AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44416

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44416.t1 MTR_4g097950 91.707 205 14 2 2 205 26 228 2.30e-119 339
MS.gene44416.t1 MTR_5g014600 53.922 204 84 4 6 205 116 313 3.77e-58 186
MS.gene44416.t1 MTR_5g014520 48.309 207 91 5 2 205 115 308 7.22e-47 157
MS.gene44416.t1 MTR_2g010450 53.704 162 65 4 45 205 177 329 1.52e-46 157
MS.gene44416.t1 MTR_4g092700 56.790 162 59 4 45 205 158 309 4.71e-46 155
MS.gene44416.t1 MTR_5g014560 47.929 169 79 3 37 205 123 282 2.15e-41 142
MS.gene44416.t1 MTR_4g009540 44.670 197 98 4 15 205 118 309 3.25e-41 142
MS.gene44416.t1 MTR_0246s0020 44.292 219 99 7 3 205 142 353 6.32e-41 143
MS.gene44416.t1 MTR_0246s0020 44.292 219 99 7 3 205 142 353 6.86e-41 142
MS.gene44416.t1 MTR_4g009540 44.670 197 98 4 15 205 118 309 6.90e-41 141
MS.gene44416.t1 MTR_0250s0040 45.294 170 82 3 37 205 80 239 1.69e-40 139
MS.gene44416.t1 MTR_6g047570 45.294 170 82 3 37 205 151 310 4.72e-38 134
MS.gene44416.t1 MTR_4g097940 46.061 165 70 4 45 205 155 304 5.26e-37 131
MS.gene44416.t1 MTR_0011s0210 46.914 162 75 3 45 205 183 334 7.36e-37 132
MS.gene44416.t1 MTR_0011s0260 47.531 162 74 3 45 205 183 334 1.32e-36 131
MS.gene44416.t1 MTR_4g067010 44.643 168 73 3 42 205 144 295 7.12e-36 128
MS.gene44416.t1 MTR_4g009110 45.062 162 81 3 45 205 174 328 9.55e-36 129
MS.gene44416.t1 MTR_4g066460 45.294 170 81 2 36 205 146 303 2.79e-35 127
MS.gene44416.t1 MTR_2g104550 42.500 200 100 6 8 205 104 290 5.80e-35 125
MS.gene44416.t1 MTR_4g097920 43.827 162 78 3 45 205 140 289 1.28e-33 122
MS.gene44416.t1 MTR_4g097920 43.827 162 78 3 45 205 155 304 1.85e-33 122
MS.gene44416.t1 MTR_2g104490 44.886 176 83 6 31 205 124 286 7.73e-33 120
MS.gene44416.t1 MTR_2g104490 44.886 176 83 6 31 205 124 286 9.02e-33 120
MS.gene44416.t1 MTR_0246s0050 40.984 183 89 3 24 205 131 295 3.51e-32 119
MS.gene44416.t1 MTR_4g098035 41.530 183 88 3 24 205 152 316 6.62e-32 118
MS.gene44416.t1 MTR_4g066380 44.118 170 82 2 36 205 144 300 1.12e-30 115
MS.gene44416.t1 MTR_8g009020 43.293 164 85 3 45 205 143 301 8.56e-30 112
MS.gene44416.t1 MTR_2g104500 35.938 192 108 2 14 205 74 250 1.61e-29 110
MS.gene44416.t1 MTR_5g014640 38.202 178 98 1 28 205 137 302 1.86e-29 111
MS.gene44416.t1 MTR_2g104560 39.394 165 79 4 46 205 55 203 5.38e-28 105
MS.gene44416.t1 MTR_2g104530 37.888 161 85 2 46 205 106 252 1.03e-25 100
MS.gene44416.t1 MTR_8g069740 37.805 164 93 3 43 205 110 265 1.48e-24 97.4
MS.gene44416.t1 MTR_5g014550 45.038 131 63 2 75 205 54 175 1.60e-24 95.9
MS.gene44416.t1 MTR_7g080780 37.888 161 82 1 45 205 152 294 2.44e-24 98.2
MS.gene44416.t1 MTR_7g080780 37.888 161 82 1 45 205 165 307 3.38e-24 97.8
MS.gene44416.t1 MTR_6g047550 56.322 87 38 0 26 112 154 240 5.02e-24 96.3
MS.gene44416.t1 MTR_8g064700 32.402 179 117 2 25 203 224 398 7.36e-23 95.1
MS.gene44416.t1 MTR_2g104590 36.667 180 85 6 28 205 50 202 2.63e-21 88.2
MS.gene44416.t1 MTR_2g104650 36.264 182 103 4 25 205 78 247 1.64e-19 84.3
MS.gene44416.t1 MTR_8g009010 35.802 162 58 2 45 205 134 250 2.78e-19 84.3
MS.gene44416.t1 MTR_8g067280 35.762 151 87 3 45 189 462 608 1.15e-16 78.2
MS.gene44416.t1 MTR_7g117670 54.237 59 27 0 45 103 402 460 5.73e-16 75.9
MS.gene44416.t1 MTR_8g027495 55.357 56 25 0 45 100 458 513 3.14e-15 73.9
MS.gene44416.t1 MTR_8g024790 35.507 138 77 4 30 165 276 403 3.88e-15 73.6
MS.gene44416.t1 MTR_7g096350 55.556 54 24 0 45 98 355 408 6.45e-15 72.8
MS.gene44416.t1 MTR_5g030430 32.000 150 94 3 45 189 493 639 2.00e-14 71.6
MS.gene44416.t1 MTR_8g024770 33.566 143 79 4 31 162 254 391 3.04e-14 70.9
MS.gene44416.t1 MTR_1g072320 46.032 63 34 0 45 107 470 532 6.56e-14 70.1
MS.gene44416.t1 MTR_7g451650 34.783 138 71 4 68 205 57 175 8.75e-14 67.4
MS.gene44416.t1 MTR_7g451650 34.783 138 71 4 68 205 57 175 1.12e-13 67.0
MS.gene44416.t1 MTR_4g009510 31.902 163 89 4 44 205 42 183 2.00e-13 66.6
MS.gene44416.t1 MTR_3g030700 30.247 162 103 3 47 205 198 352 2.38e-13 68.2
MS.gene44416.t1 MTR_4g009420 31.884 138 67 2 68 205 65 175 2.52e-13 66.2
MS.gene44416.t1 MTR_4g009420 31.333 150 75 3 56 205 54 175 2.62e-13 66.2
MS.gene44416.t1 MTR_3g498695 27.273 198 116 6 13 200 275 454 7.91e-13 66.6
MS.gene44416.t1 MTR_3g498695 27.273 198 116 6 13 200 275 454 8.13e-13 66.6
MS.gene44416.t1 MTR_2g084280 31.111 135 81 2 47 181 135 257 1.37e-12 65.5
MS.gene44416.t1 MTR_2g081040 30.435 161 99 4 47 200 179 333 1.38e-12 65.9
MS.gene44416.t1 MTR_7g050350 34.091 132 68 4 74 205 1 113 1.60e-12 62.8
MS.gene44416.t1 MTR_7g451650 34.091 132 68 4 74 205 1 113 1.60e-12 62.8
MS.gene44416.t1 MTR_7g083900 27.673 159 108 3 47 200 288 444 2.19e-12 65.5
MS.gene44416.t1 MTR_7g083900 27.673 159 108 3 47 200 288 444 2.36e-12 65.5
MS.gene44416.t1 MTR_3g104100 27.950 161 103 3 47 200 197 351 2.99e-12 65.1
MS.gene44416.t1 MTR_1g080890 34.951 103 60 1 43 145 201 296 1.51e-11 62.8
MS.gene44416.t1 MTR_4g131160 34.228 149 79 5 43 186 204 338 2.41e-11 62.4
MS.gene44416.t1 MTR_4g131160 34.228 149 79 5 43 186 207 341 2.42e-11 62.4
MS.gene44416.t1 MTR_4g057270 26.250 160 102 4 47 202 151 298 2.58e-11 62.0
MS.gene44416.t1 MTR_1g112680 44.068 59 33 0 47 105 319 377 2.73e-11 62.4
MS.gene44416.t1 MTR_2g038040 28.144 167 106 5 46 203 53 214 4.09e-11 60.8
MS.gene44416.t1 MTR_7g110810 53.846 52 24 0 46 97 213 264 8.06e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44416.t1 AT4G37850 49.171 181 83 4 25 205 133 304 5.54e-46 155
MS.gene44416.t1 AT4G37850 49.171 181 83 4 25 205 133 304 5.54e-46 155
MS.gene44416.t1 AT2G22750 53.416 161 70 3 45 205 126 281 5.55e-37 130
MS.gene44416.t1 AT2G22750 53.416 161 70 3 45 205 126 281 5.91e-37 130
MS.gene44416.t1 AT2G22750 53.416 161 70 3 45 205 154 309 9.94e-37 130
MS.gene44416.t1 AT2G22750 53.416 161 70 3 45 205 154 309 1.01e-36 130
MS.gene44416.t1 AT2G22750 53.416 161 70 3 45 205 150 305 1.07e-36 130
MS.gene44416.t1 AT2G22760 41.111 180 92 4 33 205 101 273 1.73e-34 124
MS.gene44416.t1 AT2G22760 41.111 180 92 4 33 205 101 273 1.91e-34 124
MS.gene44416.t1 AT2G22770 39.181 171 98 2 41 205 128 298 1.78e-30 114
MS.gene44416.t1 AT2G46510 58.929 56 23 0 45 100 395 450 1.33e-17 80.9
MS.gene44416.t1 AT5G46760 34.437 151 82 4 45 189 415 554 5.96e-17 79.0
MS.gene44416.t1 AT4G29930 29.798 198 108 6 34 205 33 225 6.41e-16 74.3
MS.gene44416.t1 AT4G29930 29.798 198 108 6 34 205 33 225 6.41e-16 74.3
MS.gene44416.t1 AT4G29930 29.798 198 108 6 34 205 33 225 7.28e-16 73.9
MS.gene44416.t1 AT1G01260 31.293 147 64 3 45 188 433 545 1.60e-15 74.7
MS.gene44416.t1 AT1G01260 31.293 147 64 3 45 188 433 545 1.60e-15 74.7
MS.gene44416.t1 AT1G01260 31.293 147 64 3 45 188 433 545 1.60e-15 74.7
MS.gene44416.t1 AT2G16910 29.193 161 101 3 46 193 315 475 4.11e-15 73.6
MS.gene44416.t1 AT1G32640 62.000 50 19 0 45 94 452 501 1.07e-14 72.4
MS.gene44416.t1 AT4G17880 32.468 154 77 3 45 189 416 551 2.46e-14 71.2
MS.gene44416.t1 AT5G58010 34.459 148 80 4 43 186 107 241 2.96e-14 70.1
MS.gene44416.t1 AT4G29930 29.851 201 101 8 23 205 18 196 1.14e-13 67.8
MS.gene44416.t1 AT4G29930 28.108 185 102 5 34 205 33 199 1.19e-13 67.8
MS.gene44416.t1 AT4G29930 30.108 186 94 7 34 205 33 196 1.50e-13 67.4
MS.gene44416.t1 AT4G16430 50.000 54 27 0 45 98 320 373 2.09e-13 68.6
MS.gene44416.t1 AT1G12860 30.000 160 99 3 46 200 268 419 3.91e-13 67.8
MS.gene44416.t1 AT1G12860 30.000 160 99 3 46 200 268 419 4.53e-13 67.4
MS.gene44416.t1 AT4G09820 27.536 138 71 2 46 183 364 472 6.76e-13 67.0
MS.gene44416.t1 AT5G57150 30.000 150 101 3 46 192 56 204 1.43e-12 64.7
MS.gene44416.t1 AT5G57150 30.000 150 101 3 46 192 56 204 1.45e-12 64.7
MS.gene44416.t1 AT5G57150 30.000 150 101 3 46 192 55 203 1.54e-12 64.3
MS.gene44416.t1 AT5G57150 30.000 150 101 3 46 192 56 204 2.00e-12 64.7
MS.gene44416.t1 AT5G57150 30.000 150 101 3 46 192 55 203 2.40e-12 64.3
MS.gene44416.t1 AT2G24260 43.299 97 44 2 43 131 43 136 8.75e-12 62.8
MS.gene44416.t1 AT4G29930 34.737 95 60 1 47 141 56 148 9.17e-12 61.6
MS.gene44416.t1 AT5G46830 50.000 54 27 0 45 98 343 396 1.05e-11 63.5
MS.gene44416.t1 AT2G28160 28.125 160 80 4 47 192 133 271 1.84e-11 62.4
MS.gene44416.t1 AT1G63650 26.590 173 117 4 39 202 399 570 1.84e-11 62.8
MS.gene44416.t1 AT1G63650 26.590 173 117 4 39 202 399 570 1.84e-11 62.8
MS.gene44416.t1 AT1G63650 26.590 173 117 4 39 202 399 570 1.84e-11 62.8
MS.gene44416.t1 AT2G28160 28.125 160 80 4 47 192 133 271 1.90e-11 62.4
MS.gene44416.t1 AT5G41315 27.586 174 111 3 43 202 444 616 2.49e-11 62.4
MS.gene44416.t1 AT5G41315 27.586 174 111 3 43 202 447 619 2.52e-11 62.4
MS.gene44416.t1 AT2G24260 43.299 97 44 2 43 131 146 239 2.80e-11 62.0
MS.gene44416.t1 AT5G41315 27.586 174 111 3 43 202 439 611 2.84e-11 62.4
MS.gene44416.t1 AT4G00870 33.000 100 65 1 5 102 207 306 3.15e-11 62.0

Find 46 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTTGGTTCCTCTGCTT+TGG 0.281353 8.2:+24097360 MS.gene44416:CDS
ATATAATTGCTGAGAGAATA+AGG 0.332685 8.2:+24096527 MS.gene44416:CDS
CCTTATTCCAAACCTCAAAA+AGG 0.354140 8.2:+24096588 MS.gene44416:CDS
TCCTGATTCTTTACACGTCT+TGG 0.356377 8.2:-24096448 None:intergenic
CGGGGAAGAATGTGCTGATT+AGG 0.377824 8.2:+24097248 MS.gene44416:CDS
GAAGTTAAAGCTAGTTTGTC+GGG 0.404928 8.2:+24097229 MS.gene44416:CDS
AATTTCTTCACAACCGTAAC+CGG 0.405974 8.2:-24097109 None:intergenic
AATAGAGAAACTTGGTCTCT+TGG 0.416449 8.2:+24097318 MS.gene44416:CDS
AAGGTTGGTACAACCTTCAT+TGG 0.432513 8.2:-24096388 None:intergenic
CTCTCAGCAATTATATGATC+TGG 0.438168 8.2:-24096520 None:intergenic
ATTCTTTGAGTTCACAACTT+TGG 0.438205 8.2:-24096422 None:intergenic
GACAAACTAGCTTTAACTTC+AGG 0.442233 8.2:-24097226 None:intergenic
GTCTGCGGATGTCAATGTTT+CGG 0.442533 8.2:+24097141 MS.gene44416:CDS
CAAAAGCAAAAGTGTAGAAC+CGG 0.446629 8.2:+24097090 MS.gene44416:CDS
ACCAAGACGTGTAAAGAATC+AGG 0.456019 8.2:+24096447 MS.gene44416:CDS
ATGGACAAGGCCTCAGTGTT+GGG 0.461686 8.2:+24097007 MS.gene44416:CDS
GTTTCCATTACATGAATTTG+AGG 0.464190 8.2:-24097170 None:intergenic
AAAGTATGTGAAGGAGCTTA+AGG 0.470002 8.2:+24097039 MS.gene44416:CDS
CAAAAGTGTAGAACCGGTTA+CGG 0.471591 8.2:+24097096 MS.gene44416:CDS
ACTTCCTCAAATTCATGTAA+TGG 0.472899 8.2:+24097166 MS.gene44416:CDS
GGCCATAACCATCATTGCTC+AGG 0.477071 8.2:+24097381 MS.gene44416:CDS
TGTGTGATGAGTTGTAGATT+TGG 0.488926 8.2:-24096497 None:intergenic
AGCAGAGGAACCAAATGAAA+AGG 0.489144 8.2:-24097356 None:intergenic
AAAATGTACCTGAGCAATGA+TGG 0.489397 8.2:-24097389 None:intergenic
GGAACCAAATGAAAAGGAAC+TGG 0.490603 8.2:-24097350 None:intergenic
AAAGTTGTGAACTCAAAGAA+TGG 0.494937 8.2:+24096424 MS.gene44416:CDS
TGAGAAAGATAAGGCAGTGA+TGG 0.525707 8.2:+24097279 MS.gene44416:CDS
TAAGGAACAAGTAAAACTGT+TGG 0.530262 8.2:+24097057 MS.gene44416:CDS
CTGAAAGAGCTATGAACTGT+TGG 0.532934 8.2:-24096564 None:intergenic
TGAAGTTAAAGCTAGTTTGT+CGG 0.533689 8.2:+24097228 MS.gene44416:CDS
GAGAAAGATAAGGCAGTGAT+GGG 0.538793 8.2:+24097280 MS.gene44416:CDS
GGAACAAGTAAAACTGTTGG+AGG 0.550452 8.2:+24097060 MS.gene44416:CDS
TATAGAGAAATAGAGAAACT+TGG 0.574558 8.2:+24097310 MS.gene44416:CDS
TACCTGAGCAATGATGGTTA+TGG 0.585304 8.2:-24097383 None:intergenic
GATGGACAAGGCCTCAGTGT+TGG 0.588121 8.2:+24097006 MS.gene44416:intron
GATCCTCTGTGAGAAAGATA+AGG 0.589750 8.2:+24097270 MS.gene44416:CDS
GATGGTTATGGCCAAAGCAG+AGG 0.622453 8.2:-24097371 None:intergenic
CAGGAGAGCAACAAGAAGAA+CGG 0.634139 8.2:+24096466 MS.gene44416:CDS
AAGTTAAAGCTAGTTTGTCG+GGG 0.643559 8.2:+24097230 MS.gene44416:CDS
GAAATTGTCTGAACTGTCTG+CGG 0.654800 8.2:+24097126 MS.gene44416:CDS
TGAAGGTTGTACCAACCTTG+AGG 0.663007 8.2:+24096392 MS.gene44416:CDS
CATATGTTTGTAGATGGACA+AGG 0.664887 8.2:+24096994 MS.gene44416:intron
AGAAAGATAAGGCAGTGATG+GGG 0.666003 8.2:+24097281 MS.gene44416:CDS
CTGCCTTATCTTTCTCACAG+AGG 0.691029 8.2:-24097273 None:intergenic
TGATGCTATAAAGTATGTGA+AGG 0.702262 8.2:+24097030 MS.gene44416:CDS
TATAGCATCACCCAACACTG+AGG 0.742341 8.2:-24097017 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATATAATTGCTGAGAGAATA+AGG + chr8.2:24096527-24096546 MS.gene44416:CDS 25.0%
! TATAGAGAAATAGAGAAACT+TGG + chr8.2:24097310-24097329 MS.gene44416:CDS 25.0%
!! TTGAAAAATGAACCTTTTTG+AGG - chr8.2:24096603-24096622 None:intergenic 25.0%
AAAGTTGTGAACTCAAAGAA+TGG + chr8.2:24096424-24096443 MS.gene44416:CDS 30.0%
ACACATGATTGATTGTGATT+TGG + chr8.2:24096877-24096896 MS.gene44416:intron 30.0%
ACTTCCTCAAATTCATGTAA+TGG + chr8.2:24097166-24097185 MS.gene44416:CDS 30.0%
GATTGATTGCGATTTATTGA+CGG + chr8.2:24096937-24096956 MS.gene44416:intron 30.0%
GTTTCCATTACATGAATTTG+AGG - chr8.2:24097173-24097192 None:intergenic 30.0%
TAAGGAACAAGTAAAACTGT+TGG + chr8.2:24097057-24097076 MS.gene44416:CDS 30.0%
TGATGCTATAAAGTATGTGA+AGG + chr8.2:24097030-24097049 MS.gene44416:CDS 30.0%
! ATTCTTTGAGTTCACAACTT+TGG - chr8.2:24096425-24096444 None:intergenic 30.0%
! TGAAGTTAAAGCTAGTTTGT+CGG + chr8.2:24097228-24097247 MS.gene44416:CDS 30.0%
!! GACTCGAACTATATTTTTGT+GGG + chr8.2:24096636-24096655 MS.gene44416:intron 30.0%
!! TGACTCGAACTATATTTTTG+TGG + chr8.2:24096635-24096654 MS.gene44416:intron 30.0%
!!! AAATGAACCTTTTTGAGGTT+TGG - chr8.2:24096598-24096617 None:intergenic 30.0%
!!! CTTTTTGAGGTTTGGAATAA+GGG - chr8.2:24096590-24096609 None:intergenic 30.0%
AAAGTATGTGAAGGAGCTTA+AGG + chr8.2:24097039-24097058 MS.gene44416:CDS 35.0%
AATAGAGAAACTTGGTCTCT+TGG + chr8.2:24097318-24097337 MS.gene44416:CDS 35.0%
AATTTCTTCACAACCGTAAC+CGG - chr8.2:24097112-24097131 None:intergenic 35.0%
CATATGTTTGTAGATGGACA+AGG + chr8.2:24096994-24097013 MS.gene44416:intron 35.0%
CCTTATTCCAAACCTCAAAA+AGG + chr8.2:24096588-24096607 MS.gene44416:CDS 35.0%
CTCTCAGCAATTATATGATC+TGG - chr8.2:24096523-24096542 None:intergenic 35.0%
CTTGTCCATCTACAAACATA+TGG - chr8.2:24096996-24097015 None:intergenic 35.0%
GTACTCCATATGTTTGTAGA+TGG + chr8.2:24096988-24097007 MS.gene44416:intron 35.0%
TGTGTGATGAGTTGTAGATT+TGG - chr8.2:24096500-24096519 None:intergenic 35.0%
! AAGTTAAAGCTAGTTTGTCG+GGG + chr8.2:24097230-24097249 MS.gene44416:CDS 35.0%
! AATGCCAGTTCCTTTTCATT+TGG + chr8.2:24097346-24097365 MS.gene44416:CDS 35.0%
! CAAAAGCAAAAGTGTAGAAC+CGG + chr8.2:24097090-24097109 MS.gene44416:CDS 35.0%
! GAAGTTAAAGCTAGTTTGTC+GGG + chr8.2:24097229-24097248 MS.gene44416:CDS 35.0%
!! GACAAACTAGCTTTAACTTC+AGG - chr8.2:24097229-24097248 None:intergenic 35.0%
!!! AACTTTGGTTTTTGACCTCA+AGG - chr8.2:24096410-24096429 None:intergenic 35.0%
!!! CCTTTTTGAGGTTTGGAATA+AGG - chr8.2:24096591-24096610 None:intergenic 35.0%
ACCAAGACGTGTAAAGAATC+AGG + chr8.2:24096447-24096466 MS.gene44416:CDS 40.0%
AGAAAGATAAGGCAGTGATG+GGG + chr8.2:24097281-24097300 MS.gene44416:CDS 40.0%
AGCAGAGGAACCAAATGAAA+AGG - chr8.2:24097359-24097378 None:intergenic 40.0%
CTGAAAGAGCTATGAACTGT+TGG - chr8.2:24096567-24096586 None:intergenic 40.0%
GAAATTGTCTGAACTGTCTG+CGG + chr8.2:24097126-24097145 MS.gene44416:CDS 40.0%
GAGAAAGATAAGGCAGTGAT+GGG + chr8.2:24097280-24097299 MS.gene44416:CDS 40.0%
GATCCTCTGTGAGAAAGATA+AGG + chr8.2:24097270-24097289 MS.gene44416:CDS 40.0%
GGAACAAGTAAAACTGTTGG+AGG + chr8.2:24097060-24097079 MS.gene44416:CDS 40.0%
GGAACCAAATGAAAAGGAAC+TGG - chr8.2:24097353-24097372 None:intergenic 40.0%
TAGATTGTGCGTCAGTCAAT+CGG + chr8.2:24096753-24096772 MS.gene44416:intron 40.0%
TCCTGATTCTTTACACGTCT+TGG - chr8.2:24096451-24096470 None:intergenic 40.0%
TGAGAAAGATAAGGCAGTGA+TGG + chr8.2:24097279-24097298 MS.gene44416:CDS 40.0%
! CAAAAGTGTAGAACCGGTTA+CGG + chr8.2:24097096-24097115 MS.gene44416:CDS 40.0%
! TTCATTTGGTTCCTCTGCTT+TGG + chr8.2:24097360-24097379 MS.gene44416:CDS 40.0%
!! TTGGTTTTTGACCTCAAGGT+TGG - chr8.2:24096406-24096425 None:intergenic 40.0%
CAGGAGAGCAACAAGAAGAA+CGG + chr8.2:24096466-24096485 MS.gene44416:CDS 45.0%
CTGCCTTATCTTTCTCACAG+AGG - chr8.2:24097276-24097295 None:intergenic 45.0%
GTCTGCGGATGTCAATGTTT+CGG + chr8.2:24097141-24097160 MS.gene44416:CDS 45.0%
TATAGCATCACCCAACACTG+AGG - chr8.2:24097020-24097039 None:intergenic 45.0%
TGAAGGTTGTACCAACCTTG+AGG + chr8.2:24096392-24096411 MS.gene44416:CDS 45.0%
ATGGACAAGGCCTCAGTGTT+GGG + chr8.2:24097007-24097026 MS.gene44416:CDS 50.0%
GATGGTTATGGCCAAAGCAG+AGG - chr8.2:24097374-24097393 None:intergenic 50.0%
!! CGGGGAAGAATGTGCTGATT+AGG + chr8.2:24097248-24097267 MS.gene44416:CDS 50.0%
GATGGACAAGGCCTCAGTGT+TGG + chr8.2:24097006-24097025 MS.gene44416:intron 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 24096391 24097402 24096391 ID=MS.gene44416
chr8.2 mRNA 24096391 24097402 24096391 ID=MS.gene44416.t1;Parent=MS.gene44416
chr8.2 exon 24096391 24096609 24096391 ID=MS.gene44416.t1.exon1;Parent=MS.gene44416.t1
chr8.2 CDS 24096391 24096609 24096391 ID=cds.MS.gene44416.t1;Parent=MS.gene44416.t1
chr8.2 exon 24097007 24097402 24097007 ID=MS.gene44416.t1.exon2;Parent=MS.gene44416.t1
chr8.2 CDS 24097007 24097402 24097007 ID=cds.MS.gene44416.t1;Parent=MS.gene44416.t1
Gene Sequence

>MS.gene44416

ATGAAGGTTGTACCAACCTTGAGGTCAAAAACCAAAGTTGTGAACTCAAAGAATGGACCAAGACGTGTAAAGAATCAGGAGAGCAACAAGAAGAACGGTTCATTTTCCAAATCTACAACTCATCACACACCAGATCATATAATTGCTGAGAGAATAAGGAGAGAAAAGATTAGCCAACAGTTCATAGCTCTTTCAGCCCTTATTCCAAACCTCAAAAAGGTTCATTTTTCAATTTATACACATTTGACTCGAACTATATTTTTGTGGGTATGCTAATATGATTCAATTCATATACAATTTGATTACTAAGTTTTTTTTTCTTTAAGATTTAATTTATATTCATTCATAATGTAAAGATTTTTTAGATTGTGCGTCAGTCAATCGGATCAATCATAATCGTTCGATAATTAAAAAAGTTTGACTTTTAATCTTATCATCAGAAACATTTGACTTTATTCTCGTGATTACTTCTAAAATCACGTTGACACACATGATTGATTGTGATTTGGCGTATCAAAATTAAACTACAATCACATTGACACATGTGATTGATTGCGATTTATTGACGGCGTAACAAAATTAAACTATACTAATAATGTACTCCATATGTTTGTAGATGGACAAGGCCTCAGTGTTGGGTGATGCTATAAAGTATGTGAAGGAGCTTAAGGAACAAGTAAAACTGTTGGAGGAGCAAAGCAAAAGCAAAAGTGTAGAACCGGTTACGGTTGTGAAGAAATTGTCTGAACTGTCTGCGGATGTCAATGTTTCGGACACTTCCTCAAATTCATGTAATGGAAACTCTGATGAAACATCAAAAACAAATCTGTCACTACCTGAAGTTAAAGCTAGTTTGTCGGGGAAGAATGTGCTGATTAGGATCCTCTGTGAGAAAGATAAGGCAGTGATGGGGAATGTATATAGAGAAATAGAGAAACTTGGTCTCTTGGTTATCAATGCCAGTTCCTTTTCATTTGGTTCCTCTGCTTTGGCCATAACCATCATTGCTCAG
Protein sequence

>MS.gene44416.t1

MKVVPTLRSKTKVVNSKNGPRRVKNQESNKKNGSFSKSTTHHTPDHIIAERIRREKISQQFIALSALIPNLKKMDKASVLGDAIKYVKELKEQVKLLEEQSKSKSVEPVTVVKKLSELSADVNVSDTSSNSCNGNSDETSKTNLSLPEVKASLSGKNVLIRILCEKDKAVMGNVYREIEKLGLLVINASSFSFGSSALAITIIAQ