AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44119

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44119.t1 MTR_5g015480 89.730 185 19 0 1 185 1 185 2.45e-111 340
MS.gene44119.t1 MTR_5g015480 88.462 52 6 0 773 824 178 229 1.58e-23 101
MS.gene44119.t1 MTR_0402s0040 69.500 200 56 2 36 231 2 200 4.94e-86 283
MS.gene44119.t1 MTR_0402s0040 50.755 331 89 6 416 746 200 456 5.88e-85 280
MS.gene44119.t1 MTR_6g017200 71.074 121 31 1 36 152 34 154 4.66e-50 173
MS.gene44119.t1 MTR_2g070590 69.748 119 36 0 40 158 1 119 9.75e-50 171
MS.gene44119.t1 MTR_7g113010 56.875 160 51 2 26 181 423 568 2.37e-45 172
MS.gene44119.t1 MTR_1g057920 64.228 123 40 1 27 145 1 123 6.91e-44 154
MS.gene44119.t1 MTR_1g086270 58.400 125 36 2 351 475 1 109 3.61e-42 149
MS.gene44119.t1 MTR_6g051425 30.612 294 182 6 63 337 24 314 8.75e-42 156
MS.gene44119.t1 MTR_0558s0020 30.769 247 152 4 70 297 50 296 2.09e-34 134
MS.gene44119.t1 MTR_0137s0040 68.182 88 24 1 25 108 1 88 6.35e-34 126
MS.gene44119.t1 MTR_1g070355 30.742 283 176 7 23 293 37 311 5.06e-31 129
MS.gene44119.t1 MTR_8g446020 31.694 183 124 1 116 297 74 256 1.57e-29 118
MS.gene44119.t1 MTR_1g050985 80.000 60 12 0 126 185 39 98 7.23e-27 105
MS.gene44119.t1 MTR_6g090505 32.967 182 121 1 116 296 49 230 1.17e-26 113
MS.gene44119.t1 MTR_7g074790 42.442 172 77 5 56 226 10 160 1.61e-26 108
MS.gene44119.t1 MTR_4g035820 31.939 263 166 8 48 301 66 324 1.33e-25 113
MS.gene44119.t1 MTR_4g102720 34.524 168 74 3 56 223 7 138 1.21e-22 97.8
MS.gene44119.t1 MTR_0291s0060 63.014 73 23 1 38 106 13 85 1.72e-22 92.8
MS.gene44119.t1 MTR_5g076070 27.236 246 167 5 46 285 43 282 3.40e-22 98.2
MS.gene44119.t1 MTR_7g446520 29.796 245 154 4 59 302 91 318 6.41e-22 98.2
MS.gene44119.t1 MTR_1g083640 26.754 228 148 4 60 268 55 282 3.40e-21 95.1
MS.gene44119.t1 MTR_4g067290 46.296 108 52 3 56 161 56 159 7.39e-21 92.8
MS.gene44119.t1 MTR_4g067290 46.296 108 52 3 56 161 56 159 8.40e-21 92.8
MS.gene44119.t1 MTR_4g067290 46.296 108 52 3 56 161 76 179 1.13e-20 92.8
MS.gene44119.t1 MTR_4g067290 46.296 108 52 3 56 161 74 177 1.19e-20 92.8
MS.gene44119.t1 MTR_4g067290 46.296 108 52 3 56 161 76 179 1.33e-20 92.8
MS.gene44119.t1 MTR_4g067290 46.296 108 52 3 56 161 116 219 2.68e-20 92.8
MS.gene44119.t1 MTR_5g039760 35.714 196 96 7 60 252 14 182 2.43e-19 87.0
MS.gene44119.t1 MTR_2g098920 41.379 116 58 4 56 165 80 191 3.49e-19 88.6
MS.gene44119.t1 MTR_1g091013 67.857 56 18 0 69 124 14 69 9.19e-18 78.6
MS.gene44119.t1 MTR_6g022080 31.169 154 103 2 62 213 91 243 2.03e-17 83.2
MS.gene44119.t1 MTR_7g061980 41.176 119 66 3 50 167 4 119 1.09e-16 77.4
MS.gene44119.t1 MTR_6g022070 28.492 179 123 1 351 529 1 174 5.30e-16 80.9
MS.gene44119.t1 MTR_7g446480 32.955 176 115 3 132 305 140 314 5.41e-16 80.5
MS.gene44119.t1 MTR_0337s0040 27.703 148 106 1 116 262 75 222 2.03e-15 76.6
MS.gene44119.t1 MTR_1g008290 32.653 147 93 3 108 253 3 144 3.06e-15 73.9
MS.gene44119.t1 MTR_7g446510 32.386 176 116 3 132 305 155 329 3.81e-15 78.2
MS.gene44119.t1 MTR_3g450850 24.797 246 173 5 62 296 53 297 2.23e-14 75.9
MS.gene44119.t1 MTR_3g006370 39.048 105 62 2 56 159 50 153 9.42e-14 72.0
MS.gene44119.t1 MTR_2g099430 40.909 88 50 1 80 167 27 112 1.80e-13 68.2
MS.gene44119.t1 MTR_5g045210 38.202 89 55 0 588 676 20 108 4.81e-13 69.3
MS.gene44119.t1 MTR_1g019850 30.488 164 104 3 34 194 45 201 1.16e-12 68.9
MS.gene44119.t1 MTR_2g098880 32.414 145 92 4 42 182 59 201 1.83e-12 68.9
MS.gene44119.t1 MTR_2g014100 23.153 203 134 4 60 240 48 250 1.90e-12 68.6
MS.gene44119.t1 MTR_2g098880 32.414 145 92 4 42 182 47 189 2.08e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44119.t1 AT4G38180 34.073 631 404 7 56 677 73 700 2.02e-117 375
MS.gene44119.t1 AT4G15090 31.731 624 412 7 56 673 51 666 6.57e-102 334
MS.gene44119.t1 AT4G15090 31.731 624 412 7 56 673 51 666 6.57e-102 334
MS.gene44119.t1 AT4G15090 31.731 624 412 7 56 673 51 666 6.57e-102 334
MS.gene44119.t1 AT4G15090 31.731 624 412 7 56 673 51 666 6.57e-102 334
MS.gene44119.t1 AT4G15090 31.731 624 412 7 56 673 51 666 6.57e-102 334
MS.gene44119.t1 AT3G22170 32.310 619 370 11 56 656 70 657 1.56e-95 318
MS.gene44119.t1 AT3G22170 32.310 619 370 11 56 656 70 657 1.56e-95 318
MS.gene44119.t1 AT1G76320 31.321 613 400 12 60 668 1 596 5.90e-87 290
MS.gene44119.t1 AT1G76320 31.321 613 400 12 60 668 1 596 1.22e-86 291
MS.gene44119.t1 AT1G76320 31.321 613 400 12 60 668 1 596 1.22e-86 291
MS.gene44119.t1 AT1G76320 31.321 613 400 12 60 668 1 596 1.48e-86 291
MS.gene44119.t1 AT2G27110 30.929 624 384 14 56 669 49 635 2.02e-85 290
MS.gene44119.t1 AT2G27110 30.929 624 384 14 56 669 49 635 2.02e-85 290
MS.gene44119.t1 AT3G06250 28.140 629 394 12 47 668 181 758 5.82e-76 263
MS.gene44119.t1 AT3G06250 28.140 629 394 12 47 668 181 758 5.82e-76 263
MS.gene44119.t1 AT3G06250 28.140 629 394 12 47 668 181 758 5.82e-76 263
MS.gene44119.t1 AT2G32250 28.393 641 394 12 60 686 1 590 7.30e-75 259
MS.gene44119.t1 AT2G32250 28.393 641 394 12 60 686 42 631 9.57e-75 259
MS.gene44119.t1 AT2G32250 28.393 641 394 12 60 686 1 590 1.00e-74 259
MS.gene44119.t1 AT2G32250 28.393 641 394 12 60 686 42 631 1.10e-74 260
MS.gene44119.t1 AT2G32250 28.393 641 394 12 60 686 42 631 1.10e-74 260
MS.gene44119.t1 AT5G18960 29.245 636 386 16 44 668 200 782 1.10e-74 259
MS.gene44119.t1 AT5G18960 33.051 118 65 2 41 158 28 131 3.48e-11 67.4
MS.gene44119.t1 AT5G18960 29.245 636 386 16 44 668 200 782 1.10e-74 259
MS.gene44119.t1 AT5G18960 33.051 118 65 2 41 158 28 131 3.48e-11 67.4
MS.gene44119.t1 AT2G32250 28.393 641 394 12 60 686 42 631 1.32e-74 260
MS.gene44119.t1 AT2G32250 28.393 641 394 12 60 686 42 631 1.32e-74 260
MS.gene44119.t1 AT2G32250 28.393 641 394 12 60 686 42 631 1.32e-74 260
MS.gene44119.t1 AT1G10240 29.174 569 389 9 49 608 41 604 9.52e-74 254
MS.gene44119.t1 AT1G10240 29.174 569 389 9 49 608 41 604 9.52e-74 254
MS.gene44119.t1 AT2G27110 32.731 443 283 8 235 669 55 490 8.26e-73 253
MS.gene44119.t1 AT4G19990 28.358 670 410 13 61 702 26 653 1.99e-64 230
MS.gene44119.t1 AT4G19990 28.358 670 410 13 61 702 26 653 1.99e-64 230
MS.gene44119.t1 AT4G19990 28.209 670 411 13 61 702 26 653 2.43e-64 230
MS.gene44119.t1 AT4G19990 28.209 670 411 13 61 702 26 653 2.43e-64 230
MS.gene44119.t1 AT4G19990 28.358 670 410 13 61 702 26 653 3.15e-64 230
MS.gene44119.t1 AT4G19990 28.358 670 410 13 61 702 40 667 4.38e-64 229
MS.gene44119.t1 AT1G80010 29.372 589 361 15 56 611 95 661 2.56e-61 221
MS.gene44119.t1 AT4G38170 29.551 379 256 5 240 612 27 400 2.44e-60 214
MS.gene44119.t1 AT1G52520 27.951 576 377 14 54 611 83 638 2.94e-59 215
MS.gene44119.t1 AT5G28530 25.719 626 432 13 56 659 55 669 2.12e-58 212
MS.gene44119.t1 AT5G28530 25.949 632 419 14 56 659 55 665 2.72e-58 211
MS.gene44119.t1 AT5G28530 25.949 632 419 14 56 659 55 665 2.72e-58 211
MS.gene44119.t1 AT4G19990 27.830 636 389 13 95 702 3 596 1.82e-56 207
MS.gene44119.t1 AT5G28530 24.452 593 358 15 56 631 55 574 7.00e-36 145
MS.gene44119.t1 AT5G28530 24.361 587 370 15 56 631 55 578 7.06e-36 145
MS.gene44119.t1 AT3G59470 46.226 106 55 2 56 161 70 173 2.70e-21 94.7
MS.gene44119.t1 AT3G59470 46.226 106 55 2 56 161 70 173 2.70e-21 94.7
MS.gene44119.t1 AT3G59470 46.226 106 55 2 56 161 82 185 3.64e-21 94.7
MS.gene44119.t1 AT3G07500 38.760 129 76 2 34 160 9 136 1.73e-15 77.0
MS.gene44119.t1 AT2G43280 37.500 128 71 4 56 181 22 142 7.34e-14 71.6
MS.gene44119.t1 AT4G12850 32.540 126 78 3 56 181 11 129 3.29e-12 65.1
MS.gene44119.t1 AT2G43280 40.659 91 50 3 71 159 2 90 1.29e-11 64.3
MS.gene44119.t1 AT4G12850 34.951 103 63 2 56 158 11 109 3.97e-11 62.0

Find 138 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAAATAACAAACATATTT+TGG 0.063618 1.3:+58748008 MS.gene44119:CDS
CCATTGTCAGCTTCTGTTAA+AGG 0.115830 1.3:-58749863 None:intergenic
TCCAACTTGGCTTGAGAAAT+TGG 0.175914 1.3:+58749413 MS.gene44119:CDS
CACAGACAAACAATTGTTTA+TGG 0.199392 1.3:+58748148 MS.gene44119:CDS
ATTCATCAGCCAATACAATT+TGG 0.204201 1.3:-58747772 None:intergenic
TTGTTTGTCTGTGGCTATTA+AGG 0.204260 1.3:-58748138 None:intergenic
GCACAAATGATAAATGATTA+TGG 0.212778 1.3:+58748037 MS.gene44119:CDS
CACAATCCATGAAATGTTTC+TGG 0.237682 1.3:-58748313 None:intergenic
GAAATTTGCTTCGCACTAAA+AGG 0.249768 1.3:+58747882 MS.gene44119:CDS
GGTTGGGATGTAATCAAAAT+TGG 0.250331 1.3:+58749067 MS.gene44119:CDS
GATTGTGCACTTGGCATATA+AGG 0.257928 1.3:+58748329 MS.gene44119:CDS
TCCTAATCTCATTTGACATT+TGG 0.288109 1.3:-58749907 None:intergenic
ACAAATTCATGAAAATCTTT+TGG 0.298226 1.3:-58747806 None:intergenic
ATTGTATTGGCTGATGAATC+TGG 0.322531 1.3:+58747776 MS.gene44119:CDS
CATTTCATGGATTGTGCACT+TGG 0.334162 1.3:+58748320 MS.gene44119:CDS
TCTTGTAGTGTAAACATTGC+CGG 0.345114 1.3:-58748776 None:intergenic
TAGTGCGAAGCAAATTTCTA+TGG 0.349224 1.3:-58747877 None:intergenic
GCTTGGAATGGAAGCCAATC+TGG 0.361798 1.3:+58749785 MS.gene44119:CDS
GACATTCCTCATATTCATCT+TGG 0.362108 1.3:-58748813 None:intergenic
ACAGACAAACAATTGTTTAT+GGG 0.367661 1.3:+58748149 MS.gene44119:CDS
TATAGTAGGAAATGTGGTTT+TGG 0.369598 1.3:+58747458 MS.gene44119:CDS
CGTCCGTTGGGAGTATTTGT+TGG 0.371935 1.3:+58748115 MS.gene44119:CDS
TAGATGATTCACATGCCTTA+TGG 0.372601 1.3:-58748359 None:intergenic
TTCATCAGCCAATACAATTT+GGG 0.375471 1.3:-58747771 None:intergenic
GAAAGGGGAACATATTGAAT+TGG 0.379587 1.3:+58749089 MS.gene44119:CDS
TCAAATAACCATTGAAAAGA+AGG 0.380370 1.3:-58748199 None:intergenic
GGTGAATGATATCGTGCAAC+AGG 0.381657 1.3:+58747352 MS.gene44119:CDS
TCACCATTCATCACCACCTC+TGG 0.385515 1.3:+58747136 MS.gene44119:CDS
CCCACCCATTGCTTTGAGAA+AGG 0.392844 1.3:-58748224 None:intergenic
ATGAGACTCTTCATAAACTT+TGG 0.394637 1.3:-58749214 None:intergenic
ATTTCACTTGATCGGAAGAT+TGG 0.399360 1.3:+58747641 MS.gene44119:CDS
GTCATGCCAGAAACATTTCA+TGG 0.400517 1.3:+58748307 MS.gene44119:CDS
GACACCGCGTCTACCCTCTT+TGG 0.402002 1.3:-58747549 None:intergenic
CATCCCAACCTTGCATCTCT+TGG 0.405348 1.3:-58749054 None:intergenic
CACAAATGATAAATGATTAT+GGG 0.407470 1.3:+58748038 MS.gene44119:CDS
TAATGTACCACACTTGGAAA+TGG 0.430430 1.3:+58747394 MS.gene44119:CDS
TCCAAGCATGTATGCCATCA+TGG 0.434387 1.3:-58749769 None:intergenic
ATATGGAAGCCATGCTTTGA+TGG 0.436030 1.3:+58749808 MS.gene44119:CDS
TACACCTTCAACCATTGGAT+TGG 0.436578 1.3:-58747321 None:intergenic
AATGGAAGCCAATCTGGATA+TGG 0.437868 1.3:+58749791 MS.gene44119:CDS
ATCATTTATCATTTGTGCAT+CGG 0.444064 1.3:-58748032 None:intergenic
ACGTGTGTCGTTTCTACCAT+TGG 0.448381 1.3:-58747095 None:intergenic
TGTTTAAGAAATTTGAAAGA+AGG 0.449252 1.3:+58748844 MS.gene44119:CDS
TCCAATTTCTCAAGCCAAGT+TGG 0.453093 1.3:-58749414 None:intergenic
GAAACCTTTCTCAAAGCAAT+GGG 0.457265 1.3:+58748220 MS.gene44119:CDS
TGTGTACCATCATTGTTTGC+AGG 0.460822 1.3:-58749589 None:intergenic
AGAGCCGAGATTGCTTAGAT+AGG 0.461774 1.3:+58749376 MS.gene44119:CDS
CATGGCTTCCATATCCAGAT+TGG 0.462462 1.3:-58749799 None:intergenic
AACAGGATGTTTAGCACGTA+TGG 0.468473 1.3:+58747616 MS.gene44119:CDS
TGCATCTTGATCTGTTAGAA+TGG 0.469730 1.3:-58748260 None:intergenic
GGAGTTTGAGTCTGAGGCCT+TGG 0.475074 1.3:+58747415 MS.gene44119:CDS
TGAAACCTTTCTCAAAGCAA+TGG 0.476564 1.3:+58748219 MS.gene44119:CDS
ATGGAAGTCTACATGAGATT+AGG 0.477147 1.3:+58749882 MS.gene44119:CDS
TTGCTCAATTTAACTGCTTG+AGG 0.481137 1.3:-58749153 None:intergenic
GTTTAAGAAATTTGAAAGAA+GGG 0.482494 1.3:+58748845 MS.gene44119:CDS
ATAAATGATTATGGGTACTT+TGG 0.482723 1.3:+58748046 MS.gene44119:CDS
GGAATTCCAAGATGAATATG+AGG 0.483458 1.3:+58748807 MS.gene44119:CDS
AATAAGAATTATCGTCCGTT+GGG 0.484650 1.3:+58748103 MS.gene44119:CDS
TCCAAATGTCAAATGAGATT+AGG 0.485144 1.3:+58749906 MS.gene44119:CDS
CCCATGATGGCATACATGCT+TGG 0.488076 1.3:+58749768 MS.gene44119:CDS
GTGGACACTGTTGATCTTGG+TGG 0.493561 1.3:+58749339 MS.gene44119:CDS
CAAATAACCATTGAAAAGAA+GGG 0.495588 1.3:-58748198 None:intergenic
ACAAGCATCCCAAATTGTAT+TGG 0.495869 1.3:+58747763 MS.gene44119:CDS
GATGTAATCAAAATTGGAAA+GGG 0.496181 1.3:+58749073 MS.gene44119:CDS
TCACTAAGGTATGGTGAAGT+AGG 0.507546 1.3:+58747911 MS.gene44119:CDS
TCTATGGATGGAGAGTCAAT+TGG 0.511024 1.3:+58749267 MS.gene44119:CDS
TGGCCAAGAGATGCAAGGTT+GGG 0.516109 1.3:+58749051 MS.gene44119:CDS
GATGGTACACATGCTTTGAA+TGG 0.516924 1.3:+58749601 MS.gene44119:CDS
TTGCCGGCTTGTACAAGCAT+AGG 0.519591 1.3:-58748760 None:intergenic
ATCCCTATGCTTGTACAAGC+CGG 0.521377 1.3:+58748757 MS.gene44119:CDS
ATTGTGCACTTGGCATATAA+GGG 0.522000 1.3:+58748330 MS.gene44119:CDS
ATCATATAAACATACTCAGC+TGG 0.522562 1.3:-58747713 None:intergenic
GATAGTAGTAGCGAATCATA+TGG 0.523742 1.3:+58748906 MS.gene44119:CDS
CATACTCAGCTGGCAGAAGA+AGG 0.525063 1.3:-58747703 None:intergenic
AAATAAGAATTATCGTCCGT+TGG 0.526037 1.3:+58748102 MS.gene44119:CDS
TGAAACTCATAAAAGAATGA+AGG 0.528219 1.3:-58747971 None:intergenic
CACCATTCATCACCACCTCT+GGG 0.529997 1.3:+58747137 MS.gene44119:CDS
TAGTCCTATCTAAGCAATCT+CGG 0.530700 1.3:-58749380 None:intergenic
ACATCCAATCCAATGGTTGA+AGG 0.531051 1.3:+58747317 MS.gene44119:CDS
GTATGGTTATTTCACTTGAT+CGG 0.532614 1.3:+58747633 MS.gene44119:CDS
GCTCGAGCAGAAACTAGAAC+AGG 0.536024 1.3:+58747599 MS.gene44119:CDS
TTGGCCAAGAGATGCAAGGT+TGG 0.536626 1.3:+58749050 MS.gene44119:CDS
AATGTGGACACTGTTGATCT+TGG 0.536764 1.3:+58749336 MS.gene44119:CDS
CAATCTCCTGCAAACAATGA+TGG 0.539918 1.3:+58749583 MS.gene44119:CDS
TGTATGCCATCATGGGTTGC+TGG 0.540590 1.3:-58749761 None:intergenic
TCAAGATGCAGCAATGGCTA+AGG 0.541612 1.3:+58748273 MS.gene44119:CDS
ACGTGATTACTTAACAAAAG+AGG 0.543276 1.3:+58747577 MS.gene44119:CDS
CTAAAAGGAACCACTCACTA+AGG 0.543419 1.3:+58747897 MS.gene44119:CDS
CAATCTCCAGCAACCCATGA+TGG 0.544924 1.3:+58749755 MS.gene44119:CDS
TGCCCAGAGGTGGTGATGAA+TGG 0.545146 1.3:-58747139 None:intergenic
GTACACATGCTTTGAATGGA+AGG 0.545764 1.3:+58749605 MS.gene44119:CDS
CAGACAAACAATTGTTTATG+GGG 0.545894 1.3:+58748150 MS.gene44119:CDS
ATAATGTTTCTAAAGACTCA+TGG 0.548211 1.3:+58748485 MS.gene44119:CDS
CCAAGCATGTATGCCATCAT+GGG 0.548509 1.3:-58749768 None:intergenic
GGAAATGGAGTTTGAGTCTG+AGG 0.549669 1.3:+58747409 MS.gene44119:CDS
AATGAGTATAGTAGGAAATG+TGG 0.549866 1.3:+58747452 MS.gene44119:CDS
ACCTTTCTCAAAGCAATGGG+TGG 0.552305 1.3:+58748223 MS.gene44119:CDS
GGATGTAATCAAAATTGGAA+AGG 0.552421 1.3:+58749072 MS.gene44119:CDS
TCGGAAGATTGGAAAATACA+AGG 0.556421 1.3:+58747652 MS.gene44119:CDS
TGGACACTGTTGATCTTGGT+GGG 0.560318 1.3:+58749340 MS.gene44119:CDS
TGTTAGTAATGTACCACACT+TGG 0.560348 1.3:+58747388 MS.gene44119:CDS
ATCTTACCGGTGCCCAGAGG+TGG 0.565589 1.3:-58747149 None:intergenic
ATTATAAAATTCATATGCCA+AGG 0.568982 1.3:-58747432 None:intergenic
AGCAATATATACTAAAACGT+TGG 0.571514 1.3:+58749031 MS.gene44119:CDS
AACAGATCAAGATGCAGCAA+TGG 0.573110 1.3:+58748267 MS.gene44119:CDS
ATTCTTATTTGTCTTGAATG+TGG 0.574010 1.3:-58748089 None:intergenic
TGCCGGCTTGTACAAGCATA+GGG 0.574909 1.3:-58748759 None:intergenic
AGGAACCACTCACTAAGGTA+TGG 0.576328 1.3:+58747902 MS.gene44119:CDS
GTGCGAAAGACTTTCACTGC+AGG 0.578283 1.3:+58748553 MS.gene44119:CDS
TGTCGAAAGTTTGAGACACA+TGG 0.578537 1.3:+58748949 MS.gene44119:CDS
TTTGAGATGCCATCAAAGCA+TGG 0.583887 1.3:-58749817 None:intergenic
CATAAACAATTGTTTGTCTG+TGG 0.584673 1.3:-58748147 None:intergenic
AAAGAGTTGTCAACGGAAAG+CGG 0.589356 1.3:+58748671 MS.gene44119:CDS
AAAATTTGTGTGCTCCAAAG+AGG 0.589431 1.3:+58747535 MS.gene44119:CDS
ATATAAGGGAAAATGCCATA+AGG 0.594748 1.3:+58748344 MS.gene44119:CDS
TCATCACCACCTCTGGGCAC+CGG 0.597509 1.3:+58747143 MS.gene44119:CDS
GATGGCATACATGCTTGGAA+TGG 0.609086 1.3:+58749773 MS.gene44119:CDS
CACTTTGAAAGAGTTGTCAA+CGG 0.610932 1.3:+58748664 MS.gene44119:CDS
CCTTTAACAGAAGCTGACAA+TGG 0.612454 1.3:+58749863 MS.gene44119:CDS
CCTTTCTCAAAGCAATGGGT+GGG 0.612770 1.3:+58748224 MS.gene44119:CDS
ATGTAATCAAAATTGGAAAG+GGG 0.613707 1.3:+58749074 MS.gene44119:CDS
ATGCATTGATCTACACGAAG+AGG 0.614015 1.3:+58748420 MS.gene44119:CDS
GAATATTACATCCAATCCAA+TGG 0.614280 1.3:+58747310 MS.gene44119:CDS
AAATTTGTGTGCTCCAAAGA+GGG 0.614397 1.3:+58747536 MS.gene44119:CDS
GAATTTGTGTCAAAACAAGC+TGG 0.617409 1.3:+58747821 MS.gene44119:CDS
AACGTTGGCCAAGAGATGCA+AGG 0.619456 1.3:+58749046 MS.gene44119:CDS
CAAGGTTATTGACTTTGTAG+CGG 0.620198 1.3:+58747670 MS.gene44119:CDS
CTTCACCATACCTTAGTGAG+TGG 0.628280 1.3:-58747907 None:intergenic
TACAAATTATGATAACAGCA+AGG 0.637062 1.3:+58748879 MS.gene44119:CDS
GCTGGTGGAATAAACACTGT+TGG 0.638577 1.3:+58747839 MS.gene44119:CDS
TCAAACTCCATTTCCAAGTG+TGG 0.642402 1.3:-58747401 None:intergenic
TTTGTGTCAAAACAAGCTGG+TGG 0.647892 1.3:+58747824 MS.gene44119:CDS
AGGCCAACAAATACTCCCAA+CGG 0.650363 1.3:-58748118 None:intergenic
TGCTCCAAAGAGGGTAGACG+CGG 0.660484 1.3:+58747545 MS.gene44119:CDS
GTGAATGATATCGTGCAACA+GGG 0.667513 1.3:+58747353 MS.gene44119:CDS
GGACACTGTTGATCTTGGTG+GGG 0.681245 1.3:+58749341 MS.gene44119:CDS
ATTATGATAACAGCAAGGAG+CGG 0.694152 1.3:+58748884 MS.gene44119:CDS
AAAATCTTACCGGTGCCCAG+AGG 0.742952 1.3:-58747152 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATAATGAGTATAGT+AGG + chr1.3:58747444-58747463 MS.gene44119:CDS 15.0%
!! ATCAATTGCAAATGAAAAAA+AGG + chr1.3:58749308-58749327 MS.gene44119:CDS 20.0%
!! ATTATAAAATTCATATGCCA+AGG - chr1.3:58747435-58747454 None:intergenic 20.0%
!! CACAAATGATAAATGATTAT+GGG + chr1.3:58748038-58748057 MS.gene44119:CDS 20.0%
!! GTTTAAGAAATTTGAAAGAA+GGG + chr1.3:58748845-58748864 MS.gene44119:CDS 20.0%
!! TATTCACATTATCTAGAAAA+TGG - chr1.3:58747295-58747314 None:intergenic 20.0%
!! TGTTTAAGAAATTTGAAAGA+AGG + chr1.3:58748844-58748863 MS.gene44119:CDS 20.0%
!!! ACAAATTCATGAAAATCTTT+TGG - chr1.3:58747809-58747828 None:intergenic 20.0%
!!! AGCAAATAACAAACATATTT+TGG + chr1.3:58748008-58748027 MS.gene44119:CDS 20.0%
!!! ATCTTTTTCATTTTCAATCT+TGG - chr1.3:58748739-58748758 None:intergenic 20.0%
!!! CATGAATATTTGAAAGTATT+TGG + chr1.3:58747206-58747225 MS.gene44119:intron 20.0%
!!! GCAAATAACAAACATATTTT+GGG + chr1.3:58748009-58748028 MS.gene44119:CDS 20.0%
!!! TATTACTTTTACTACTATGT+AGG + chr1.3:58749558-58749577 MS.gene44119:intron 20.0%
! AAGGAAGAGAAAGAAAAAAT+TGG + chr1.3:58749624-58749643 MS.gene44119:CDS 25.0%
! ACAGACAAACAATTGTTTAT+GGG + chr1.3:58748149-58748168 MS.gene44119:CDS 25.0%
! AGCAATATATACTAAAACGT+TGG + chr1.3:58749031-58749050 MS.gene44119:CDS 25.0%
! ATAAATGATTATGGGTACTT+TGG + chr1.3:58748046-58748065 MS.gene44119:CDS 25.0%
! ATCATTTATCATTTGTGCAT+CGG - chr1.3:58748035-58748054 None:intergenic 25.0%
! ATGTAATCAAAATTGGAAAG+GGG + chr1.3:58749074-58749093 MS.gene44119:CDS 25.0%
! CAAATAACCATTGAAAAGAA+GGG - chr1.3:58748201-58748220 None:intergenic 25.0%
! CACATGTTAAAAAGAAAGTA+TGG - chr1.3:58749499-58749518 None:intergenic 25.0%
! CCTTGAATCGAAAAATATTA+TGG - chr1.3:58748513-58748532 None:intergenic 25.0%
! GACTAAGAGAAAGAAAAAAT+TGG + chr1.3:58749464-58749483 MS.gene44119:CDS 25.0%
! GATGTAATCAAAATTGGAAA+GGG + chr1.3:58749073-58749092 MS.gene44119:CDS 25.0%
! GCAAATAAAAGCAAAAAAGA+TGG + chr1.3:58747497-58747516 MS.gene44119:CDS 25.0%
! GCACAAATGATAAATGATTA+TGG + chr1.3:58748037-58748056 MS.gene44119:CDS 25.0%
! TACAAATTATGATAACAGCA+AGG + chr1.3:58748879-58748898 MS.gene44119:CDS 25.0%
! TCAAATAACCATTGAAAAGA+AGG - chr1.3:58748202-58748221 None:intergenic 25.0%
! TGAAACTCATAAAAGAATGA+AGG - chr1.3:58747974-58747993 None:intergenic 25.0%
! TGGATAAAAAGAGACAAAAA+AGG + chr1.3:58749433-58749452 MS.gene44119:CDS 25.0%
!! ATAATGTTTCTAAAGACTCA+TGG + chr1.3:58748485-58748504 MS.gene44119:CDS 25.0%
!! ATTCTTATTTGTCTTGAATG+TGG - chr1.3:58748092-58748111 None:intergenic 25.0%
!! ATTCTTTTATGAGTTTCAGA+TGG + chr1.3:58747976-58747995 MS.gene44119:CDS 25.0%
!! TGTTACTTCTACTATTATGT+AGG + chr1.3:58749730-58749749 MS.gene44119:intron 25.0%
!! TTACACTACAAGAATTTTTG+AGG + chr1.3:58748786-58748805 MS.gene44119:CDS 25.0%
!! TTTTCGATTCAAGGAAAAAT+GGG + chr1.3:58748519-58748538 MS.gene44119:CDS 25.0%
!!! CCATAATATTTTTCGATTCA+AGG + chr1.3:58748510-58748529 MS.gene44119:CDS 25.0%
!!! TTTTATTTGCATATTCTCGA+CGG - chr1.3:58747487-58747506 None:intergenic 25.0%
!!! TTTTTCGATTCAAGGAAAAA+TGG + chr1.3:58748518-58748537 MS.gene44119:CDS 25.0%
AAATAAGAATTATCGTCCGT+TGG + chr1.3:58748102-58748121 MS.gene44119:CDS 30.0%
AATAAGAATTATCGTCCGTT+GGG + chr1.3:58748103-58748122 MS.gene44119:CDS 30.0%
AATGAGTATAGTAGGAAATG+TGG + chr1.3:58747452-58747471 MS.gene44119:CDS 30.0%
ACGTGATTACTTAACAAAAG+AGG + chr1.3:58747577-58747596 MS.gene44119:CDS 30.0%
ATATAAGGGAAAATGCCATA+AGG + chr1.3:58748344-58748363 MS.gene44119:CDS 30.0%
ATCATATAAACATACTCAGC+TGG - chr1.3:58747716-58747735 None:intergenic 30.0%
ATGAGACTCTTCATAAACTT+TGG - chr1.3:58749217-58749236 None:intergenic 30.0%
ATTCATCAGCCAATACAATT+TGG - chr1.3:58747775-58747794 None:intergenic 30.0%
CACAGACAAACAATTGTTTA+TGG + chr1.3:58748148-58748167 MS.gene44119:CDS 30.0%
CAGACAAACAATTGTTTATG+GGG + chr1.3:58748150-58748169 MS.gene44119:CDS 30.0%
CATAAACAATTGTTTGTCTG+TGG - chr1.3:58748150-58748169 None:intergenic 30.0%
GAATATTACATCCAATCCAA+TGG + chr1.3:58747310-58747329 MS.gene44119:CDS 30.0%
GACAAAGAACAAAATCTTAC+CGG - chr1.3:58747165-58747184 None:intergenic 30.0%
GATAGCAGTACTAAAATTCT+AGG - chr1.3:58749522-58749541 None:intergenic 30.0%
GCTTAGATAGGACTAAAAAA+AGG + chr1.3:58749388-58749407 MS.gene44119:CDS 30.0%
GGATGTAATCAAAATTGGAA+AGG + chr1.3:58749072-58749091 MS.gene44119:CDS 30.0%
TCCAAATGTCAAATGAGATT+AGG + chr1.3:58749906-58749925 MS.gene44119:CDS 30.0%
TCCTAATCTCATTTGACATT+TGG - chr1.3:58749910-58749929 None:intergenic 30.0%
TGAAAAAAAGGATCAGAATG+TGG + chr1.3:58749320-58749339 MS.gene44119:CDS 30.0%
TTCATCAGCCAATACAATTT+GGG - chr1.3:58747774-58747793 None:intergenic 30.0%
! AAACAATCCCTTCTTTTCAA+TGG + chr1.3:58748191-58748210 MS.gene44119:CDS 30.0%
! GTATGGTTATTTCACTTGAT+CGG + chr1.3:58747633-58747652 MS.gene44119:CDS 30.0%
! TATAGTAGGAAATGTGGTTT+TGG + chr1.3:58747458-58747477 MS.gene44119:CDS 30.0%
! TATGCTGACTAAAAAGTCTA+TGG + chr1.3:58749251-58749270 MS.gene44119:CDS 30.0%
! TGATCTGTTAGAATGGTTTT+AGG - chr1.3:58748256-58748275 None:intergenic 30.0%
!! CGTTTTAGTATATATTGCTG+AGG - chr1.3:58749030-58749049 None:intergenic 30.0%
!!! AAGAAGAATTTTTGAGTGGA+TGG + chr1.3:58748443-58748462 MS.gene44119:CDS 30.0%
!!! AGAAGAATTTTTGAGTGGAT+GGG + chr1.3:58748444-58748463 MS.gene44119:CDS 30.0%
AAAATTTGTGTGCTCCAAAG+AGG + chr1.3:58747535-58747554 MS.gene44119:CDS 35.0%
AAATTTGTGTGCTCCAAAGA+GGG + chr1.3:58747536-58747555 MS.gene44119:CDS 35.0%
ACAAGCATCCCAAATTGTAT+TGG + chr1.3:58747763-58747782 MS.gene44119:CDS 35.0%
ATGGAAGTCTACATGAGATT+AGG + chr1.3:58749882-58749901 MS.gene44119:CDS 35.0%
ATTATGATAACAGCAAGGAG+CGG + chr1.3:58748884-58748903 MS.gene44119:CDS 35.0%
ATTCAAGGAAAAATGGGCAT+GGG + chr1.3:58748525-58748544 MS.gene44119:CDS 35.0%
ATTGTGCACTTGGCATATAA+GGG + chr1.3:58748330-58748349 MS.gene44119:CDS 35.0%
ATTTCACTTGATCGGAAGAT+TGG + chr1.3:58747641-58747660 MS.gene44119:CDS 35.0%
CACAATCCATGAAATGTTTC+TGG - chr1.3:58748316-58748335 None:intergenic 35.0%
CTGACTAAAAAGTCTATGGA+TGG + chr1.3:58749255-58749274 MS.gene44119:CDS 35.0%
GAAACCTTTCTCAAAGCAAT+GGG + chr1.3:58748220-58748239 MS.gene44119:CDS 35.0%
GAAAGGGGAACATATTGAAT+TGG + chr1.3:58749089-58749108 MS.gene44119:CDS 35.0%
GAATTTGTGTCAAAACAAGC+TGG + chr1.3:58747821-58747840 MS.gene44119:CDS 35.0%
GACATTCCTCATATTCATCT+TGG - chr1.3:58748816-58748835 None:intergenic 35.0%
GATAGTAGTAGCGAATCATA+TGG + chr1.3:58748906-58748925 MS.gene44119:CDS 35.0%
GGAATTCCAAGATGAATATG+AGG + chr1.3:58748807-58748826 MS.gene44119:CDS 35.0%
GGTTGGGATGTAATCAAAAT+TGG + chr1.3:58749067-58749086 MS.gene44119:CDS 35.0%
TAATGTACCACACTTGGAAA+TGG + chr1.3:58747394-58747413 MS.gene44119:CDS 35.0%
TAGATGATTCACATGCCTTA+TGG - chr1.3:58748362-58748381 None:intergenic 35.0%
TAGTCCTATCTAAGCAATCT+CGG - chr1.3:58749383-58749402 None:intergenic 35.0%
TAGTGCGAAGCAAATTTCTA+TGG - chr1.3:58747880-58747899 None:intergenic 35.0%
TCGGAAGATTGGAAAATACA+AGG + chr1.3:58747652-58747671 MS.gene44119:CDS 35.0%
TCTTGTAGTGTAAACATTGC+CGG - chr1.3:58748779-58748798 None:intergenic 35.0%
TGAAACCTTTCTCAAAGCAA+TGG + chr1.3:58748219-58748238 MS.gene44119:CDS 35.0%
TGCATCTTGATCTGTTAGAA+TGG - chr1.3:58748263-58748282 None:intergenic 35.0%
TGTTAGTAATGTACCACACT+TGG + chr1.3:58747388-58747407 MS.gene44119:CDS 35.0%
TTGCTCAATTTAACTGCTTG+AGG - chr1.3:58749156-58749175 None:intergenic 35.0%
TTGTTTGTCTGTGGCTATTA+AGG - chr1.3:58748141-58748160 None:intergenic 35.0%
! CACTTTGAAAGAGTTGTCAA+CGG + chr1.3:58748664-58748683 MS.gene44119:CDS 35.0%
! GAAATTTGCTTCGCACTAAA+AGG + chr1.3:58747882-58747901 MS.gene44119:CDS 35.0%
! GGTTGAAGGTGTAGAAAAAT+TGG + chr1.3:58747331-58747350 MS.gene44119:CDS 35.0%
! TTTTCTACACCTTCAACCAT+TGG - chr1.3:58747329-58747348 None:intergenic 35.0%
!! ATTGTATTGGCTGATGAATC+TGG + chr1.3:58747776-58747795 MS.gene44119:CDS 35.0%
!! CAAGGTTATTGACTTTGTAG+CGG + chr1.3:58747670-58747689 MS.gene44119:CDS 35.0%
!! CTAAAAAAAGGCATCCAACT+TGG + chr1.3:58749400-58749419 MS.gene44119:CDS 35.0%
!! GAGGAAGAAGAATTTTTGAG+TGG + chr1.3:58748439-58748458 MS.gene44119:CDS 35.0%
AAAGAGTTGTCAACGGAAAG+CGG + chr1.3:58748671-58748690 MS.gene44119:CDS 40.0%
AACAGATCAAGATGCAGCAA+TGG + chr1.3:58748267-58748286 MS.gene44119:CDS 40.0%
AACAGGATGTTTAGCACGTA+TGG + chr1.3:58747616-58747635 MS.gene44119:CDS 40.0%
AATGGAAGCCAATCTGGATA+TGG + chr1.3:58749791-58749810 MS.gene44119:CDS 40.0%
AATGTGGACACTGTTGATCT+TGG + chr1.3:58749336-58749355 MS.gene44119:CDS 40.0%
ACATCCAATCCAATGGTTGA+AGG + chr1.3:58747317-58747336 MS.gene44119:CDS 40.0%
ATATGGAAGCCATGCTTTGA+TGG + chr1.3:58749808-58749827 MS.gene44119:CDS 40.0%
CAATCTCCTGCAAACAATGA+TGG + chr1.3:58749583-58749602 MS.gene44119:CDS 40.0%
CCATTGTCAGCTTCTGTTAA+AGG - chr1.3:58749866-58749885 None:intergenic 40.0%
CCTTTAACAGAAGCTGACAA+TGG + chr1.3:58749863-58749882 MS.gene44119:CDS 40.0%
CTAAAAGGAACCACTCACTA+AGG + chr1.3:58747897-58747916 MS.gene44119:CDS 40.0%
GATTCAAGGAAAAATGGGCA+TGG + chr1.3:58748524-58748543 MS.gene44119:CDS 40.0%
GATTGTGCACTTGGCATATA+AGG + chr1.3:58748329-58748348 MS.gene44119:CDS 40.0%
GTCATGCCAGAAACATTTCA+TGG + chr1.3:58748307-58748326 MS.gene44119:CDS 40.0%
GTGAATGATATCGTGCAACA+GGG + chr1.3:58747353-58747372 MS.gene44119:CDS 40.0%
TACACCTTCAACCATTGGAT+TGG - chr1.3:58747324-58747343 None:intergenic 40.0%
TCAAACTCCATTTCCAAGTG+TGG - chr1.3:58747404-58747423 None:intergenic 40.0%
TCACTAAGGTATGGTGAAGT+AGG + chr1.3:58747911-58747930 MS.gene44119:CDS 40.0%
TCCAATTTCTCAAGCCAAGT+TGG - chr1.3:58749417-58749436 None:intergenic 40.0%
TCTATGGATGGAGAGTCAAT+TGG + chr1.3:58749267-58749286 MS.gene44119:CDS 40.0%
TGTGTACCATCATTGTTTGC+AGG - chr1.3:58749592-58749611 None:intergenic 40.0%
TTTGTGTCAAAACAAGCTGG+TGG + chr1.3:58747824-58747843 MS.gene44119:CDS 40.0%
! ATGCATTGATCTACACGAAG+AGG + chr1.3:58748420-58748439 MS.gene44119:CDS 40.0%
! CATTTCATGGATTGTGCACT+TGG + chr1.3:58748320-58748339 MS.gene44119:CDS 40.0%
! GATGGTACACATGCTTTGAA+TGG + chr1.3:58749601-58749620 MS.gene44119:CDS 40.0%
! GTACACATGCTTTGAATGGA+AGG + chr1.3:58749605-58749624 MS.gene44119:CDS 40.0%
! TCCAACTTGGCTTGAGAAAT+TGG + chr1.3:58749413-58749432 MS.gene44119:CDS 40.0%
! TGTCGAAAGTTTGAGACACA+TGG + chr1.3:58748949-58748968 MS.gene44119:CDS 40.0%
! TTTGAGATGCCATCAAAGCA+TGG - chr1.3:58749820-58749839 None:intergenic 40.0%
!!! AGAATTTTTGAGTGGATGGG+AGG + chr1.3:58748447-58748466 MS.gene44119:CDS 40.0%
ACCTTTCTCAAAGCAATGGG+TGG + chr1.3:58748223-58748242 MS.gene44119:CDS 45.0%
AGAGCCGAGATTGCTTAGAT+AGG + chr1.3:58749376-58749395 MS.gene44119:CDS 45.0%
AGGAACCACTCACTAAGGTA+TGG + chr1.3:58747902-58747921 MS.gene44119:CDS 45.0%
AGGCCAACAAATACTCCCAA+CGG - chr1.3:58748121-58748140 None:intergenic 45.0%
ATCCCTATGCTTGTACAAGC+CGG + chr1.3:58748757-58748776 MS.gene44119:CDS 45.0%
CATGGCTTCCATATCCAGAT+TGG - chr1.3:58749802-58749821 None:intergenic 45.0%
CCAAGCATGTATGCCATCAT+GGG - chr1.3:58749771-58749790 None:intergenic 45.0%
CCTTTCTCAAAGCAATGGGT+GGG + chr1.3:58748224-58748243 MS.gene44119:CDS 45.0%
CTTCACCATACCTTAGTGAG+TGG - chr1.3:58747910-58747929 None:intergenic 45.0%
GATGGCATACATGCTTGGAA+TGG + chr1.3:58749773-58749792 MS.gene44119:CDS 45.0%
GCTGGTGGAATAAACACTGT+TGG + chr1.3:58747839-58747858 MS.gene44119:CDS 45.0%
GGAAATGGAGTTTGAGTCTG+AGG + chr1.3:58747409-58747428 MS.gene44119:CDS 45.0%
GGTGAATGATATCGTGCAAC+AGG + chr1.3:58747352-58747371 MS.gene44119:CDS 45.0%
TCAAGATGCAGCAATGGCTA+AGG + chr1.3:58748273-58748292 MS.gene44119:CDS 45.0%
TCCAAGCATGTATGCCATCA+TGG - chr1.3:58749772-58749791 None:intergenic 45.0%
TGGACACTGTTGATCTTGGT+GGG + chr1.3:58749340-58749359 MS.gene44119:CDS 45.0%
AAAATCTTACCGGTGCCCAG+AGG - chr1.3:58747155-58747174 None:intergenic 50.0%
AACGTTGGCCAAGAGATGCA+AGG + chr1.3:58749046-58749065 MS.gene44119:CDS 50.0%
CAATCTCCAGCAACCCATGA+TGG + chr1.3:58749755-58749774 MS.gene44119:CDS 50.0%
CACCATTCATCACCACCTCT+GGG + chr1.3:58747137-58747156 MS.gene44119:CDS 50.0%
CATACTCAGCTGGCAGAAGA+AGG - chr1.3:58747706-58747725 None:intergenic 50.0%
CATCCCAACCTTGCATCTCT+TGG - chr1.3:58749057-58749076 None:intergenic 50.0%
CCCATGATGGCATACATGCT+TGG + chr1.3:58749768-58749787 MS.gene44119:CDS 50.0%
GCTCGAGCAGAAACTAGAAC+AGG + chr1.3:58747599-58747618 MS.gene44119:CDS 50.0%
GCTTGGAATGGAAGCCAATC+TGG + chr1.3:58749785-58749804 MS.gene44119:CDS 50.0%
GGACACTGTTGATCTTGGTG+GGG + chr1.3:58749341-58749360 MS.gene44119:CDS 50.0%
GTGCGAAAGACTTTCACTGC+AGG + chr1.3:58748553-58748572 MS.gene44119:CDS 50.0%
GTGGACACTGTTGATCTTGG+TGG + chr1.3:58749339-58749358 MS.gene44119:CDS 50.0%
TCACCATTCATCACCACCTC+TGG + chr1.3:58747136-58747155 MS.gene44119:CDS 50.0%
TGGCCAAGAGATGCAAGGTT+GGG + chr1.3:58749051-58749070 MS.gene44119:CDS 50.0%
TTGGCCAAGAGATGCAAGGT+TGG + chr1.3:58749050-58749069 MS.gene44119:CDS 50.0%
! TGTATGCCATCATGGGTTGC+TGG - chr1.3:58749764-58749783 None:intergenic 50.0%
!! CCCACCCATTGCTTTGAGAA+AGG - chr1.3:58748227-58748246 None:intergenic 50.0%
!! CGTCCGTTGGGAGTATTTGT+TGG + chr1.3:58748115-58748134 MS.gene44119:CDS 50.0%
!! TGCCGGCTTGTACAAGCATA+GGG - chr1.3:58748762-58748781 None:intergenic 50.0%
!! TTGCCGGCTTGTACAAGCAT+AGG - chr1.3:58748763-58748782 None:intergenic 50.0%
TGCTCCAAAGAGGGTAGACG+CGG + chr1.3:58747545-58747564 MS.gene44119:CDS 55.0%
! GGAGTTTGAGTCTGAGGCCT+TGG + chr1.3:58747415-58747434 MS.gene44119:CDS 55.0%
! TGCCCAGAGGTGGTGATGAA+TGG - chr1.3:58747142-58747161 None:intergenic 55.0%
ATCTTACCGGTGCCCAGAGG+TGG - chr1.3:58747152-58747171 None:intergenic 60.0%
GACACCGCGTCTACCCTCTT+TGG - chr1.3:58747552-58747571 None:intergenic 60.0%
TCATCACCACCTCTGGGCAC+CGG + chr1.3:58747143-58747162 MS.gene44119:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 58747098 58749934 58747098 ID=MS.gene44119
chr1.3 mRNA 58747098 58749934 58747098 ID=MS.gene44119.t1;Parent=MS.gene44119
chr1.3 exon 58747098 58747164 58747098 ID=MS.gene44119.t1.exon1;Parent=MS.gene44119.t1
chr1.3 CDS 58747098 58747164 58747098 ID=cds.MS.gene44119.t1;Parent=MS.gene44119.t1
chr1.3 exon 58747303 58749485 58747303 ID=MS.gene44119.t1.exon2;Parent=MS.gene44119.t1
chr1.3 CDS 58747303 58749485 58747303 ID=cds.MS.gene44119.t1;Parent=MS.gene44119.t1
chr1.3 exon 58749580 58749645 58749580 ID=MS.gene44119.t1.exon3;Parent=MS.gene44119.t1
chr1.3 CDS 58749580 58749645 58749580 ID=cds.MS.gene44119.t1;Parent=MS.gene44119.t1
chr1.3 exon 58749752 58749934 58749752 ID=MS.gene44119.t1.exon4;Parent=MS.gene44119.t1
chr1.3 CDS 58749752 58749934 58749752 ID=cds.MS.gene44119.t1;Parent=MS.gene44119.t1
Gene Sequence

>MS.gene44119

ATGGTAGAAACGACACACGTAGAACATGATGCAAATCTTCACCATTCATCACCACCTCTGGGCACCGGTAAGATTTTGTTCTTTGTCGATGAATATACACACGTAGAACATGAATATTTGAAAGTATTTGGACAATATAAAATTAATATAAAATGTCTATGAATATTAACATGTTGACTTTATATTTTTTTTTTCCATTTTCTAGATAATGTGAATATTACATCCAATCCAATGGTTGAAGGTGTAGAAAAATTGGTGAATGATATCGTGCAACAGGGAAAAGAGAGTACTGTTAGTAATGTACCACACTTGGAAATGGAGTTTGAGTCTGAGGCCTTGGCATATGAATTTTATAATGAGTATAGTAGGAAATGTGGTTTTGGTATCCGTCGAGAATATGCAAATAAAAGCAAAAAAGATGGAGTTCTTACTTCAAGAAAATTTGTGTGCTCCAAAGAGGGTAGACGCGGTGTCGACAAACGTGATTACTTAACAAAAGAGGCTCGAGCAGAAACTAGAACAGGATGTTTAGCACGTATGGTTATTTCACTTGATCGGAAGATTGGAAAATACAAGGTTATTGACTTTGTAGCGGAACATAATCACCTTCTTCTGCCAGCTGAGTATGTTTATATGATTCGCTCTCATCGACACATATCTGAGTCACAAGCATCCCAAATTGTATTGGCTGATGAATCTGGATTGAAACCAAAAGATTTTCATGAATTTGTGTCAAAACAAGCTGGTGGAATAAACACTGTTGGTTACACAAGACAAGACCATAGAAATTTGCTTCGCACTAAAAGGAACCACTCACTAAGGTATGGTGAAGTAGGTGCATTACTAATACATTTCAAAAAGCAAAGTGAAAATCCTTCATTCTTTTATGAGTTTCAGATGGATGTTGAAGAGCAAATAACAAACATATTTTGGGCCGATGCACAAATGATAAATGATTATGGGTACTTTGGTGATGTTGTCATTTTTGACACCACATTCAAGACAAATAAGAATTATCGTCCGTTGGGAGTATTTGTTGGCCTTAATAGCCACAGACAAACAATTGTTTATGGGGCAGCATTGTTATATGATGAAACAATCCCTTCTTTTCAATGGTTATTTGAAACCTTTCTCAAAGCAATGGGTGGGAAAAAGCCTAAAACCATTCTAACAGATCAAGATGCAGCAATGGCTAAGGCTCTCTCTATAGTCATGCCAGAAACATTTCATGGATTGTGCACTTGGCATATAAGGGAAAATGCCATAAGGCATGTGAATCATCTATATCAACAGAGCTCACAATTCTGCTCAGATTTTGAAGCATGCATTGATCTACACGAAGAGGAAGAAGAATTTTTGAGTGGATGGGAGGCTTTACTAGTTGAGCATAATGTTTCTAAAGACTCATGGCTCCATAATATTTTTCGATTCAAGGAAAAATGGGCATGGGCTTATGTGCGAAAGACTTTCACTGCAGGTATGAGATCTACTCAATTAAGTGAGAGTTTTAATGCTGATTTAAAAAATCATTTGAAGTCAGATTTAAATTTGATACAATTTTTCACACACTTTGAAAGAGTTGTCAACGGAAAGCGGAATAATGAGTCAGAAGCTGAATATGAGTCGAGACAAAAGTTGCCAAGATTGAAAATGAAAAAGATCCCTATGCTTGTACAAGCCGGCAATGTTTACACTACAAGAATTTTTGAGGAATTCCAAGATGAATATGAGGAATGTCAAGCTTCTTGTTTAAGAAATTTGAAAGAAGGGTCATATGTTGTTACAAATTATGATAACAGCAAGGAGCGGATAGTAGTAGCGAATCATATGGATAAAACAGTTGCTTGTGATTGTCGAAAGTTTGAGACACATGGAATCTTATGCAGTCATGCTTTGAAAGTTTTAGATTTTATGAATGTTAAGCTAATTCCTCAGCAATATATACTAAAACGTTGGCCAAGAGATGCAAGGTTGGGATGTAATCAAAATTGGAAAGGGGAACATATTGAATTGGACATAAAAGCTCATTTCATGAAACGATACAATGAGTTATGTCCTCAAGCAGTTAAATTGAGCAATAGAGCATCAGAATCTCATGAAACTTACACATTTTTGTCCAAAGTTTATGAAGAGTCTCATAAAATAGTTGAAGATATGCTGACTAAAAAGTCTATGGATGGAGAGTCAATTGGAATGAGTCATGTGTCTATATCAATTGCAAATGAAAAAAAGGATCAGAATGTGGACACTGTTGATCTTGGTGGGGCAAAAGCAATAAAGAGCCGAGATTGCTTAGATAGGACTAAAAAAAGGCATCCAACTTGGCTTGAGAAATTGGATAAAAAGAGACAAAAAAGGCTATCACAGACTAAGAGAAAGAAAAAATTGGTAAACAACTCTTTACTTTCTTTTTAACATGTGCCTAGAATTTTAGTACTGCTATCACATATACATAATACATATTACTTTTACTACTATGTAGGAACAATCTCCTGCAAACAATGATGGTACACATGCTTTGAATGGAAGGAAGAGAAAGAAAAAATTGGTAAAATATCCATACTTTCTTTTTAACATGTGACAGAATTTCAGTACTGCTATCACATATATATATATATATATATATAATACATGTTACTTCTACTATTATGTAGGAACAATCTCCAGCAACCCATGATGGCATACATGCTTGGAATGGAAGCCAATCTGGATATGGAAGCCATGCTTTGATGGCATCTCAAACTGAGAATGCAAGTCGACATTTACCTTTAACAGAAGCTGACAATGGAAGTCTACATGAGATTAGGATCCAAATGTCAAATGAGATTAGGATCTAA
Protein sequence

>MS.gene44119.t1

MVETTHVEHDANLHHSSPPLGTDNVNITSNPMVEGVEKLVNDIVQQGKESTVSNVPHLEMEFESEALAYEFYNEYSRKCGFGIRREYANKSKKDGVLTSRKFVCSKEGRRGVDKRDYLTKEARAETRTGCLARMVISLDRKIGKYKVIDFVAEHNHLLLPAEYVYMIRSHRHISESQASQIVLADESGLKPKDFHEFVSKQAGGINTVGYTRQDHRNLLRTKRNHSLRYGEVGALLIHFKKQSENPSFFYEFQMDVEEQITNIFWADAQMINDYGYFGDVVIFDTTFKTNKNYRPLGVFVGLNSHRQTIVYGAALLYDETIPSFQWLFETFLKAMGGKKPKTILTDQDAAMAKALSIVMPETFHGLCTWHIRENAIRHVNHLYQQSSQFCSDFEACIDLHEEEEEFLSGWEALLVEHNVSKDSWLHNIFRFKEKWAWAYVRKTFTAGMRSTQLSESFNADLKNHLKSDLNLIQFFTHFERVVNGKRNNESEAEYESRQKLPRLKMKKIPMLVQAGNVYTTRIFEEFQDEYEECQASCLRNLKEGSYVVTNYDNSKERIVVANHMDKTVACDCRKFETHGILCSHALKVLDFMNVKLIPQQYILKRWPRDARLGCNQNWKGEHIELDIKAHFMKRYNELCPQAVKLSNRASESHETYTFLSKVYEESHKIVEDMLTKKSMDGESIGMSHVSISIANEKKDQNVDTVDLGGAKAIKSRDCLDRTKKRHPTWLEKLDKKRQKRLSQTKRKKKLEQSPANNDGTHALNGRKRKKKLEQSPATHDGIHAWNGSQSGYGSHALMASQTENASRHLPLTEADNGSLHEIRIQMSNEIRI