 220 14 115 1.61e-22 95.5
MS.gene43785.t1 MTR_3g039990 34.731 167 99 3 121 281 15 177 2.12e-22 95.9
MS.gene43785.t1 MTR_5g079220 40.566 106 62 1 121 225 23 128 3.22e-22 94.7
MS.gene43785.t1 MTR_5g488170 44.118 102 55 2 121 220 14 115 3.36e-22 94.0
MS.gene43785.t1 MTR_6g012180 44.000 100 55 1 117 215 10 109 3.47e-22 95.5
MS.gene43785.t1 MTR_3g103570 42.478 113 62 3 121 231 14 125 3.48e-22 95.9
MS.gene43785.t1 MTR_1g086510 39.683 126 72 2 111 235 13 135 4.00e-22 94.4
MS.gene43785.t1 MTR_6g055910 34.351 131 85 1 121 250 16 146 4.43e-22 94.7
MS.gene43785.t1 MTR_2g033170 41.322 121 67 2 119 238 24 141 6.02e-22 95.1
MS.gene43785.t1 MTR_7g017260 38.889 126 63 3 95 216 10 125 6.58e-22 94.0
MS.gene43785.t1 MTR_1g017000 39.252 107 63 2 117 221 10 116 7.87e-22 93.2
MS.gene43785.t1 MTR_1g100667 39.048 105 63 1 121 224 15 119 1.35e-21 93.2
MS.gene43785.t1 MTR_7g102110 42.718 103 57 2 121 221 14 116 1.54e-21 92.8
MS.gene43785.t1 MTR_5g078950 37.383 107 66 1 114 219 2 108 1.81e-21 92.4
MS.gene43785.t1 MTR_5g088610 43.137 102 56 2 121 220 11 112 2.43e-21 93.6
MS.gene43785.t1 MTR_4g123040 37.589 141 83 3 96 235 2 138 3.29e-21 92.8
MS.gene43785.t1 MTR_5g078930 41.129 124 71 2 114 235 4 127 3.93e-21 90.5
MS.gene43785.t1 MTR_1g008970 49.495 99 45 2 146 239 116 214 4.14e-21 91.3
MS.gene43785.t1 MTR_5g079120 38.710 124 75 1 109 231 51 174 4.90e-21 92.0
MS.gene43785.t1 MTR_5g078800 39.450 109 65 1 114 221 2 110 5.67e-21 91.3
MS.gene43785.t1 MTR_5g078860 38.532 109 66 1 114 221 2 110 1.41e-20 90.9
MS.gene43785.t1 MTR_0247s0040 43.000 100 56 1 121 219 9 108 1.78e-20 87.8
MS.gene43785.t1 MTR_7g087130 37.391 115 71 1 121 234 14 128 1.84e-20 90.9
MS.gene43785.t1 MTR_8g060940 43.158 95 53 1 121 214 9 103 1.97e-20 89.4
MS.gene43785.t1 MTR_4g128670 43.878 98 53 2 121 216 14 111 2.64e-20 90.9
MS.gene43785.t1 MTR_5g038910 41.837 98 57 0 124 221 29 126 4.00e-20 91.3
MS.gene43785.t1 MTR_5g038910 41.837 98 57 0 124 221 29 126 6.12e-20 90.1
MS.gene43785.t1 MTR_7g109320 50.476 105 49 2 119 221 12 115 1.44e-19 88.6
MS.gene43785.t1 MTR_4g128190 40.179 112 54 3 114 224 6 105 2.05e-19 86.3
MS.gene43785.t1 MTR_7g111290 56.452 62 27 0 154 215 6 67 2.14e-19 88.2
MS.gene43785.t1 MTR_8g468380 36.975 119 69 1 124 242 25 137 6.87e-19 87.4
MS.gene43785.t1 MTR_3g045430 35.043 117 75 1 109 224 3 119 9.09e-19 85.5
MS.gene43785.t1 MTR_4g063100 46.575 73 39 0 154 226 14 86 9.65e-19 84.0
MS.gene43785.t1 MTR_7g061550 35.294 136 84 2 116 247 2 137 9.92e-19 86.3
MS.gene43785.t1 MTR_0193s0090 39.604 101 60 1 121 220 9 109 7.85e-18 81.3
MS.gene43785.t1 MTR_6g055910 35.052 97 63 0 154 250 21 117 4.03e-17 80.1
MS.gene43785.t1 MTR_2g096380 43.836 73 41 0 154 226 23 95 1.55e-16 77.8
MS.gene43785.t1 MTR_7g035300 37.383 107 55 3 123 229 78 172 1.88e-16 77.8
MS.gene43785.t1 MTR_1g085880 39.640 111 64 3 114 221 6 116 2.29e-15 73.9
MS.gene43785.t1 MTR_5g007300 40.260 77 45 1 119 194 64 140 4.82e-15 71.6
MS.gene43785.t1 MTR_1g085770 40.000 110 63 3 114 220 6 115 6.65e-15 74.7
MS.gene43785.t1 MTR_6g080360 35.593 118 75 1 121 238 530 646 1.56e-14 75.1
MS.gene43785.t1 MTR_6g080360 36.458 96 60 1 119 214 477 571 1.85e-13 72.0
MS.gene43785.t1 MTR_6g080360 35.593 118 75 1 121 238 310 426 2.60e-14 74.3
MS.gene43785.t1 MTR_6g080360 36.458 96 60 1 119 214 257 351 3.39e-13 70.9
MS.gene43785.t1 MTR_7g115550 40.000 90 52 2 118 206 3 91 7.98e-11 63.9
MS.gene43785.t1 MTR_7g115550 40.000 90 52 2 118 206 3 91 8.63e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43785.t1 AT5G58850 69.863 146 38 1 111 250 95 240 1.69e-67 218
MS.gene43785.t1 AT5G11050 52.995 217 79 4 110 309 94 304 9.94e-64 208
MS.gene43785.t1 AT4G18770 45.415 229 101 6 42 263 141 352 1.02e-59 198
MS.gene43785.t1 AT3G27785 63.448 145 48 2 109 252 177 317 2.32e-57 192
MS.gene43785.t1 AT5G40360 52.817 142 62 1 111 252 148 284 2.24e-48 166
MS.gene43785.t1 AT3G09370 61.538 104 40 0 119 222 133 236 6.32e-41 150
MS.gene43785.t1 AT3G09370 61.538 104 40 0 119 222 128 231 6.53e-41 150
MS.gene43785.t1 AT3G09370 61.538 104 40 0 119 222 141 244 8.22e-41 150
MS.gene43785.t1 AT5G02320 61.165 103 40 0 119 221 125 227 3.02e-40 149
MS.gene43785.t1 AT5G02320 61.165 103 40 0 119 221 125 227 3.02e-40 149
MS.gene43785.t1 AT5G02320 61.165 103 40 0 119 221 65 167 3.49e-40 147
MS.gene43785.t1 AT2G25230 49.242 132 60 1 121 252 26 150 4.04e-37 133
MS.gene43785.t1 AT5G11510 53.398 103 48 0 119 221 79 181 2.05e-36 139
MS.gene43785.t1 AT5G11510 53.398 103 48 0 119 221 79 181 2.11e-36 139
MS.gene43785.t1 AT5G11510 53.398 103 48 0 119 221 79 181 2.18e-36 140
MS.gene43785.t1 AT5G11510 53.398 103 48 0 119 221 79 181 2.18e-36 140
MS.gene43785.t1 AT5G11510 53.398 103 48 0 119 221 79 181 2.18e-36 140
MS.gene43785.t1 AT4G32730 53.398 103 48 0 119 221 85 187 1.19e-35 137
MS.gene43785.t1 AT4G32730 53.398 103 48 0 119 221 85 187 1.19e-35 137
MS.gene43785.t1 AT4G32730 53.398 103 48 0 119 221 85 187 1.19e-35 137
MS.gene43785.t1 AT4G32730 53.398 103 48 0 119 221 85 187 1.19e-35 137
MS.gene43785.t1 AT4G32730 53.398 103 48 0 119 221 85 187 1.65e-35 137
MS.gene43785.t1 AT5G40430 45.522 134 65 2 119 252 52 177 1.58e-33 124
MS.gene43785.t1 AT4G00540 47.945 146 72 2 119 260 101 246 7.77e-33 126
MS.gene43785.t1 AT4G00540 47.945 146 72 2 119 260 99 244 1.22e-32 126
MS.gene43785.t1 AT3G55730 51.961 102 49 0 120 221 55 156 1.41e-31 122
MS.gene43785.t1 AT1G69560 36.612 183 107 3 94 271 80 258 1.81e-30 118
MS.gene43785.t1 AT3G50060 46.154 104 56 0 120 223 5 108 2.00e-30 117
MS.gene43785.t1 AT1G69560 36.612 183 107 3 94 271 96 274 2.01e-30 118
MS.gene43785.t1 AT3G09230 50.980 102 50 0 120 221 54 155 2.56e-30 119
MS.gene43785.t1 AT3G11440 51.852 108 50 2 118 223 40 147 2.73e-30 120
MS.gene43785.t1 AT1G17950 41.781 146 81 2 121 262 5 150 2.96e-30 115
MS.gene43785.t1 AT3G11440 51.852 108 50 2 118 223 40 147 6.24e-30 120
MS.gene43785.t1 AT3G11440 51.852 108 50 2 118 223 40 147 6.24e-30 120
MS.gene43785.t1 AT3G11440 51.852 108 50 2 118 223 40 147 6.24e-30 120
MS.gene43785.t1 AT3G29020 49.123 114 55 1 113 223 57 170 1.02e-29 114
MS.gene43785.t1 AT5G67300 48.039 102 53 0 120 221 5 106 1.41e-29 115
MS.gene43785.t1 AT2G23290 46.018 113 59 1 111 223 5 115 1.54e-29 115
MS.gene43785.t1 AT4G37260 47.115 104 55 0 120 223 12 115 2.03e-29 115
MS.gene43785.t1 AT3G29020 49.123 114 55 1 113 223 59 172 3.62e-29 114
MS.gene43785.t1 AT4G26930 46.154 104 55 1 118 220 18 121 7.57e-29 115
MS.gene43785.t1 AT2G39880 49.020 102 52 0 120 221 49 150 1.24e-28 114
MS.gene43785.t1 AT2G32460 46.094 128 60 4 97 221 1 122 1.47e-28 115
MS.gene43785.t1 AT3G28470 46.847 111 57 2 107 216 1 110 1.96e-28 112
MS.gene43785.t1 AT5G14750 35.676 185 107 4 121 297 18 198 2.36e-28 109
MS.gene43785.t1 AT2G32460 50.943 106 48 3 119 221 6 110 2.37e-28 115
MS.gene43785.t1 AT5G06100 50.000 108 52 2 118 223 31 138 2.53e-28 114
MS.gene43785.t1 AT1G74080 51.961 102 48 1 116 216 9 110 3.39e-28 112
MS.gene43785.t1 AT4G01680 39.286 140 74 2 119 257 12 141 4.84e-28 112
MS.gene43785.t1 AT1G35515 47.059 102 53 1 121 221 14 115 4.91e-28 108
MS.gene43785.t1 AT1G26780 45.600 125 65 1 118 239 95 219 5.06e-28 110
MS.gene43785.t1 AT4G38620 47.573 103 51 2 121 221 14 115 5.16e-28 110
MS.gene43785.t1 AT5G06100 50.000 108 52 2 118 223 31 138 5.41e-28 114
MS.gene43785.t1 AT5G06100 50.000 108 52 2 118 223 31 138 5.41e-28 114
MS.gene43785.t1 AT5G06100 50.000 108 52 2 118 223 31 138 5.41e-28 114
MS.gene43785.t1 AT5G06100 50.000 108 52 2 118 223 31 138 5.41e-28 114
MS.gene43785.t1 AT1G66230 44.882 127 62 3 119 243 12 132 6.21e-28 110
MS.gene43785.t1 AT1G63910 49.485 97 48 1 121 216 14 110 6.67e-28 112
MS.gene43785.t1 AT5G16770 47.115 104 54 1 119 221 12 115 6.81e-28 111
MS.gene43785.t1 AT5G16770 47.115 104 54 1 119 221 12 115 6.81e-28 111
MS.gene43785.t1 AT5G26660 44.954 109 57 2 119 225 12 119 7.31e-28 112
MS.gene43785.t1 AT4G01680 39.286 140 74 2 119 257 12 141 7.76e-28 109
MS.gene43785.t1 AT1G26780 45.600 125 65 1 118 239 95 219 7.98e-28 112
MS.gene43785.t1 AT5G07700 48.113 106 54 1 117 221 10 115 9.49e-28 111
MS.gene43785.t1 AT5G07700 48.113 106 54 1 117 221 10 115 9.49e-28 111
MS.gene43785.t1 AT3G23250 34.021 194 118 4 119 309 12 198 9.64e-28 110
MS.gene43785.t1 AT5G16770 47.115 104 54 1 119 221 12 115 1.03e-27 111
MS.gene43785.t1 AT5G16770 47.115 104 54 1 119 221 12 115 1.03e-27 111
MS.gene43785.t1 AT1G18570 39.216 153 76 3 119 270 13 149 1.20e-27 111
MS.gene43785.t1 AT1G68320 33.491 212 121 7 117 311 17 225 1.27e-27 109
MS.gene43785.t1 AT3G12720 44.660 103 54 2 121 221 24 125 1.39e-27 110
MS.gene43785.t1 AT5G07690 50.495 101 49 1 117 216 10 110 1.46e-27 110
MS.gene43785.t1 AT1G09540 46.789 109 55 2 119 225 12 119 1.71e-27 111
MS.gene43785.t1 AT4G28110 46.667 105 55 1 121 224 14 118 1.77e-27 109
MS.gene43785.t1 AT1G57560 46.667 105 53 2 119 221 12 115 2.15e-27 108
MS.gene43785.t1 AT1G57560 46.667 105 53 2 119 221 12 115 2.33e-27 109
MS.gene43785.t1 AT5G61420 49.505 101 50 1 117 216 10 110 3.22e-27 110
MS.gene43785.t1 AT1G74430 44.444 108 59 1 119 225 12 119 4.37e-27 108
MS.gene43785.t1 AT3G13890 43.137 102 57 1 121 221 14 115 4.88e-27 109
MS.gene43785.t1 AT4G33450 49.524 105 50 1 121 222 19 123 4.89e-27 107
MS.gene43785.t1 AT3G02940 46.154 104 55 1 119 221 12 115 4.95e-27 108
MS.gene43785.t1 AT1G22640 45.631 103 53 2 121 221 14 115 6.24e-27 107
MS.gene43785.t1 AT4G05100 43.966 116 64 1 107 221 1 116 6.32e-27 108
MS.gene43785.t1 AT4G12350 48.544 103 50 2 121 221 14 115 6.81e-27 107
MS.gene43785.t1 AT4G09460 44.660 103 54 2 121 221 14 115 7.15e-27 106
MS.gene43785.t1 AT3G02940 46.154 104 55 1 119 221 12 115 7.43e-27 108
MS.gene43785.t1 AT3G02940 46.154 104 55 1 119 221 12 115 7.43e-27 108
MS.gene43785.t1 AT4G01680 37.500 152 72 3 119 257 12 153 9.21e-27 108
MS.gene43785.t1 AT5G17800 43.902 123 66 1 116 235 88 210 9.91e-27 108
MS.gene43785.t1 AT5G10280 45.714 105 54 2 119 221 12 115 1.00e-26 108
MS.gene43785.t1 AT3G61250 51.515 99 45 2 119 215 12 109 1.00e-26 107
MS.gene43785.t1 AT4G13480 46.565 131 60 4 117 245 4 126 1.09e-26 106
MS.gene43785.t1 AT5G55020 44.231 104 57 1 118 220 25 128 1.27e-26 110
MS.gene43785.t1 AT3G01530 46.429 112 57 2 111 220 17 127 1.50e-26 104
MS.gene43785.t1 AT4G21440 45.192 104 56 1 119 221 12 115 1.56e-26 108
MS.gene43785.t1 AT5G65230 47.619 105 52 2 119 221 12 115 1.80e-26 107
MS.gene43785.t1 AT5G35550 41.803 122 70 1 109 229 4 125 1.82e-26 105
MS.gene43785.t1 AT4G22680 47.573 103 51 2 121 221 14 115 1.82e-26 106
MS.gene43785.t1 AT3G24310 47.244 127 57 4 121 245 20 138 2.30e-26 105
MS.gene43785.t1 AT5G56110 40.373 161 81 5 107 266 1 147 2.73e-26 107
MS.gene43785.t1 AT4G34990 45.283 106 57 1 121 225 14 119 3.36e-26 105
MS.gene43785.t1 AT3G13890 40.541 111 56 2 121 221 14 124 4.30e-26 107
MS.gene43785.t1 AT3G08500 45.192 104 56 1 119 221 30 133 4.32e-26 106
MS.gene43785.t1 AT5G60890 47.170 106 55 1 117 221 10 115 4.34e-26 105
MS.gene43785.t1 AT5G40330 42.202 109 62 1 109 216 2 110 5.14e-26 103
MS.gene43785.t1 AT1G73410 51.402 107 49 1 121 224 6 112 5.22e-26 104
MS.gene43785.t1 AT1G73410 51.402 107 49 1 121 224 6 112 6.60e-26 103
MS.gene43785.t1 AT5G59780 42.982 114 62 2 121 232 10 122 7.17e-26 103
MS.gene43785.t1 AT5G12870 44.118 102 56 1 121 221 20 121 7.55e-26 104
MS.gene43785.t1 AT3G13540 30.417 240 135 7 109 320 13 248 8.25e-26 103
MS.gene43785.t1 AT5G40350 43.548 124 65 2 121 243 19 138 1.00e-25 102
MS.gene43785.t1 AT3G27810 42.105 133 74 2 121 252 22 152 1.05e-25 103
MS.gene43785.t1 AT3G46130 43.860 114 61 2 121 232 11 123 1.38e-25 103
MS.gene43785.t1 AT1G06180 46.154 117 58 3 119 231 12 127 1.39e-25 103
MS.gene43785.t1 AT1G16490 44.167 120 63 3 121 237 16 134 1.54e-25 103
MS.gene43785.t1 AT5G16600 52.000 100 45 2 119 216 12 110 2.01e-25 104
MS.gene43785.t1 AT2G16720 43.689 103 55 2 121 221 14 115 2.03e-25 103
MS.gene43785.t1 AT2G26960 46.602 103 54 1 119 220 20 122 2.83e-25 105
MS.gene43785.t1 AT5G15310 45.192 104 56 1 119 221 12 115 2.95e-25 104
MS.gene43785.t1 AT5G15310 45.192 104 56 1 119 221 12 115 3.02e-25 103
MS.gene43785.t1 AT5G15310 47.475 99 51 1 119 216 12 110 3.19e-25 102
MS.gene43785.t1 AT3G01140 47.959 98 50 1 119 215 12 109 3.94e-25 104
MS.gene43785.t1 AT3G01140 47.959 98 50 1 119 215 55 152 5.28e-25 104
MS.gene43785.t1 AT3G53200 44.860 107 56 2 117 221 7 112 6.03e-25 101
MS.gene43785.t1 AT5G54230 43.810 105 58 1 121 224 14 118 6.88e-25 103
MS.gene43785.t1 AT4G17785 42.735 117 64 2 107 221 1 116 7.84e-25 103
MS.gene43785.t1 AT4G17785 42.735 117 64 2 107 221 1 116 7.91e-25 103
MS.gene43785.t1 AT5G52600 41.525 118 67 2 112 227 5 122 8.83e-25 100
MS.gene43785.t1 AT2G31180 43.860 114 61 2 121 232 14 126 9.34e-25 101
MS.gene43785.t1 AT5G39700 39.370 127 76 1 95 220 29 155 1.02e-24 99.4
MS.gene43785.t1 AT3G27920 46.392 97 51 1 121 216 16 112 1.09e-24 100
MS.gene43785.t1 AT1G34670 44.231 104 57 1 119 221 12 115 1.91e-24 102
MS.gene43785.t1 AT2G26950 43.119 109 53 2 117 220 14 118 1.99e-24 102
MS.gene43785.t1 AT5G62320 44.737 114 55 3 119 224 13 126 2.41e-24 100
MS.gene43785.t1 AT2G47190 43.750 112 61 2 111 221 13 123 3.71e-24 100
MS.gene43785.t1 AT5G57620 42.241 116 65 2 121 234 14 129 4.20e-24 101
MS.gene43785.t1 AT1G48000 42.017 119 65 2 121 238 34 149 5.45e-24 99.0
MS.gene43785.t1 AT5G62470 42.241 116 66 1 121 236 14 128 5.91e-24 100
MS.gene43785.t1 AT5G23000 42.735 117 64 3 107 221 1 116 9.09e-24 100
MS.gene43785.t1 AT3G48920 41.667 120 66 2 121 239 20 136 1.13e-23 98.6
MS.gene43785.t1 AT3G62610 46.078 102 54 1 121 221 14 115 1.20e-23 100
MS.gene43785.t1 AT3G30210 29.381 194 128 5 121 312 29 215 1.23e-23 98.6
MS.gene43785.t1 AT1G79180 34.320 169 93 3 121 287 16 168 1.56e-23 99.0
MS.gene43785.t1 AT1G56160 44.898 98 51 2 121 216 16 112 1.65e-23 99.0
MS.gene43785.t1 AT4G25560 41.593 113 65 1 110 221 1 113 2.18e-23 98.2
MS.gene43785.t1 AT5G49330 46.154 104 55 1 119 221 12 115 2.47e-23 99.4
MS.gene43785.t1 AT1G25340 35.484 186 109 5 121 301 20 199 2.78e-23 97.8
MS.gene43785.t1 AT1G18710 42.453 106 60 1 121 225 14 119 2.79e-23 97.4
MS.gene43785.t1 AT3G60460 45.283 106 56 2 117 220 9 114 5.26e-23 97.4
MS.gene43785.t1 AT3G47600 37.795 127 78 1 121 246 14 140 8.12e-23 97.4
MS.gene43785.t1 AT5G14340 43.810 105 56 2 119 221 24 127 8.51e-23 96.3
MS.gene43785.t1 AT1G25340 34.239 184 109 4 121 301 20 194 1.20e-22 96.3
MS.gene43785.t1 AT1G74650 43.103 116 64 2 107 221 1 115 1.27e-22 97.1
MS.gene43785.t1 AT3G49690 44.545 110 57 3 121 226 14 123 1.69e-22 96.3
MS.gene43785.t1 AT5G49620 40.945 127 71 2 110 235 17 140 2.25e-22 95.9
MS.gene43785.t1 AT5G62470 41.880 117 66 2 121 236 14 129 2.41e-22 96.7
MS.gene43785.t1 AT1G25340 34.239 184 109 4 121 301 20 194 3.79e-22 95.1
MS.gene43785.t1 AT2G47460 44.118 102 56 1 121 221 14 115 4.40e-22 96.3
MS.gene43785.t1 AT5G65790 44.545 110 57 3 121 226 14 123 1.57e-21 94.7
MS.gene43785.t1 AT1G66370 38.017 121 74 1 114 233 3 123 1.73e-21 92.0
MS.gene43785.t1 AT3G28910 46.875 96 50 1 121 215 14 109 1.94e-21 93.6
MS.gene43785.t1 AT3G06490 41.176 119 64 3 119 235 19 133 4.37e-21 92.4
MS.gene43785.t1 AT4G37780 37.273 110 67 2 121 228 14 123 6.95e-21 91.7
MS.gene43785.t1 AT5G14750 33.775 151 89 3 154 297 18 164 6.96e-21 88.6
MS.gene43785.t1 AT5G26660 48.611 72 37 0 154 225 17 88 7.70e-21 92.0
MS.gene43785.t1 AT3G12820 40.187 107 61 2 121 225 16 121 1.13e-20 89.7
MS.gene43785.t1 AT1G66380 45.098 102 55 1 115 215 4 105 1.30e-20 87.0
MS.gene43785.t1 AT5G35550 48.684 76 39 0 154 229 53 128 2.12e-20 89.7
MS.gene43785.t1 AT5G52260 34.591 159 73 4 121 274 14 146 3.28e-20 89.4
MS.gene43785.t1 AT3G27810 47.778 90 45 1 154 243 7 94 3.72e-20 86.7
MS.gene43785.t1 AT1G56650 44.660 103 56 1 115 216 4 106 3.94e-20 88.6
MS.gene43785.t1 AT1G08810 42.268 97 55 1 121 216 14 110 5.01e-20 89.0
MS.gene43785.t1 AT1G14350 38.938 113 68 1 124 235 28 140 5.91e-20 90.5
MS.gene43785.t1 AT1G14350 38.938 113 68 1 124 235 28 140 5.91e-20 90.5
MS.gene43785.t1 AT1G79180 31.788 151 69 2 121 237 16 166 6.80e-20 89.4
MS.gene43785.t1 AT5G40350 45.556 90 45 1 154 243 8 93 9.05e-20 85.5
MS.gene43785.t1 AT1G66390 45.098 102 55 1 115 215 4 105 1.79e-19 86.7
MS.gene43785.t1 AT2G02820 40.816 98 58 0 124 221 33 130 3.11e-19 89.0
MS.gene43785.t1 AT2G02820 40.816 98 58 0 124 221 33 130 3.56e-19 88.6
MS.gene43785.t1 AT2G02820 43.956 91 51 0 124 214 33 123 4.27e-19 87.0
MS.gene43785.t1 AT2G36890 40.777 103 59 2 121 221 14 116 5.61e-19 86.3
MS.gene43785.t1 AT5G49620 36.879 141 71 3 110 235 17 154 5.87e-19 86.7
MS.gene43785.t1 AT2G36890 40.777 103 59 2 121 221 55 157 1.18e-18 85.9
MS.gene43785.t1 AT5G59780 44.304 79 44 0 154 232 23 101 3.27e-18 82.4
MS.gene43785.t1 AT3G47600 36.207 116 71 1 131 246 22 134 5.27e-18 84.0
MS.gene43785.t1 AT3G46130 44.304 79 44 0 154 232 23 101 1.27e-17 81.3
MS.gene43785.t1 AT3G46130 44.304 79 44 0 154 232 13 91 1.53e-17 80.9
MS.gene43785.t1 AT2G37630 33.594 128 82 1 123 247 6 133 2.76e-17 82.4
MS.gene43785.t1 AT3G53200 48.529 68 35 0 154 221 12 79 9.44e-17 78.2
MS.gene43785.t1 AT3G12820 45.833 72 39 0 154 225 2 73 1.22e-16 77.4
MS.gene43785.t1 AT3G23250 45.570 79 41 1 165 241 2 80 2.87e-16 77.4
MS.gene43785.t1 AT3G18100 38.144 97 58 2 119 214 493 588 3.40e-15 77.0
MS.gene43785.t1 AT3G18100 36.170 94 60 0 121 214 546 639 3.41e-14 73.9
MS.gene43785.t1 AT3G18100 38.144 97 58 2 119 214 445 540 3.71e-15 77.0
MS.gene43785.t1 AT3G18100 36.170 94 60 0 121 214 498 591 3.31e-14 73.9
MS.gene43785.t1 AT5G14750 39.175 97 55 2 165 261 2 94 6.33e-15 71.6
MS.gene43785.t1 AT5G14750 39.175 97 55 2 165 261 2 94 6.33e-15 71.6
MS.gene43785.t1 AT3G18100 38.144 97 58 2 119 214 332 427 6.58e-15 76.3
MS.gene43785.t1 AT3G18100 36.170 94 60 0 121 214 385 478 5.55e-14 73.2
MS.gene43785.t1 AT3G18100 38.144 97 58 2 119 214 280 375 8.30e-15 75.9
MS.gene43785.t1 AT3G18100 36.170 94 60 0 121 214 333 426 6.94e-14 73.2
MS.gene43785.t1 AT1G71030 41.538 65 38 0 157 221 5 69 1.13e-14 71.6
MS.gene43785.t1 AT1G71030 41.538 65 38 0 157 221 19 83 1.28e-14 72.0
MS.gene43785.t1 AT1G22640 47.368 57 30 0 165 221 2 58 1.76e-14 71.6
MS.gene43785.t1 AT1G66380 47.619 63 33 0 154 216 11 73 9.22e-13 64.3
MS.gene43785.t1 AT1G66380 41.463 82 47 1 115 195 4 85 1.50e-11 61.2
MS.gene43785.t1 AT1G18960 30.469 128 80 4 121 247 10 129 3.45e-11 63.9
MS.gene43785.t1 AT1G14350 40.000 75 44 1 162 235 23 97 4.20e-11 63.9
MS.gene43785.t1 AT1G14350 40.000 75 44 1 162 235 23 97 4.20e-11 63.9

Find 70 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCCAACGGTTTCCAATTT+TGG 0.083397 5.1:+54451508 None:intergenic
AAGCTTGATTCTTGAGTATT+TGG 0.147400 5.1:+54452989 None:intergenic
TCATTTGCGTCCTGATATTA+AGG 0.222411 5.1:-54452491 MS.gene43785:intron
AGCAATATGGTGAAAGAAAA+TGG 0.229075 5.1:-54452576 MS.gene43785:CDS
AGTATGTTCCCTTACTCTTA+TGG 0.253114 5.1:-54453034 MS.gene43785:CDS
CTTTCATGGATAGATTCTTA+TGG 0.253266 5.1:-54453099 MS.gene43785:CDS
AGTGCATGCATGTTGTAATT+TGG 0.255080 5.1:+54451101 None:intergenic
ATTTATGACAGAAAGATAAT+TGG 0.266925 5.1:-54451568 MS.gene43785:intron
GTCAATGGCGTTAAAATCTT+TGG 0.273706 5.1:-54453148 MS.gene43785:CDS
GTAGCTACACATGCCAAAAT+TGG 0.303292 5.1:-54451521 MS.gene43785:CDS
ATCATTGGAATGCCACTAAA+AGG 0.314844 5.1:-54451439 MS.gene43785:CDS
TTTCATGGATAGATTCTTAT+GGG 0.320364 5.1:-54453098 MS.gene43785:CDS
CTTAAGGATATTCAAGGTTA+TGG 0.350445 5.1:-54452893 MS.gene43785:CDS
TAAGGCACAATGTGGAAGTT+TGG 0.351661 5.1:+54452912 None:intergenic
GAATCAAGCTTTGTTGTTGA+TGG 0.356694 5.1:-54452977 MS.gene43785:CDS
ATAAAGTTGGTTAAGCAATA+TGG 0.364894 5.1:-54452589 MS.gene43785:CDS
GCATGTTGTAATTTGGGTAT+TGG 0.366477 5.1:+54451108 None:intergenic
AACTTCCACATTGTGCCTTA+AGG 0.380633 5.1:-54452909 MS.gene43785:CDS
CAAATAGCTGAGAAGTTAGA+AGG 0.389483 5.1:-54452550 MS.gene43785:CDS
AAATGTCAATGACCCTTTCA+TGG 0.400644 5.1:-54453113 MS.gene43785:CDS
GTGCATGCATGTTGTAATTT+GGG 0.419923 5.1:+54451102 None:intergenic
AAGTGTTGCATGAGAGGAAG+AGG 0.420763 5.1:+54451289 None:intergenic
TCCATTGAAATCATGGTAAG+AGG 0.422796 5.1:-54453184 None:intergenic
ATATATCTAACCTTAATATC+AGG 0.434454 5.1:+54452481 None:intergenic
TTAAAGGAAACTAATAAAGT+TGG 0.435526 5.1:-54452602 MS.gene43785:intron
AGCTGAGAAGTTAGAAGGAA+GGG 0.452156 5.1:-54452545 MS.gene43785:CDS
TTGTATGAAGTGTAGTTCAT+TGG 0.455805 5.1:+54451202 None:intergenic
GAGATAGCAAAGAAGATTCC+AGG 0.462177 5.1:-54451485 MS.gene43785:CDS
GCAATATGGTGAAAGAAAAT+GGG 0.474578 5.1:-54452575 MS.gene43785:CDS
TTGTGCCTTAAGGATATTCA+AGG 0.475669 5.1:-54452899 MS.gene43785:CDS
TAAGGAAAGTGTTGCATGAG+AGG 0.479295 5.1:+54451283 None:intergenic
CATAACCTTGAATATCCTTA+AGG 0.482233 5.1:+54452894 None:intergenic
TGGTTGGAACCATAAGAGTA+AGG 0.488644 5.1:+54453025 None:intergenic
TGCCAAAATTGGAAACCGTT+GGG 0.495529 5.1:-54451510 MS.gene43785:CDS
GTTCCAACCATGAGTTTATG+TGG 0.505567 5.1:-54453012 MS.gene43785:CDS
ATGCCAAAATTGGAAACCGT+TGG 0.505828 5.1:-54451511 MS.gene43785:CDS
AGTTATCCTTCCCACAATGT+TGG 0.513482 5.1:+54452862 None:intergenic
GGTGAAAACACCAACATTGT+GGG 0.515105 5.1:-54452872 MS.gene43785:CDS
GGAGGAAAACATGGGGTCAA+TGG 0.516467 5.1:-54453163 MS.gene43785:CDS
AATTACAACATGCATGCACT+TGG 0.517102 5.1:-54451098 MS.gene43785:CDS
CATAAGAATCTATCCATGAA+AGG 0.517939 5.1:+54453100 None:intergenic
GAAGAATGAAACTAATTCCA+AGG 0.518190 5.1:-54451390 MS.gene43785:CDS
ATGAGAGGAAGAGGGTATGT+TGG 0.522518 5.1:+54451298 None:intergenic
ATAAGAATCTATCCATGAAA+GGG 0.524626 5.1:+54453101 None:intergenic
TGGCCACATAAACTCATGGT+TGG 0.526915 5.1:+54453009 None:intergenic
AGGAAATTATTCATAGAGGT+AGG 0.531230 5.1:+54451070 None:intergenic
TAGCTGAGAAGTTAGAAGGA+AGG 0.540309 5.1:-54452546 MS.gene43785:CDS
TGGTGAAAACACCAACATTG+TGG 0.554704 5.1:-54452873 MS.gene43785:CDS
GAGAAGTTAGAAGGAAGGGT+TGG 0.557009 5.1:-54452541 MS.gene43785:CDS
ATGGTAAGAGGAGGAAAACA+TGG 0.566719 5.1:-54453172 MS.gene43785:CDS
AGGAAGGAAATTATTCATAG+AGG 0.582868 5.1:+54451066 None:intergenic
AGTGTTGCATGAGAGGAAGA+GGG 0.587639 5.1:+54451290 None:intergenic
TATTTGGCCACATAAACTCA+TGG 0.590477 5.1:+54453005 None:intergenic
AAGAATGAAACTAATTCCAA+GGG 0.598750 5.1:-54451389 MS.gene43785:CDS
ACTTCCGAGGTCTTGATCAA+AGG 0.601817 5.1:-54452830 MS.gene43785:CDS
GGTTGGAACCATAAGAGTAA+GGG 0.602635 5.1:+54453026 None:intergenic
AGTGGACAAACGAAGAAGAC+AGG 0.603153 5.1:-54452805 MS.gene43785:intron
CAAATGAAGAGGCTTTGAAG+TGG 0.621865 5.1:-54452946 MS.gene43785:CDS
TCTTTGCTATCTCAGCCCAA+CGG 0.628371 5.1:+54451495 None:intergenic
TTCATGGATAGATTCTTATG+GGG 0.633304 5.1:-54453097 MS.gene43785:CDS
ATTGAAATCATGGTAAGAGG+AGG 0.636458 5.1:-54453181 None:intergenic
TGGTGTCTTAGCAAATGAAG+AGG 0.638115 5.1:-54452957 MS.gene43785:CDS
CTGTCCTTTGATCAAGACCT+CGG 0.642128 5.1:+54452826 None:intergenic
GCAAGCAGTGTAGAGAGCGA+TGG 0.650454 5.1:-54452519 MS.gene43785:CDS
TGGTAAGAGGAGGAAAACAT+GGG 0.651075 5.1:-54453171 MS.gene43785:CDS
AAAACACCAACATTGTGGGA+AGG 0.651290 5.1:-54452868 MS.gene43785:CDS
AATATCCTTAAGGCACAATG+TGG 0.654859 5.1:+54452904 None:intergenic
AGGTCTTGATCAAAGGACAG+TGG 0.688341 5.1:-54452823 MS.gene43785:CDS
AACTAAGAAAGAGACTTCCG+AGG 0.693403 5.1:-54452843 MS.gene43785:CDS
GGTAAGAGGAGGAAAACATG+GGG 0.754185 5.1:-54453170 MS.gene43785:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATGAAATCAAAAAAT+CGG + chr5.1:54451798-54451817 None:intergenic 10.0%
!! TAAAAATGTATGTAATTATT+TGG + chr5.1:54452572-54452591 None:intergenic 10.0%
!!! TAATACTAATTATTTTACTT+GGG - chr5.1:54452649-54452668 MS.gene43785:intron 10.0%
!! GTTAAATTCATATCTTATAT+CGG - chr5.1:54451465-54451484 MS.gene43785:CDS 15.0%
!! TGTAACTTCAAAAAAAAAAA+AGG - chr5.1:54451535-54451554 MS.gene43785:CDS 15.0%
!! TTAAATTCATATCTTATATC+GGG - chr5.1:54451466-54451485 MS.gene43785:CDS 15.0%
!!! AAAAAGTATCATTTATCAAA+GGG + chr5.1:54452251-54452270 None:intergenic 15.0%
!!! ATTTAGATTCATATTTTTCA+AGG - chr5.1:54451984-54452003 MS.gene43785:intron 15.0%
!!! ATTTTGTGCTAAATTAATAA+TGG + chr5.1:54452201-54452220 None:intergenic 15.0%
!!! CCAAATTTTAAACATTTTTA+AGG - chr5.1:54452461-54452480 MS.gene43785:intron 15.0%
!!! CCTTAAAAATGTTTAAAATT+TGG + chr5.1:54452464-54452483 None:intergenic 15.0%
!!! GTAATACTAATTATTTTACT+TGG - chr5.1:54452648-54452667 MS.gene43785:intron 15.0%
!!! TCATAGTTCTAAATAAAAAA+AGG + chr5.1:54451581-54451600 None:intergenic 15.0%
!!! TGAAAATATGTTGTTTATTT+TGG + chr5.1:54452372-54452391 None:intergenic 15.0%
!!! TTATTTGTTATGATGATTAA+AGG - chr5.1:54451630-54451649 MS.gene43785:intron 15.0%
!! AAAATGCCATAAAAAATCAT+TGG - chr5.1:54452794-54452813 MS.gene43785:intron 20.0%
!! ATATATCTAACCTTAATATC+AGG + chr5.1:54451770-54451789 None:intergenic 20.0%
!! ATGACATATTTCAAATGTTA+AGG + chr5.1:54452305-54452324 None:intergenic 20.0%
!! ATTTATGACAGAAAGATAAT+TGG - chr5.1:54452680-54452699 MS.gene43785:intron 20.0%
!! CGATTAAAAAATAGTATAAG+AGG + chr5.1:54451500-54451519 None:intergenic 20.0%
!! TTAAAGGAAACTAATAAAGT+TGG - chr5.1:54451646-54451665 MS.gene43785:intron 20.0%
!!! AAATATAAGTATTGCATATG+AGG + chr5.1:54452531-54452550 None:intergenic 20.0%
!!! ACTTTGAAATATGTTGTTTA+TGG + chr5.1:54452408-54452427 None:intergenic 20.0%
!!! CAAAAAGTATCATTTATCAA+AGG + chr5.1:54452252-54452271 None:intergenic 20.0%
!!! GATATAGTTTTCAAGTATAT+AGG + chr5.1:54452899-54452918 None:intergenic 20.0%
! AAGAATGAAACTAATTCCAA+GGG - chr5.1:54452859-54452878 MS.gene43785:CDS 25.0%
! ATAAATCATCAATCTTGATG+TGG - chr5.1:54452168-54452187 MS.gene43785:intron 25.0%
! ATAAGAATCTATCCATGAAA+GGG + chr5.1:54451150-54451169 None:intergenic 25.0%
! ATGTATGTAATTATTTGGAG+AGG + chr5.1:54452567-54452586 None:intergenic 25.0%
! GAAGGTAATTCATTGAAAAA+AGG + chr5.1:54453015-54453034 None:intergenic 25.0%
! TAAATCATCAATCTTGATGT+GGG - chr5.1:54452169-54452188 MS.gene43785:intron 25.0%
! TGAATCTAAATCTAGATCAT+CGG + chr5.1:54451975-54451994 None:intergenic 25.0%
! TTTCATGGATAGATTCTTAT+GGG - chr5.1:54451150-54451169 MS.gene43785:CDS 25.0%
!! ATAAAGTTGGTTAAGCAATA+TGG - chr5.1:54451659-54451678 MS.gene43785:intron 25.0%
!! CTTCATACAACAAATTTTGA+TGG - chr5.1:54453059-54453078 MS.gene43785:CDS 25.0%
!! TGAAATATGTCATTTGTGAT+TGG - chr5.1:54452312-54452331 MS.gene43785:intron 25.0%
!! TTGATTTTCTTCAAGGTTTA+AGG + chr5.1:54452986-54453005 None:intergenic 25.0%
!!! GATTTGATTGATTTTCTTCA+AGG + chr5.1:54452993-54453012 None:intergenic 25.0%
!!! TTTTCAAGTATATAGGACTT+AGG + chr5.1:54452892-54452911 None:intergenic 25.0%
AAGCTTGATTCTTGAGTATT+TGG + chr5.1:54451262-54451281 None:intergenic 30.0%
AGCAATATGGTGAAAGAAAA+TGG - chr5.1:54451672-54451691 MS.gene43785:intron 30.0%
ATCTAGATCATCGGATAAAT+AGG + chr5.1:54451966-54451985 None:intergenic 30.0%
CATAACCTTGAATATCCTTA+AGG + chr5.1:54451357-54451376 None:intergenic 30.0%
CATAAGAATCTATCCATGAA+AGG + chr5.1:54451151-54451170 None:intergenic 30.0%
CTTAAGGATATTCAAGGTTA+TGG - chr5.1:54451355-54451374 MS.gene43785:CDS 30.0%
CTTTCATGGATAGATTCTTA+TGG - chr5.1:54451149-54451168 MS.gene43785:CDS 30.0%
GAAGAATGAAACTAATTCCA+AGG - chr5.1:54452858-54452877 MS.gene43785:CDS 30.0%
GCAATATGGTGAAAGAAAAT+GGG - chr5.1:54451673-54451692 MS.gene43785:intron 30.0%
TATCAATCAACCTATGTATG+CGG + chr5.1:54452045-54452064 None:intergenic 30.0%
TCATTGGAAAAAGATTCAGA+AGG + chr5.1:54453033-54453052 None:intergenic 30.0%
TTCATGGATAGATTCTTATG+GGG - chr5.1:54451151-54451170 MS.gene43785:CDS 30.0%
TTCTACATAGTTGCATGTAA+TGG - chr5.1:54451885-54451904 MS.gene43785:intron 30.0%
TTGTATGAAGTGTAGTTCAT+TGG + chr5.1:54453049-54453068 None:intergenic 30.0%
! TGAATTTTGTCTCCTTTTAG+TGG + chr5.1:54452824-54452843 None:intergenic 30.0%
!! TACTTGCATTGTTTTGTTGA+TGG + chr5.1:54451198-54451217 None:intergenic 30.0%
!!! CATTGTTTTGTTGATGGTTA+GGG + chr5.1:54451192-54451211 None:intergenic 30.0%
!!! GGCATTCCAATGATTTTTTA+TGG + chr5.1:54452803-54452822 None:intergenic 30.0%
!!! GTTGGTAATTTTTGTAGTGA+TGG + chr5.1:54452935-54452954 None:intergenic 30.0%
AAATGTCAATGACCCTTTCA+TGG - chr5.1:54451135-54451154 MS.gene43785:CDS 35.0%
AATATCCTTAAGGCACAATG+TGG + chr5.1:54451347-54451366 None:intergenic 35.0%
AATTACAACATGCATGCACT+TGG - chr5.1:54453150-54453169 MS.gene43785:CDS 35.0%
AGTATGTTCCCTTACTCTTA+TGG - chr5.1:54451214-54451233 MS.gene43785:CDS 35.0%
AGTGCATGCATGTTGTAATT+TGG + chr5.1:54453150-54453169 None:intergenic 35.0%
ATCATTGGAATGCCACTAAA+AGG - chr5.1:54452809-54452828 MS.gene43785:CDS 35.0%
CAAATAGCTGAGAAGTTAGA+AGG - chr5.1:54451698-54451717 MS.gene43785:intron 35.0%
GCATGTTGTAATTTGGGTAT+TGG + chr5.1:54453143-54453162 None:intergenic 35.0%
GTCAAATTCAAGCACAAAAC+TGG + chr5.1:54451829-54451848 None:intergenic 35.0%
GTCAATGGCGTTAAAATCTT+TGG - chr5.1:54451100-54451119 MS.gene43785:CDS 35.0%
GTGCATGCATGTTGTAATTT+GGG + chr5.1:54453149-54453168 None:intergenic 35.0%
TATTTGGCCACATAAACTCA+TGG + chr5.1:54451246-54451265 None:intergenic 35.0%
TCATTTGCGTCCTGATATTA+AGG - chr5.1:54451757-54451776 MS.gene43785:intron 35.0%
TTGTGCCTTAAGGATATTCA+AGG - chr5.1:54451349-54451368 MS.gene43785:CDS 35.0%
! GGTAATTTTTGTAGTGATGG+AGG + chr5.1:54452932-54452951 None:intergenic 35.0%
! TCAAGGATCTGTGTCTTTTA+GGG - chr5.1:54452001-54452020 MS.gene43785:intron 35.0%
! TGTGCTACTATATCATCCTA+GGG + chr5.1:54451851-54451870 None:intergenic 35.0%
! TTCAAGGATCTGTGTCTTTT+AGG - chr5.1:54452000-54452019 MS.gene43785:intron 35.0%
! TTGTGCTACTATATCATCCT+AGG + chr5.1:54451852-54451871 None:intergenic 35.0%
!! AACCTTACAGCTTTAGAACT+TGG - chr5.1:54452498-54452517 MS.gene43785:CDS 35.0%
!! GAATCAAGCTTTGTTGTTGA+TGG - chr5.1:54451271-54451290 MS.gene43785:CDS 35.0%
!! TGTTTGTTATCCGCATACAT+AGG - chr5.1:54452032-54452051 MS.gene43785:intron 35.0%
!!! GCATTGTTTTGTTGATGGTT+AGG + chr5.1:54451193-54451212 None:intergenic 35.0%
AAAACACCAACATTGTGGGA+AGG - chr5.1:54451380-54451399 MS.gene43785:CDS 40.0%
AACTAAGAAAGAGACTTCCG+AGG - chr5.1:54451405-54451424 MS.gene43785:CDS 40.0%
AACTTCCACATTGTGCCTTA+AGG - chr5.1:54451339-54451358 MS.gene43785:CDS 40.0%
AGCTGAGAAGTTAGAAGGAA+GGG - chr5.1:54451703-54451722 MS.gene43785:intron 40.0%
AGTTATCCTTCCCACAATGT+TGG + chr5.1:54451389-54451408 None:intergenic 40.0%
ATGCCAAAATTGGAAACCGT+TGG - chr5.1:54452737-54452756 MS.gene43785:intron 40.0%
ATGGTAAGAGGAGGAAAACA+TGG - chr5.1:54451076-54451095 MS.gene43785:CDS 40.0%
GAGATAGCAAAGAAGATTCC+AGG - chr5.1:54452763-54452782 MS.gene43785:intron 40.0%
GGTGAAAACACCAACATTGT+GGG - chr5.1:54451376-54451395 MS.gene43785:CDS 40.0%
GGTTGGAACCATAAGAGTAA+GGG + chr5.1:54451225-54451244 None:intergenic 40.0%
GTAGCTACACATGCCAAAAT+TGG - chr5.1:54452727-54452746 MS.gene43785:intron 40.0%
GTTCCAACCATGAGTTTATG+TGG - chr5.1:54451236-54451255 MS.gene43785:CDS 40.0%
TAAGGCACAATGTGGAAGTT+TGG + chr5.1:54451339-54451358 None:intergenic 40.0%
TAGCTGAGAAGTTAGAAGGA+AGG - chr5.1:54451702-54451721 MS.gene43785:intron 40.0%
TGCCAAAATTGGAAACCGTT+GGG - chr5.1:54452738-54452757 MS.gene43785:intron 40.0%
TGGTAAGAGGAGGAAAACAT+GGG - chr5.1:54451077-54451096 MS.gene43785:CDS 40.0%
TGGTGAAAACACCAACATTG+TGG - chr5.1:54451375-54451394 MS.gene43785:CDS 40.0%
TGGTGTCTTAGCAAATGAAG+AGG - chr5.1:54451291-54451310 MS.gene43785:CDS 40.0%
TGGTTGGAACCATAAGAGTA+AGG + chr5.1:54451226-54451245 None:intergenic 40.0%
TTGTGCTTGAATTTGACCCT+AGG - chr5.1:54451832-54451851 MS.gene43785:intron 40.0%
! ATGGCATTTTCAGTTCTTCC+TGG + chr5.1:54452784-54452803 None:intergenic 40.0%
!! CAAATGAAGAGGCTTTGAAG+TGG - chr5.1:54451302-54451321 MS.gene43785:CDS 40.0%
!! TAAGGAAAGTGTTGCATGAG+AGG + chr5.1:54452968-54452987 None:intergenic 40.0%
!! TGCCAAGTTCTAAAGCTGTA+AGG + chr5.1:54452503-54452522 None:intergenic 40.0%
!! TTTTGTAGTGATGGAGGTGT+TGG + chr5.1:54452926-54452945 None:intergenic 40.0%
ACTTCCGAGGTCTTGATCAA+AGG - chr5.1:54451418-54451437 MS.gene43785:CDS 45.0%
AGGTCTTGATCAAAGGACAG+TGG - chr5.1:54451425-54451444 MS.gene43785:CDS 45.0%
AGTGGACAAACGAAGAAGAC+AGG - chr5.1:54451443-54451462 MS.gene43785:CDS 45.0%
AGTGTTGCATGAGAGGAAGA+GGG + chr5.1:54452961-54452980 None:intergenic 45.0%
CTGTCCTTTGATCAAGACCT+CGG + chr5.1:54451425-54451444 None:intergenic 45.0%
GAGAAGTTAGAAGGAAGGGT+TGG - chr5.1:54451707-54451726 MS.gene43785:intron 45.0%
GGTAAGAGGAGGAAAACATG+GGG - chr5.1:54451078-54451097 MS.gene43785:CDS 45.0%
TGGCCACATAAACTCATGGT+TGG + chr5.1:54451242-54451261 None:intergenic 45.0%
! AAGTGTTGCATGAGAGGAAG+AGG + chr5.1:54452962-54452981 None:intergenic 45.0%
! AGCCCAACGGTTTCCAATTT+TGG + chr5.1:54452743-54452762 None:intergenic 45.0%
! ATGAGAGGAAGAGGGTATGT+TGG + chr5.1:54452953-54452972 None:intergenic 45.0%
! TCTTTGCTATCTCAGCCCAA+CGG + chr5.1:54452756-54452775 None:intergenic 45.0%
!! GGACTTAGGTTTTGATCCCT+TGG + chr5.1:54452878-54452897 None:intergenic 45.0%
GGAGGAAAACATGGGGTCAA+TGG - chr5.1:54451085-54451104 MS.gene43785:CDS 50.0%
GCAAGCAGTGTAGAGAGCGA+TGG - chr5.1:54451729-54451748 MS.gene43785:intron 55.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 54451076 54453194 54451076 ID=MS.gene43785
chr5.1 mRNA 54451076 54453194 54451076 ID=MS.gene43785.t1;Parent=MS.gene43785
chr5.1 exon 54452806 54453194 54452806 ID=MS.gene43785.t1.exon1;Parent=MS.gene43785.t1
chr5.1 CDS 54452806 54453194 54452806 ID=cds.MS.gene43785.t1;Parent=MS.gene43785.t1
chr5.1 exon 54452492 54452618 54452492 ID=MS.gene43785.t1.exon2;Parent=MS.gene43785.t1
chr5.1 CDS 54452492 54452618 54452492 ID=cds.MS.gene43785.t1;Parent=MS.gene43785.t1
chr5.1 exon 54451076 54451579 54451076 ID=MS.gene43785.t1.exon3;Parent=MS.gene43785.t1
chr5.1 CDS 54451076 54451579 54451076 ID=cds.MS.gene43785.t1;Parent=MS.gene43785.t1
Gene Sequence

>MS.gene43785

ATGGTAAGAGGAGGAAAACATGGGGTCAATGGCGTTAAAATCTTTGGCAATGAAAATATAAATGTCAATGACCCTTTCATGGATAGATTCTTATGGGGTCAAATGATTCACTACCCTAACCATCAACAAAACAATGCAAGTATGTTCCCTTACTCTTATGGTTCCAACCATGAGTTTATGTGGCCAAATACTCAAGAATCAAGCTTTGTTGTTGATGGTGTCTTAGCAAATGAAGAGGCTTTGAAGTGGACTAACTTCAACCAAACTTCCACATTGTGCCTTAAGGATATTCAAGGTTATGGTGAAAACACCAACATTGTGGGAAGGATAACTAAGAAAGAGACTTCCGAGGTCTTGATCAAAGGACAGTGGACAAACGAAGAAGACAGGTTAAATTCATATCTTATATCGGGTTTGAGTACCTCTTATACTATTTTTTAATCGCATATCTATATATTTTGTAACTTCAAAAAAAAAAAAGGTTCTTTATATAGAAAAAGCTCCTTTTTTTATTTAGAACTATGATTTGTACTAAACTTTTTTATTAATGTGTTTTATTTGTTATGATGATTAAAGGAAACTAATAAAGTTGGTTAAGCAATATGGTGAAAGAAAATGGGCTCAAATAGCTGAGAAGTTAGAAGGAAGGGTTGGCAAGCAGTGTAGAGAGCGATGGCATAATCATTTGCGTCCTGATATTAAGGTTAGATATATATGTACCGATTTTTTGATTTCATATAATTTTTATTACCAGTTTTGTGCTTGAATTTGACCCTAGGATGATATAGTAGCACAACGATAAATTTTGCTTCTACATAGTTGCATGTAATGGATTTCTATTTAATTTCAACTATGTTTTTCGAGATTATTCATTGAAATAATATTTTCCTATTTATCCGATGATCTAGATTTAGATTCATATTTTTCAAGGATCTGTGTCTTTTAGGGAGAATCTATGTTTGTTATCCGCATACATAGGTTGATTGATACAGCTAGAGATCTAATTTCTTTGTTTTCTTTATAGTTTTTTTTTACAGTTATTTTCTTGTTAGTTTGTTTTCTTCTTATAGTTAGAACATATGTCTTGTTAATATAAATCATCAATCTTGATGTGGGCTTCATCCATTATTAATTTAGCACAAAATAAAAATGTAAAATTTTGTTCGAATCTACCCTTTGATAAATGATACTTTTTGTCTCTCAACAATTTTTTTGACAAAATTGTTCCTTAACATTTGAAATATGTCATTTGTGATTGGTGAAATTCAATTTTATTAATCAATTCAATTTCTTCCAAAATAAACAACATATTTTCAAGATACACAAAAACCATAAACAACATATTTCAAAGTAAGAGAACATCACTTTTCAAAAAATGTCTAAAACCAAATTTTAAACATTTTTAAGGACGAAAACATTCTTAACCTTACAGCTTTAGAACTTGGCATTGAACCTCATATGCAATACTTATATTTTTAATATTTTTTTCCTCTCCAAATAATTACATACATTTTTATTTACAGATTTTTAATTAGTTTAGTTTCAATAAAATTTTAAGTAACTTTCAAAATTGTAATACTAATTATTTTACTTGGGAAACTTATATTTATGACAGAAAGATAATTGGAGTGAAGAAGAAGAGAAGATATTAGTAGCTACACATGCCAAAATTGGAAACCGTTGGGCTGAGATAGCAAAGAAGATTCCAGGAAGAACTGAAAATGCCATAAAAAATCATTGGAATGCCACTAAAAGGAGACAAAATTCAAGAAGAAAGAACAAGAAGAATGAAACTAATTCCAAGGGATCAAAACCTAAGTCCTATATACTTGAAAACTATATCAAAACCAACACCTCCATCACTACAAAAATTACCAACATACCCTCTTCCTCTCATGCAACACTTTCCTTAAACCTTGAAGAAAATCAATCAAATCCTTTTTTCAATGAATTACCTTCTGAATCTTTTTCCAATGAACTACACTTCATACAACAAATTTTGATGGATGATAATAGTCAGAATGTTGTTGATGATGTGAATGAGAGTGAGCTTGTTCATTCAATCCAATACCCAAATTACAACATGCATGCACTTGGATACTCCTACCTCTATGAATAA
Protein sequence

>MS.gene43785.t1

MVRGGKHGVNGVKIFGNENINVNDPFMDRFLWGQMIHYPNHQQNNASMFPYSYGSNHEFMWPNTQESSFVVDGVLANEEALKWTNFNQTSTLCLKDIQGYGENTNIVGRITKKETSEVLIKGQWTNEEDRKLIKLVKQYGERKWAQIAEKLEGRVGKQCRERWHNHLRPDIKKDNWSEEEEKILVATHAKIGNRWAEIAKKIPGRTENAIKNHWNATKRRQNSRRKNKKNETNSKGSKPKSYILENYIKTNTSITTKITNIPSSSHATLSLNLEENQSNPFFNELPSESFSNELHFIQQILMDDNSQNVVDDVNESELVHSIQYPNYNMHALGYSYLYE