Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44126.t1 | PNX73002.1 | 49.4 | 799 | 140 | 8 | 54 | 622 | 1 | 765 | 4.30E-186 | 661.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44126.t1 | Q9SZL8 | 32.1 | 221 | 133 | 6 | 54 | 259 | 77 | 295 | 3.5e-19 | 98.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44126.t1 | A0A2K3L384 | 49.4 | 799 | 140 | 8 | 54 | 622 | 1 | 765 | 3.1e-186 | 661.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene44126.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44126.t1 | MTR_0645s0010 | 97.561 | 82 | 2 | 0 | 252 | 333 | 44 | 125 | 1.88e-47 | 163 |
| MS.gene44126.t1 | MTR_7g446520 | 40.476 | 210 | 110 | 1 | 43 | 252 | 81 | 275 | 8.72e-43 | 157 |
| MS.gene44126.t1 | MTR_7g446480 | 47.287 | 129 | 68 | 0 | 124 | 252 | 140 | 268 | 1.31e-31 | 125 |
| MS.gene44126.t1 | MTR_7g446510 | 45.185 | 135 | 74 | 0 | 118 | 252 | 149 | 283 | 2.71e-30 | 122 |
| MS.gene44126.t1 | MTR_7g028855 | 43.046 | 151 | 83 | 1 | 43 | 190 | 113 | 263 | 3.19e-30 | 124 |
| MS.gene44126.t1 | MTR_1g070355 | 31.641 | 256 | 157 | 6 | 6 | 252 | 31 | 277 | 2.14e-27 | 117 |
| MS.gene44126.t1 | MTR_5g076070 | 28.272 | 191 | 131 | 2 | 25 | 209 | 25 | 215 | 1.57e-23 | 101 |
| MS.gene44126.t1 | MTR_4g035820 | 29.845 | 258 | 157 | 8 | 8 | 252 | 36 | 282 | 2.39e-20 | 95.9 |
| MS.gene44126.t1 | MTR_6g022080 | 27.485 | 171 | 121 | 1 | 42 | 209 | 77 | 247 | 8.06e-20 | 89.7 |
| MS.gene44126.t1 | MTR_0402s0040 | 34.104 | 173 | 109 | 5 | 54 | 223 | 30 | 200 | 3.37e-19 | 91.7 |
| MS.gene44126.t1 | MTR_8g035530 | 51.429 | 70 | 34 | 0 | 41 | 110 | 5 | 74 | 1.73e-18 | 80.5 |
| MS.gene44126.t1 | MTR_3g080590 | 43.820 | 89 | 48 | 1 | 12 | 100 | 69 | 155 | 1.24e-16 | 78.2 |
| MS.gene44126.t1 | MTR_6g051425 | 27.149 | 221 | 134 | 8 | 58 | 257 | 25 | 239 | 1.15e-14 | 76.3 |
| MS.gene44126.t1 | MTR_5g015480 | 34.959 | 123 | 72 | 5 | 54 | 171 | 60 | 179 | 8.92e-14 | 72.4 |
| MS.gene44126.t1 | MTR_1g008290 | 29.412 | 153 | 95 | 4 | 90 | 242 | 1 | 140 | 4.90e-13 | 67.4 |
| MS.gene44126.t1 | MTR_8g468460 | 39.583 | 96 | 56 | 2 | 252 | 346 | 11 | 105 | 5.80e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44126.t1 | AT4G38180 | 31.222 | 221 | 137 | 4 | 53 | 259 | 76 | 295 | 7.15e-21 | 97.8 |
| MS.gene44126.t1 | AT4G38180 | 27.835 | 194 | 125 | 5 | 210 | 391 | 448 | 638 | 5.49e-11 | 66.2 |
| MS.gene44126.t1 | AT5G28530 | 27.442 | 215 | 141 | 5 | 56 | 256 | 61 | 274 | 1.98e-16 | 83.6 |
| MS.gene44126.t1 | AT5G28530 | 27.442 | 215 | 141 | 5 | 56 | 256 | 61 | 274 | 1.98e-16 | 83.6 |
| MS.gene44126.t1 | AT5G28530 | 27.442 | 215 | 141 | 5 | 56 | 256 | 61 | 274 | 2.08e-16 | 83.6 |
| MS.gene44126.t1 | AT5G28530 | 27.451 | 204 | 137 | 5 | 56 | 254 | 61 | 258 | 2.65e-16 | 83.2 |
| MS.gene44126.t1 | AT5G28530 | 27.451 | 204 | 137 | 5 | 56 | 254 | 61 | 258 | 2.67e-16 | 83.2 |
| MS.gene44126.t1 | AT1G10240 | 29.648 | 199 | 132 | 6 | 56 | 247 | 54 | 251 | 8.74e-15 | 78.6 |
| MS.gene44126.t1 | AT1G10240 | 29.648 | 199 | 132 | 6 | 56 | 247 | 54 | 251 | 8.74e-15 | 78.6 |
| MS.gene44126.t1 | AT3G07500 | 32.164 | 171 | 90 | 7 | 54 | 213 | 37 | 192 | 7.10e-12 | 65.9 |
| MS.gene44126.t1 | AT4G38170 | 26.316 | 190 | 125 | 5 | 210 | 387 | 213 | 399 | 5.36e-11 | 65.9 |
| MS.gene44126.t1 | AT4G15090 | 22.776 | 281 | 202 | 6 | 251 | 522 | 474 | 748 | 9.49e-11 | 65.5 |
| MS.gene44126.t1 | AT4G15090 | 22.776 | 281 | 202 | 6 | 251 | 522 | 474 | 748 | 9.49e-11 | 65.5 |
| MS.gene44126.t1 | AT4G15090 | 22.776 | 281 | 202 | 6 | 251 | 522 | 474 | 748 | 9.49e-11 | 65.5 |
| MS.gene44126.t1 | AT4G15090 | 22.776 | 281 | 202 | 6 | 251 | 522 | 474 | 748 | 9.49e-11 | 65.5 |
| MS.gene44126.t1 | AT4G15090 | 22.776 | 281 | 202 | 6 | 251 | 522 | 474 | 748 | 9.49e-11 | 65.5 |
Find 121 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGGGTTTAGCATTATC+TGG | 0.190370 | 1.3:+58832068 | None:intergenic |
| TCAATATTAACTGTAATATT+TGG | 0.204657 | 1.3:+58831484 | None:intergenic |
| TTCATTTGATTCCGAATTAT+AGG | 0.217986 | 1.3:-58833648 | MS.gene44126:CDS |
| TTCCTCATTATGACCTTCTT+TGG | 0.219846 | 1.3:+58832280 | None:intergenic |
| ATGATTTCATTCAGAAGATT+TGG | 0.259205 | 1.3:-58833726 | MS.gene44126:CDS |
| AATGTCTATATTTGTTGTTT+TGG | 0.267598 | 1.3:+58831531 | None:intergenic |
| TCATATACTAGGTTTCTTAA+TGG | 0.276146 | 1.3:-58833563 | MS.gene44126:CDS |
| TTCAGTAGTGATAATGGTTT+TGG | 0.283086 | 1.3:-58834057 | MS.gene44126:CDS |
| CATGATGTTGATAATATCTT+TGG | 0.283165 | 1.3:-58831616 | MS.gene44126:CDS |
| AGAAGAATGAAGATAGTAAT+AGG | 0.287511 | 1.3:-58833792 | MS.gene44126:CDS |
| GGAATCAAATGAACAAGATT+TGG | 0.296397 | 1.3:+58833658 | None:intergenic |
| TCACTCAATTTCCTATAATT+CGG | 0.322105 | 1.3:+58833637 | None:intergenic |
| CATATACTAGGTTTCTTAAT+GGG | 0.328869 | 1.3:-58833562 | MS.gene44126:CDS |
| GGTTTCTTAATGGGCCAAAA+AGG | 0.332076 | 1.3:-58833553 | MS.gene44126:CDS |
| GTAGAATTCAGTAGTGATAA+TGG | 0.335573 | 1.3:-58834063 | MS.gene44126:CDS |
| ACTTAGTTCATGGTTGTGAT+TGG | 0.360489 | 1.3:+58833684 | None:intergenic |
| GAAGTTAATCCACCCACATT+TGG | 0.365859 | 1.3:+58831266 | None:intergenic |
| CACTTACCGCTGCATTCAAT+AGG | 0.379313 | 1.3:-58832232 | MS.gene44126:CDS |
| CTTAGTTCATGGTTGTGATT+GGG | 0.381070 | 1.3:+58833685 | None:intergenic |
| GAGTTTACCTTTACAGATGA+TGG | 0.397514 | 1.3:-58833385 | MS.gene44126:CDS |
| TAACAATGCCATTGATTATG+AGG | 0.400069 | 1.3:-58832192 | MS.gene44126:CDS |
| AAAGTTCCTAGAAGTCAAAA+AGG | 0.400507 | 1.3:-58832588 | MS.gene44126:CDS |
| GTGTTGACAACTTCCTTGCC+TGG | 0.404467 | 1.3:-58832647 | MS.gene44126:CDS |
| CATTTGGTACTGACATAGAA+TGG | 0.405927 | 1.3:+58831644 | None:intergenic |
| CTACAGACATAATGAATTGT+TGG | 0.407345 | 1.3:-58832699 | MS.gene44126:CDS |
| AATCTTCTGAATGAAATCAT+AGG | 0.410758 | 1.3:+58833729 | None:intergenic |
| AAAGGAGGACATGAAAATCT+TGG | 0.412933 | 1.3:-58833535 | MS.gene44126:CDS |
| AAATGTCAATGGCAACAATA+AGG | 0.413929 | 1.3:-58832114 | MS.gene44126:CDS |
| GATTTGGAGGACTTAGTTCA+TGG | 0.422475 | 1.3:+58833674 | None:intergenic |
| AACAACATTCCTTTGTATCC+TGG | 0.428695 | 1.3:-58831203 | MS.gene44126:CDS |
| TCGGATAAACAGATTGTTAG+TGG | 0.430560 | 1.3:-58833613 | MS.gene44126:CDS |
| TAACATACACTATTTGTTCC+AGG | 0.434470 | 1.3:+58831185 | None:intergenic |
| AAAGCGTATGCTCGTTTCCA+TGG | 0.435800 | 1.3:-58833916 | MS.gene44126:CDS |
| ACAGTTTACGAGCGTGTTGA+AGG | 0.436704 | 1.3:-58831084 | MS.gene44126:intron |
| CAAGGAAGGGTTAGAATTGA+AGG | 0.441504 | 1.3:-58833475 | MS.gene44126:CDS |
| TCAACATCATGTCTACCATT+TGG | 0.448971 | 1.3:+58831628 | None:intergenic |
| CATTGATTATGAGGAAGCTT+TGG | 0.458582 | 1.3:-58832183 | MS.gene44126:CDS |
| CTCATTATGACCTTCTTTGG+AGG | 0.460106 | 1.3:+58832283 | None:intergenic |
| AATAGGCAAACCATGCGAAC+TGG | 0.460478 | 1.3:-58833775 | MS.gene44126:CDS |
| AAAGTCTAATTTGCAAAAGA+TGG | 0.463829 | 1.3:-58832343 | MS.gene44126:CDS |
| AAGGTCAATAAATCTGTTGT+TGG | 0.472287 | 1.3:-58832095 | MS.gene44126:CDS |
| GTTAGTGGTTTGCATTCTCA+AGG | 0.476835 | 1.3:-58833598 | MS.gene44126:CDS |
| ATGCTGAGTTGCTTCACTAT+AGG | 0.481546 | 1.3:+58834107 | None:intergenic |
| GCGATTACTTTGCAATAAAG+AGG | 0.481547 | 1.3:-58833836 | MS.gene44126:CDS |
| GTTTCCATGGGTTTGTCGTA+AGG | 0.482758 | 1.3:-58833903 | MS.gene44126:CDS |
| GGGTTTCATCATTCATGTCA+TGG | 0.487067 | 1.3:+58831665 | None:intergenic |
| ATTTGGTACTGACATAGAAT+GGG | 0.493491 | 1.3:+58831645 | None:intergenic |
| CAAAGCTTCCTCATAATCAA+TGG | 0.494233 | 1.3:+58832184 | None:intergenic |
| GAAGCTTCACGCTCAAATCC+AGG | 0.499670 | 1.3:+58832629 | None:intergenic |
| TCATCATTTGCCTCCAAAGA+AGG | 0.501389 | 1.3:-58832293 | MS.gene44126:CDS |
| CAAGATGGAACCATGGTGTT+GGG | 0.503043 | 1.3:-58831334 | MS.gene44126:CDS |
| AACTTCTTCACAATTCCCTC+CGG | 0.506498 | 1.3:-58831249 | MS.gene44126:CDS |
| AAATGATGATATAAAAGCTA+TGG | 0.514775 | 1.3:-58833974 | MS.gene44126:CDS |
| GTCACTCACCATGCTGAGGT+TGG | 0.515437 | 1.3:-58832539 | MS.gene44126:CDS |
| TTATAGGAAATTGAGTGAAT+CGG | 0.515530 | 1.3:-58833632 | MS.gene44126:CDS |
| AAGGAAGGATGATGTGGTAA+AGG | 0.518755 | 1.3:-58833884 | MS.gene44126:CDS |
| CCATGGGTTTGTCGTAAGGA+AGG | 0.524385 | 1.3:-58833899 | MS.gene44126:CDS |
| CGTCGTGAGGGAAATGTCAA+TGG | 0.525065 | 1.3:-58832125 | MS.gene44126:CDS |
| TGCCACATGGATTTGCAAGA+TGG | 0.527779 | 1.3:-58831349 | MS.gene44126:CDS |
| GTAAGAACCTGTCATATACT+AGG | 0.532163 | 1.3:-58833574 | MS.gene44126:CDS |
| GATTATGAGGAAGCTTTGGA+AGG | 0.532969 | 1.3:-58832179 | MS.gene44126:CDS |
| TAACCGACCATCATCTGTAA+AGG | 0.533842 | 1.3:+58833378 | None:intergenic |
| AAATGGTCATGTTCCGCCGA+TGG | 0.535969 | 1.3:-58832256 | MS.gene44126:CDS |
| ATCAAATGAACAAGATTTGG+AGG | 0.541540 | 1.3:+58833661 | None:intergenic |
| AATGGTCATGTTCCGCCGAT+GGG | 0.542538 | 1.3:-58832255 | MS.gene44126:CDS |
| AAGCGTATGCTCGTTTCCAT+GGG | 0.546934 | 1.3:-58833915 | MS.gene44126:CDS |
| ACTTCATGACAGAAATAATG+TGG | 0.547790 | 1.3:+58832390 | None:intergenic |
| CCACCGTACACAGGAAAAGC+GGG | 0.548539 | 1.3:+58831293 | None:intergenic |
| TAAGAAACCTAGTATATGAC+AGG | 0.549198 | 1.3:+58833567 | None:intergenic |
| CATTCTATGTCAGTACCAAA+TGG | 0.549713 | 1.3:-58831643 | MS.gene44126:CDS |
| GGTATTAAACGTAAGAGAGA+TGG | 0.556812 | 1.3:-58831595 | MS.gene44126:CDS |
| AAGAGAGATGGTGACAAAGC+CGG | 0.567634 | 1.3:-58831583 | MS.gene44126:CDS |
| ACAGAAATAATGTGGGAACA+TGG | 0.568395 | 1.3:+58832398 | None:intergenic |
| AGCAAGACATCCAGTTCGCA+TGG | 0.572129 | 1.3:+58833765 | None:intergenic |
| GCAAGATGGAACCATGGTGT+TGG | 0.572620 | 1.3:-58831335 | MS.gene44126:CDS |
| AACCATGGTGTTGGGTATGT+TGG | 0.578818 | 1.3:-58831326 | MS.gene44126:CDS |
| ATTATGAGGAAGCTTTGGAA+GGG | 0.579688 | 1.3:-58832178 | MS.gene44126:CDS |
| CGATTACTTTGCAATAAAGA+GGG | 0.582695 | 1.3:-58833835 | MS.gene44126:CDS |
| GGAATGTTGTTATAATGTGA+TGG | 0.585101 | 1.3:+58831215 | None:intergenic |
| ATTTGGAGTCACAGAAGCAT+CGG | 0.589265 | 1.3:+58831501 | None:intergenic |
| GTACGGTGGGATTCCAAATG+TGG | 0.589315 | 1.3:-58831279 | MS.gene44126:CDS |
| AAGATAAATGTACGTCGTGA+GGG | 0.589836 | 1.3:-58832137 | MS.gene44126:CDS |
| GGCAAGGAAGTTGTCAACAC+AGG | 0.590629 | 1.3:+58832650 | None:intergenic |
| TGCATTCAATAGGCTTTGTG+AGG | 0.594478 | 1.3:-58832222 | MS.gene44126:CDS |
| TATAACTACACTGATCATCA+AGG | 0.599053 | 1.3:-58833493 | MS.gene44126:CDS |
| CTCCAAAGAAGGTCATAATG+AGG | 0.600558 | 1.3:-58832282 | MS.gene44126:CDS |
| CAAGATAAATGTACGTCGTG+AGG | 0.601675 | 1.3:-58832138 | MS.gene44126:CDS |
| ACTACACTGATCATCAAGGA+AGG | 0.601680 | 1.3:-58833489 | MS.gene44126:CDS |
| CAGCGGTAAGTGCCCATCGG+CGG | 0.602402 | 1.3:+58832243 | None:intergenic |
| CACTATTTCCAACCTCAGCA+TGG | 0.602509 | 1.3:+58832531 | None:intergenic |
| TACGGTGGGATTCCAAATGT+GGG | 0.603843 | 1.3:-58831278 | MS.gene44126:CDS |
| CCCACCGTACACAGGAAAAG+CGG | 0.608963 | 1.3:+58831292 | None:intergenic |
| TTCACGCTCAAATCCAGGCA+AGG | 0.610482 | 1.3:+58832634 | None:intergenic |
| TACGAGCGTGTTGAAGGACA+TGG | 0.612523 | 1.3:-58831078 | MS.gene44126:CDS |
| TTGTAGAATGGTATGCCACA+TGG | 0.614759 | 1.3:-58831362 | MS.gene44126:intron |
| ATCTGTCACTCACCATGCTG+AGG | 0.616402 | 1.3:-58832543 | MS.gene44126:CDS |
| TGTCGTAAGGAAGGATGATG+TGG | 0.617262 | 1.3:-58833890 | MS.gene44126:CDS |
| CTATTTGTTCCAGGATACAA+AGG | 0.622428 | 1.3:+58831194 | None:intergenic |
| TGTTGTTATAATGTGATGGA+AGG | 0.624294 | 1.3:+58831219 | None:intergenic |
| CCTTCCTTACGACAAACCCA+TGG | 0.631542 | 1.3:+58833899 | None:intergenic |
| TTACCTTTACAGATGATGGT+CGG | 0.632472 | 1.3:-58833381 | MS.gene44126:intron |
| AGAAAGACAGAGAATTGCAA+TGG | 0.633911 | 1.3:-58834021 | MS.gene44126:CDS |
| CTTCATGACAGAAATAATGT+GGG | 0.634223 | 1.3:+58832391 | None:intergenic |
| CCAGATAATGCTAAACCCAA+AGG | 0.637551 | 1.3:-58832068 | MS.gene44126:CDS |
| TTTGGAATCCCACCGTACAC+AGG | 0.642001 | 1.3:+58831284 | None:intergenic |
| TCTCGATAATGATACTGTAG+AGG | 0.643267 | 1.3:-58834085 | MS.gene44126:CDS |
| ATGCAGCGGTAAGTGCCCAT+CGG | 0.647794 | 1.3:+58832240 | None:intergenic |
| TGTCATGAAGTATGAGAACA+TGG | 0.649925 | 1.3:-58832378 | MS.gene44126:CDS |
| CTACACTGATCATCAAGGAA+GGG | 0.653825 | 1.3:-58833488 | MS.gene44126:CDS |
| GGTGGGATTCCAAATGTGGG+TGG | 0.655522 | 1.3:-58831275 | MS.gene44126:CDS |
| TGTGATGGAAGGATGTCTGC+CGG | 0.655796 | 1.3:+58831230 | None:intergenic |
| GGAAGGGTTAGAATTGAAGG+TGG | 0.663188 | 1.3:-58833472 | MS.gene44126:CDS |
| ACAAAGCCTATTGAATGCAG+CGG | 0.663816 | 1.3:+58832226 | None:intergenic |
| TGATGTGGTAAAGGATCACG+AGG | 0.665235 | 1.3:-58833875 | MS.gene44126:CDS |
| ATGGAAGGATGTCTGCCGGA+GGG | 0.699279 | 1.3:+58831234 | None:intergenic |
| AGCTATGGAGTTTAGCACAG+AGG | 0.706449 | 1.3:-58833959 | MS.gene44126:CDS |
| TACCAACATACCCAACACCA+TGG | 0.713448 | 1.3:+58831324 | None:intergenic |
| TTCCATCTTGCAAATCCATG+TGG | 0.717728 | 1.3:+58831347 | None:intergenic |
| GGATTTGCAAGATGGAACCA+TGG | 0.726905 | 1.3:-58831341 | MS.gene44126:CDS |
| GATGGAAGGATGTCTGCCGG+AGG | 0.734244 | 1.3:+58831233 | None:intergenic |
| GATGTGGTAAAGGATCACGA+GGG | 0.855257 | 1.3:-58833874 | MS.gene44126:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATAAGTTTTAAAAAAT+TGG | + | chr1.3:58833997-58834016 | None:intergenic | 10.0% |
| !! | AAATCTTGGATTTATAAAAA+AGG | - | chr1.3:58831633-58831652 | MS.gene44126:CDS | 15.0% |
| !! | TCAATATTAACTGTAATATT+TGG | + | chr1.3:58833673-58833692 | None:intergenic | 15.0% |
| !!! | TGTATGATTTTTTCATTTTA+GGG | + | chr1.3:58833115-58833134 | None:intergenic | 15.0% |
| !!! | TTGTATGATTTTTTCATTTT+AGG | + | chr1.3:58833116-58833135 | None:intergenic | 15.0% |
| !! | AAATGATGATATAAAAGCTA+TGG | - | chr1.3:58831180-58831199 | MS.gene44126:intron | 20.0% |
| !! | ATATAAATTGAAGCAAATGT+GGG | - | chr1.3:58832287-58832306 | MS.gene44126:CDS | 20.0% |
| !!! | AATGTCTATATTTGTTGTTT+TGG | + | chr1.3:58833626-58833645 | None:intergenic | 20.0% |
| !!! | GTATGATTTTTTCATTTTAG+GGG | + | chr1.3:58833114-58833133 | None:intergenic | 20.0% |
| !!! | TCGGTTAGAAAATATATTTT+GGG | - | chr1.3:58831792-58831811 | MS.gene44126:intron | 20.0% |
| !!! | TGGAAATAGTGTAATTTTTA+GGG | - | chr1.3:58832635-58832654 | MS.gene44126:CDS | 20.0% |
| !!! | TTGGAAATAGTGTAATTTTT+AGG | - | chr1.3:58832634-58832653 | MS.gene44126:CDS | 20.0% |
| ! | AAACAATAGAGACATATAAG+TGG | - | chr1.3:58831974-58831993 | MS.gene44126:intron | 25.0% |
| ! | AACAATAGAGACATATAAGT+GGG | - | chr1.3:58831975-58831994 | MS.gene44126:intron | 25.0% |
| ! | AATCCTGTAAAAATTACAAG+CGG | + | chr1.3:58831904-58831923 | None:intergenic | 25.0% |
| ! | AATCTTCTGAATGAAATCAT+AGG | + | chr1.3:58831428-58831447 | None:intergenic | 25.0% |
| ! | AATTAAAGCACATGCAAAAA+TGG | + | chr1.3:58831947-58831966 | None:intergenic | 25.0% |
| ! | AATTATGCAGAAAATCAACA+AGG | + | chr1.3:58832416-58832435 | None:intergenic | 25.0% |
| ! | AGAAGAATGAAGATAGTAAT+AGG | - | chr1.3:58831362-58831381 | MS.gene44126:intron | 25.0% |
| ! | ATGATTTCATTCAGAAGATT+TGG | - | chr1.3:58831428-58831447 | MS.gene44126:intron | 25.0% |
| ! | ATGGTCAAAAACAATAAAGA+AGG | - | chr1.3:58832830-58832849 | MS.gene44126:intron | 25.0% |
| ! | CATATAAATTGAAGCAAATG+TGG | - | chr1.3:58832286-58832305 | MS.gene44126:CDS | 25.0% |
| ! | CATATACTAGGTTTCTTAAT+GGG | - | chr1.3:58831592-58831611 | MS.gene44126:CDS | 25.0% |
| ! | TCACTCAATTTCCTATAATT+CGG | + | chr1.3:58831520-58831539 | None:intergenic | 25.0% |
| ! | TCATATACTAGGTTTCTTAA+TGG | - | chr1.3:58831591-58831610 | MS.gene44126:CDS | 25.0% |
| ! | TTATAGGAAATTGAGTGAAT+CGG | - | chr1.3:58831522-58831541 | MS.gene44126:CDS | 25.0% |
| ! | TTCATTTGATTCCGAATTAT+AGG | - | chr1.3:58831506-58831525 | MS.gene44126:CDS | 25.0% |
| !! | AAAGGTAAACTCTGAAAAAA+AGG | + | chr1.3:58831761-58831780 | None:intergenic | 25.0% |
| !! | AAAGTCTAATTTGCAAAAGA+TGG | - | chr1.3:58832811-58832830 | MS.gene44126:intron | 25.0% |
| !! | ATACCTGTTCTTTTTATAAG+TGG | + | chr1.3:58831875-58831894 | None:intergenic | 25.0% |
| !! | GTCGGTTAGAAAATATATTT+TGG | - | chr1.3:58831791-58831810 | MS.gene44126:intron | 25.0% |
| !! | TTTTGCAAATTAGACTTTCT+GGG | + | chr1.3:58832809-58832828 | None:intergenic | 25.0% |
| !!! | ACTTTATTTCTTTTATGTCC+AGG | - | chr1.3:58833456-58833475 | MS.gene44126:CDS | 25.0% |
| !!! | ATGTTTTGATTGTTGTAGAA+TGG | - | chr1.3:58833780-58833799 | MS.gene44126:CDS | 25.0% |
| !!! | CATGATGTTGATAATATCTT+TGG | - | chr1.3:58833538-58833557 | MS.gene44126:CDS | 25.0% |
| AAAGTTCCTAGAAGTCAAAA+AGG | - | chr1.3:58832566-58832585 | MS.gene44126:CDS | 30.0% | |
| AAATGTCAATGGCAACAATA+AGG | - | chr1.3:58833040-58833059 | MS.gene44126:intron | 30.0% | |
| AAGGTCAATAAATCTGTTGT+TGG | - | chr1.3:58833059-58833078 | MS.gene44126:intron | 30.0% | |
| AAGGTGTGAATTCATTTATC+AGG | - | chr1.3:58832367-58832386 | MS.gene44126:CDS | 30.0% | |
| ACTTCATGACAGAAATAATG+TGG | + | chr1.3:58832767-58832786 | None:intergenic | 30.0% | |
| AGGTCATAATGAGGAAAAAA+TGG | - | chr1.3:58832881-58832900 | MS.gene44126:intron | 30.0% | |
| ATCAAATGAACAAGATTTGG+AGG | + | chr1.3:58831496-58831515 | None:intergenic | 30.0% | |
| ATGGTGTATCAAAGAATAAG+TGG | - | chr1.3:58832253-58832272 | MS.gene44126:CDS | 30.0% | |
| CGATTACTTTGCAATAAAGA+GGG | - | chr1.3:58831319-58831338 | MS.gene44126:CDS | 30.0% | |
| CTACAGACATAATGAATTGT+TGG | - | chr1.3:58832455-58832474 | MS.gene44126:CDS | 30.0% | |
| CTTCATGACAGAAATAATGT+GGG | + | chr1.3:58832766-58832785 | None:intergenic | 30.0% | |
| GGAATCAAATGAACAAGATT+TGG | + | chr1.3:58831499-58831518 | None:intergenic | 30.0% | |
| GGAATGTTGTTATAATGTGA+TGG | + | chr1.3:58833942-58833961 | None:intergenic | 30.0% | |
| GTAGAATTCAGTAGTGATAA+TGG | - | chr1.3:58831091-58831110 | MS.gene44126:intron | 30.0% | |
| TAACATACACTATTTGTTCC+AGG | + | chr1.3:58833972-58833991 | None:intergenic | 30.0% | |
| TAAGAAACCTAGTATATGAC+AGG | + | chr1.3:58831590-58831609 | None:intergenic | 30.0% | |
| TATAACTACACTGATCATCA+AGG | - | chr1.3:58831661-58831680 | MS.gene44126:CDS | 30.0% | |
| TGGTGTATCAAAGAATAAGT+GGG | - | chr1.3:58832254-58832273 | MS.gene44126:CDS | 30.0% | |
| ! | AGGCTTGATTATGAATGTTT+TGG | - | chr1.3:58831829-58831848 | MS.gene44126:intron | 30.0% |
| ! | CTTTTGCAAATTAGACTTTC+TGG | + | chr1.3:58832810-58832829 | None:intergenic | 30.0% |
| ! | GGTGTTAAATGTGTTTTCAA+AGG | - | chr1.3:58831996-58832015 | MS.gene44126:intron | 30.0% |
| ! | TAACAATGCCATTGATTATG+AGG | - | chr1.3:58832962-58832981 | MS.gene44126:intron | 30.0% |
| ! | TGTTGTTATAATGTGATGGA+AGG | + | chr1.3:58833938-58833957 | None:intergenic | 30.0% |
| ! | TTGAACTCTTCTAAGAATCT+GGG | + | chr1.3:58832165-58832184 | None:intergenic | 30.0% |
| ! | TTTTGGATGTTTTTCGTACA+TGG | + | chr1.3:58832022-58832041 | None:intergenic | 30.0% |
| !! | ATTTGGTACTGACATAGAAT+GGG | + | chr1.3:58833512-58833531 | None:intergenic | 30.0% |
| !! | GCTACTTTGAGTTATTTTCA+GGG | - | chr1.3:58831715-58831734 | MS.gene44126:intron | 30.0% |
| !!! | GATAATGGTTTTGGTAATGA+TGG | - | chr1.3:58831106-58831125 | MS.gene44126:intron | 30.0% |
| !!! | TGCTACTTTGAGTTATTTTC+AGG | - | chr1.3:58831714-58831733 | MS.gene44126:intron | 30.0% |
| !!! | TTCAGTAGTGATAATGGTTT+TGG | - | chr1.3:58831097-58831116 | MS.gene44126:intron | 30.0% |
| !!! | TTTTTAGGGTTAACGTTTAC+CGG | - | chr1.3:58832649-58832668 | MS.gene44126:CDS | 30.0% |
| AAAGGAGGACATGAAAATCT+TGG | - | chr1.3:58831619-58831638 | MS.gene44126:CDS | 35.0% | |
| AACAACATTCCTTTGTATCC+TGG | - | chr1.3:58833951-58833970 | MS.gene44126:CDS | 35.0% | |
| AAGAGAGTTGTTGACAGTTA+TGG | - | chr1.3:58832234-58832253 | MS.gene44126:CDS | 35.0% | |
| AAGATAAATGTACGTCGTGA+GGG | - | chr1.3:58833017-58833036 | MS.gene44126:intron | 35.0% | |
| ACAGAAATAATGTGGGAACA+TGG | + | chr1.3:58832759-58832778 | None:intergenic | 35.0% | |
| ACAGCAAATTCATCACAAGA+TGG | + | chr1.3:58833426-58833445 | None:intergenic | 35.0% | |
| ACATCAATTCCAGCAAGTAT+TGG | + | chr1.3:58833209-58833228 | None:intergenic | 35.0% | |
| ACGCCACTTATAAAAAGAAC+AGG | - | chr1.3:58831869-58831888 | MS.gene44126:intron | 35.0% | |
| ACTTAGTTCATGGTTGTGAT+TGG | + | chr1.3:58831473-58831492 | None:intergenic | 35.0% | |
| AGAAAGACAGAGAATTGCAA+TGG | - | chr1.3:58831133-58831152 | MS.gene44126:intron | 35.0% | |
| AGAAGTCAAAAAGGCGATAA+AGG | - | chr1.3:58832575-58832594 | MS.gene44126:CDS | 35.0% | |
| CAAAGCTTCCTCATAATCAA+TGG | + | chr1.3:58832973-58832992 | None:intergenic | 35.0% | |
| CATTCTATGTCAGTACCAAA+TGG | - | chr1.3:58833511-58833530 | MS.gene44126:CDS | 35.0% | |
| CTATTTGTTCCAGGATACAA+AGG | + | chr1.3:58833963-58833982 | None:intergenic | 35.0% | |
| CTTAGTTCATGGTTGTGATT+GGG | + | chr1.3:58831472-58831491 | None:intergenic | 35.0% | |
| GAGATGTATTTCCGAATTCA+AGG | - | chr1.3:58832085-58832104 | MS.gene44126:CDS | 35.0% | |
| GAGTTTACCTTTACAGATGA+TGG | - | chr1.3:58831769-58831788 | MS.gene44126:intron | 35.0% | |
| GCGATTACTTTGCAATAAAG+AGG | - | chr1.3:58831318-58831337 | MS.gene44126:CDS | 35.0% | |
| GGATAAAGAAGAAGATGAGA+AGG | - | chr1.3:58833259-58833278 | MS.gene44126:intron | 35.0% | |
| GGTATTAAACGTAAGAGAGA+TGG | - | chr1.3:58833559-58833578 | MS.gene44126:CDS | 35.0% | |
| GTAAGAACCTGTCATATACT+AGG | - | chr1.3:58831580-58831599 | MS.gene44126:CDS | 35.0% | |
| TCAACATCATGTCTACCATT+TGG | + | chr1.3:58833529-58833548 | None:intergenic | 35.0% | |
| TCGGATAAACAGATTGTTAG+TGG | - | chr1.3:58831541-58831560 | MS.gene44126:CDS | 35.0% | |
| TCTCGATAATGATACTGTAG+AGG | - | chr1.3:58831069-58831088 | MS.gene44126:CDS | 35.0% | |
| TGATGTCACATTTGTAGATG+AGG | - | chr1.3:58833223-58833242 | MS.gene44126:intron | 35.0% | |
| TGTCATGAAGTATGAGAACA+TGG | - | chr1.3:58832776-58832795 | MS.gene44126:intron | 35.0% | |
| TTCCTCATTATGACCTTCTT+TGG | + | chr1.3:58832877-58832896 | None:intergenic | 35.0% | |
| TTCTAACTCCACACACAAAA+TGG | + | chr1.3:58832332-58832351 | None:intergenic | 35.0% | |
| ! | AAGCCGCTTGTAATTTTTAC+AGG | - | chr1.3:58831898-58831917 | MS.gene44126:intron | 35.0% |
| ! | AGAGTCTTGTGTTGAAAAAC+CGG | + | chr1.3:58833593-58833612 | None:intergenic | 35.0% |
| ! | CATTGATTATGAGGAAGCTT+TGG | - | chr1.3:58832971-58832990 | MS.gene44126:intron | 35.0% |
| ! | GATTTTCATGTCCTCCTTTT+TGG | + | chr1.3:58831618-58831637 | None:intergenic | 35.0% |
| ! | GTTGAACTCTTCTAAGAATC+TGG | + | chr1.3:58832166-58832185 | None:intergenic | 35.0% |
| ! | TTACCTTTACAGATGATGGT+CGG | - | chr1.3:58831773-58831792 | MS.gene44126:intron | 35.0% |
| !! | ATTATGAGGAAGCTTTGGAA+GGG | - | chr1.3:58832976-58832995 | MS.gene44126:intron | 35.0% |
| !! | CATTTGGTACTGACATAGAA+TGG | + | chr1.3:58833513-58833532 | None:intergenic | 35.0% |
| !! | CCTCATTGATTTATCTCCAT+CGG | + | chr1.3:58832055-58832074 | None:intergenic | 35.0% |
| !!! | TTATCGCCTTTTTGACTTCT+AGG | + | chr1.3:58832575-58832594 | None:intergenic | 35.0% |
| !!! | TTATGAATGTTTTGGCGATG+TGG | - | chr1.3:58831837-58831856 | MS.gene44126:intron | 35.0% |
| !!! | TTTTTGGGTTCATCATGACA+AGG | - | chr1.3:58832683-58832702 | MS.gene44126:CDS | 35.0% |
| AACTTCTTCACAATTCCCTC+CGG | - | chr1.3:58833905-58833924 | MS.gene44126:CDS | 40.0% | |
| AAGGAAGGATGATGTGGTAA+AGG | - | chr1.3:58831270-58831289 | MS.gene44126:CDS | 40.0% | |
| ACAAAGCCTATTGAATGCAG+CGG | + | chr1.3:58832931-58832950 | None:intergenic | 40.0% | |
| ACTACACTGATCATCAAGGA+AGG | - | chr1.3:58831665-58831684 | MS.gene44126:CDS | 40.0% | |
| AGAACGACATCGATATGTGA+AGG | - | chr1.3:58832348-58832367 | MS.gene44126:CDS | 40.0% | |
| AGAAGATGAGAAGGAGAAAG+AGG | - | chr1.3:58833268-58833287 | MS.gene44126:intron | 40.0% | |
| ATGCTGAGTTGCTTCACTAT+AGG | + | chr1.3:58831050-58831069 | None:intergenic | 40.0% | |
| CAAAAATGGTCGTTTCACCA+TGG | + | chr1.3:58831933-58831952 | None:intergenic | 40.0% | |
| CAAGATAAATGTACGTCGTG+AGG | - | chr1.3:58833016-58833035 | MS.gene44126:intron | 40.0% | |
| CAAGGAAGGGTTAGAATTGA+AGG | - | chr1.3:58831679-58831698 | MS.gene44126:CDS | 40.0% | |
| CACTCAGACTCAAATTGTTC+AGG | + | chr1.3:58832213-58832232 | None:intergenic | 40.0% | |
| CCAGATAATGCTAAACCCAA+AGG | - | chr1.3:58833086-58833105 | MS.gene44126:intron | 40.0% | |
| CCGATGGAGATAAATCAATG+AGG | - | chr1.3:58832052-58832071 | MS.gene44126:CDS | 40.0% | |
| CTACACTGATCATCAAGGAA+GGG | - | chr1.3:58831666-58831685 | MS.gene44126:CDS | 40.0% | |
| CTCATTATGACCTTCTTTGG+AGG | + | chr1.3:58832874-58832893 | None:intergenic | 40.0% | |
| CTCCAAAGAAGGTCATAATG+AGG | - | chr1.3:58832872-58832891 | MS.gene44126:intron | 40.0% | |
| CTGAACAATTTGAGTCTGAG+TGG | - | chr1.3:58832211-58832230 | MS.gene44126:CDS | 40.0% | |
| GAAGTTAATCCACCCACATT+TGG | + | chr1.3:58833891-58833910 | None:intergenic | 40.0% | |
| GACGTTGTTCTCGTTGTAAA+AGG | - | chr1.3:58833159-58833178 | MS.gene44126:intron | 40.0% | |
| GATGTAGATGCCATGAACAA+AGG | + | chr1.3:58832116-58832135 | None:intergenic | 40.0% | |
| GATTTGGAGGACTTAGTTCA+TGG | + | chr1.3:58831483-58831502 | None:intergenic | 40.0% | |
| GGGTTTCATCATTCATGTCA+TGG | + | chr1.3:58833492-58833511 | None:intergenic | 40.0% | |
| TAACCGACCATCATCTGTAA+AGG | + | chr1.3:58831779-58831798 | None:intergenic | 40.0% | |
| TCATCATTTGCCTCCAAAGA+AGG | - | chr1.3:58832861-58832880 | MS.gene44126:intron | 40.0% | |
| TGTCACATTTGTAGATGAGG+AGG | - | chr1.3:58833226-58833245 | MS.gene44126:intron | 40.0% | |
| TGTTCTCGTTGTAAAAGGCA+TGG | - | chr1.3:58833164-58833183 | MS.gene44126:intron | 40.0% | |
| TTCCATCTTGCAAATCCATG+TGG | + | chr1.3:58833810-58833829 | None:intergenic | 40.0% | |
| TTGTAGAATGGTATGCCACA+TGG | - | chr1.3:58833792-58833811 | MS.gene44126:CDS | 40.0% | |
| TTTACAGGATTCAACCACCA+TGG | - | chr1.3:58831913-58831932 | MS.gene44126:intron | 40.0% | |
| ! | ATTTGGAGTCACAGAAGCAT+CGG | + | chr1.3:58833656-58833675 | None:intergenic | 40.0% |
| ! | CCTTTGGGTTTAGCATTATC+TGG | + | chr1.3:58833089-58833108 | None:intergenic | 40.0% |
| ! | GGTTTCTTAATGGGCCAAAA+AGG | - | chr1.3:58831601-58831620 | MS.gene44126:CDS | 40.0% |
| ! | GTTAGTGGTTTGCATTCTCA+AGG | - | chr1.3:58831556-58831575 | MS.gene44126:CDS | 40.0% |
| ! | TGCATTCAATAGGCTTTGTG+AGG | - | chr1.3:58832932-58832951 | MS.gene44126:intron | 40.0% |
| ! | TTCTTAATGGGCCAAAAAGG+AGG | - | chr1.3:58831604-58831623 | MS.gene44126:CDS | 40.0% |
| !! | AGAAAGTGTCCAATACTTGC+TGG | - | chr1.3:58833197-58833216 | MS.gene44126:intron | 40.0% |
| !! | GATTATGAGGAAGCTTTGGA+AGG | - | chr1.3:58832975-58832994 | MS.gene44126:intron | 40.0% |
| !! | TTCATTTTAGGGGCTCCTTT+GGG | + | chr1.3:58833104-58833123 | None:intergenic | 40.0% |
| !! | TTTCATTTTAGGGGCTCCTT+TGG | + | chr1.3:58833105-58833124 | None:intergenic | 40.0% |
| AAAGCGTATGCTCGTTTCCA+TGG | - | chr1.3:58831238-58831257 | MS.gene44126:CDS | 45.0% | |
| AAATGGTCGTTTCACCATGG+TGG | + | chr1.3:58831930-58831949 | None:intergenic | 45.0% | |
| AAGAGAGATGGTGACAAAGC+CGG | - | chr1.3:58833571-58833590 | MS.gene44126:CDS | 45.0% | |
| AAGCGTATGCTCGTTTCCAT+GGG | - | chr1.3:58831239-58831258 | MS.gene44126:CDS | 45.0% | |
| AATAGGCAAACCATGCGAAC+TGG | - | chr1.3:58831379-58831398 | MS.gene44126:intron | 45.0% | |
| ACAGTTTACGAGCGTGTTGA+AGG | - | chr1.3:58834070-58834089 | MS.gene44126:CDS | 45.0% | |
| ACGAGGGAAAAATTGTTGCG+CGG | - | chr1.3:58831296-58831315 | MS.gene44126:CDS | 45.0% | |
| AGAGGATGAGAAGGAATACG+AGG | - | chr1.3:58833286-58833305 | MS.gene44126:intron | 45.0% | |
| AGCTATGGAGTTTAGCACAG+AGG | - | chr1.3:58831195-58831214 | MS.gene44126:CDS | 45.0% | |
| ATTTGTAGATGAGGAGGAGG+AGG | - | chr1.3:58833232-58833251 | MS.gene44126:intron | 45.0% | |
| CAAAGGCGATGCCTTGAATT+CGG | + | chr1.3:58832099-58832118 | None:intergenic | 45.0% | |
| CAAGATGGAACCATGGTGTT+GGG | - | chr1.3:58833820-58833839 | MS.gene44126:CDS | 45.0% | |
| CACATTTGTAGATGAGGAGG+AGG | - | chr1.3:58833229-58833248 | MS.gene44126:intron | 45.0% | |
| CACTATTTCCAACCTCAGCA+TGG | + | chr1.3:58832626-58832645 | None:intergenic | 45.0% | |
| CACTTACCGCTGCATTCAAT+AGG | - | chr1.3:58832922-58832941 | MS.gene44126:intron | 45.0% | |
| CCAAAAGCGATTGTTACCGA+TGG | - | chr1.3:58832036-58832055 | MS.gene44126:CDS | 45.0% | |
| CCCAAAAAGCTGCATCTTTC+CGG | + | chr1.3:58832671-58832690 | None:intergenic | 45.0% | |
| GAAGGAGAAAGAGGATGAGA+AGG | - | chr1.3:58833277-58833296 | MS.gene44126:intron | 45.0% | |
| GATGTGGTAAAGGATCACGA+GGG | - | chr1.3:58831280-58831299 | MS.gene44126:CDS | 45.0% | |
| GGAAGGGTTAGAATTGAAGG+TGG | - | chr1.3:58831682-58831701 | MS.gene44126:intron | 45.0% | |
| GGATTTGCAAGATGGAACCA+TGG | - | chr1.3:58833813-58833832 | MS.gene44126:CDS | 45.0% | |
| GTTTCCATGGGTTTGTCGTA+AGG | - | chr1.3:58831251-58831270 | MS.gene44126:CDS | 45.0% | |
| TACCAACATACCCAACACCA+TGG | + | chr1.3:58833833-58833852 | None:intergenic | 45.0% | |
| TACGGTGGGATTCCAAATGT+GGG | - | chr1.3:58833876-58833895 | MS.gene44126:CDS | 45.0% | |
| TGATGTGGTAAAGGATCACG+AGG | - | chr1.3:58831279-58831298 | MS.gene44126:CDS | 45.0% | |
| TGCCACATGGATTTGCAAGA+TGG | - | chr1.3:58833805-58833824 | MS.gene44126:CDS | 45.0% | |
| TGTCATGGCTTATAGACACC+TGG | + | chr1.3:58833477-58833496 | None:intergenic | 45.0% | |
| TGTCGTAAGGAAGGATGATG+TGG | - | chr1.3:58831264-58831283 | MS.gene44126:CDS | 45.0% | |
| ! | AACCATGGTGTTGGGTATGT+TGG | - | chr1.3:58833828-58833847 | MS.gene44126:CDS | 45.0% |
| ! | ACCGGAAAGATGCAGCTTTT+TGG | - | chr1.3:58832667-58832686 | MS.gene44126:CDS | 45.0% |
| ! | ATGCGAGACCATTTTGTGTG+TGG | - | chr1.3:58832321-58832340 | MS.gene44126:CDS | 45.0% |
| ! | CCATCGGTAACAATCGCTTT+TGG | + | chr1.3:58832039-58832058 | None:intergenic | 45.0% |
| ! | CCGGAAAGATGCAGCTTTTT+GGG | - | chr1.3:58832668-58832687 | MS.gene44126:CDS | 45.0% |
| !! | TTTCCCGCTTTTCCTGTGTA+CGG | - | chr1.3:58833858-58833877 | MS.gene44126:CDS | 45.0% |
| AAATGGTCATGTTCCGCCGA+TGG | - | chr1.3:58832898-58832917 | MS.gene44126:intron | 50.0% | |
| AATGGTCATGTTCCGCCGAT+GGG | - | chr1.3:58832899-58832918 | MS.gene44126:intron | 50.0% | |
| AGATGAGGAGGAGGAGGAAA+AGG | - | chr1.3:58833238-58833257 | MS.gene44126:intron | 50.0% | |
| AGCAAGACATCCAGTTCGCA+TGG | + | chr1.3:58831392-58831411 | None:intergenic | 50.0% | |
| ATCTGTCACTCACCATGCTG+AGG | - | chr1.3:58832611-58832630 | MS.gene44126:CDS | 50.0% | |
| CCATGGGTTTGTCGTAAGGA+AGG | - | chr1.3:58831255-58831274 | MS.gene44126:CDS | 50.0% | |
| CCTTCCTTACGACAAACCCA+TGG | + | chr1.3:58831258-58831277 | None:intergenic | 50.0% | |
| CGTCGTGAGGGAAATGTCAA+TGG | - | chr1.3:58833029-58833048 | MS.gene44126:intron | 50.0% | |
| GAAGCTTCACGCTCAAATCC+AGG | + | chr1.3:58832528-58832547 | None:intergenic | 50.0% | |
| GCAAGATGGAACCATGGTGT+TGG | - | chr1.3:58833819-58833838 | MS.gene44126:CDS | 50.0% | |
| GGATGAGAAGGAATACGAGG+AGG | - | chr1.3:58833289-58833308 | MS.gene44126:intron | 50.0% | |
| GGCAAGGAAGTTGTCAACAC+AGG | + | chr1.3:58832507-58832526 | None:intergenic | 50.0% | |
| GTACGGTGGGATTCCAAATG+TGG | - | chr1.3:58833875-58833894 | MS.gene44126:CDS | 50.0% | |
| TACGAGCGTGTTGAAGGACA+TGG | - | chr1.3:58834076-58834095 | MS.gene44126:CDS | 50.0% | |
| TTCACGCTCAAATCCAGGCA+AGG | + | chr1.3:58832523-58832542 | None:intergenic | 50.0% | |
| TTTGGGCAGATTCTGCAAGC+AGG | - | chr1.3:58831809-58831828 | MS.gene44126:intron | 50.0% | |
| ! | GTGTTGACAACTTCCTTGCC+TGG | - | chr1.3:58832507-58832526 | MS.gene44126:CDS | 50.0% |
| ! | TGTGATGGAAGGATGTCTGC+CGG | + | chr1.3:58833927-58833946 | None:intergenic | 50.0% |
| ! | TTTGGAATCCCACCGTACAC+AGG | + | chr1.3:58833873-58833892 | None:intergenic | 50.0% |
| !! | CAAGGCATCGCCTTTGTTCA+TGG | - | chr1.3:58832103-58832122 | MS.gene44126:CDS | 50.0% |
| ATGCAGCGGTAAGTGCCCAT+CGG | + | chr1.3:58832917-58832936 | None:intergenic | 55.0% | |
| ATGGAAGGATGTCTGCCGGA+GGG | + | chr1.3:58833923-58833942 | None:intergenic | 55.0% | |
| CAAAGATGCAGAGGAGGAGG+TGG | - | chr1.3:58833313-58833332 | MS.gene44126:intron | 55.0% | |
| CCACCGTACACAGGAAAAGC+GGG | + | chr1.3:58833864-58833883 | None:intergenic | 55.0% | |
| CCCACCGTACACAGGAAAAG+CGG | + | chr1.3:58833865-58833884 | None:intergenic | 55.0% | |
| CGAGGAGGACAAAGATGCAG+AGG | - | chr1.3:58833304-58833323 | MS.gene44126:intron | 55.0% | |
| GGACAAAGATGCAGAGGAGG+AGG | - | chr1.3:58833310-58833329 | MS.gene44126:intron | 55.0% | |
| GGAGGACAAAGATGCAGAGG+AGG | - | chr1.3:58833307-58833326 | MS.gene44126:intron | 55.0% | |
| GGTGGGATTCCAAATGTGGG+TGG | - | chr1.3:58833879-58833898 | MS.gene44126:CDS | 55.0% | |
| GTCACTCACCATGCTGAGGT+TGG | - | chr1.3:58832615-58832634 | MS.gene44126:CDS | 55.0% | |
| !! | CCGCTTTTCCTGTGTACGGT+GGG | - | chr1.3:58833862-58833881 | MS.gene44126:CDS | 55.0% |
| AGATGCAGAGGAGGAGGTGG+AGG | - | chr1.3:58833316-58833335 | MS.gene44126:intron | 60.0% | |
| GATGGAAGGATGTCTGCCGG+AGG | + | chr1.3:58833924-58833943 | None:intergenic | 60.0% | |
| !! | CCCGCTTTTCCTGTGTACGG+TGG | - | chr1.3:58833861-58833880 | MS.gene44126:CDS | 60.0% |
| AGAGGAGGAGGTGGAGGAGG+AGG | - | chr1.3:58833322-58833341 | MS.gene44126:intron | 65.0% | |
| CAGCGGTAAGTGCCCATCGG+CGG | + | chr1.3:58832914-58832933 | None:intergenic | 65.0% | |
| TGCAGAGGAGGAGGTGGAGG+AGG | - | chr1.3:58833319-58833338 | MS.gene44126:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 58831040 | 58834136 | 58831040 | ID=MS.gene44126 |
| chr1.3 | mRNA | 58831040 | 58834136 | 58831040 | ID=MS.gene44126.t1;Parent=MS.gene44126 |
| chr1.3 | exon | 58833382 | 58834136 | 58833382 | ID=MS.gene44126.t1.exon1;Parent=MS.gene44126.t1 |
| chr1.3 | CDS | 58833382 | 58834136 | 58833382 | ID=cds.MS.gene44126.t1;Parent=MS.gene44126.t1 |
| chr1.3 | exon | 58832028 | 58832733 | 58832028 | ID=MS.gene44126.t1.exon2;Parent=MS.gene44126.t1 |
| chr1.3 | CDS | 58832028 | 58832733 | 58832028 | ID=cds.MS.gene44126.t1;Parent=MS.gene44126.t1 |
| chr1.3 | exon | 58831480 | 58831698 | 58831480 | ID=MS.gene44126.t1.exon3;Parent=MS.gene44126.t1 |
| chr1.3 | CDS | 58831480 | 58831698 | 58831480 | ID=cds.MS.gene44126.t1;Parent=MS.gene44126.t1 |
| chr1.3 | exon | 58831193 | 58831378 | 58831193 | ID=MS.gene44126.t1.exon4;Parent=MS.gene44126.t1 |
| chr1.3 | CDS | 58831193 | 58831378 | 58831193 | ID=cds.MS.gene44126.t1;Parent=MS.gene44126.t1 |
| chr1.3 | exon | 58831040 | 58831102 | 58831040 | ID=MS.gene44126.t1.exon5;Parent=MS.gene44126.t1 |
| chr1.3 | CDS | 58831040 | 58831102 | 58831040 | ID=cds.MS.gene44126.t1;Parent=MS.gene44126.t1 |
| Gene Sequence |
| Protein sequence |
