AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44417

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44417.t1 MTR_0246s0020 80.000 180 9 1 1 153 201 380 3.49e-93 275
MS.gene44417.t1 MTR_0246s0020 72.093 172 19 2 1 145 201 370 4.03e-75 228
MS.gene44417.t1 MTR_0011s0260 68.391 174 32 2 1 151 186 359 4.06e-74 226
MS.gene44417.t1 MTR_0011s0210 67.614 176 34 2 1 153 186 361 4.36e-73 223
MS.gene44417.t1 MTR_0250s0040 64.571 175 39 2 1 152 91 265 4.95e-72 217
MS.gene44417.t1 MTR_6g047570 63.429 175 41 2 1 152 162 336 3.96e-70 214
MS.gene44417.t1 MTR_0246s0050 64.286 168 44 3 1 152 154 321 3.94e-68 209
MS.gene44417.t1 MTR_4g067010 64.118 170 41 2 1 150 150 319 5.34e-68 209
MS.gene44417.t1 MTR_4g098035 64.286 168 44 3 1 152 175 342 6.63e-68 209
MS.gene44417.t1 MTR_4g066460 62.209 172 45 3 1 152 158 329 4.52e-65 201
MS.gene44417.t1 MTR_4g066380 61.143 175 45 3 1 154 156 328 1.25e-64 201
MS.gene44417.t1 MTR_5g014520 58.621 174 49 2 1 151 160 333 2.88e-61 192
MS.gene44417.t1 MTR_5g014560 54.023 174 57 2 1 151 134 307 8.78e-56 177
MS.gene44417.t1 MTR_4g009540 47.458 177 64 2 1 148 155 331 3.12e-46 153
MS.gene44417.t1 MTR_2g010450 46.857 175 67 4 1 150 180 353 4.25e-44 148
MS.gene44417.t1 MTR_4g009110 46.552 174 67 3 1 148 177 350 1.82e-42 144
MS.gene44417.t1 MTR_5g014600 43.169 183 68 3 1 147 152 334 1.32e-41 141
MS.gene44417.t1 MTR_4g092700 44.253 174 72 4 1 150 161 333 1.57e-38 133
MS.gene44417.t1 MTR_4g009540 47.436 156 53 2 1 127 155 310 2.45e-38 132
MS.gene44417.t1 MTR_2g104490 44.512 164 68 3 1 142 140 302 2.95e-38 132
MS.gene44417.t1 MTR_2g104560 43.023 172 73 6 1 149 57 226 2.19e-37 128
MS.gene44417.t1 MTR_4g097920 42.945 163 72 3 1 142 143 305 3.12e-37 129
MS.gene44417.t1 MTR_4g097920 42.945 163 72 3 1 142 158 320 4.75e-37 129
MS.gene44417.t1 MTR_8g009020 43.678 174 66 4 1 143 146 318 5.73e-37 129
MS.gene44417.t1 MTR_2g104550 41.808 177 75 4 1 151 141 315 1.05e-36 128
MS.gene44417.t1 MTR_4g097940 44.785 163 69 4 1 142 158 320 2.20e-36 128
MS.gene44417.t1 MTR_5g014640 42.169 166 74 4 1 145 157 321 1.46e-35 125
MS.gene44417.t1 MTR_7g080780 42.012 169 80 3 1 155 168 332 2.45e-35 125
MS.gene44417.t1 MTR_7g080780 42.012 169 80 3 1 155 155 319 2.47e-35 125
MS.gene44417.t1 MTR_4g097950 43.956 182 66 4 1 149 73 251 2.33e-34 120
MS.gene44417.t1 MTR_8g009010 46.207 145 62 3 1 143 137 267 5.48e-32 116
MS.gene44417.t1 MTR_2g104500 38.922 167 82 3 1 148 107 272 2.93e-31 113
MS.gene44417.t1 MTR_2g104530 38.650 163 79 3 1 143 108 269 4.25e-31 113
MS.gene44417.t1 MTR_2g104490 42.953 149 62 3 1 127 140 287 2.32e-30 111
MS.gene44417.t1 MTR_2g104650 39.181 171 79 1 1 146 97 267 6.98e-30 110
MS.gene44417.t1 MTR_2g104590 37.086 151 90 2 1 146 72 222 9.31e-29 105
MS.gene44417.t1 MTR_6g047550 78.462 65 14 0 1 65 176 240 6.08e-28 104
MS.gene44417.t1 MTR_4g009510 45.652 138 61 5 21 144 64 201 9.10e-28 102
MS.gene44417.t1 MTR_4g009420 42.857 133 65 3 21 145 65 194 9.20e-28 102
MS.gene44417.t1 MTR_8g069740 37.748 151 69 2 1 126 115 265 1.42e-27 103
MS.gene44417.t1 MTR_7g451650 42.029 138 67 4 21 145 57 194 1.37e-25 97.1
MS.gene44417.t1 MTR_5g014550 46.341 123 41 3 28 126 54 175 9.44e-25 94.7
MS.gene44417.t1 MTR_7g050350 40.909 132 65 4 27 145 1 132 1.79e-24 92.4
MS.gene44417.t1 MTR_7g451650 40.909 132 65 4 27 145 1 132 1.79e-24 92.4
MS.gene44417.t1 MTR_4g009420 40.000 115 58 3 21 127 65 176 2.93e-18 77.8
MS.gene44417.t1 MTR_7g451650 39.167 120 60 4 21 127 57 176 3.03e-16 72.4
MS.gene44417.t1 MTR_8g067280 34.722 144 61 2 2 112 466 609 1.90e-15 72.8
MS.gene44417.t1 MTR_7g117670 31.061 132 77 1 2 119 406 537 2.74e-15 72.4
MS.gene44417.t1 MTR_1g072320 29.545 176 90 4 1 142 473 648 3.24e-15 72.0
MS.gene44417.t1 MTR_8g024790 33.333 126 58 4 2 101 295 420 3.83e-15 71.6
MS.gene44417.t1 MTR_5g030430 34.028 144 62 3 2 112 497 640 8.54e-15 70.9
MS.gene44417.t1 MTR_8g027495 50.000 60 30 0 2 61 462 521 8.35e-14 68.2
MS.gene44417.t1 MTR_7g096350 41.860 86 46 3 2 86 359 441 1.40e-13 67.4
MS.gene44417.t1 MTR_8g024770 55.102 49 22 0 2 50 283 331 4.66e-12 62.8
MS.gene44417.t1 MTR_8g064700 25.658 152 85 3 1 124 247 398 4.76e-11 60.1
MS.gene44417.t1 MTR_1g112680 25.926 162 70 3 1 112 320 481 8.97e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44417.t1 AT4G37850 43.103 174 75 2 1 150 155 328 2.34e-39 135
MS.gene44417.t1 AT4G37850 43.103 174 75 2 1 150 155 328 2.34e-39 135
MS.gene44417.t1 AT2G22760 42.442 172 72 5 1 145 122 293 2.02e-37 130
MS.gene44417.t1 AT2G22750 42.614 176 74 2 1 149 129 304 2.47e-37 130
MS.gene44417.t1 AT2G22750 42.614 176 74 2 1 149 157 332 4.27e-37 130
MS.gene44417.t1 AT2G22750 42.614 176 74 2 1 149 153 328 4.56e-37 129
MS.gene44417.t1 AT2G22750 42.614 176 73 3 1 149 129 303 6.35e-36 126
MS.gene44417.t1 AT2G22750 42.614 176 73 3 1 149 157 331 1.20e-35 126
MS.gene44417.t1 AT2G22770 34.973 183 81 3 1 145 135 317 2.95e-31 114
MS.gene44417.t1 AT2G22760 41.176 153 64 4 1 127 122 274 2.59e-30 111
MS.gene44417.t1 AT1G01260 30.469 128 89 0 2 129 437 564 4.05e-17 77.8
MS.gene44417.t1 AT1G01260 30.469 128 89 0 2 129 437 564 4.05e-17 77.8
MS.gene44417.t1 AT1G01260 30.469 128 89 0 2 129 437 564 4.05e-17 77.8
MS.gene44417.t1 AT4G09820 33.613 119 69 3 1 112 366 481 5.78e-15 71.2
MS.gene44417.t1 AT4G17880 36.719 128 55 4 2 105 420 545 6.73e-15 71.2
MS.gene44417.t1 AT4G16430 34.513 113 69 2 2 112 324 433 8.39e-15 70.9
MS.gene44417.t1 AT2G46510 35.632 87 52 1 2 84 399 485 8.92e-15 70.9
MS.gene44417.t1 AT1G32640 29.333 150 83 2 2 128 456 605 1.51e-13 67.4
MS.gene44417.t1 AT5G46760 34.746 118 49 3 2 91 419 536 1.65e-13 67.4
MS.gene44417.t1 AT1G63650 28.481 158 102 3 1 152 408 560 3.06e-13 66.6
MS.gene44417.t1 AT1G63650 28.481 158 102 3 1 152 408 560 3.06e-13 66.6
MS.gene44417.t1 AT1G63650 28.481 158 102 3 1 152 408 560 3.06e-13 66.6
MS.gene44417.t1 AT4G29930 27.972 143 89 2 1 129 57 199 9.47e-13 63.5
MS.gene44417.t1 AT4G29930 27.660 141 88 2 1 127 57 197 1.72e-12 63.2
MS.gene44417.t1 AT4G29930 28.082 146 88 3 1 129 57 202 3.25e-12 62.4
MS.gene44417.t1 AT1G12860 28.571 133 67 2 1 105 270 402 3.41e-11 60.5
MS.gene44417.t1 AT1G12860 28.571 133 67 2 1 105 270 402 3.89e-11 60.5
MS.gene44417.t1 AT4G00870 46.552 58 31 0 2 59 253 310 4.25e-11 60.1
MS.gene44417.t1 AT5G46830 54.000 50 23 0 2 51 347 396 8.92e-11 59.3

Find 26 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGAATCCCCTTGTGCTTC+TGG 0.171911 8.1:-24662526 None:intergenic
CCAGAAGCACAAGGGGATTC+TGG 0.313026 8.1:+24662526 MS.gene44417:CDS
TCTTGTTCCTAACCTGAAAA+AGG 0.316557 8.1:+24661964 MS.gene44417:CDS
ATAGCAGTGTCTTACCCTTT+GGG 0.356671 8.1:+24662594 MS.gene44417:CDS
AATAGCAGTGTCTTACCCTT+TGG 0.385303 8.1:+24662593 MS.gene44417:CDS
CTGCAAGAGCAATGAAGCTT+TGG 0.405262 8.1:-24661940 None:intergenic
CAGGGAAAGAGATGCTGATT+CGG 0.434047 8.1:+24662495 MS.gene44417:CDS
CAAGTGCAAGCAAAAGTGTC+AGG 0.441082 8.1:+24662476 MS.gene44417:intron
TGACATTACTATCATTGCTC+AGG 0.494765 8.1:+24662625 MS.gene44417:CDS
AGCAATGATAGTAATGTCAA+TGG 0.495292 8.1:-24662621 None:intergenic
TCATCAATGATACTATGGTC+TGG 0.549545 8.1:-24662389 None:intergenic
TAGCAGTGTCTTACCCTTTG+GGG 0.577291 8.1:+24662595 MS.gene44417:CDS
TAAAATTTGGTAGATGGACA+AGG 0.590351 8.1:+24662253 MS.gene44417:intron
ATGTCAATGGAATCCCCAAA+GGG 0.596532 8.1:-24662608 None:intergenic
AGGGTACAACTTGAGCATAA+AGG 0.600355 8.1:+24663601 MS.gene44417:CDS
ACTTCAATGCTGCCATGCGT+AGG 0.601033 8.1:-24663637 None:intergenic
GGGGATTCTGGTGAAAGTCA+TGG 0.606251 8.1:+24662538 MS.gene44417:CDS
GATTCACTGCCAGAAGCACA+AGG 0.606463 8.1:+24662517 MS.gene44417:CDS
TTCACTGCCAGAAGCACAAG+GGG 0.606586 8.1:+24662519 MS.gene44417:CDS
AATGTCAATGGAATCCCCAA+AGG 0.614554 8.1:-24662609 None:intergenic
AAGTGCAAGCAAAAGTGTCA+GGG 0.633121 8.1:+24662477 MS.gene44417:intron
GAAAACAAAGGTAGAGTCCG+TGG 0.640082 8.1:+24662352 MS.gene44417:CDS
TGGTTTCTTCAGAACAACCA+CGG 0.659948 8.1:-24662369 None:intergenic
ATTCACTGCCAGAAGCACAA+GGG 0.669813 8.1:+24662518 MS.gene44417:CDS
AGAACAAAACAAGAAAACAA+AGG 0.679620 8.1:+24662340 MS.gene44417:CDS
ACTTGTCAAGAACCTACGCA+TGG 0.686710 8.1:+24663625 MS.gene44417:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAGTATAGAAATAATTTAT+TGG + chr8.1:24663184-24663203 MS.gene44417:intron 15.0%
!! TCAAATACTGTTATAAAATT+TGG + chr8.1:24662240-24662259 MS.gene44417:intron 15.0%
!! TTTAAACAATGAATATTTAG+TGG - chr8.1:24662683-24662702 None:intergenic 15.0%
!!! AACTTGTTAAGAATAAAAAA+AGG + chr8.1:24662809-24662828 MS.gene44417:intron 15.0%
!!! AAGTATTATTATTTTGTTTG+AGG + chr8.1:24662738-24662757 MS.gene44417:intron 15.0%
!!! ATTAAATGCACAAAATTTTA+AGG + chr8.1:24663245-24663264 MS.gene44417:intron 15.0%
!!! ATTATTACATTTTTTGTCTA+GGG + chr8.1:24662972-24662991 MS.gene44417:intron 15.0%
!! AAGGAATTTATTACCATAAA+AGG + chr8.1:24662828-24662847 MS.gene44417:intron 20.0%
!! ATAATTAATGAAATGCTAAC+CGG - chr8.1:24662945-24662964 None:intergenic 20.0%
!! ATATTTAGTGGCAATTATTA+AGG - chr8.1:24662671-24662690 None:intergenic 20.0%
!!! AACTTGTGTTGTTTTTTTTT+TGG + chr8.1:24663121-24663140 MS.gene44417:intron 20.0%
!!! ATTGTTATACTTTTGTAGAT+GGG + chr8.1:24663575-24663594 MS.gene44417:intron 20.0%
!!! CACTACTTTTTTTTTATATC+AGG + chr8.1:24663320-24663339 MS.gene44417:intron 20.0%
!!! CATTATTACATTTTTTGTCT+AGG + chr8.1:24662971-24662990 MS.gene44417:intron 20.0%
!!! TATTGTTATACTTTTGTAGA+TGG + chr8.1:24663574-24663593 MS.gene44417:intron 20.0%
!!! TCTTTTTAGGAATTTTGTTT+AGG + chr8.1:24663483-24663502 MS.gene44417:intron 20.0%
!!! TTATTACATTTTTTGTCTAG+GGG + chr8.1:24662973-24662992 MS.gene44417:intron 20.0%
!!! TTTTCTATCTGTTTCTTTTT+AGG + chr8.1:24663470-24663489 MS.gene44417:intron 20.0%
! AATACAATTAAACAACTCGT+GGG - chr8.1:24663547-24663566 None:intergenic 25.0%
! AGAACAAAACAAGAAAACAA+AGG + chr8.1:24662340-24662359 MS.gene44417:CDS 25.0%
! AGTAGTGAAAAAATGTTTAG+TGG - chr8.1:24662714-24662733 None:intergenic 25.0%
! CTGTTATAAAATTTGGTAGA+TGG + chr8.1:24662247-24662266 MS.gene44417:intron 25.0%
! TAATACAATTAAACAACTCG+TGG - chr8.1:24663548-24663567 None:intergenic 25.0%
! TAATTAATGAAATGCTAACC+GGG - chr8.1:24662944-24662963 None:intergenic 25.0%
! TATTACACGTATTCATGAAA+GGG + chr8.1:24663424-24663443 MS.gene44417:intron 25.0%
! TTATTACACGTATTCATGAA+AGG + chr8.1:24663423-24663442 MS.gene44417:intron 25.0%
!! TAAGGAATACTTCTTCTTTT+GGG + chr8.1:24663263-24663282 MS.gene44417:intron 25.0%
!! TGTTGGCTGTTATAATTAAT+TGG - chr8.1:24663379-24663398 None:intergenic 25.0%
!! TTAAGGAATACTTCTTCTTT+TGG + chr8.1:24663262-24663281 MS.gene44417:intron 25.0%
!!! AAAGTATCGTCAATAATTGT+TGG - chr8.1:24663396-24663415 None:intergenic 25.0%
!!! AATAATTAACTTGTGCCTTA+AGG - chr8.1:24663164-24663183 None:intergenic 25.0%
!!! ATAATTAACTTGTGCCTTAA+GGG - chr8.1:24663163-24663182 None:intergenic 25.0%
AATATCATTAATCAATGCCC+CGG + chr8.1:24662923-24662942 MS.gene44417:intron 30.0%
AATTAATGAAATGCTAACCG+GGG - chr8.1:24662943-24662962 None:intergenic 30.0%
AGCAATGATAGTAATGTCAA+TGG - chr8.1:24662624-24662643 None:intergenic 30.0%
ATTATTAGGGTTATGCTAAC+CGG + chr8.1:24662776-24662795 MS.gene44417:intron 30.0%
CATCATCATCAATGATACTA+TGG - chr8.1:24662397-24662416 None:intergenic 30.0%
TAAAATTTGGTAGATGGACA+AGG + chr8.1:24662253-24662272 MS.gene44417:intron 30.0%
TTAGTGGCAATTATTAAGGT+AGG - chr8.1:24662667-24662686 None:intergenic 30.0%
! AAGGAATACTTCTTCTTTTG+GGG + chr8.1:24663264-24663283 MS.gene44417:intron 30.0%
! GTTAACGAAGTTTCCTTTTA+TGG - chr8.1:24662844-24662863 None:intergenic 30.0%
!! TCATATGATGAGAGTATTGA+AGG + chr8.1:24662434-24662453 MS.gene44417:intron 30.0%
!!! AACATTGATTTTGAAAGCGA+GGG - chr8.1:24663020-24663039 None:intergenic 30.0%
!!! TAAAAAGCGTTTGGAAGTTT+TGG + chr8.1:24662316-24662335 MS.gene44417:CDS 30.0%
!!! TTTTTTAACATGTGCCCTAA+GGG + chr8.1:24663287-24663306 MS.gene44417:intron 30.0%
AATGTGTATTAGTGTCGTGT+TGG - chr8.1:24662045-24662064 None:intergenic 35.0%
CACTTCACACTTATGTTTGA+AGG + chr8.1:24661990-24662009 MS.gene44417:intron 35.0%
TAACAAGTTTCTCAGAGTAC+CGG - chr8.1:24662798-24662817 None:intergenic 35.0%
TACTATCATTGCTCAGGTAA+AGG + chr8.1:24662631-24662650 MS.gene44417:intron 35.0%
TCATCAATGATACTATGGTC+TGG - chr8.1:24662392-24662411 None:intergenic 35.0%
TCTTGTTCCTAACCTGAAAA+AGG + chr8.1:24661964-24661983 MS.gene44417:CDS 35.0%
TGACATTACTATCATTGCTC+AGG + chr8.1:24662625-24662644 MS.gene44417:CDS 35.0%
! ATACTTTTGTAGATGGGTGA+AGG + chr8.1:24663581-24663600 MS.gene44417:intron 35.0%
! TACTTTTGTAGATGGGTGAA+GGG + chr8.1:24663582-24663601 MS.gene44417:intron 35.0%
!! AATGTTAACTTGTGCCCTTA+AGG + chr8.1:24663146-24663165 MS.gene44417:intron 35.0%
!! GAAAGAGCTTAAAAAGCGTT+TGG + chr8.1:24662307-24662326 MS.gene44417:CDS 35.0%
!! TGTGAAGTGTTACCTTTTTC+AGG - chr8.1:24661979-24661998 None:intergenic 35.0%
!! TTGAGTGCTATTTAGCTAGT+GGG - chr8.1:24662175-24662194 None:intergenic 35.0%
!! TTTGAGTGCTATTTAGCTAG+TGG - chr8.1:24662176-24662195 None:intergenic 35.0%
!!! AGTGTTACCTTTTTCAGGTT+AGG - chr8.1:24661974-24661993 None:intergenic 35.0%
!!! CAACATTGATTTTGAAAGCG+AGG - chr8.1:24663021-24663040 None:intergenic 35.0%
!!! GTTTTTTAACATGTGCCCTA+AGG + chr8.1:24663286-24663305 MS.gene44417:intron 35.0%
AATAGCAGTGTCTTACCCTT+TGG + chr8.1:24662593-24662612 MS.gene44417:CDS 40.0%
AATGTCAATGGAATCCCCAA+AGG - chr8.1:24662612-24662631 None:intergenic 40.0%
ACACGTATTCATGAAAGGGA+GGG + chr8.1:24663428-24663447 MS.gene44417:intron 40.0%
AGGGTACAACTTGAGCATAA+AGG + chr8.1:24663601-24663620 MS.gene44417:CDS 40.0%
ATAGCAGTGTCTTACCCTTT+GGG + chr8.1:24662594-24662613 MS.gene44417:CDS 40.0%
ATGTCAATGGAATCCCCAAA+GGG - chr8.1:24662611-24662630 None:intergenic 40.0%
TACACGTATTCATGAAAGGG+AGG + chr8.1:24663427-24663446 MS.gene44417:intron 40.0%
TGGTTTCTTCAGAACAACCA+CGG - chr8.1:24662372-24662391 None:intergenic 40.0%
TTACTGTCGATGTTGTGTCT+TGG + chr8.1:24662114-24662133 MS.gene44417:intron 40.0%
! CACTTTTGCTTGCACTTGAA+AGG - chr8.1:24662474-24662493 None:intergenic 40.0%
!! AAGTGCAAGCAAAAGTGTCA+GGG + chr8.1:24662477-24662496 MS.gene44417:intron 40.0%
!! AGTGTTAACTTGTGCCCTTA+GGG - chr8.1:24663304-24663323 None:intergenic 40.0%
!! TAGTGTTAACTTGTGCCCTT+AGG - chr8.1:24663305-24663324 None:intergenic 40.0%
!! TGAGTGCTATTTAGCTAGTG+GGG - chr8.1:24662174-24662193 None:intergenic 40.0%
ACTTGTCAAGAACCTACGCA+TGG + chr8.1:24663625-24663644 MS.gene44417:CDS 45.0%
CTGCAAGAGCAATGAAGCTT+TGG - chr8.1:24661943-24661962 None:intergenic 45.0%
GAAAACAAAGGTAGAGTCCG+TGG + chr8.1:24662352-24662371 MS.gene44417:CDS 45.0%
TAGCAGTGTCTTACCCTTTG+GGG + chr8.1:24662595-24662614 MS.gene44417:CDS 45.0%
! ATTCACTGCCAGAAGCACAA+GGG + chr8.1:24662518-24662537 MS.gene44417:CDS 45.0%
! CAGGGAAAGAGATGCTGATT+CGG + chr8.1:24662495-24662514 MS.gene44417:CDS 45.0%
!! CAAGTGCAAGCAAAAGTGTC+AGG + chr8.1:24662476-24662495 MS.gene44417:intron 45.0%
!! GGGAGGGCGTATTTTATTCT+AGG + chr8.1:24663444-24663463 MS.gene44417:intron 45.0%
!! ACTAATTATTATTAATTATT+AGG + chr8.1:24662762-24662781 MS.gene44417:intron 5.0%
!! CTAATTATTATTAATTATTA+GGG + chr8.1:24662763-24662782 MS.gene44417:intron 5.0%
ACTTCAATGCTGCCATGCGT+AGG - chr8.1:24663640-24663659 None:intergenic 50.0%
GGGGATTCTGGTGAAAGTCA+TGG + chr8.1:24662538-24662557 MS.gene44417:CDS 50.0%
GGTCATCTGAGTGACACGTT+TGG - chr8.1:24662999-24663018 None:intergenic 50.0%
! GATTCACTGCCAGAAGCACA+AGG + chr8.1:24662517-24662536 MS.gene44417:CDS 50.0%
! TTCACTGCCAGAAGCACAAG+GGG + chr8.1:24662519-24662538 MS.gene44417:CDS 50.0%
CCAGAATCCCCTTGTGCTTC+TGG - chr8.1:24662529-24662548 None:intergenic 55.0%
! CCAGAAGCACAAGGGGATTC+TGG + chr8.1:24662526-24662545 MS.gene44417:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 24661908 24663682 24661908 ID=MS.gene44417
chr8.1 mRNA 24661908 24663682 24661908 ID=MS.gene44417.t1;Parent=MS.gene44417
chr8.1 exon 24661908 24661985 24661908 ID=MS.gene44417.t1.exon1;Parent=MS.gene44417.t1
chr8.1 CDS 24661908 24661985 24661908 ID=cds.MS.gene44417.t1;Parent=MS.gene44417.t1
chr8.1 exon 24662266 24662398 24662266 ID=MS.gene44417.t1.exon2;Parent=MS.gene44417.t1
chr8.1 CDS 24662266 24662398 24662266 ID=cds.MS.gene44417.t1;Parent=MS.gene44417.t1
chr8.1 exon 24662480 24662646 24662480 ID=MS.gene44417.t1.exon3;Parent=MS.gene44417.t1
chr8.1 CDS 24662480 24662646 24662480 ID=cds.MS.gene44417.t1;Parent=MS.gene44417.t1
chr8.1 exon 24663593 24663682 24663593 ID=MS.gene44417.t1.exon4;Parent=MS.gene44417.t1
chr8.1 CDS 24663593 24663682 24663593 ID=cds.MS.gene44417.t1;Parent=MS.gene44417.t1
Gene Sequence

>MS.gene44417

ATGGCTGAAAGAAAGCGAAGAGAGAAACTTAGCCAAAGCTTCATTGCTCTTGCAGCTCTTGTTCCTAACCTGAAAAAGGTAACACTTCACACTTATGTTTGAAGGCGTGTCTCATGTTTGTCACGTATCAGTGTCCAACACGACACTAATACACATTATTACATACAATAATGTCAATTTTACGAATAATTAGTAATATTGACATGTTACTGTCGATGTTGTGTCTTGGTGTCTGTGTTAAGACAATAAATCAATTTTGATTACCCCACTAGCTAAATAGCACTCAAATCATTGTATTTTTATTTTCTTCATGAATTGTTAACATCTTCTGATCAAATACTGTTATAAAATTTGGTAGATGGACAAGGCTTCTGTATTAGCTGAGTCTATCACATACGTGAAAGAGCTTAAAAAGCGTTTGGAAGTTTTGGAAGAACAAAACAAGAAAACAAAGGTAGAGTCCGTGGTTGTTCTGAAGAAACCAGACCATAGTATCATTGATGATGATGATGATGATGATAGCTCATCATATGATGAGAGTATTGAAGGTGCTACTGATTCATCCTTTCAAGTGCAAGCAAAAGTGTCAGGGAAAGAGATGCTGATTCGGATTCACTGCCAGAAGCACAAGGGGATTCTGGTGAAAGTCATGGCTGAGATTCAAAGCATACAATTGTTTGCTGTGAATAGCAGTGTCTTACCCTTTGGGGATTCCATTGACATTACTATCATTGCTCAGGTAAAGGACAATCTCTACCTACCTTAATAATTGCCACTAAATATTCATTGTTTAAAAGAGAATGCCACTAAACATTTTTTCACTACTTTTTAAGTATTATTATTTTGTTTGAGGCACTAATTATTATTAATTATTAGGGTTATGCTAACCGGTACTCTGAGAAACTTGTTAAGAATAAAAAAAGGAATTTATTACCATAAAAGGAAACTTCGTTAACTTATTTATGAATTAATTACACAGTTTTCAATGCAATAATTACTATATAATTTTCTTTTTAATATCATTAATCAATGCCCCGGTTAGCATTTCATTAATTATTATTATCATTATTACATTTTTTGTCTAGGGGCCAAACGTGTCACTCAGATGACCCTCGCTTTCAAAATCAATGTTGTTTTAGTCTAAAAAATTAGAATAAGTGTTGTTTTATTTTTCTATTGTAGTGTTAGTCAATTTATTTTAATTTTACTATTAAACTTGTGTTGTTTTTTTTTTGGAAAATGTTAACTTGTGCCCTTAAGGCACAAGTTAATTATTGTAGTATAGAAATAATTTATTGGAGTGTGTGCAATGTATTTAATTTTTAACTTTTTAGTCAATTAAATGCACAAAATTTTAAGGAATACTTCTTCTTTTGGGGTTTTTTAACATGTGCCCTAAGGGCACAAGTTAACACTACTTTTTTTTTATATCAGGATGTTAAATTTATGTTGCAATACATCATCACTTCCAATTAATTATAACAGCCAACAATTATTGACGATACTTTTAAAAAATTATTACACGTATTCATGAAAGGGAGGGCGTATTTTATTCTAGGCTGTTTTCTATCTGTTTCTTTTTAGGAATTTTGTTTAGGAGTATCTTTTTTTTTTATTATTATTTTTGTCTTATTTGCCCACGAGTTGTTTAATTGTATTAAAATACTATTGTTATACTTTTGTAGATGGGTGAAGGGTACAACTTGAGCATAAAGGAACTTGTCAAGAACCTACGCATGGCAGCATTGAAGTTTATGTCATCAAAGCATGAATGA
Protein sequence

>MS.gene44417.t1

MAERKRREKLSQSFIALAALVPNLKKMDKASVLAESITYVKELKKRLEVLEEQNKKTKVESVVVLKKPDHMQAKVSGKEMLIRIHCQKHKGILVKVMAEIQSIQLFAVNSSVLPFGDSIDITIIAQMGEGYNLSIKELVKNLRMAALKFMSSKHE