Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44707.t1 | KEH21752.1 | 72.6 | 157 | 26 | 3 | 10 | 165 | 18 | 158 | 1.20E-23 | 120.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44707.t1 | Q9M7Q4 | 51.2 | 80 | 24 | 3 | 88 | 167 | 310 | 374 | 1.5e-06 | 54.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44707.t1 | A0A072TWD0 | 72.6 | 157 | 26 | 3 | 10 | 165 | 18 | 158 | 8.7e-24 | 120.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene44707.t1 | TF | bZIP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44707.t1 | MTR_7g015990 | 70.115 | 174 | 35 | 3 | 10 | 182 | 18 | 175 | 1.82e-72 | 218 |
MS.gene44707.t1 | MTR_5g022780 | 55.513 | 263 | 43 | 8 | 1 | 215 | 1 | 237 | 7.75e-68 | 208 |
MS.gene44707.t1 | MTR_8g075130 | 69.231 | 52 | 14 | 1 | 125 | 176 | 105 | 154 | 2.04e-14 | 68.9 |
MS.gene44707.t1 | MTR_3g101780 | 40.984 | 122 | 55 | 4 | 88 | 209 | 324 | 428 | 3.02e-13 | 68.2 |
MS.gene44707.t1 | MTR_7g088090 | 34.946 | 186 | 87 | 8 | 13 | 173 | 116 | 292 | 6.94e-13 | 66.6 |
MS.gene44707.t1 | MTR_4g085910 | 39.200 | 125 | 41 | 4 | 70 | 177 | 242 | 348 | 4.12e-12 | 64.7 |
MS.gene44707.t1 | MTR_3g010660 | 45.283 | 106 | 41 | 4 | 78 | 176 | 202 | 297 | 9.28e-12 | 63.5 |
MS.gene44707.t1 | MTR_8g043960 | 34.078 | 179 | 90 | 7 | 13 | 176 | 123 | 288 | 1.54e-11 | 62.8 |
MS.gene44707.t1 | MTR_2g086390 | 52.381 | 63 | 21 | 2 | 125 | 183 | 210 | 267 | 4.51e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44707.t1 | AT1G45249 | 45.082 | 122 | 49 | 4 | 88 | 209 | 310 | 413 | 1.45e-15 | 75.1 |
MS.gene44707.t1 | AT1G45249 | 45.082 | 122 | 49 | 4 | 88 | 209 | 325 | 428 | 1.63e-15 | 74.7 |
MS.gene44707.t1 | AT1G45249 | 45.082 | 122 | 49 | 4 | 88 | 209 | 325 | 428 | 1.63e-15 | 74.7 |
MS.gene44707.t1 | AT4G35900 | 58.824 | 68 | 23 | 1 | 110 | 177 | 200 | 262 | 2.26e-15 | 73.6 |
MS.gene44707.t1 | AT2G17770 | 54.795 | 73 | 28 | 1 | 105 | 177 | 105 | 172 | 5.62e-15 | 70.9 |
MS.gene44707.t1 | AT1G45249 | 42.969 | 128 | 54 | 4 | 88 | 209 | 310 | 424 | 1.11e-14 | 72.4 |
MS.gene44707.t1 | AT3G56850 | 71.154 | 52 | 10 | 1 | 125 | 176 | 226 | 272 | 8.27e-13 | 66.2 |
MS.gene44707.t1 | AT4G34000 | 45.283 | 106 | 36 | 4 | 87 | 191 | 347 | 431 | 8.99e-13 | 67.0 |
MS.gene44707.t1 | AT4G34000 | 45.283 | 106 | 36 | 4 | 87 | 191 | 347 | 431 | 8.99e-13 | 67.0 |
MS.gene44707.t1 | AT4G34000 | 45.283 | 106 | 36 | 4 | 87 | 191 | 347 | 431 | 8.99e-13 | 67.0 |
MS.gene44707.t1 | AT2G41070 | 73.469 | 49 | 8 | 1 | 125 | 173 | 191 | 234 | 6.43e-12 | 63.2 |
MS.gene44707.t1 | AT2G36270 | 50.000 | 82 | 28 | 3 | 125 | 198 | 356 | 432 | 7.12e-12 | 64.3 |
MS.gene44707.t1 | AT2G36270 | 50.000 | 82 | 28 | 3 | 125 | 198 | 356 | 432 | 7.12e-12 | 64.3 |
MS.gene44707.t1 | AT2G41070 | 73.469 | 49 | 8 | 1 | 125 | 173 | 200 | 243 | 9.29e-12 | 63.2 |
MS.gene44707.t1 | AT2G41070 | 73.469 | 49 | 8 | 1 | 125 | 173 | 191 | 234 | 9.69e-12 | 63.2 |
MS.gene44707.t1 | AT2G41070 | 73.469 | 49 | 8 | 1 | 125 | 173 | 191 | 234 | 9.69e-12 | 63.2 |
MS.gene44707.t1 | AT2G41070 | 73.469 | 49 | 8 | 1 | 125 | 173 | 191 | 234 | 9.69e-12 | 63.2 |
MS.gene44707.t1 | AT4G34000 | 45.556 | 90 | 30 | 3 | 87 | 175 | 347 | 418 | 5.36e-11 | 61.6 |
Find 35 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAAGAATAATCGATGCTTT+TGG | 0.258209 | 7.2:+81637481 | None:intergenic |
TCTAATTCTTTCATTTCTTT+TGG | 0.267657 | 7.2:-81637272 | MS.gene44707:CDS |
AGTACTCGTAATTGTACTTT+TGG | 0.310858 | 7.2:-81637554 | MS.gene44707:CDS |
CTCTTGGTGCAGAAATGTTT+TGG | 0.329983 | 7.2:+81637348 | None:intergenic |
CCATGGAAGAGGTGTGGAAT+TGG | 0.340299 | 7.2:-81637586 | MS.gene44707:CDS |
CATTGAACTAGGGCAATAAA+AGG | 0.373167 | 7.2:+81637409 | None:intergenic |
ATAAGAGGATGATCAAGAAT+CGG | 0.446318 | 7.2:-81637202 | MS.gene44707:CDS |
AGAGCAGCAAGTTCAACTAT+TGG | 0.448847 | 7.2:-81636575 | MS.gene44707:CDS |
GCAGAAAGTTCAGCTATTGC+AGG | 0.451038 | 7.2:-81635832 | MS.gene44707:CDS |
TTTGGGTGGGTCTGAAGTGA+GGG | 0.456936 | 7.2:+81637499 | None:intergenic |
GGTGGTGGGGTCATTGAACT+AGG | 0.467177 | 7.2:+81637398 | None:intergenic |
CTTGAGTGTGAAAGTCTTGA+AGG | 0.469462 | 7.2:+81637522 | None:intergenic |
TTTACGCTCGCAGAAACTCT+TGG | 0.496653 | 7.2:+81637332 | None:intergenic |
TAAGAGGATGATCAAGAATC+GGG | 0.505249 | 7.2:-81637201 | MS.gene44707:CDS |
CCAATTCCACACCTCTTCCA+TGG | 0.509593 | 7.2:+81637586 | None:intergenic |
ACTTCGAAAACAGCAACAAA+AGG | 0.525175 | 7.2:-81635796 | MS.gene44707:intron |
TCTTATTTCTCCTTTCACTA+CGG | 0.532558 | 7.2:+81637219 | None:intergenic |
GCGTTCACGAGCTAGAAAAC+AGG | 0.535637 | 7.2:-81637168 | MS.gene44707:CDS |
AAATCAGTGACAAGAGGTGG+TGG | 0.542421 | 7.2:+81637383 | None:intergenic |
AAAGAAGTTAACCATGGAAG+AGG | 0.555448 | 7.2:-81637597 | None:intergenic |
ATCAGTGACAAGAGGTGGTG+GGG | 0.566918 | 7.2:+81637385 | None:intergenic |
ACACCCACATTCTGATCATA+CGG | 0.580440 | 7.2:+81637302 | None:intergenic |
AATCAGTGACAAGAGGTGGT+GGG | 0.581910 | 7.2:+81637384 | None:intergenic |
CTGATATTAGCCGTAGTGAA+AGG | 0.586903 | 7.2:-81637229 | MS.gene44707:CDS |
GCAGCAAGTTCAACTATTGG+AGG | 0.594793 | 7.2:-81636572 | MS.gene44707:CDS |
AGTTAACCATGGAAGAGGTG+TGG | 0.606460 | 7.2:-81637592 | None:intergenic |
ACTTAGAAGACAGCAACAAG+AGG | 0.615687 | 7.2:-81636536 | MS.gene44707:intron |
TTCACCGTATGATCAGAATG+TGG | 0.616125 | 7.2:-81637306 | MS.gene44707:CDS |
TCACCGTATGATCAGAATGT+GGG | 0.625766 | 7.2:-81637305 | MS.gene44707:CDS |
GTAGTGAAAGGAGAAATAAG+AGG | 0.627501 | 7.2:-81637217 | MS.gene44707:CDS |
AAGTGAAAATCAGTGACAAG+AGG | 0.634779 | 7.2:+81637377 | None:intergenic |
TGAAAATCAGTGACAAGAGG+TGG | 0.635276 | 7.2:+81637380 | None:intergenic |
TTACGGGAAGCAGAAAGCGT+TGG | 0.638395 | 7.2:-81635544 | MS.gene44707:CDS |
ACATTCTGATCATACGGTGA+AGG | 0.644907 | 7.2:+81637308 | None:intergenic |
GTGGTGGGGTCATTGAACTA+GGG | 0.655781 | 7.2:+81637399 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATTAATTAGAGTTATAA+AGG | - | chr7.2:81637104-81637123 | MS.gene44707:intron | 10.0% |
!! | TATTTAGAAATATATTAAAC+GGG | + | chr7.2:81636313-81636332 | None:intergenic | 10.0% |
!!! | TTAGGTTTTTTTATTTTTTT+GGG | - | chr7.2:81637528-81637547 | MS.gene44707:CDS | 10.0% |
!!! | TTTAGGTTTTTTTATTTTTT+TGG | - | chr7.2:81637527-81637546 | MS.gene44707:CDS | 10.0% |
!! | AAAGTTATATAAAACAGTAT+TGG | + | chr7.2:81636086-81636105 | None:intergenic | 15.0% |
!! | ATTTAGAAATATATTAAACG+GGG | + | chr7.2:81636312-81636331 | None:intergenic | 15.0% |
!! | GAAAAAAAATGTGATATATT+TGG | + | chr7.2:81637415-81637434 | None:intergenic | 15.0% |
!! | TATTGTATTAGAAAATGAAA+TGG | - | chr7.2:81637141-81637160 | MS.gene44707:intron | 15.0% |
!! | TTCAAAAAAAAATTATGATG+TGG | - | chr7.2:81636807-81636826 | MS.gene44707:intron | 15.0% |
!!! | AAAGTTTTATTTGTATATTG+TGG | - | chr7.2:81636357-81636376 | MS.gene44707:intron | 15.0% |
!!! | AATGAACAATAACTTTTTTT+GGG | + | chr7.2:81636906-81636925 | None:intergenic | 15.0% |
!!! | GTTTTTTTTTTTTGAAAGAA+AGG | - | chr7.2:81636399-81636418 | MS.gene44707:intron | 15.0% |
!!! | TAATGAACAATAACTTTTTT+TGG | + | chr7.2:81636907-81636926 | None:intergenic | 15.0% |
!!! | TATGTATTTGGTATAAATTT+TGG | - | chr7.2:81636664-81636683 | MS.gene44707:intron | 15.0% |
!! | AAACATACATTTATGATTGT+GGG | - | chr7.2:81635997-81636016 | MS.gene44707:intron | 20.0% |
!! | AACATAAAATATTTACGATG+TGG | - | chr7.2:81636783-81636802 | MS.gene44707:intron | 20.0% |
!! | ACAAATTAAAGACAATGAAA+TGG | + | chr7.2:81637354-81637373 | None:intergenic | 20.0% |
!! | ACAAATTAAAGAGAATGAAA+TGG | + | chr7.2:81636614-81636633 | None:intergenic | 20.0% |
!! | ACAATCATAAATGTATGTTT+AGG | + | chr7.2:81635997-81636016 | None:intergenic | 20.0% |
!! | CAAATTAAAGACAATGAAAT+GGG | + | chr7.2:81637353-81637372 | None:intergenic | 20.0% |
!! | CAAATTAAAGAGAATGAAAT+GGG | + | chr7.2:81636613-81636632 | None:intergenic | 20.0% |
!! | TAAACATACATTTATGATTG+TGG | - | chr7.2:81635996-81636015 | MS.gene44707:intron | 20.0% |
!! | TAAGACAAATGTATAAACAA+AGG | - | chr7.2:81636982-81637001 | MS.gene44707:intron | 20.0% |
!! | TTTAGAAATATATTAAACGG+GGG | + | chr7.2:81636311-81636330 | None:intergenic | 20.0% |
!!! | GGTGAAATTTTTTATGTATT+TGG | - | chr7.2:81636652-81636671 | MS.gene44707:intron | 20.0% |
!!! | TAAATGTATGTTTAGGTTAT+TGG | + | chr7.2:81635990-81636009 | None:intergenic | 20.0% |
!!! | TATATAAAACAGTATTGGTA+GGG | + | chr7.2:81636081-81636100 | None:intergenic | 20.0% |
!!! | TCTAATTCTTTCATTTCTTT+TGG | - | chr7.2:81635840-81635859 | MS.gene44707:CDS | 20.0% |
!!! | TTATATAAAACAGTATTGGT+AGG | + | chr7.2:81636082-81636101 | None:intergenic | 20.0% |
! | ATAATTCGGTTAATTCGAAA+CGG | + | chr7.2:81636943-81636962 | None:intergenic | 25.0% |
! | ATGATTTAATTGAATACGTG+CGG | + | chr7.2:81636203-81636222 | None:intergenic | 25.0% |
! | GAGTATGCTTATAACATAAA+AGG | - | chr7.2:81636421-81636440 | MS.gene44707:intron | 25.0% |
! | TAACTGTTCTTGTTAAGTAT+TGG | - | chr7.2:81637022-81637041 | MS.gene44707:intron | 25.0% |
! | TATGCTTATAACATAAAAGG+TGG | - | chr7.2:81636424-81636443 | MS.gene44707:intron | 25.0% |
! | TATTTGTATATTGTGGTGAA+AGG | - | chr7.2:81636364-81636383 | MS.gene44707:intron | 25.0% |
!! | ATTGATTCATTTACTTAGTG+TGG | - | chr7.2:81637228-81637247 | MS.gene44707:CDS | 25.0% |
!! | TGTTCTTTTCAGTCAAAAAA+TGG | - | chr7.2:81636631-81636650 | MS.gene44707:intron | 25.0% |
!!! | ATATAAAACAGTATTGGTAG+GGG | + | chr7.2:81636080-81636099 | None:intergenic | 25.0% |
!!! | GATTCATTTACTTTTTTGTG+TGG | - | chr7.2:81636488-81636507 | MS.gene44707:intron | 25.0% |
ATAAGAGGATGATCAAGAAT+CGG | - | chr7.2:81635910-81635929 | MS.gene44707:intron | 30.0% | |
ATACATTTATGATTGTGGGT+GGG | - | chr7.2:81636001-81636020 | MS.gene44707:intron | 30.0% | |
GAGATATAATGAATTGAGAG+TGG | - | chr7.2:81637074-81637093 | MS.gene44707:intron | 30.0% | |
GTACTAGTAGGATTGAATTT+AGG | - | chr7.2:81637510-81637529 | MS.gene44707:CDS | 30.0% | |
TCACTTTGCATTTATGTTAG+TGG | + | chr7.2:81637056-81637075 | None:intergenic | 30.0% | |
TGTGAAATGCGCAAATAATT+CGG | + | chr7.2:81636957-81636976 | None:intergenic | 30.0% | |
! | AGAAGAATAATCGATGCTTT+TGG | + | chr7.2:81635634-81635653 | None:intergenic | 30.0% |
! | AGTACTCGTAATTGTACTTT+TGG | - | chr7.2:81635558-81635577 | MS.gene44707:intron | 30.0% |
! | GAAGAATAATCGATGCTTTT+GGG | + | chr7.2:81635633-81635652 | None:intergenic | 30.0% |
! | TCTTATTTCTCCTTTCACTA+CGG | + | chr7.2:81635896-81635915 | None:intergenic | 30.0% |
! | TTACTTAGTGTGGTTATTTC+AGG | - | chr7.2:81637238-81637257 | MS.gene44707:CDS | 30.0% |
!! | ATTTTGATCTGAAGCAAAGA+AGG | + | chr7.2:81635670-81635689 | None:intergenic | 30.0% |
!!! | CTTTTTTGTGTGGTTATTTC+AGG | - | chr7.2:81636498-81636517 | MS.gene44707:intron | 30.0% |
AAACAAAGGAGAGAGAAAAG+TGG | - | chr7.2:81636996-81637015 | MS.gene44707:intron | 35.0% | |
AACTAACATGTTGCAAGTGT+TGG | - | chr7.2:81636831-81636850 | MS.gene44707:intron | 35.0% | |
AAGTGAAAATCAGTGACAAG+AGG | + | chr7.2:81635738-81635757 | None:intergenic | 35.0% | |
ACTTCGAAAACAGCAACAAA+AGG | - | chr7.2:81637316-81637335 | MS.gene44707:CDS | 35.0% | |
CAATTCCACATAGTACTAGT+AGG | - | chr7.2:81637498-81637517 | MS.gene44707:CDS | 35.0% | |
CATACATTTATGATTGTGGG+TGG | - | chr7.2:81636000-81636019 | MS.gene44707:intron | 35.0% | |
CATTGAACTAGGGCAATAAA+AGG | + | chr7.2:81635706-81635725 | None:intergenic | 35.0% | |
CTCAATTATCATAGGACAGA+GGG | - | chr7.2:81637201-81637220 | MS.gene44707:CDS | 35.0% | |
GTAGTGAAAGGAGAAATAAG+AGG | - | chr7.2:81635895-81635914 | MS.gene44707:intron | 35.0% | |
TAAGAGGATGATCAAGAATC+GGG | - | chr7.2:81635911-81635930 | MS.gene44707:intron | 35.0% | |
TCAATCCTACTAGTACTATG+TGG | + | chr7.2:81637506-81637525 | None:intergenic | 35.0% | |
TCGAATCGCTCAATTATCAT+AGG | - | chr7.2:81637193-81637212 | MS.gene44707:CDS | 35.0% | |
TGTCAATGTGAATGCAGTTA+CGG | - | chr7.2:81637551-81637570 | MS.gene44707:CDS | 35.0% | |
TTGTATATTGTGGTGAAAGG+TGG | - | chr7.2:81636367-81636386 | MS.gene44707:intron | 35.0% | |
! | ACTCGTAATTGTACTTTTGG+TGG | - | chr7.2:81635561-81635580 | MS.gene44707:intron | 35.0% |
!! | AATAATCGATGCTTTTGGGT+GGG | + | chr7.2:81635629-81635648 | None:intergenic | 35.0% |
ACACCCACATTCTGATCATA+CGG | + | chr7.2:81635813-81635832 | None:intergenic | 40.0% | |
ACATTCTGATCATACGGTGA+AGG | + | chr7.2:81635807-81635826 | None:intergenic | 40.0% | |
ACTTAGAAGACAGCAACAAG+AGG | - | chr7.2:81636576-81636595 | MS.gene44707:CDS | 40.0% | |
AGAGCAGCAAGTTCAACTAT+TGG | - | chr7.2:81636537-81636556 | MS.gene44707:CDS | 40.0% | |
ATTCGGTTAATTCGAAACGG+AGG | + | chr7.2:81636940-81636959 | None:intergenic | 40.0% | |
ATTCTTAGGGACGGATATAG+AGG | - | chr7.2:81636031-81636050 | MS.gene44707:intron | 40.0% | |
CTGATATTAGCCGTAGTGAA+AGG | - | chr7.2:81635883-81635902 | MS.gene44707:intron | 40.0% | |
CTTGAGTGTGAAAGTCTTGA+AGG | + | chr7.2:81635593-81635612 | None:intergenic | 40.0% | |
GCTCAATTATCATAGGACAG+AGG | - | chr7.2:81637200-81637219 | MS.gene44707:CDS | 40.0% | |
GGAATAGAGATTCTTAGGGA+CGG | - | chr7.2:81636022-81636041 | MS.gene44707:intron | 40.0% | |
GGTGGGAATAGAGATTCTTA+GGG | - | chr7.2:81636018-81636037 | MS.gene44707:intron | 40.0% | |
GTCAATGTGAATGCAGTTAC+GGG | - | chr7.2:81637552-81637571 | MS.gene44707:CDS | 40.0% | |
TCACCGTATGATCAGAATGT+GGG | - | chr7.2:81635807-81635826 | MS.gene44707:CDS | 40.0% | |
TGAAAATCAGTGACAAGAGG+TGG | + | chr7.2:81635735-81635754 | None:intergenic | 40.0% | |
TTCACCGTATGATCAGAATG+TGG | - | chr7.2:81635806-81635825 | MS.gene44707:CDS | 40.0% | |
TTCGGTTAATTCGAAACGGA+GGG | + | chr7.2:81636939-81636958 | None:intergenic | 40.0% | |
TTCTTAGGGACGGATATAGA+GGG | - | chr7.2:81636032-81636051 | MS.gene44707:intron | 40.0% | |
! | GAATAATCGATGCTTTTGGG+TGG | + | chr7.2:81635630-81635649 | None:intergenic | 40.0% |
!! | AAAACAGTATTGGTAGGGGT+GGG | + | chr7.2:81636076-81636095 | None:intergenic | 40.0% |
!! | CAAGTGTTGGTGATTTAGGT+CGG | - | chr7.2:81636844-81636863 | MS.gene44707:intron | 40.0% |
!! | CTCTTGGTGCAGAAATGTTT+TGG | + | chr7.2:81635767-81635786 | None:intergenic | 40.0% |
!! | GTTGCAAGTGTTGGTGATTT+AGG | - | chr7.2:81636840-81636859 | MS.gene44707:intron | 40.0% |
!! | TAAAACAGTATTGGTAGGGG+TGG | + | chr7.2:81636077-81636096 | None:intergenic | 40.0% |
AAATCAGTGACAAGAGGTGG+TGG | + | chr7.2:81635732-81635751 | None:intergenic | 45.0% | |
AATCAGTGACAAGAGGTGGT+GGG | + | chr7.2:81635731-81635750 | None:intergenic | 45.0% | |
GCAGAAAGTTCAGCTATTGC+AGG | - | chr7.2:81637280-81637299 | MS.gene44707:CDS | 45.0% | |
GCAGCAAGTTCAACTATTGG+AGG | - | chr7.2:81636540-81636559 | MS.gene44707:CDS | 45.0% | |
GGGTGGGAATAGAGATTCTT+AGG | - | chr7.2:81636017-81636036 | MS.gene44707:intron | 45.0% | |
TCTTAGGGACGGATATAGAG+GGG | - | chr7.2:81636033-81636052 | MS.gene44707:intron | 45.0% | |
TTTACGCTCGCAGAAACTCT+TGG | + | chr7.2:81635783-81635802 | None:intergenic | 45.0% | |
!! | AAACAGTATTGGTAGGGGTG+GGG | + | chr7.2:81636075-81636094 | None:intergenic | 45.0% |
!! | TTATTTAGAAATATATTAAA+CGG | + | chr7.2:81636314-81636333 | None:intergenic | 5.0% |
ATCAGTGACAAGAGGTGGTG+GGG | + | chr7.2:81635730-81635749 | None:intergenic | 50.0% | |
CTTAGGGACGGATATAGAGG+GGG | - | chr7.2:81636034-81636053 | MS.gene44707:intron | 50.0% | |
GCGTTCACGAGCTAGAAAAC+AGG | - | chr7.2:81635944-81635963 | MS.gene44707:intron | 50.0% | |
! | GTGGTGGGGTCATTGAACTA+GGG | + | chr7.2:81635716-81635735 | None:intergenic | 50.0% |
! | TTACGGGAAGCAGAAAGCGT+TGG | - | chr7.2:81637568-81637587 | MS.gene44707:CDS | 50.0% |
! | TTTGGGTGGGTCTGAAGTGA+GGG | + | chr7.2:81635616-81635635 | None:intergenic | 50.0% |
!! | AACAGTATTGGTAGGGGTGG+GGG | + | chr7.2:81636074-81636093 | None:intergenic | 50.0% |
!! | TTTTGGGTGGGTCTGAAGTG+AGG | + | chr7.2:81635617-81635636 | None:intergenic | 50.0% |
!! | ACAGTATTGGTAGGGGTGGG+GGG | + | chr7.2:81636073-81636092 | None:intergenic | 55.0% |
!! | GGTGGTGGGGTCATTGAACT+AGG | + | chr7.2:81635717-81635736 | None:intergenic | 55.0% |
GACGGATATAGAGGGGGCTC+CGG | - | chr7.2:81636040-81636059 | MS.gene44707:intron | 60.0% | |
TATTGGTAGGGGTGGGGGGC+TGG | + | chr7.2:81636069-81636088 | None:intergenic | 65.0% | |
!!! | AGGGGTGGGGGGCTGGTCGC+CGG | + | chr7.2:81636062-81636081 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 81635528 | 81637606 | 81635528 | ID=MS.gene44707 |
chr7.2 | mRNA | 81635528 | 81637606 | 81635528 | ID=MS.gene44707.t1;Parent=MS.gene44707 |
chr7.2 | exon | 81637154 | 81637606 | 81637154 | ID=MS.gene44707.t1.exon1;Parent=MS.gene44707.t1 |
chr7.2 | CDS | 81637154 | 81637606 | 81637154 | ID=cds.MS.gene44707.t1;Parent=MS.gene44707.t1 |
chr7.2 | exon | 81636537 | 81636614 | 81636537 | ID=MS.gene44707.t1.exon2;Parent=MS.gene44707.t1 |
chr7.2 | CDS | 81636537 | 81636614 | 81636537 | ID=cds.MS.gene44707.t1;Parent=MS.gene44707.t1 |
chr7.2 | exon | 81635797 | 81635874 | 81635797 | ID=MS.gene44707.t1.exon3;Parent=MS.gene44707.t1 |
chr7.2 | CDS | 81635797 | 81635874 | 81635797 | ID=cds.MS.gene44707.t1;Parent=MS.gene44707.t1 |
chr7.2 | exon | 81635528 | 81635566 | 81635528 | ID=MS.gene44707.t1.exon4;Parent=MS.gene44707.t1 |
chr7.2 | CDS | 81635528 | 81635566 | 81635528 | ID=cds.MS.gene44707.t1;Parent=MS.gene44707.t1 |
Gene Sequence |
Protein sequence |