AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44527

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44527.t1 MTR_4g094982 94.982 279 5 3 1 278 1 271 0.0 525
MS.gene44527.t1 MTR_5g016510 53.191 329 88 9 1 277 1 315 7.58e-105 308
MS.gene44527.t1 MTR_6g015455 79.091 110 23 0 1 110 1 110 4.22e-57 197
MS.gene44527.t1 MTR_3g101290 78.095 105 23 0 1 105 33 137 1.59e-56 181
MS.gene44527.t1 MTR_5g082910 74.257 101 26 0 2 102 16 116 1.32e-49 166
MS.gene44527.t1 MTR_4g019370 70.874 103 30 0 3 105 36 138 2.65e-49 166
MS.gene44527.t1 MTR_3g110028 53.211 109 51 0 4 112 84 192 4.00e-38 142
MS.gene44527.t1 MTR_1g026870 53.211 109 51 0 4 112 84 192 7.48e-38 142
MS.gene44527.t1 MTR_4g082040 58.416 101 42 0 5 105 105 205 1.19e-37 137
MS.gene44527.t1 MTR_5g041570 57.426 101 43 0 5 105 134 234 1.95e-37 137
MS.gene44527.t1 MTR_6g027370 51.786 112 54 0 4 115 98 209 1.20e-36 133
MS.gene44527.t1 MTR_7g061330 52.294 109 52 0 4 112 112 220 1.24e-36 137
MS.gene44527.t1 MTR_7g461410 52.294 109 52 0 4 112 112 220 1.24e-36 137
MS.gene44527.t1 MTR_7g061330 52.294 109 52 0 4 112 76 184 1.32e-36 136
MS.gene44527.t1 MTR_7g086960 55.446 101 45 0 5 105 89 189 5.72e-35 129
MS.gene44527.t1 MTR_4g105660 52.885 104 49 0 4 107 179 282 3.46e-34 128
MS.gene44527.t1 MTR_3g077650 53.271 107 50 0 1 107 177 283 3.49e-34 129
MS.gene44527.t1 MTR_6g074860 53.000 100 47 0 5 104 4 103 1.12e-33 123
MS.gene44527.t1 MTR_3g089045 55.446 101 45 0 5 105 16 116 1.51e-33 124
MS.gene44527.t1 MTR_5g042030 56.863 102 43 1 5 105 9 110 1.82e-33 124
MS.gene44527.t1 MTR_5g049190 41.958 143 70 2 4 133 18 160 2.76e-33 122
MS.gene44527.t1 MTR_7g037260 51.429 105 51 0 1 105 141 245 3.16e-33 124
MS.gene44527.t1 MTR_5g070020 50.962 104 51 0 4 107 121 224 7.40e-33 123
MS.gene44527.t1 MTR_7g037130 50.943 106 50 1 1 106 141 244 8.57e-33 123
MS.gene44527.t1 MTR_7g451170 50.962 104 51 0 2 105 188 291 3.49e-32 122
MS.gene44527.t1 MTR_4g029540 56.863 102 42 2 5 104 12 113 4.98e-32 120
MS.gene44527.t1 MTR_3g463400 50.962 104 51 0 4 107 132 235 1.06e-31 122
MS.gene44527.t1 MTR_3g461490 50.962 104 50 1 5 107 14 117 8.22e-31 117
MS.gene44527.t1 MTR_4g088015 50.495 101 50 0 4 104 220 320 9.24e-31 119
MS.gene44527.t1 MTR_3g052450 53.922 102 46 1 5 105 42 143 9.75e-31 120
MS.gene44527.t1 MTR_8g006470 54.902 102 44 2 5 104 12 113 1.66e-30 115
MS.gene44527.t1 MTR_0008s0390 42.143 140 78 2 5 143 15 152 1.10e-29 113
MS.gene44527.t1 MTR_5g010650 50.000 98 49 0 2 99 107 204 1.24e-29 117
MS.gene44527.t1 MTR_3g052430 51.961 102 48 1 5 105 43 144 1.30e-29 117
MS.gene44527.t1 MTR_5g029840 50.000 102 50 1 5 105 14 115 1.30e-29 114
MS.gene44527.t1 MTR_5g007370 52.830 106 41 2 5 105 14 115 1.47e-29 113
MS.gene44527.t1 MTR_0008s0470 49.515 103 51 1 5 106 15 117 7.01e-29 111
MS.gene44527.t1 MTR_7g110830 53.922 102 46 1 5 105 14 115 1.14e-28 112
MS.gene44527.t1 MTR_2g099740 45.312 128 63 2 5 131 14 135 1.17e-28 113
MS.gene44527.t1 MTR_6g012690 41.844 141 72 3 5 140 14 149 1.30e-28 112
MS.gene44527.t1 MTR_1g062940 50.962 104 50 1 5 107 8 111 1.51e-28 108
MS.gene44527.t1 MTR_3g028740 54.902 102 45 1 5 105 24 125 1.54e-28 112
MS.gene44527.t1 MTR_1g085640 52.941 102 47 1 5 105 14 115 2.01e-28 112
MS.gene44527.t1 MTR_1g085040 52.941 102 47 1 5 105 14 115 2.85e-28 111
MS.gene44527.t1 MTR_7g117730 50.980 102 49 1 5 105 14 115 3.17e-28 108
MS.gene44527.t1 MTR_0251s0050 49.020 102 51 1 5 105 15 116 3.35e-28 109
MS.gene44527.t1 MTR_3g074520 49.057 106 45 2 5 105 14 115 3.76e-28 110
MS.gene44527.t1 MTR_1g100653 47.222 108 56 1 5 111 14 121 3.99e-28 109
MS.gene44527.t1 MTR_8g017500 44.776 134 66 3 5 137 14 140 4.00e-28 110
MS.gene44527.t1 MTR_1g017140 46.721 122 60 3 5 124 14 132 4.09e-28 110
MS.gene44527.t1 MTR_7g087130 46.957 115 52 2 5 114 14 124 4.10e-28 110
MS.gene44527.t1 MTR_2g097910 45.736 129 57 2 5 120 22 150 4.45e-28 110
MS.gene44527.t1 MTR_8g095390 49.593 123 52 3 5 123 14 130 5.59e-28 109
MS.gene44527.t1 MTR_7g035350 48.515 101 52 0 1 101 221 321 6.22e-28 112
MS.gene44527.t1 MTR_3g103570 50.485 103 49 2 5 105 14 116 6.31e-28 110
MS.gene44527.t1 MTR_4g121460 44.853 136 65 2 5 130 14 149 6.76e-28 110
MS.gene44527.t1 MTR_4g057635 51.456 103 48 2 5 105 14 116 6.88e-28 109
MS.gene44527.t1 MTR_2g089450 49.505 101 50 1 5 104 14 114 6.98e-28 108
MS.gene44527.t1 MTR_7g102110 47.664 107 54 2 5 109 14 120 7.02e-28 108
MS.gene44527.t1 MTR_4g105130 52.941 102 47 1 5 105 14 115 1.01e-27 110
MS.gene44527.t1 MTR_7g115650 48.182 110 48 2 1 105 10 115 1.06e-27 106
MS.gene44527.t1 MTR_2g034790 35.233 193 115 5 5 189 14 204 1.12e-27 109
MS.gene44527.t1 MTR_1g112760 50.980 102 49 1 5 105 15 116 1.18e-27 107
MS.gene44527.t1 MTR_8g017440 50.476 105 51 1 5 108 14 118 1.24e-27 109
MS.gene44527.t1 MTR_1g043080 48.113 106 46 2 5 105 14 115 1.35e-27 107
MS.gene44527.t1 MTR_4g063100 44.660 103 54 2 5 105 9 110 1.41e-27 107
MS.gene44527.t1 MTR_1g045610 46.667 105 55 1 5 108 23 127 1.52e-27 107
MS.gene44527.t1 MTR_3g077110 51.961 102 48 1 5 105 14 115 1.65e-27 109
MS.gene44527.t1 MTR_4g065017 52.941 102 47 1 5 105 19 120 1.67e-27 108
MS.gene44527.t1 MTR_4g478180 50.000 106 44 2 5 105 15 116 1.72e-27 109
MS.gene44527.t1 MTR_7g450950 46.667 105 53 1 4 105 156 260 1.86e-27 108
MS.gene44527.t1 MTR_1g043050 49.057 106 45 2 5 105 14 115 2.19e-27 107
MS.gene44527.t1 MTR_1g017000 48.544 103 51 2 5 105 14 116 2.50e-27 106
MS.gene44527.t1 MTR_0063s0090 48.077 104 45 2 5 103 14 113 2.59e-27 105
MS.gene44527.t1 MTR_5g014990 50.485 103 49 2 5 105 14 116 2.65e-27 107
MS.gene44527.t1 MTR_1g073170 49.020 102 51 1 5 105 22 123 2.67e-27 106
MS.gene44527.t1 MTR_8g017540 49.550 111 53 2 5 112 60 170 3.20e-27 109
MS.gene44527.t1 MTR_2g089420 48.624 109 55 1 5 112 13 121 3.67e-27 109
MS.gene44527.t1 MTR_2g064160 49.020 102 51 1 5 105 13 114 4.16e-27 107
MS.gene44527.t1 MTR_1g076150 38.728 173 95 4 5 170 14 182 4.22e-27 106
MS.gene44527.t1 MTR_1g057980 51.042 96 47 0 5 100 80 175 5.41e-27 106
MS.gene44527.t1 MTR_4g091490 47.059 102 53 1 5 105 15 116 5.75e-27 107
MS.gene44527.t1 MTR_8g027345 50.980 102 49 1 5 105 14 115 6.14e-27 106
MS.gene44527.t1 MTR_4g485530 44.340 106 58 1 1 105 10 115 6.45e-27 103
MS.gene44527.t1 MTR_2g095520 53.061 98 44 2 5 100 14 111 8.88e-27 106
MS.gene44527.t1 MTR_6g027340 32.571 175 107 3 5 179 16 179 1.19e-26 103
MS.gene44527.t1 MTR_7g010210 43.609 133 65 3 5 131 14 142 1.29e-26 105
MS.gene44527.t1 MTR_6g009430 45.098 102 55 1 5 105 14 115 1.44e-26 106
MS.gene44527.t1 MTR_7g010210 43.609 133 65 3 5 131 14 142 1.48e-26 106
MS.gene44527.t1 MTR_2g089620 49.020 102 51 1 5 105 14 115 1.80e-26 105
MS.gene44527.t1 MTR_7g096930 48.113 106 46 2 5 105 14 115 1.92e-26 105
MS.gene44527.t1 MTR_8g098860 50.000 102 50 1 5 105 14 115 2.08e-26 105
MS.gene44527.t1 MTR_7g076740 45.455 121 55 4 5 119 14 129 2.14e-26 105
MS.gene44527.t1 MTR_2g011660 48.039 102 52 1 5 105 15 116 2.20e-26 106
MS.gene44527.t1 MTR_7g011170 47.115 104 54 1 5 107 14 117 2.43e-26 105
MS.gene44527.t1 MTR_4g082230 40.714 140 75 3 5 143 14 146 3.20e-26 106
MS.gene44527.t1 MTR_5g079670 47.059 102 53 1 5 105 13 114 3.26e-26 102
MS.gene44527.t1 MTR_0140s0030 45.217 115 54 2 5 114 15 125 3.30e-26 105
MS.gene44527.t1 MTR_0489s0020 45.217 115 54 2 5 114 15 125 3.30e-26 105
MS.gene44527.t1 MTR_4g097570 51.020 98 45 2 5 99 14 111 3.46e-26 104
MS.gene44527.t1 MTR_8g017340 52.427 103 47 2 5 105 14 116 3.93e-26 107
MS.gene44527.t1 MTR_8g031360 50.485 103 49 2 5 105 15 117 4.68e-26 104
MS.gene44527.t1 MTR_1g100667 47.115 104 54 1 5 107 15 118 6.31e-26 103
MS.gene44527.t1 MTR_3g097450 49.524 105 52 1 5 108 14 118 6.92e-26 103
MS.gene44527.t1 MTR_2g096380 42.308 104 57 2 5 106 8 110 7.82e-26 102
MS.gene44527.t1 MTR_6g055910 48.039 102 52 1 5 105 16 117 9.87e-26 103
MS.gene44527.t1 MTR_6g027360 39.815 108 65 0 5 112 78 185 9.97e-26 103
MS.gene44527.t1 MTR_8g042410 47.059 102 53 1 5 105 39 140 1.04e-25 106
MS.gene44527.t1 MTR_5g078140 33.182 220 124 6 5 207 14 227 1.14e-25 103
MS.gene44527.t1 MTR_1g021230 49.020 102 51 1 5 105 59 160 1.15e-25 105
MS.gene44527.t1 MTR_4g100720 45.192 104 56 1 5 107 15 118 1.16e-25 100
MS.gene44527.t1 MTR_4g082290 40.000 140 76 3 5 143 14 146 1.24e-25 105
MS.gene44527.t1 MTR_5g010020 51.546 97 46 1 5 100 14 110 1.42e-25 103
MS.gene44527.t1 MTR_3g039990 42.735 117 58 2 5 116 15 127 1.98e-25 102
MS.gene44527.t1 MTR_4g073420 49.020 102 51 1 5 105 14 115 2.67e-25 102
MS.gene44527.t1 MTR_4g097570 50.515 97 46 2 5 99 14 110 2.73e-25 102
MS.gene44527.t1 MTR_5g078930 34.463 177 109 3 5 177 11 184 2.94e-25 100
MS.gene44527.t1 MTR_3g083540 47.059 102 53 1 5 105 43 144 3.14e-25 102
MS.gene44527.t1 MTR_6g090405 49.515 103 50 2 5 105 14 116 3.16e-25 101
MS.gene44527.t1 MTR_8g017390 48.598 107 53 2 5 109 14 120 3.28e-25 104
MS.gene44527.t1 MTR_3g065440 47.170 106 47 2 5 105 14 115 3.55e-25 102
MS.gene44527.t1 MTR_2g088170 51.961 102 48 1 5 105 31 132 3.99e-25 103
MS.gene44527.t1 MTR_0008s0280 46.226 106 54 2 5 107 14 119 4.00e-25 100
MS.gene44527.t1 MTR_8g017350 51.456 103 48 2 5 105 14 116 4.47e-25 104
MS.gene44527.t1 MTR_0001s0360 44.762 105 57 1 5 108 9 113 4.75e-25 100
MS.gene44527.t1 MTR_7g111290 53.125 96 44 1 5 99 14 109 7.07e-25 102
MS.gene44527.t1 MTR_2g067420 49.485 97 48 1 5 100 16 112 9.62e-25 101
MS.gene44527.t1 MTR_7g017260 45.794 107 55 2 5 108 27 133 9.62e-25 100
MS.gene44527.t1 MTR_4g128670 50.000 98 47 2 5 100 14 111 1.33e-24 101
MS.gene44527.t1 MTR_7g035075 47.525 101 52 1 5 104 16 116 1.56e-24 98.2
MS.gene44527.t1 MTR_3g011610 44.118 102 56 1 5 105 39 140 1.58e-24 102
MS.gene44527.t1 MTR_1g110460 40.777 103 60 1 5 106 28 130 1.60e-24 100
MS.gene44527.t1 MTR_8g020490 47.059 102 53 1 5 105 10 111 1.68e-24 99.4
MS.gene44527.t1 MTR_6g012180 46.535 101 45 2 5 100 14 110 2.94e-24 99.8
MS.gene44527.t1 MTR_5g088610 46.364 110 55 3 1 106 7 116 3.57e-24 100
MS.gene44527.t1 MTR_5g078910 43.810 105 58 1 5 108 9 113 4.16e-24 99.0
MS.gene44527.t1 MTR_5g079220 43.810 105 58 1 5 108 23 127 4.64e-24 98.6
MS.gene44527.t1 MTR_5g078800 44.118 102 56 1 5 105 9 110 5.78e-24 98.2
MS.gene44527.t1 MTR_4g102380 45.283 106 49 2 5 105 14 115 6.51e-24 98.2
MS.gene44527.t1 MTR_5g079290 41.905 105 60 1 5 108 19 123 6.76e-24 97.8
MS.gene44527.t1 MTR_5g088080 48.113 106 52 3 2 105 11 115 2.25e-23 96.3
MS.gene44527.t1 MTR_5g088150 48.113 106 52 3 2 105 11 115 2.25e-23 96.3
MS.gene44527.t1 MTR_5g488210 48.113 106 52 3 2 105 11 115 2.25e-23 96.3
MS.gene44527.t1 MTR_6g006030 39.167 120 72 1 5 123 16 135 2.38e-23 95.1
MS.gene44527.t1 MTR_4g125520 38.281 128 78 1 5 131 14 141 2.58e-23 97.1
MS.gene44527.t1 MTR_5g088640 48.113 106 52 3 2 105 11 115 3.34e-23 96.3
MS.gene44527.t1 MTR_5g488170 48.113 106 52 3 2 105 11 115 3.40e-23 95.5
MS.gene44527.t1 MTR_7g109320 51.304 115 55 1 5 118 14 128 5.18e-23 97.1
MS.gene44527.t1 MTR_5g078860 43.137 102 57 1 5 105 9 110 5.46e-23 96.3
MS.gene44527.t1 MTR_5g079120 42.857 105 59 1 5 108 63 167 8.03e-23 95.9
MS.gene44527.t1 MTR_5g062790 47.222 108 54 3 1 106 7 113 8.89e-23 95.5
MS.gene44527.t1 MTR_0247s0040 44.000 100 55 1 5 103 9 108 1.08e-22 92.4
MS.gene44527.t1 MTR_8g060940 44.444 99 54 1 5 102 9 107 1.25e-22 94.0
MS.gene44527.t1 MTR_0193s0090 42.574 101 57 1 5 104 9 109 1.40e-22 92.8
MS.gene44527.t1 MTR_5g078950 41.000 100 58 1 5 103 9 108 4.28e-22 92.8
MS.gene44527.t1 MTR_0197s0010 40.367 109 64 1 8 115 6 114 7.58e-22 91.7
MS.gene44527.t1 MTR_1g086530 42.157 102 58 1 5 105 35 136 1.84e-21 91.7
MS.gene44527.t1 MTR_1g086510 41.509 106 61 1 5 109 23 128 3.85e-21 90.5
MS.gene44527.t1 MTR_1g083630 44.792 96 52 1 5 99 14 109 7.06e-20 89.7
MS.gene44527.t1 MTR_3g045430 40.594 101 59 1 8 107 18 118 8.18e-20 87.4
MS.gene44527.t1 MTR_4g063100 48.529 68 35 0 38 105 14 81 2.27e-19 84.7
MS.gene44527.t1 MTR_2g033170 40.566 106 62 1 1 105 22 127 3.15e-19 86.3
MS.gene44527.t1 MTR_5g038910 36.735 98 62 0 8 105 29 126 4.04e-19 87.0
MS.gene44527.t1 MTR_5g038910 36.735 98 62 0 8 105 29 126 4.42e-19 86.3
MS.gene44527.t1 MTR_8g468380 33.333 108 72 0 8 115 25 132 1.17e-18 85.5
MS.gene44527.t1 MTR_6g055910 52.941 68 32 0 38 105 21 88 2.12e-18 82.8
MS.gene44527.t1 MTR_2g096380 44.928 69 38 0 38 106 23 91 7.21e-18 80.5
MS.gene44527.t1 MTR_5g007300 50.667 75 36 1 5 78 66 140 7.42e-18 78.6
MS.gene44527.t1 MTR_4g128190 44.954 109 44 4 5 109 13 109 1.31e-17 80.1
MS.gene44527.t1 MTR_4g123040 40.952 105 61 1 1 104 22 126 2.03e-17 80.9
MS.gene44527.t1 MTR_7g111290 59.677 62 25 0 38 99 6 67 2.99e-17 80.9
MS.gene44527.t1 MTR_7g061550 34.783 115 72 1 8 119 10 124 1.30e-15 76.3
MS.gene44527.t1 MTR_1g008970 29.932 147 75 3 2 143 107 230 2.54e-15 74.3
MS.gene44527.t1 MTR_1g085880 43.000 100 54 3 8 105 17 115 7.54e-13 66.2
MS.gene44527.t1 MTR_1g085770 43.000 100 54 3 8 105 17 115 1.27e-12 67.0
MS.gene44527.t1 MTR_0023s0210 40.000 75 44 1 5 78 9 83 1.82e-12 62.4
MS.gene44527.t1 MTR_6g080360 35.106 94 60 1 5 98 530 622 5.52e-11 63.2
MS.gene44527.t1 MTR_6g080360 35.106 94 60 1 5 98 310 402 9.48e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44527.t1 AT4G37260 54.448 281 80 10 1 249 9 273 4.50e-84 255
MS.gene44527.t1 AT5G67300 54.286 280 91 7 2 251 3 275 9.01e-84 253
MS.gene44527.t1 AT2G23290 50.182 275 101 6 1 251 9 271 1.19e-76 236
MS.gene44527.t1 AT3G50060 48.561 278 103 7 2 251 3 268 1.36e-73 228
MS.gene44527.t1 AT3G55730 73.786 103 27 0 3 105 54 156 4.22e-50 170
MS.gene44527.t1 AT3G09230 48.634 183 82 3 2 179 52 227 4.60e-48 164
MS.gene44527.t1 AT2G39880 67.961 103 33 0 3 105 48 150 8.62e-47 160
MS.gene44527.t1 AT3G09370 54.128 109 50 0 2 110 127 235 2.32e-38 141
MS.gene44527.t1 AT3G09370 54.128 109 50 0 2 110 132 240 2.34e-38 141
MS.gene44527.t1 AT3G09370 54.128 109 50 0 2 110 140 248 3.61e-38 140
MS.gene44527.t1 AT1G69560 56.436 101 44 0 5 105 107 207 1.51e-37 135
MS.gene44527.t1 AT1G69560 56.436 101 44 0 5 105 123 223 2.23e-37 135
MS.gene44527.t1 AT1G26780 56.436 101 44 0 5 105 98 198 2.49e-37 133
MS.gene44527.t1 AT5G02320 50.459 109 54 0 4 112 66 174 3.34e-37 137
MS.gene44527.t1 AT3G29020 55.446 101 45 0 5 105 65 165 4.79e-37 131
MS.gene44527.t1 AT5G02320 50.459 109 54 0 4 112 126 234 5.28e-37 138
MS.gene44527.t1 AT5G02320 50.459 109 54 0 4 112 126 234 5.28e-37 138
MS.gene44527.t1 AT5G11510 49.541 109 55 0 4 112 80 188 5.60e-37 139
MS.gene44527.t1 AT5G11510 49.541 109 55 0 4 112 80 188 5.60e-37 139
MS.gene44527.t1 AT5G11510 49.541 109 55 0 4 112 80 188 5.60e-37 139
MS.gene44527.t1 AT5G11510 49.541 109 55 0 4 112 80 188 8.16e-37 139
MS.gene44527.t1 AT5G11510 49.541 109 55 0 4 112 80 188 8.21e-37 139
MS.gene44527.t1 AT1G26780 56.436 101 44 0 5 105 98 198 8.57e-37 134
MS.gene44527.t1 AT4G32730 52.294 109 52 0 4 112 86 194 1.04e-36 139
MS.gene44527.t1 AT4G32730 52.294 109 52 0 4 112 86 194 1.04e-36 139
MS.gene44527.t1 AT4G32730 52.294 109 52 0 4 112 86 194 1.04e-36 139
MS.gene44527.t1 AT4G32730 52.294 109 52 0 4 112 86 194 1.04e-36 139
MS.gene44527.t1 AT4G32730 52.294 109 52 0 4 112 86 194 1.10e-36 138
MS.gene44527.t1 AT3G29020 55.446 101 45 0 5 105 67 167 1.89e-36 132
MS.gene44527.t1 AT5G17800 55.446 101 45 0 5 105 93 193 2.10e-36 132
MS.gene44527.t1 AT1G17950 43.750 128 67 1 5 132 5 127 6.82e-35 126
MS.gene44527.t1 AT4G33450 48.696 115 58 1 5 118 19 133 7.37e-35 126
MS.gene44527.t1 AT3G27785 52.885 104 49 0 4 107 188 291 6.67e-34 128
MS.gene44527.t1 AT4G18770 51.818 110 48 1 4 108 216 325 7.65e-34 127
MS.gene44527.t1 AT1G73410 53.465 101 47 0 5 105 6 106 1.02e-33 122
MS.gene44527.t1 AT1G73410 53.465 101 47 0 5 105 6 106 1.23e-33 123
MS.gene44527.t1 AT5G11050 50.000 104 52 0 4 107 104 207 1.73e-33 126
MS.gene44527.t1 AT5G58850 45.528 123 60 1 4 119 104 226 2.59e-33 126
MS.gene44527.t1 AT5G60890 52.941 102 47 1 5 105 14 115 9.45e-31 116
MS.gene44527.t1 AT4G01680 54.902 102 45 1 5 105 14 115 1.74e-30 114
MS.gene44527.t1 AT5G10280 50.467 107 44 2 5 106 14 116 2.30e-30 116
MS.gene44527.t1 AT4G26930 52.475 101 47 1 5 104 21 121 2.33e-30 117
MS.gene44527.t1 AT5G39700 44.248 113 63 0 6 118 57 169 3.64e-30 112
MS.gene44527.t1 AT1G16490 40.217 184 91 4 5 175 16 193 4.09e-30 114
MS.gene44527.t1 AT5G56110 49.057 106 53 1 5 109 14 119 4.88e-30 115
MS.gene44527.t1 AT3G60460 53.922 102 45 2 5 104 13 114 9.84e-30 114
MS.gene44527.t1 AT4G01680 54.902 102 45 1 5 105 14 115 9.95e-30 115
MS.gene44527.t1 AT1G57560 34.188 234 125 6 5 220 14 236 5.49e-29 112
MS.gene44527.t1 AT5G57620 52.427 103 47 2 5 105 14 116 6.52e-29 112
MS.gene44527.t1 AT1G57560 33.784 222 103 5 5 220 14 197 9.04e-29 111
MS.gene44527.t1 AT1G09540 53.922 102 46 1 5 105 14 115 1.10e-28 112
MS.gene44527.t1 AT5G40360 48.000 100 52 0 5 104 158 257 1.22e-28 112
MS.gene44527.t1 AT5G65230 50.980 102 49 1 5 105 14 115 1.31e-28 111
MS.gene44527.t1 AT5G26660 39.286 168 91 2 5 161 14 181 2.05e-28 111
MS.gene44527.t1 AT2G31180 45.455 121 55 3 5 118 14 130 2.10e-28 109
MS.gene44527.t1 AT3G61250 44.118 136 65 4 5 135 14 143 2.18e-28 110
MS.gene44527.t1 AT3G13890 50.476 105 51 1 5 108 14 118 2.49e-28 111
MS.gene44527.t1 AT2G32460 50.000 102 50 1 5 105 20 121 2.85e-28 113
MS.gene44527.t1 AT1G18710 49.038 104 52 1 5 107 14 117 3.00e-28 109
MS.gene44527.t1 AT5G54230 50.980 102 49 1 5 105 14 115 3.02e-28 110
MS.gene44527.t1 AT2G32460 50.000 102 50 1 5 105 8 109 3.20e-28 113
MS.gene44527.t1 AT3G11440 49.020 102 51 1 5 105 43 144 3.22e-28 112
MS.gene44527.t1 AT4G28110 50.000 102 50 1 5 105 14 115 3.24e-28 109
MS.gene44527.t1 AT5G06100 49.020 102 51 1 5 105 34 135 3.61e-28 112
MS.gene44527.t1 AT1G74430 49.038 104 52 1 5 107 14 117 3.78e-28 109
MS.gene44527.t1 AT1G34670 49.057 106 45 2 5 105 14 115 4.07e-28 111
MS.gene44527.t1 AT3G48920 50.495 101 49 1 5 104 20 120 4.75e-28 108
MS.gene44527.t1 AT5G06100 49.020 102 51 1 5 105 34 135 5.28e-28 112
MS.gene44527.t1 AT5G06100 49.020 102 51 1 5 105 34 135 5.28e-28 112
MS.gene44527.t1 AT5G06100 49.020 102 51 1 5 105 34 135 5.28e-28 112
MS.gene44527.t1 AT5G06100 49.020 102 51 1 5 105 34 135 5.28e-28 112
MS.gene44527.t1 AT3G11440 49.020 102 51 1 5 105 43 144 5.31e-28 112
MS.gene44527.t1 AT3G11440 49.020 102 51 1 5 105 43 144 5.31e-28 112
MS.gene44527.t1 AT3G11440 49.020 102 51 1 5 105 43 144 5.31e-28 112
MS.gene44527.t1 AT5G12870 51.961 102 48 1 5 105 20 121 5.53e-28 108
MS.gene44527.t1 AT4G17785 51.961 102 48 1 5 105 15 116 7.33e-28 110
MS.gene44527.t1 AT1G79180 46.847 111 58 1 5 114 16 126 7.89e-28 108
MS.gene44527.t1 AT1G22640 34.951 206 113 6 5 200 14 208 8.69e-28 108
MS.gene44527.t1 AT3G24310 46.087 115 61 1 5 118 20 134 9.16e-28 108
MS.gene44527.t1 AT1G56160 50.980 102 49 1 5 105 16 117 9.47e-28 108
MS.gene44527.t1 AT4G17785 51.961 102 48 1 5 105 15 116 9.58e-28 110
MS.gene44527.t1 AT3G30210 48.571 105 53 1 5 108 29 133 1.26e-27 108
MS.gene44527.t1 AT1G08810 47.414 116 51 3 5 115 14 124 1.53e-27 107
MS.gene44527.t1 AT4G01680 49.123 114 45 2 5 105 14 127 1.54e-27 109
MS.gene44527.t1 AT2G36890 51.456 103 48 2 5 105 14 116 1.62e-27 108
MS.gene44527.t1 AT3G12720 50.476 105 51 1 5 108 24 128 1.65e-27 108
MS.gene44527.t1 AT1G63910 51.961 102 48 1 5 105 14 115 2.42e-27 109
MS.gene44527.t1 AT2G36890 51.456 103 48 2 5 105 55 157 2.72e-27 108
MS.gene44527.t1 AT3G47600 44.094 127 53 4 5 117 14 136 2.85e-27 108
MS.gene44527.t1 AT1G18570 49.020 102 51 1 5 105 15 116 2.87e-27 108
MS.gene44527.t1 AT3G13890 47.368 114 50 2 5 108 14 127 3.06e-27 108
MS.gene44527.t1 AT4G13480 48.077 104 53 1 5 107 8 111 3.11e-27 106
MS.gene44527.t1 AT5G52600 48.571 105 53 1 5 108 14 118 3.13e-27 105
MS.gene44527.t1 AT3G02940 47.170 106 47 2 5 105 14 115 3.44e-27 107
MS.gene44527.t1 AT3G08500 51.961 102 48 1 5 105 32 133 3.81e-27 108
MS.gene44527.t1 AT5G65790 45.082 122 62 3 5 124 14 132 3.88e-27 108
MS.gene44527.t1 AT4G05100 49.020 102 51 1 5 105 15 116 4.37e-27 107
MS.gene44527.t1 AT4G25560 50.000 102 50 1 5 105 12 113 4.49e-27 106
MS.gene44527.t1 AT5G23000 51.456 103 48 2 5 105 14 116 5.59e-27 107
MS.gene44527.t1 AT3G02940 48.039 102 52 1 5 105 14 115 6.27e-27 107
MS.gene44527.t1 AT3G02940 48.039 102 52 1 5 105 14 115 6.27e-27 107
MS.gene44527.t1 AT5G15310 48.039 102 52 1 5 105 14 115 6.40e-27 107
MS.gene44527.t1 AT5G15310 48.039 102 52 1 5 105 14 115 6.82e-27 107
MS.gene44527.t1 AT5G59780 43.137 102 57 1 5 105 10 111 7.10e-27 105
MS.gene44527.t1 AT4G00540 48.148 108 53 1 5 109 103 210 8.04e-27 108
MS.gene44527.t1 AT5G55020 50.495 101 49 1 5 104 28 128 8.17e-27 109
MS.gene44527.t1 AT3G53200 50.980 102 49 1 5 105 11 112 9.66e-27 104
MS.gene44527.t1 AT5G15310 48.039 102 52 1 5 105 14 115 9.83e-27 105
MS.gene44527.t1 AT3G46130 44.118 102 56 1 5 105 11 112 1.17e-26 105
MS.gene44527.t1 AT4G21440 49.020 102 51 1 5 105 14 115 1.36e-26 106
MS.gene44527.t1 AT3G01140 48.039 102 52 1 5 105 14 115 1.41e-26 106
MS.gene44527.t1 AT5G14750 46.078 102 54 1 5 105 18 119 1.48e-26 103
MS.gene44527.t1 AT3G28470 50.515 97 47 1 5 100 14 110 1.49e-26 106
MS.gene44527.t1 AT4G00540 48.148 108 53 1 5 109 101 208 1.67e-26 107
MS.gene44527.t1 AT5G61420 32.661 248 149 5 5 244 14 251 1.70e-26 106
MS.gene44527.t1 AT5G07690 50.495 101 49 1 5 104 14 114 1.78e-26 106
MS.gene44527.t1 AT2G16720 49.020 102 51 1 5 105 14 115 1.81e-26 104
MS.gene44527.t1 AT5G16770 47.170 106 47 2 5 105 14 115 1.89e-26 105
MS.gene44527.t1 AT5G16770 47.170 106 47 2 5 105 14 115 1.89e-26 105
MS.gene44527.t1 AT3G23250 38.095 147 78 3 5 142 14 156 1.89e-26 105
MS.gene44527.t1 AT3G01140 48.039 102 52 1 5 105 57 158 1.92e-26 107
MS.gene44527.t1 AT4G37780 50.000 106 51 2 5 108 14 119 1.97e-26 105
MS.gene44527.t1 AT5G40330 46.078 102 54 1 5 105 14 115 2.25e-26 103
MS.gene44527.t1 AT3G49690 50.485 103 49 2 5 105 14 116 2.41e-26 105
MS.gene44527.t1 AT1G35515 37.107 159 88 5 5 162 14 161 2.51e-26 103
MS.gene44527.t1 AT5G16770 47.170 106 47 2 5 105 14 115 3.28e-26 105
MS.gene44527.t1 AT5G16770 47.170 106 47 2 5 105 14 115 3.28e-26 105
MS.gene44527.t1 AT4G09460 50.000 102 50 1 5 105 14 115 3.34e-26 103
MS.gene44527.t1 AT4G38620 50.000 102 50 1 5 105 14 115 3.50e-26 104
MS.gene44527.t1 AT1G74080 50.485 103 49 2 5 106 14 115 3.84e-26 105
MS.gene44527.t1 AT5G62470 43.750 112 63 0 5 116 14 125 5.18e-26 105
MS.gene44527.t1 AT4G34990 49.020 102 51 1 5 105 14 115 5.47e-26 103
MS.gene44527.t1 AT1G74650 47.170 106 47 2 5 105 14 115 5.81e-26 104
MS.gene44527.t1 AT5G07700 49.020 102 51 1 5 105 14 115 6.64e-26 104
MS.gene44527.t1 AT5G07700 49.020 102 51 1 5 105 14 115 6.64e-26 104
MS.gene44527.t1 AT5G62470 43.590 117 57 2 5 116 14 126 8.47e-26 104
MS.gene44527.t1 AT3G27920 47.059 102 53 1 5 105 16 117 9.01e-26 102
MS.gene44527.t1 AT3G28910 47.170 106 47 2 5 105 14 115 9.14e-26 103
MS.gene44527.t1 AT3G13540 46.226 106 56 1 1 105 21 126 1.01e-25 102
MS.gene44527.t1 AT2G26960 49.505 101 50 1 5 104 22 122 1.73e-25 104
MS.gene44527.t1 AT1G66230 34.031 191 99 6 5 181 14 191 1.93e-25 102
MS.gene44527.t1 AT3G27810 33.838 198 107 6 5 199 22 198 4.04e-25 100
MS.gene44527.t1 AT5G14340 45.098 102 55 1 5 105 26 127 4.94e-25 101
MS.gene44527.t1 AT1G06180 47.170 106 47 2 5 105 14 115 6.53e-25 100
MS.gene44527.t1 AT4G22680 47.170 106 47 2 5 105 14 115 8.86e-25 100
MS.gene44527.t1 AT5G49330 43.750 128 67 3 5 127 14 141 9.14e-25 101
MS.gene44527.t1 AT3G12820 49.020 102 51 1 5 105 16 117 1.04e-24 99.4
MS.gene44527.t1 AT2G25230 45.545 101 53 2 5 104 26 125 1.18e-24 99.4
MS.gene44527.t1 AT3G62610 44.860 107 58 1 5 110 14 120 1.22e-24 101
MS.gene44527.t1 AT1G25340 41.176 102 59 1 5 105 20 121 2.14e-24 99.8
MS.gene44527.t1 AT1G25340 41.584 101 55 1 5 105 20 116 2.28e-24 99.4
MS.gene44527.t1 AT1G25340 41.584 101 55 1 5 105 20 116 3.13e-24 99.8
MS.gene44527.t1 AT5G16600 47.170 106 47 2 5 105 14 115 3.78e-24 99.8
MS.gene44527.t1 AT2G47460 44.860 107 58 1 5 110 14 120 5.33e-24 100
MS.gene44527.t1 AT4G12350 46.226 106 48 2 5 105 14 115 5.86e-24 98.6
MS.gene44527.t1 AT5G40350 42.017 119 63 2 5 117 19 137 6.03e-24 96.7
MS.gene44527.t1 AT3G01530 45.545 101 54 1 5 104 27 127 1.49e-23 95.5
MS.gene44527.t1 AT2G47190 43.810 105 58 1 2 105 19 123 1.61e-23 97.1
MS.gene44527.t1 AT5G35550 45.098 102 55 1 5 105 16 117 1.77e-23 96.7
MS.gene44527.t1 AT1G68320 41.176 102 59 1 5 105 21 122 2.93e-23 96.7
MS.gene44527.t1 AT5G52260 48.039 102 52 1 5 105 14 115 3.68e-23 95.9
MS.gene44527.t1 AT1G79180 35.135 148 54 2 5 114 16 159 4.36e-23 97.1
MS.gene44527.t1 AT1G48000 43.564 101 56 1 5 104 34 134 1.07e-22 94.4
MS.gene44527.t1 AT2G02820 40.816 98 58 0 8 105 33 130 1.05e-21 93.2
MS.gene44527.t1 AT2G26950 42.857 105 51 2 5 104 18 118 1.11e-21 93.6
MS.gene44527.t1 AT5G62320 44.144 111 50 3 5 105 15 123 1.18e-21 91.3
MS.gene44527.t1 AT2G02820 40.404 99 59 0 8 106 33 131 1.37e-21 94.0
MS.gene44527.t1 AT2G02820 40.404 99 59 0 8 106 33 131 1.71e-21 94.0
MS.gene44527.t1 AT1G66370 41.176 102 59 1 5 105 10 111 3.71e-21 90.1
MS.gene44527.t1 AT5G14750 52.941 68 32 0 38 105 18 85 7.58e-21 87.4
MS.gene44527.t1 AT5G26660 38.060 134 73 1 38 161 17 150 3.36e-20 89.0
MS.gene44527.t1 AT5G40430 39.806 103 61 1 2 104 51 152 4.98e-20 87.4
MS.gene44527.t1 AT5G49620 39.516 124 70 2 1 123 24 143 6.28e-20 87.8
MS.gene44527.t1 AT3G06490 40.323 124 69 2 1 123 17 136 8.89e-20 87.8
MS.gene44527.t1 AT1G14350 34.783 115 75 0 8 122 28 142 8.98e-20 89.0
MS.gene44527.t1 AT1G14350 34.783 115 75 0 8 122 28 142 8.98e-20 89.0
MS.gene44527.t1 AT3G27810 32.927 164 87 5 38 199 7 149 1.21e-19 84.3
MS.gene44527.t1 AT3G53200 55.882 68 30 0 38 105 12 79 1.52e-19 84.7
MS.gene44527.t1 AT5G59780 48.529 68 35 0 38 105 23 90 2.17e-19 84.7
MS.gene44527.t1 AT3G46130 48.529 68 35 0 38 105 13 80 5.05e-19 84.0
MS.gene44527.t1 AT3G46130 48.529 68 35 0 38 105 23 90 5.48e-19 84.0
MS.gene44527.t1 AT1G66380 43.137 102 57 1 5 105 10 111 5.94e-19 81.3
MS.gene44527.t1 AT5G35550 54.412 68 31 0 38 105 53 120 8.34e-19 84.0
MS.gene44527.t1 AT1G56650 40.496 121 67 3 5 121 10 129 1.44e-18 83.2
MS.gene44527.t1 AT3G12820 52.941 68 32 0 38 105 2 69 2.59e-18 81.3
MS.gene44527.t1 AT5G40350 43.529 85 43 1 38 117 8 92 3.43e-18 80.1
MS.gene44527.t1 AT1G66390 43.137 102 57 1 5 105 10 111 6.09e-18 81.3
MS.gene44527.t1 AT3G47600 46.067 89 39 2 38 117 42 130 1.10e-17 82.0
MS.gene44527.t1 AT3G18100 41.489 94 55 0 5 98 546 639 8.02e-17 80.9
MS.gene44527.t1 AT3G18100 41.489 94 55 0 5 98 498 591 8.74e-17 80.5
MS.gene44527.t1 AT3G18100 41.489 94 55 0 5 98 333 426 1.16e-16 80.1
MS.gene44527.t1 AT3G18100 41.489 94 55 0 5 98 385 478 1.17e-16 80.1
MS.gene44527.t1 AT1G71030 50.769 65 32 0 41 105 5 69 1.97e-16 75.9
MS.gene44527.t1 AT1G71030 50.769 65 32 0 41 105 19 83 2.13e-16 75.9
MS.gene44527.t1 AT5G49620 35.507 138 70 3 1 123 24 157 2.45e-16 78.2
MS.gene44527.t1 AT1G22640 32.298 161 89 5 49 200 2 151 1.23e-14 71.2
MS.gene44527.t1 AT1G18960 35.849 106 64 3 3 107 8 110 7.65e-14 70.9
MS.gene44527.t1 AT2G37630 38.298 94 55 1 8 98 7 100 8.23e-14 71.2
MS.gene44527.t1 AT5G14750 46.552 58 31 0 49 106 2 59 3.60e-13 65.9
MS.gene44527.t1 AT5G14750 46.552 58 31 0 49 106 2 59 3.60e-13 65.9
MS.gene44527.t1 AT1G66380 44.156 77 43 0 29 105 2 78 1.37e-12 63.2

Find 90 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTTGAGTGGTGAATTTA+TGG 0.181948 8.1:-26179555 MS.gene44527:CDS
GGTTCTGATTTAAGTGATTC+TGG 0.192097 8.1:-26179830 MS.gene44527:CDS
CTAAGCCAATTGGGATTAAC+AGG 0.244446 8.1:-26179433 MS.gene44527:CDS
GTTAAGGATTCGTCTTCTTC+GGG 0.287725 8.1:+26180208 None:intergenic
TGTTAAGGATTCGTCTTCTT+CGG 0.294025 8.1:+26180207 None:intergenic
CACAATAGCCCGTTTGTTAT+CGG 0.297526 8.1:-26179996 MS.gene44527:CDS
GAAAGCGACAGCGAAGTTAA+AGG 0.313723 8.1:+26179698 None:intergenic
TCCGCTTCCGTCGGTGCTCC+GGG 0.314757 8.1:-26179863 MS.gene44527:CDS
ATAATGATGTTATCTTCTTC+AGG 0.320050 8.1:+26180052 None:intergenic
CTCCGCTTCCGTCGGTGCTC+CGG 0.321200 8.1:-26179864 MS.gene44527:CDS
ATCGTTACGGTCCTCGTAAC+TGG 0.325319 8.1:-26180174 MS.gene44527:CDS
GGTGCTCCGGGGAGTCCTTC+TGG 0.325422 8.1:-26179851 MS.gene44527:CDS
CTCATCAGCCGTGCTATTCC+TGG 0.326073 8.1:-26180148 MS.gene44527:CDS
GCAGAAGTGGTAAATCTTGC+AGG 0.345819 8.1:-26180126 MS.gene44527:CDS
GAATGAAGTGAGGAGTTATA+TGG 0.356066 8.1:-26179510 MS.gene44527:CDS
GTTTCTGAAGAAGCTGGAAT+TGG 0.358307 8.1:-26179584 MS.gene44527:CDS
AATGTTTCTGCTAAGCCAAT+TGG 0.360539 8.1:-26179443 MS.gene44527:CDS
ATTGGGATTAACAGGGTTGA+TGG 0.384025 8.1:-26179425 MS.gene44527:CDS
ATGCTCAGTTCGGTAACAAA+TGG 0.391933 8.1:-26180021 MS.gene44527:CDS
GGTTACGGTGCCGGAGGCAG+TGG 0.397430 8.1:-26179735 MS.gene44527:CDS
ACAATAGCCCGTTTGTTATC+GGG 0.419316 8.1:-26179995 MS.gene44527:CDS
CGCCGCCACTGAAGCCGTTA+CGG 0.422898 8.1:+26179610 None:intergenic
ACAGGCAAACGAATCGGAAC+AGG 0.431816 8.1:+26179788 None:intergenic
GGCTCCGATGTAGTTTCAAC+AGG 0.447468 8.1:+26179770 None:intergenic
ATGTTTCTGCTAAGCCAATT+GGG 0.449436 8.1:-26179442 MS.gene44527:CDS
TCGTCTTCTTCGGGGCTCCA+TGG 0.449510 8.1:+26180217 None:intergenic
AGTTATATGGAAGAGAGAAA+TGG 0.450100 8.1:-26179497 MS.gene44527:CDS
TCAACCCTGTTAATCCCAAT+TGG 0.450454 8.1:+26179428 None:intergenic
TCGCTGTCGCTTTCTCTACC+AGG 0.454968 8.1:-26179689 MS.gene44527:CDS
GGCGATGGAGGTTACGGTGC+CGG 0.456055 8.1:-26179744 MS.gene44527:CDS
CCCCGGAGCACCGACGGAAG+CGG 0.458760 8.1:+26179862 None:intergenic
GTTGTTGGAGGAGGACTAAC+CGG 0.475495 8.1:+26179644 None:intergenic
GCCGGAGGCGATGGAGGTTA+CGG 0.475996 8.1:-26179750 MS.gene44527:CDS
TGCTCAGTTCGGTAACAAAT+GGG 0.476260 8.1:-26180020 MS.gene44527:CDS
TACATCGGAGCCGGAGGCGA+TGG 0.477002 8.1:-26179759 MS.gene44527:CDS
CGGTTCGGCCCGATAACAAA+CGG 0.483577 8.1:+26179987 None:intergenic
ATCAGAGCCCATGCTCAGTT+CGG 0.492188 8.1:-26180031 MS.gene44527:CDS
ACAAAACTCGTTGATCGTTA+CGG 0.493663 8.1:-26180187 MS.gene44527:CDS
GGTGCCGGAGGCAGTGGAGG+AGG 0.494219 8.1:-26179729 MS.gene44527:CDS
CGATAACAAACGGGCTATTG+TGG 0.501898 8.1:+26179997 None:intergenic
ATTTGTTACCGAACTGAGCA+TGG 0.503627 8.1:+26180023 None:intergenic
ACGGCAGTTACAGCGGTTGT+TGG 0.506684 8.1:+26179629 None:intergenic
CTTAAACGCTCCGCTTCCGT+CGG 0.510964 8.1:-26179872 MS.gene44527:CDS
GTTACAGCGGTTGTTGGAGG+AGG 0.511628 8.1:+26179635 None:intergenic
TACGGTGCCGGAGGCAGTGG+AGG 0.513406 8.1:-26179732 MS.gene44527:CDS
CGGAAGTGTTCGTCTTTCAT+CGG 0.515164 8.1:-26179926 MS.gene44527:CDS
GTTTCAACAGGCAAACGAAT+CGG 0.515533 8.1:+26179782 None:intergenic
CACAAAATGGATCGGATCAA+AGG 0.516697 8.1:-26180241 None:intergenic
ACCGTAACCTCCATCGCCTC+CGG 0.524352 8.1:+26179749 None:intergenic
TCATCCTCCTCCACTGCCTC+CGG 0.526186 8.1:+26179725 None:intergenic
AGGACTCCCCGGAGCACCGA+CGG 0.528402 8.1:+26179856 None:intergenic
CAAGATTTACCACTTCTGCC+AGG 0.532045 8.1:+26180130 None:intergenic
GCGAAAGTTTCTGAAGAAGC+TGG 0.536187 8.1:-26179590 MS.gene44527:CDS
GCAGTTACAGCGGTTGTTGG+AGG 0.537888 8.1:+26179632 None:intergenic
ACTGGAATTCGACACTGAAA+CGG 0.538291 8.1:-26179946 MS.gene44527:CDS
TCAGAACCAGAAGGACTCCC+CGG 0.552415 8.1:+26179845 None:intergenic
GCGGAGCGTTTAAGCGGCTG+AGG 0.552710 8.1:+26179881 None:intergenic
TGCCGTAACGGCTTCAGTGG+CGG 0.554136 8.1:-26179612 MS.gene44527:CDS
AGGATTGAAATCACGATCAT+CGG 0.558324 8.1:+26179901 None:intergenic
AACCGCTGTAACTGCCGTAA+CGG 0.559234 8.1:-26179624 MS.gene44527:CDS
AGATGATAAAGAATGAAGTG+AGG 0.560968 8.1:-26179520 MS.gene44527:CDS
TGTTGAAACTACATCGGAGC+CGG 0.564862 8.1:-26179768 MS.gene44527:CDS
GTAAATCTTGCAGGCTGAGA+TGG 0.565392 8.1:-26180117 MS.gene44527:CDS
GGATGCTGCTGCGACGGTGC+CGG 0.565601 8.1:-26179663 MS.gene44527:CDS
GGTTCGGCCCGATAACAAAC+GGG 0.570930 8.1:+26179988 None:intergenic
GTCGCAGCAGCATCCACACC+TGG 0.571853 8.1:+26179671 None:intergenic
TTTGTTACCGAACTGAGCAT+GGG 0.585042 8.1:+26180024 None:intergenic
GTCGCTTTCTCTACCAGGTG+TGG 0.586924 8.1:-26179684 MS.gene44527:CDS
ATCGGAGCCGGAGGCGATGG+AGG 0.592565 8.1:-26179756 MS.gene44527:CDS
AGGTGTGGATGCTGCTGCGA+CGG 0.598215 8.1:-26179669 MS.gene44527:CDS
AACTGCCGTAACGGCTTCAG+TGG 0.600528 8.1:-26179615 MS.gene44527:CDS
TGGATCGGATCAAAGGTCCA+TGG 0.602703 8.1:-26180234 MS.gene44527:CDS
GAGGCAGTGGAGGAGGATGA+CGG 0.602949 8.1:-26179722 MS.gene44527:CDS
TCATCACTCACAAAATGGAT+CGG 0.604942 8.1:-26180249 None:intergenic
TTTGAGTGGTGAATTTATGG+CGG 0.605749 8.1:-26179552 MS.gene44527:CDS
CGTGCTATTCCTGGCAGAAG+TGG 0.606057 8.1:-26180139 MS.gene44527:CDS
GTTTCAGTGTCGAATTCCAG+TGG 0.610246 8.1:+26179948 None:intergenic
AAAGCACGATGCTCAACTTG+AGG 0.613981 8.1:+26180079 None:intergenic
TTAAGGATTCGTCTTCTTCG+GGG 0.616493 8.1:+26180209 None:intergenic
TTTGCCTGTTGAAACTACAT+CGG 0.619768 8.1:-26179774 MS.gene44527:CDS
ACGGAAGCGGAGCGTTTAAG+CGG 0.625069 8.1:+26179875 None:intergenic
CACTTCTGCCAGGAATAGCA+CGG 0.635899 8.1:+26180140 None:intergenic
CCGCTTCCGTCGGTGCTCCG+GGG 0.641525 8.1:-26179862 MS.gene44527:CDS
GATGGAGGTTACGGTGCCGG+AGG 0.646652 8.1:-26179741 MS.gene44527:CDS
ATTGGAGCGTTAAATTTGAG+TGG 0.650281 8.1:-26179566 MS.gene44527:CDS
AGCCGTTACGGCAGTTACAG+CGG 0.654298 8.1:+26179622 None:intergenic
TGAAACTACATCGGAGCCGG+AGG 0.656246 8.1:-26179765 MS.gene44527:CDS
TCACTTAAATCAGAACCAGA+AGG 0.658744 8.1:+26179836 None:intergenic
TAAGCCAATTGGGATTAACA+GGG 0.674454 8.1:-26179432 MS.gene44527:CDS
CTGATGAGTGACCAGTTACG+AGG 0.676012 8.1:+26180163 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAATTTGAGTGGTGAATTTA+TGG - chr8.1:26180101-26180120 MS.gene44527:CDS 25.0%
! ATAATGATGTTATCTTCTTC+AGG + chr8.1:26179607-26179626 None:intergenic 25.0%
AGATGATAAAGAATGAAGTG+AGG - chr8.1:26180136-26180155 MS.gene44527:CDS 30.0%
AGTTATATGGAAGAGAGAAA+TGG - chr8.1:26180159-26180178 MS.gene44527:CDS 30.0%
! AGAAATGGAATGTGTTTTCA+AGG - chr8.1:26180174-26180193 MS.gene44527:CDS 30.0%
ACAAAACTCGTTGATCGTTA+CGG - chr8.1:26179469-26179488 MS.gene44527:CDS 35.0%
AGGATTGAAATCACGATCAT+CGG + chr8.1:26179758-26179777 None:intergenic 35.0%
ATAACGCTATCAAAAACCAC+TGG - chr8.1:26179692-26179711 MS.gene44527:CDS 35.0%
GAATGAAGTGAGGAGTTATA+TGG - chr8.1:26180146-26180165 MS.gene44527:CDS 35.0%
TAAGCCAATTGGGATTAACA+GGG - chr8.1:26180224-26180243 MS.gene44527:CDS 35.0%
TCACTTAAATCAGAACCAGA+AGG + chr8.1:26179823-26179842 None:intergenic 35.0%
TGTTAAGGATTCGTCTTCTT+CGG + chr8.1:26179452-26179471 None:intergenic 35.0%
TTTGAGTGGTGAATTTATGG+CGG - chr8.1:26180104-26180123 MS.gene44527:CDS 35.0%
TTTGCCTGTTGAAACTACAT+CGG - chr8.1:26179882-26179901 MS.gene44527:CDS 35.0%
! AATGTTTCTGCTAAGCCAAT+TGG - chr8.1:26180213-26180232 MS.gene44527:CDS 35.0%
! ATGTTTCTGCTAAGCCAATT+GGG - chr8.1:26180214-26180233 MS.gene44527:CDS 35.0%
! ATTGGAGCGTTAAATTTGAG+TGG - chr8.1:26180090-26180109 MS.gene44527:CDS 35.0%
! GGTTCTGATTTAAGTGATTC+TGG - chr8.1:26179826-26179845 MS.gene44527:CDS 35.0%
!! TGTGTTTTCAAGGAGTTGAT+AGG - chr8.1:26180184-26180203 MS.gene44527:CDS 35.0%
!!! ACGATCAACGAGTTTTGTTA+AGG + chr8.1:26179467-26179486 None:intergenic 35.0%
!!! GTGGTTTTTGATAGCGTTAT+CGG + chr8.1:26179692-26179711 None:intergenic 35.0%
!!! TTTTGATAGCGTTATCGGTT+CGG + chr8.1:26179687-26179706 None:intergenic 35.0%
ACTGGAATTCGACACTGAAA+CGG - chr8.1:26179710-26179729 MS.gene44527:CDS 40.0%
ATGCTCAGTTCGGTAACAAA+TGG - chr8.1:26179635-26179654 MS.gene44527:CDS 40.0%
ATTGGGATTAACAGGGTTGA+TGG - chr8.1:26180231-26180250 MS.gene44527:CDS 40.0%
CTAAGCCAATTGGGATTAAC+AGG - chr8.1:26180223-26180242 MS.gene44527:CDS 40.0%
GTTAAGGATTCGTCTTCTTC+GGG + chr8.1:26179451-26179470 None:intergenic 40.0%
GTTTCAACAGGCAAACGAAT+CGG + chr8.1:26179877-26179896 None:intergenic 40.0%
TCAACCCTGTTAATCCCAAT+TGG + chr8.1:26180231-26180250 None:intergenic 40.0%
TGCTCAGTTCGGTAACAAAT+GGG - chr8.1:26179636-26179655 MS.gene44527:CDS 40.0%
TTAAGGATTCGTCTTCTTCG+GGG + chr8.1:26179450-26179469 None:intergenic 40.0%
TTTGTTACCGAACTGAGCAT+GGG + chr8.1:26179635-26179654 None:intergenic 40.0%
! ATTTGTTACCGAACTGAGCA+TGG + chr8.1:26179636-26179655 None:intergenic 40.0%
! GTTTCTGAAGAAGCTGGAAT+TGG - chr8.1:26180072-26180091 MS.gene44527:CDS 40.0%
!! ACAATAGCCCGTTTGTTATC+GGG - chr8.1:26179661-26179680 MS.gene44527:CDS 40.0%
!! CACAATAGCCCGTTTGTTAT+CGG - chr8.1:26179660-26179679 MS.gene44527:CDS 40.0%
AAAGCACGATGCTCAACTTG+AGG + chr8.1:26179580-26179599 None:intergenic 45.0%
CAAGATTTACCACTTCTGCC+AGG + chr8.1:26179529-26179548 None:intergenic 45.0%
GAAAGCGACAGCGAAGTTAA+AGG + chr8.1:26179961-26179980 None:intergenic 45.0%
GCAGAAGTGGTAAATCTTGC+AGG - chr8.1:26179530-26179549 MS.gene44527:CDS 45.0%
GTAAATCTTGCAGGCTGAGA+TGG - chr8.1:26179539-26179558 MS.gene44527:CDS 45.0%
TGTTGAAACTACATCGGAGC+CGG - chr8.1:26179888-26179907 MS.gene44527:CDS 45.0%
! GCGAAAGTTTCTGAAGAAGC+TGG - chr8.1:26180066-26180085 MS.gene44527:CDS 45.0%
! GTTTCAGTGTCGAATTCCAG+TGG + chr8.1:26179711-26179730 None:intergenic 45.0%
!! CGATAACAAACGGGCTATTG+TGG + chr8.1:26179662-26179681 None:intergenic 45.0%
!! CGGAAGTGTTCGTCTTTCAT+CGG - chr8.1:26179730-26179749 MS.gene44527:CDS 45.0%
AACCGCTGTAACTGCCGTAA+CGG - chr8.1:26180032-26180051 MS.gene44527:CDS 50.0%
ACAGGCAAACGAATCGGAAC+AGG + chr8.1:26179871-26179890 None:intergenic 50.0%
ATCAGAGCCCATGCTCAGTT+CGG - chr8.1:26179625-26179644 MS.gene44527:CDS 50.0%
ATCGTTACGGTCCTCGTAAC+TGG - chr8.1:26179482-26179501 MS.gene44527:CDS 50.0%
CACTTCTGCCAGGAATAGCA+CGG + chr8.1:26179519-26179538 None:intergenic 50.0%
CTGATGAGTGACCAGTTACG+AGG + chr8.1:26179496-26179515 None:intergenic 50.0%
GGCTCCGATGTAGTTTCAAC+AGG + chr8.1:26179889-26179908 None:intergenic 50.0%
GTTGTTGGAGGAGGACTAAC+CGG + chr8.1:26180015-26180034 None:intergenic 50.0%
TGGATCGGATCAAAGGTCCA+TGG - chr8.1:26179422-26179441 MS.gene44527:CDS 50.0%
AACTGCCGTAACGGCTTCAG+TGG - chr8.1:26180041-26180060 MS.gene44527:CDS 55.0%
ACGGCAGTTACAGCGGTTGT+TGG + chr8.1:26180030-26180049 None:intergenic 55.0%
AGCCGTTACGGCAGTTACAG+CGG + chr8.1:26180037-26180056 None:intergenic 55.0%
CTTAAACGCTCCGCTTCCGT+CGG - chr8.1:26179784-26179803 MS.gene44527:CDS 55.0%
GCAGTTACAGCGGTTGTTGG+AGG + chr8.1:26180027-26180046 None:intergenic 55.0%
GGTTCGGCCCGATAACAAAC+GGG + chr8.1:26179671-26179690 None:intergenic 55.0%
GTTACAGCGGTTGTTGGAGG+AGG + chr8.1:26180024-26180043 None:intergenic 55.0%
TCAGAACCAGAAGGACTCCC+CGG + chr8.1:26179814-26179833 None:intergenic 55.0%
TGAAACTACATCGGAGCCGG+AGG - chr8.1:26179891-26179910 MS.gene44527:CDS 55.0%
! ACGGAAGCGGAGCGTTTAAG+CGG + chr8.1:26179784-26179803 None:intergenic 55.0%
! CGGTTCGGCCCGATAACAAA+CGG + chr8.1:26179672-26179691 None:intergenic 55.0%
! CGTGCTATTCCTGGCAGAAG+TGG - chr8.1:26179517-26179536 MS.gene44527:CDS 55.0%
! CTCATCAGCCGTGCTATTCC+TGG - chr8.1:26179508-26179527 MS.gene44527:CDS 55.0%
! GTCGCTTTCTCTACCAGGTG+TGG - chr8.1:26179972-26179991 MS.gene44527:CDS 55.0%
!! TCGCTGTCGCTTTCTCTACC+AGG - chr8.1:26179967-26179986 MS.gene44527:CDS 55.0%
ACCGTAACCTCCATCGCCTC+CGG + chr8.1:26179910-26179929 None:intergenic 60.0%
AGGTGTGGATGCTGCTGCGA+CGG - chr8.1:26179987-26180006 MS.gene44527:CDS 60.0%
GAGGCAGTGGAGGAGGATGA+CGG - chr8.1:26179934-26179953 MS.gene44527:CDS 60.0%
TCATCCTCCTCCACTGCCTC+CGG + chr8.1:26179934-26179953 None:intergenic 60.0%
TCGTCTTCTTCGGGGCTCCA+TGG + chr8.1:26179442-26179461 None:intergenic 60.0%
TGCCGTAACGGCTTCAGTGG+CGG - chr8.1:26180044-26180063 MS.gene44527:CDS 60.0%
CGCCGCCACTGAAGCCGTTA+CGG + chr8.1:26180049-26180068 None:intergenic 65.0%
GCCGGAGGCGATGGAGGTTA+CGG - chr8.1:26179906-26179925 MS.gene44527:CDS 65.0%
GGCGATGGAGGTTACGGTGC+CGG - chr8.1:26179912-26179931 MS.gene44527:CDS 65.0%
GTCGCAGCAGCATCCACACC+TGG + chr8.1:26179988-26180007 None:intergenic 65.0%
TACATCGGAGCCGGAGGCGA+TGG - chr8.1:26179897-26179916 MS.gene44527:CDS 65.0%
! GATGGAGGTTACGGTGCCGG+AGG - chr8.1:26179915-26179934 MS.gene44527:CDS 65.0%
! GCGGAGCGTTTAAGCGGCTG+AGG + chr8.1:26179778-26179797 None:intergenic 65.0%
ATCGGAGCCGGAGGCGATGG+AGG - chr8.1:26179900-26179919 MS.gene44527:CDS 70.0%
GGATGCTGCTGCGACGGTGC+CGG - chr8.1:26179993-26180012 MS.gene44527:CDS 70.0%
GGTGCTCCGGGGAGTCCTTC+TGG - chr8.1:26179805-26179824 MS.gene44527:CDS 70.0%
! CTCCGCTTCCGTCGGTGCTC+CGG - chr8.1:26179792-26179811 MS.gene44527:CDS 70.0%
! GGTTACGGTGCCGGAGGCAG+TGG - chr8.1:26179921-26179940 MS.gene44527:CDS 70.0%
! TACGGTGCCGGAGGCAGTGG+AGG - chr8.1:26179924-26179943 MS.gene44527:CDS 70.0%
! TCCGCTTCCGTCGGTGCTCC+GGG - chr8.1:26179793-26179812 MS.gene44527:CDS 70.0%
!! AGGACTCCCCGGAGCACCGA+CGG + chr8.1:26179803-26179822 None:intergenic 70.0%
! CCGCTTCCGTCGGTGCTCCG+GGG - chr8.1:26179794-26179813 MS.gene44527:CDS 75.0%
! GGTGCCGGAGGCAGTGGAGG+AGG - chr8.1:26179927-26179946 MS.gene44527:CDS 75.0%
!! CCCCGGAGCACCGACGGAAG+CGG + chr8.1:26179797-26179816 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 26179421 26180257 26179421 ID=MS.gene44527
chr8.1 mRNA 26179421 26180257 26179421 ID=MS.gene44527.t1;Parent=MS.gene44527
chr8.1 exon 26179421 26180257 26179421 ID=MS.gene44527.t1.exon1;Parent=MS.gene44527.t1
chr8.1 CDS 26179421 26180257 26179421 ID=cds.MS.gene44527.t1;Parent=MS.gene44527.t1
Gene Sequence

>MS.gene44527

ATGGATCGGATCAAAGGTCCATGGAGCCCCGAAGAAGACGAATCCTTAACAAAACTCGTTGATCGTTACGGTCCTCGTAACTGGTCACTCATCAGCCGTGCTATTCCTGGCAGAAGTGGTAAATCTTGCAGGCTGAGATGGTGTAATCAGCTTTCTCCTCAAGTTGAGCATCGTGCTTTTTCTCCTGAAGAAGATAACATCATTATCAGAGCCCATGCTCAGTTCGGTAACAAATGGGCCACAATAGCCCGTTTGTTATCGGGCCGAACCGATAACGCTATCAAAAACCACTGGAATTCGACACTGAAACGGAAGTGTTCGTCTTTCATCGGTTCCGATGATCGTGATTTCAATCCTCAGCCGCTTAAACGCTCCGCTTCCGTCGGTGCTCCGGGGAGTCCTTCTGGTTCTGATTTAAGTGATTCTGGTGTTCAAACTGTTTTTCGTCCTGTTCCGATTCGTTTGCCTGTTGAAACTACATCGGAGCCGGAGGCGATGGAGGTTACGGTGCCGGAGGCAGTGGAGGAGGATGACGGTCCTTTAACTTCGCTGTCGCTTTCTCTACCAGGTGTGGATGCTGCTGCGACGGTGCCGGTTAGTCCTCCTCCAACAACCGCTGTAACTGCCGTAACGGCTTCAGTGGCGGCGAAAGTTTCTGAAGAAGCTGGAATTGGAGCGTTAAATTTGAGTGGTGAATTTATGGCGGTTATGCAAGAGATGATAAAGAATGAAGTGAGGAGTTATATGGAAGAGAGAAATGGAATGTGTTTTCAAGGAGTTGATAGGCTTAGAAATGTTTCTGCTAAGCCAATTGGGATTAACAGGGTTGATGGATGA
Protein sequence

>MS.gene44527.t1

MDRIKGPWSPEEDESLTKLVDRYGPRNWSLISRAIPGRSGKSCRLRWCNQLSPQVEHRAFSPEEDNIIIRAHAQFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSFIGSDDRDFNPQPLKRSASVGAPGSPSGSDLSDSGVQTVFRPVPIRLPVETTSEPEAMEVTVPEAVEEDDGPLTSLSLSLPGVDAAATVPVSPPPTTAVTAVTASVAAKVSEEAGIGALNLSGEFMAVMQEMIKNEVRSYMEERNGMCFQGVDRLRNVSAKPIGINRVDG