Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44746.t1 | XP_003621577.1 | 92.3 | 349 | 15 | 2 | 1 | 339 | 1 | 347 | 1.60E-155 | 558.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44746.t1 | Q9CAA4 | 41.1 | 287 | 150 | 4 | 49 | 335 | 42 | 309 | 9.5e-40 | 165.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44746.t1 | G7KRZ1 | 92.3 | 349 | 15 | 2 | 1 | 339 | 1 | 347 | 1.2e-155 | 558.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene44746.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44746.t1 | MTR_7g017320 | 91.977 | 349 | 16 | 2 | 1 | 339 | 1 | 347 | 0.0 | 584 |
| MS.gene44746.t1 | MTR_7g017320 | 91.111 | 270 | 12 | 2 | 1 | 260 | 1 | 268 | 2.58e-152 | 429 |
| MS.gene44746.t1 | MTR_5g048350 | 39.157 | 332 | 155 | 6 | 27 | 335 | 25 | 332 | 3.57e-62 | 201 |
| MS.gene44746.t1 | MTR_4g110040 | 39.782 | 367 | 171 | 13 | 1 | 335 | 86 | 434 | 3.58e-55 | 186 |
| MS.gene44746.t1 | MTR_4g110040 | 39.782 | 367 | 171 | 13 | 1 | 335 | 218 | 566 | 7.77e-54 | 186 |
| MS.gene44746.t1 | MTR_5g048350 | 38.554 | 332 | 148 | 9 | 27 | 335 | 25 | 323 | 2.89e-53 | 178 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44746.t1 | AT1G69010 | 41.234 | 308 | 148 | 8 | 3 | 303 | 2 | 283 | 3.53e-57 | 188 |
| MS.gene44746.t1 | AT5G38860 | 38.255 | 298 | 150 | 7 | 47 | 336 | 27 | 298 | 1.72e-52 | 175 |
| MS.gene44746.t1 | AT5G08130 | 38.333 | 300 | 151 | 8 | 1 | 293 | 103 | 375 | 3.25e-43 | 154 |
| MS.gene44746.t1 | AT5G08130 | 38.000 | 300 | 153 | 8 | 1 | 293 | 103 | 376 | 8.22e-43 | 153 |
| MS.gene44746.t1 | AT5G08130 | 38.333 | 300 | 151 | 8 | 1 | 293 | 227 | 499 | 3.76e-42 | 154 |
| MS.gene44746.t1 | AT5G08130 | 38.333 | 300 | 151 | 8 | 1 | 293 | 223 | 495 | 3.83e-42 | 153 |
| MS.gene44746.t1 | AT5G08130 | 38.000 | 300 | 153 | 8 | 1 | 293 | 223 | 496 | 9.05e-42 | 152 |
| MS.gene44746.t1 | AT5G08130 | 38.000 | 300 | 153 | 8 | 1 | 293 | 223 | 496 | 9.05e-42 | 152 |
| MS.gene44746.t1 | AT5G08130 | 38.000 | 300 | 153 | 8 | 1 | 293 | 227 | 500 | 1.00e-41 | 152 |
| MS.gene44746.t1 | AT5G08130 | 38.000 | 300 | 153 | 8 | 1 | 293 | 223 | 496 | 1.02e-41 | 152 |
| MS.gene44746.t1 | AT5G38860 | 63.889 | 108 | 36 | 2 | 47 | 151 | 27 | 134 | 1.14e-39 | 140 |
Find 80 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTCTTCTGAACCTCTT+TGG | 0.254372 | 7.4:+82841868 | None:intergenic |
| TCATGTTTAAACAGAATATT+AGG | 0.257906 | 7.4:-82843197 | MS.gene44746:intron |
| CATTCTCGAGCTATTCAAAA+TGG | 0.263201 | 7.4:-82845203 | MS.gene44746:CDS |
| TGGAGGGGTCAGACATTATT+GGG | 0.290265 | 7.4:+82845126 | None:intergenic |
| CAACCAATTCTTCATCTTGA+TGG | 0.291614 | 7.4:+82847525 | None:intergenic |
| ATCAAGTACCTCCAATAAAA+AGG | 0.295735 | 7.4:+82846510 | None:intergenic |
| GTGGAGGGGTCAGACATTAT+TGG | 0.312044 | 7.4:+82845125 | None:intergenic |
| TGAGTATATTCATTTCTTAC+AGG | 0.317013 | 7.4:-82846378 | MS.gene44746:CDS |
| CAAATTTCCAGCCTCAAGTA+TGG | 0.334461 | 7.4:-82844950 | MS.gene44746:CDS |
| ACCCATGGAATTAATTTAGT+TGG | 0.355118 | 7.4:+82846308 | None:intergenic |
| ACAATATGATTGTCCTTGTT+TGG | 0.394063 | 7.4:+82844918 | None:intergenic |
| AGGCCATCAAGATGAAGAAT+TGG | 0.415929 | 7.4:-82847528 | MS.gene44746:CDS |
| ATTCAAAATGGGTCTGTTGA+TGG | 0.420277 | 7.4:-82845191 | MS.gene44746:CDS |
| TCCTTATGAAGGATGGAATC+AGG | 0.425736 | 7.4:-82846333 | MS.gene44746:CDS |
| TGGAAATTTGAAGCCATGTC+AGG | 0.426999 | 7.4:+82844963 | None:intergenic |
| CCAATCGCATTTGCATGGTC+AGG | 0.430055 | 7.4:+82845054 | None:intergenic |
| ACCTGAAGATTGTAGCGCTT+GGG | 0.439567 | 7.4:+82843166 | None:intergenic |
| GAGGATTTGAAAATTGATAG+TGG | 0.439987 | 7.4:-82844870 | MS.gene44746:CDS |
| GTTGGTAGACGAACAAATAC+TGG | 0.440350 | 7.4:-82843104 | MS.gene44746:CDS |
| ATTCAGAAAGGTTGCATCCC+TGG | 0.447634 | 7.4:-82845098 | MS.gene44746:CDS |
| AGCCAACTAAATTAATTCCA+TGG | 0.454176 | 7.4:-82846310 | MS.gene44746:CDS |
| ACCATACCACCGCTAACAAC+CGG | 0.455738 | 7.4:+82845020 | None:intergenic |
| TCCTGATTCCATCCTTCATA+AGG | 0.456798 | 7.4:+82846332 | None:intergenic |
| AACCTTTGAGCTATATTGAC+AGG | 0.466561 | 7.4:+82843073 | None:intergenic |
| CACCTGAAGATTGTAGCGCT+TGG | 0.468612 | 7.4:+82843165 | None:intergenic |
| ACCCAAGCGCTACAATCTTC+AGG | 0.469010 | 7.4:-82843167 | MS.gene44746:CDS |
| TTGAGAGAGGAAGATGTGTT+TGG | 0.473751 | 7.4:+82847473 | None:intergenic |
| ATTTATGAACATCCTTATGA+AGG | 0.475064 | 7.4:-82846344 | MS.gene44746:CDS |
| TGCTAAGCCATACTTGAGGC+TGG | 0.494117 | 7.4:+82844943 | None:intergenic |
| TGAACCCATCAGAGGGAAAA+GGG | 0.494552 | 7.4:-82847255 | MS.gene44746:CDS |
| ATCAATTTCCACCGAGACAT+TGG | 0.500672 | 7.4:+82843127 | None:intergenic |
| ATGAACCCATCAGAGGGAAA+AGG | 0.501254 | 7.4:-82847256 | MS.gene44746:CDS |
| ACTACTTCTGTGGATGAACC+AGG | 0.503685 | 7.4:+82845080 | None:intergenic |
| ATTCTCGAGCTATTCAAAAT+GGG | 0.508087 | 7.4:-82845202 | MS.gene44746:CDS |
| GCCATGTCAGGATTAGATAC+AGG | 0.508965 | 7.4:+82844975 | None:intergenic |
| AATCAAGCAATGGCATGTTC+AGG | 0.511565 | 7.4:-82841925 | MS.gene44746:CDS |
| CCTGACCATGCAAATGCGAT+TGG | 0.517967 | 7.4:-82845054 | MS.gene44746:CDS |
| ATGAACATCCTTATGAAGGA+TGG | 0.522411 | 7.4:-82846340 | MS.gene44746:CDS |
| GCGATTGGACATGTTTGATC+CGG | 0.526444 | 7.4:-82845039 | MS.gene44746:CDS |
| TTTCCACCGAGACATTGGTC+TGG | 0.526791 | 7.4:+82843132 | None:intergenic |
| GCCAACTAAATTAATTCCAT+GGG | 0.528721 | 7.4:-82846309 | MS.gene44746:intron |
| TCCGGTTGTTAGCGGTGGTA+TGG | 0.531955 | 7.4:-82845021 | MS.gene44746:CDS |
| CAATCGCATTTGCATGGTCA+GGG | 0.532625 | 7.4:+82845055 | None:intergenic |
| ATGTTTGATCCGGTTGTTAG+CGG | 0.533535 | 7.4:-82845029 | MS.gene44746:CDS |
| CTGAATGCTTAGAACGATGA+GGG | 0.533904 | 7.4:+82847228 | None:intergenic |
| TTGTGACTTGGCAGTGAAGG+TGG | 0.545492 | 7.4:-82847279 | MS.gene44746:intron |
| GCAACCTTTCTGAATAGTTG+TGG | 0.548890 | 7.4:+82845106 | None:intergenic |
| TTCCACCGAGACATTGGTCT+GGG | 0.553185 | 7.4:+82843133 | None:intergenic |
| TCTCAAGTGCCTACTCTCAA+AGG | 0.555019 | 7.4:-82844830 | MS.gene44746:intron |
| ATTATTGTTGTTGTTGAGAG+AGG | 0.566468 | 7.4:+82847460 | None:intergenic |
| ACCTTTCTGAATAGTTGTGG+AGG | 0.568104 | 7.4:+82845109 | None:intergenic |
| AAAATGGCTAGGTCTGCTAA+AGG | 0.571124 | 7.4:-82847548 | MS.gene44746:CDS |
| CCTTTCTGAATAGTTGTGGA+GGG | 0.573907 | 7.4:+82845110 | None:intergenic |
| CATGTCCAATCGCATTTGCA+TGG | 0.574061 | 7.4:+82845049 | None:intergenic |
| TATGGTGACTCAACAGATGC+TGG | 0.576277 | 7.4:-82845003 | MS.gene44746:CDS |
| TTTGATCCGGTTGTTAGCGG+TGG | 0.584063 | 7.4:-82845026 | MS.gene44746:CDS |
| TGAAGAAAAGGAAAATGGCT+AGG | 0.598883 | 7.4:-82847559 | None:intergenic |
| CCCTCCACAACTATTCAGAA+AGG | 0.598886 | 7.4:-82845110 | MS.gene44746:CDS |
| ACCTTTGAGCTATATTGACA+GGG | 0.600389 | 7.4:+82843074 | None:intergenic |
| GAAGAAGTAAAATTAATGAG+AGG | 0.600769 | 7.4:-82847190 | MS.gene44746:intron |
| CCCCTGTCAATATAGCTCAA+AGG | 0.601053 | 7.4:-82843075 | MS.gene44746:intron |
| CTTTCTGAATAGTTGTGGAG+GGG | 0.603614 | 7.4:+82845111 | None:intergenic |
| AGGTGGATGAACCCATCAGA+GGG | 0.603757 | 7.4:-82847262 | MS.gene44746:CDS |
| TCTGAATGCTTAGAACGATG+AGG | 0.614104 | 7.4:+82847227 | None:intergenic |
| ATGGCTTAGCAAACCAAACA+AGG | 0.619238 | 7.4:-82844931 | MS.gene44746:CDS |
| GCCTGTATCTAATCCTGACA+TGG | 0.619504 | 7.4:-82844976 | MS.gene44746:CDS |
| AACAACAACAATAATAACAA+TGG | 0.621353 | 7.4:-82847452 | MS.gene44746:intron |
| GTCTCGGTGGAAATTGATGT+TGG | 0.623639 | 7.4:-82843122 | MS.gene44746:CDS |
| TTTGTCCCAGACCAATGTCT+CGG | 0.633388 | 7.4:-82843138 | MS.gene44746:CDS |
| GGTCAGGGGAACTACTTCTG+TGG | 0.634643 | 7.4:+82845070 | None:intergenic |
| ATTTGTCAGCAATCAAGCAA+TGG | 0.639145 | 7.4:-82841935 | MS.gene44746:CDS |
| GGTTTGCTAAGCCATACTTG+AGG | 0.640701 | 7.4:+82844939 | None:intergenic |
| AAGGTGGATGAACCCATCAG+AGG | 0.649580 | 7.4:-82847263 | MS.gene44746:CDS |
| AATCGCATTTGCATGGTCAG+GGG | 0.653290 | 7.4:+82845056 | None:intergenic |
| CTTTGAGCTATATTGACAGG+GGG | 0.658543 | 7.4:+82843076 | None:intergenic |
| AGGAATGAATTACTTCAGTG+AGG | 0.664514 | 7.4:-82841905 | MS.gene44746:CDS |
| ATTCTGAACAAAGTCCAAAG+AGG | 0.673768 | 7.4:-82841882 | MS.gene44746:CDS |
| CCTTTGAGCTATATTGACAG+GGG | 0.682925 | 7.4:+82843075 | None:intergenic |
| CTACTTCTGTGGATGAACCA+GGG | 0.695417 | 7.4:+82845081 | None:intergenic |
| GTCCCAGACCAATGTCTCGG+TGG | 0.716299 | 7.4:-82843135 | MS.gene44746:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCTTGTAAATTAAATT+GGG | - | chr7.4:82842958-82842977 | MS.gene44746:intron | 10.0% |
| !! | CAACAAAAAAAAAAAAAAAT+TGG | + | chr7.4:82847434-82847453 | None:intergenic | 10.0% |
| !! | TAAATTCTTGTAAATTAAAT+TGG | - | chr7.4:82842957-82842976 | MS.gene44746:intron | 10.0% |
| !! | TATAGATACTAAAAAATTAA+AGG | + | chr7.4:82845604-82845623 | None:intergenic | 10.0% |
| !! | TTAATAGTTAATAATTAAAG+AGG | + | chr7.4:82845565-82845584 | None:intergenic | 10.0% |
| !!! | TTAACTGTTTTATTTTTTAA+GGG | - | chr7.4:82845143-82845162 | MS.gene44746:intron | 10.0% |
| !!! | TTTAACTGTTTTATTTTTTA+AGG | - | chr7.4:82845142-82845161 | MS.gene44746:intron | 10.0% |
| !! | AAAACAATGTTGTTAAATAA+CGG | - | chr7.4:82843571-82843590 | MS.gene44746:intron | 15.0% |
| !! | AATAAAACAGTTAAAACTAT+TGG | + | chr7.4:82845137-82845156 | None:intergenic | 15.0% |
| !! | ATAAAACAGTTAAAACTATT+GGG | + | chr7.4:82845136-82845155 | None:intergenic | 15.0% |
| !! | TAGTAATTTAAGTGTATATT+TGG | + | chr7.4:82842732-82842751 | None:intergenic | 15.0% |
| !! | TTCATTGAAAATAAAATTTG+AGG | + | chr7.4:82846787-82846806 | None:intergenic | 15.0% |
| !!! | CATATAATTTTCAAAATAAG+TGG | - | chr7.4:82846089-82846108 | MS.gene44746:intron | 15.0% |
| !!! | TTTATTTTTTAAGGGTATAT+AGG | - | chr7.4:82845151-82845170 | MS.gene44746:intron | 15.0% |
| !! | AACAACAACAATAATAACAA+TGG | - | chr7.4:82841954-82841973 | MS.gene44746:intron | 20.0% |
| !! | AAGGTAAAGTTATTTATGTT+CGG | - | chr7.4:82842538-82842557 | MS.gene44746:intron | 20.0% |
| !! | AATCATATAAGTACTTATGT+AGG | - | chr7.4:82846615-82846634 | MS.gene44746:intron | 20.0% |
| !! | ACTTATATGATTATATCATG+TGG | + | chr7.4:82846607-82846626 | None:intergenic | 20.0% |
| !! | CTTAAATTAACCTTTATTCT+TGG | + | chr7.4:82845469-82845488 | None:intergenic | 20.0% |
| !! | TACACATATGTAAGATTATA+TGG | - | chr7.4:82843368-82843387 | MS.gene44746:intron | 20.0% |
| !! | TATAATCTTACATATGTGTA+TGG | + | chr7.4:82843368-82843387 | None:intergenic | 20.0% |
| !! | TCATGTTTAAACAGAATATT+AGG | - | chr7.4:82846209-82846228 | MS.gene44746:intron | 20.0% |
| !! | TTCAATAAGCTATTTGTATT+TGG | + | chr7.4:82846851-82846870 | None:intergenic | 20.0% |
| !!! | ATGGGTCATATAATTTTTTT+TGG | + | chr7.4:82845906-82845925 | None:intergenic | 20.0% |
| !!! | TAAACTTCTAGAATCAATTT+TGG | - | chr7.4:82842689-82842708 | MS.gene44746:intron | 20.0% |
| !!! | TCATTTTCTTAGTATATGTT+TGG | - | chr7.4:82842445-82842464 | MS.gene44746:intron | 20.0% |
| !!! | TTCTTTTATGTTTATTTGAG+AGG | - | chr7.4:82846405-82846424 | MS.gene44746:intron | 20.0% |
| !!! | TTGGTATAAGATGATTTTTA+AGG | + | chr7.4:82847415-82847434 | None:intergenic | 20.0% |
| ! | AAAGAATGAATAAACTTTGC+AGG | + | chr7.4:82846391-82846410 | None:intergenic | 25.0% |
| ! | AAATTAACCTTTATTCTTGG+AGG | + | chr7.4:82845466-82845485 | None:intergenic | 25.0% |
| ! | AACTTATTCAAGATAGCATA+TGG | - | chr7.4:82846709-82846728 | MS.gene44746:intron | 25.0% |
| ! | AAGAATGAATAAACTTTGCA+GGG | + | chr7.4:82846390-82846409 | None:intergenic | 25.0% |
| ! | AAGTTATTCGATCATAATGT+TGG | - | chr7.4:82844784-82844803 | MS.gene44746:intron | 25.0% |
| ! | ACATACACAATCAAGTATAT+TGG | + | chr7.4:82843963-82843982 | None:intergenic | 25.0% |
| ! | ATCTGCAATTAGGATTTAAT+GGG | - | chr7.4:82845094-82845113 | MS.gene44746:CDS | 25.0% |
| ! | ATTCACAATTCCTTGATTAA+TGG | - | chr7.4:82842026-82842045 | MS.gene44746:intron | 25.0% |
| ! | ATTGACAAGAAAATGTTCAA+GGG | - | chr7.4:82846000-82846019 | MS.gene44746:intron | 25.0% |
| ! | ATTGCAGAACACAATTAAAA+TGG | + | chr7.4:82842076-82842095 | None:intergenic | 25.0% |
| ! | ATTTATGAACATCCTTATGA+AGG | - | chr7.4:82843062-82843081 | MS.gene44746:intron | 25.0% |
| ! | CAAATATAAGGCTTATACAT+TGG | + | chr7.4:82846514-82846533 | None:intergenic | 25.0% |
| ! | CATTCAAGAATTTAATTCTG+TGG | - | chr7.4:82844016-82844035 | MS.gene44746:intron | 25.0% |
| ! | GAAGAAGTAAAATTAATGAG+AGG | - | chr7.4:82842216-82842235 | MS.gene44746:intron | 25.0% |
| ! | TAATACATTGAGAGAAAAAG+AGG | - | chr7.4:82844517-82844536 | MS.gene44746:intron | 25.0% |
| ! | TATTACTTAAAGCTGATAGA+AGG | - | chr7.4:82845759-82845778 | MS.gene44746:intron | 25.0% |
| ! | TATTGACAAGAAAATGTTCA+AGG | - | chr7.4:82845999-82846018 | MS.gene44746:intron | 25.0% |
| ! | TGAGTATATTCATTTCTTAC+AGG | - | chr7.4:82843028-82843047 | MS.gene44746:intron | 25.0% |
| ! | TTCACAATTCCTTGATTAAT+GGG | - | chr7.4:82842027-82842046 | MS.gene44746:intron | 25.0% |
| ! | TTGATCAGTTATATTGTTGT+TGG | - | chr7.4:82847141-82847160 | MS.gene44746:intron | 25.0% |
| ! | TTTCCCATATATTCATAGAA+CGG | + | chr7.4:82843520-82843539 | None:intergenic | 25.0% |
| !! | AAAATAAAATTTGAGGCAGA+TGG | + | chr7.4:82846780-82846799 | None:intergenic | 25.0% |
| !! | ACAAGATCAAATTTTAGATC+AGG | + | chr7.4:82843760-82843779 | None:intergenic | 25.0% |
| !! | AGAATGATCTGTAGTATTTT+CGG | + | chr7.4:82844189-82844208 | None:intergenic | 25.0% |
| !! | AGATAAAGCTTCCTTTTTAT+TGG | - | chr7.4:82842885-82842904 | MS.gene44746:intron | 25.0% |
| !! | AGATAATGGTGACATATTTA+GGG | + | chr7.4:82847040-82847059 | None:intergenic | 25.0% |
| !! | ATAATTGATTCTGACATGTT+TGG | + | chr7.4:82842670-82842689 | None:intergenic | 25.0% |
| !! | ATATTTGGTTTCACATAAAG+AGG | + | chr7.4:82842717-82842736 | None:intergenic | 25.0% |
| !! | CAATGTATAAGCCTTATATT+TGG | - | chr7.4:82846512-82846531 | MS.gene44746:intron | 25.0% |
| !! | CTTAAGATTTTACCATCTTA+TGG | - | chr7.4:82844041-82844060 | MS.gene44746:intron | 25.0% |
| !! | TAAGTACTTATGTAGGTTTT+TGG | - | chr7.4:82846622-82846641 | MS.gene44746:intron | 25.0% |
| !! | TACAATAAGCTATCTGTTTT+TGG | + | chr7.4:82846950-82846969 | None:intergenic | 25.0% |
| !! | TATTTGGTTTCACATAAAGA+GGG | + | chr7.4:82842716-82842735 | None:intergenic | 25.0% |
| !! | TCAAGTAGAATCAATTTTTG+AGG | - | chr7.4:82842619-82842638 | MS.gene44746:intron | 25.0% |
| !! | TCTCTTTTTGAATCATTTTC+AGG | + | chr7.4:82842868-82842887 | None:intergenic | 25.0% |
| !! | TGATTGTGTAAAATTGATTC+TGG | - | chr7.4:82842501-82842520 | MS.gene44746:intron | 25.0% |
| !!! | ATATTTTTGTGACAGATTTC+AGG | - | chr7.4:82842825-82842844 | MS.gene44746:intron | 25.0% |
| !!! | TAACAACATTGTTTTAGATG+AGG | + | chr7.4:82843566-82843585 | None:intergenic | 25.0% |
| !!! | TGTACATTTTTAGGCAATTA+TGG | + | chr7.4:82844257-82844276 | None:intergenic | 25.0% |
| !!! | TTTTTTCAGAGAAATCATCA+CGG | - | chr7.4:82844158-82844177 | MS.gene44746:intron | 25.0% |
| AAAAAACAGAGAAGGAATAG+TGG | + | chr7.4:82845375-82845394 | None:intergenic | 30.0% | |
| AAACGAGTAATTCACTTTAC+AGG | + | chr7.4:82843338-82843357 | None:intergenic | 30.0% | |
| AACGAGTAATTCACTTTACA+GGG | + | chr7.4:82843337-82843356 | None:intergenic | 30.0% | |
| AACGGTACAAATATATAACC+AGG | + | chr7.4:82843502-82843521 | None:intergenic | 30.0% | |
| AAGGAATTGTGAATCATTGT+TGG | + | chr7.4:82842020-82842039 | None:intergenic | 30.0% | |
| AAGTTCTTCACTTACGTAAA+AGG | + | chr7.4:82843394-82843413 | None:intergenic | 30.0% | |
| ACAATATGATTGTCCTTGTT+TGG | + | chr7.4:82844491-82844510 | None:intergenic | 30.0% | |
| ACATTGAGTAGAACAGATAA+TGG | + | chr7.4:82847054-82847073 | None:intergenic | 30.0% | |
| ACCCATGGAATTAATTTAGT+TGG | + | chr7.4:82843101-82843120 | None:intergenic | 30.0% | |
| ACGCAATAATGATGTGATAA+AGG | + | chr7.4:82845057-82845076 | None:intergenic | 30.0% | |
| ACGGTACAAATATATAACCA+GGG | + | chr7.4:82843501-82843520 | None:intergenic | 30.0% | |
| AGCCAACTAAATTAATTCCA+TGG | - | chr7.4:82843096-82843115 | MS.gene44746:CDS | 30.0% | |
| AGGAATTGTGAATCATTGTT+GGG | + | chr7.4:82842019-82842038 | None:intergenic | 30.0% | |
| AGGAGAAAAGAAACAATACA+AGG | + | chr7.4:82847395-82847414 | None:intergenic | 30.0% | |
| ATCAAGTACCTCCAATAAAA+AGG | + | chr7.4:82842899-82842918 | None:intergenic | 30.0% | |
| ATCGACAAATCATATGAATG+TGG | + | chr7.4:82845820-82845839 | None:intergenic | 30.0% | |
| ATGTTGTTAATCTCAAACAG+TGG | + | chr7.4:82845710-82845729 | None:intergenic | 30.0% | |
| ATTCCAAATAACTTTACCCA+TGG | + | chr7.4:82843116-82843135 | None:intergenic | 30.0% | |
| ATTCCATGGGTAAAGTTATT+TGG | - | chr7.4:82843110-82843129 | MS.gene44746:CDS | 30.0% | |
| ATTCGATCATAATGTTGGAT+TGG | - | chr7.4:82844789-82844808 | MS.gene44746:intron | 30.0% | |
| ATTCTCGAGCTATTCAAAAT+GGG | - | chr7.4:82844204-82844223 | MS.gene44746:intron | 30.0% | |
| CAAATCATATGAATGTGGAA+TGG | + | chr7.4:82845815-82845834 | None:intergenic | 30.0% | |
| CACACACATAATATCATTCA+TGG | + | chr7.4:82843239-82843258 | None:intergenic | 30.0% | |
| CACATAGTTAACATGAAATC+AGG | + | chr7.4:82844638-82844657 | None:intergenic | 30.0% | |
| CATCTGCAATTAGGATTTAA+TGG | - | chr7.4:82845093-82845112 | MS.gene44746:CDS | 30.0% | |
| CCCATATACTAATCAATCAA+CGG | + | chr7.4:82843296-82843315 | None:intergenic | 30.0% | |
| GAATGCATTAAAAAGGATGT+AGG | - | chr7.4:82846476-82846495 | MS.gene44746:intron | 30.0% | |
| GAGGATTTGAAAATTGATAG+TGG | - | chr7.4:82844536-82844555 | MS.gene44746:intron | 30.0% | |
| GCCAACTAAATTAATTCCAT+GGG | - | chr7.4:82843097-82843116 | MS.gene44746:CDS | 30.0% | |
| GTACCGTTCTATGAATATAT+GGG | - | chr7.4:82843514-82843533 | MS.gene44746:intron | 30.0% | |
| GTTACCAGAATGCATTAAAA+AGG | - | chr7.4:82846469-82846488 | MS.gene44746:intron | 30.0% | |
| TAAAACTATTGGGTATTCGA+GGG | + | chr7.4:82845126-82845145 | None:intergenic | 30.0% | |
| TCAACCAATTTAACTGGAAA+CGG | - | chr7.4:82847101-82847120 | MS.gene44746:intron | 30.0% | |
| TGAATACATGAAGCAAATGA+TGG | + | chr7.4:82842923-82842942 | None:intergenic | 30.0% | |
| TGAATATATGGGAAACTGTT+CGG | - | chr7.4:82843525-82843544 | MS.gene44746:intron | 30.0% | |
| TGCACATAAGACAAAAACAA+AGG | + | chr7.4:82843002-82843021 | None:intergenic | 30.0% | |
| TGTACCGTTCTATGAATATA+TGG | - | chr7.4:82843513-82843532 | MS.gene44746:intron | 30.0% | |
| TGTCAATATATGATGTTGAC+TGG | - | chr7.4:82846184-82846203 | MS.gene44746:intron | 30.0% | |
| TTAAAACTATTGGGTATTCG+AGG | + | chr7.4:82845127-82845146 | None:intergenic | 30.0% | |
| TTCTACTTGAAGCTAGAAAT+TGG | + | chr7.4:82842609-82842628 | None:intergenic | 30.0% | |
| TTGTTAAATAACGGCTATAG+TGG | - | chr7.4:82843580-82843599 | MS.gene44746:intron | 30.0% | |
| TTTGCATTCAAATCAGGAAT+AGG | + | chr7.4:82843874-82843893 | None:intergenic | 30.0% | |
| ! | ACATCCTTTTTAATGCATTC+TGG | + | chr7.4:82846476-82846495 | None:intergenic | 30.0% |
| ! | ACCGTTGATTGATTAGTATA+TGG | - | chr7.4:82843292-82843311 | MS.gene44746:intron | 30.0% |
| ! | ATATTGTTGTTGGATTGAAC+CGG | - | chr7.4:82847151-82847170 | MS.gene44746:intron | 30.0% |
| ! | ATTATTGTTGTTGTTGAGAG+AGG | + | chr7.4:82841949-82841968 | None:intergenic | 30.0% |
| ! | ATTGGGTTCTGTACATTTTT+AGG | + | chr7.4:82844266-82844285 | None:intergenic | 30.0% |
| ! | ATTTGGTTTCACATAAAGAG+GGG | + | chr7.4:82842715-82842734 | None:intergenic | 30.0% |
| ! | CAGATAATGGTGACATATTT+AGG | + | chr7.4:82847041-82847060 | None:intergenic | 30.0% |
| ! | CCGTTGATTGATTAGTATAT+GGG | - | chr7.4:82843293-82843312 | MS.gene44746:intron | 30.0% |
| ! | CTCTAATAATTTTGTCGGAT+GGG | + | chr7.4:82845924-82845943 | None:intergenic | 30.0% |
| ! | GATAATGGTGACATATTTAG+GGG | + | chr7.4:82847039-82847058 | None:intergenic | 30.0% |
| ! | GTTTCTTTTGCATTCAAATC+AGG | + | chr7.4:82843880-82843899 | None:intergenic | 30.0% |
| ! | TAAAGCTTCCTTTTTATTGG+AGG | - | chr7.4:82842888-82842907 | MS.gene44746:intron | 30.0% |
| ! | TTTGAAACACCCATTAATCA+AGG | + | chr7.4:82842039-82842058 | None:intergenic | 30.0% |
| ! | TTTTACCATCTTATGGCATT+TGG | - | chr7.4:82844048-82844067 | MS.gene44746:intron | 30.0% |
| !! | GGTTTTGTGTTGACAAAAAT+TGG | - | chr7.4:82842466-82842485 | MS.gene44746:intron | 30.0% |
| !! | TTTTAAAAACTGAGCTGAAC+CGG | - | chr7.4:82847073-82847092 | MS.gene44746:intron | 30.0% |
| !!! | ACTATTCCTTCTCTGTTTTT+TGG | - | chr7.4:82845374-82845393 | MS.gene44746:intron | 30.0% |
| !!! | CGTCATTTTTCTTCATTCTA+TGG | - | chr7.4:82846364-82846383 | MS.gene44746:CDS | 30.0% |
| !!! | TTTGTTTTTGTCTTATGTGC+AGG | - | chr7.4:82843001-82843020 | MS.gene44746:intron | 30.0% |
| AAACAACAGTGTACAAACAC+AGG | + | chr7.4:82845632-82845651 | None:intergenic | 35.0% | |
| AAACTCAAAGATCAGAGCAA+AGG | + | chr7.4:82845403-82845422 | None:intergenic | 35.0% | |
| AAAGGTTAATTTAAGCCGAC+TGG | - | chr7.4:82845474-82845493 | MS.gene44746:intron | 35.0% | |
| AACAACAGTGTACAAACACA+GGG | + | chr7.4:82845631-82845650 | None:intergenic | 35.0% | |
| AACCTTTGAGCTATATTGAC+AGG | + | chr7.4:82846336-82846355 | None:intergenic | 35.0% | |
| ACCTTTGAGCTATATTGACA+GGG | + | chr7.4:82846335-82846354 | None:intergenic | 35.0% | |
| AGCCTTGATCCTAAAATTCA+GGG | - | chr7.4:82843459-82843478 | MS.gene44746:intron | 35.0% | |
| AGGAATGAATTACTTCAGTG+AGG | - | chr7.4:82847501-82847520 | MS.gene44746:CDS | 35.0% | |
| ATACTTCTATGGTCATGCAT+TGG | + | chr7.4:82843169-82843188 | None:intergenic | 35.0% | |
| ATGAACATCCTTATGAAGGA+TGG | - | chr7.4:82843066-82843085 | MS.gene44746:intron | 35.0% | |
| ATTCAAAATGGGTCTGTTGA+TGG | - | chr7.4:82844215-82844234 | MS.gene44746:intron | 35.0% | |
| ATTCTGAACAAAGTCCAAAG+AGG | - | chr7.4:82847524-82847543 | MS.gene44746:CDS | 35.0% | |
| ATTTGTCAGCAATCAAGCAA+TGG | - | chr7.4:82847471-82847490 | MS.gene44746:CDS | 35.0% | |
| CAACCAATTCTTCATCTTGA+TGG | + | chr7.4:82841884-82841903 | None:intergenic | 35.0% | |
| CAACCAATTTAACTGGAAAC+GGG | - | chr7.4:82847102-82847121 | MS.gene44746:intron | 35.0% | |
| CAAGTCTGTATCCTTAGAAA+CGG | + | chr7.4:82847366-82847385 | None:intergenic | 35.0% | |
| CATTCTCGAGCTATTCAAAA+TGG | - | chr7.4:82844203-82844222 | MS.gene44746:intron | 35.0% | |
| CGGTACAAATATATAACCAG+GGG | + | chr7.4:82843500-82843519 | None:intergenic | 35.0% | |
| GCTATAGCATTGTAACATTG+TGG | - | chr7.4:82844882-82844901 | MS.gene44746:CDS | 35.0% | |
| GTGTGGAAGAATTAATATCC+TGG | + | chr7.4:82846131-82846150 | None:intergenic | 35.0% | |
| TAACCTTTATTCTTGGAGGT+TGG | + | chr7.4:82845462-82845481 | None:intergenic | 35.0% | |
| TAGGAATAAGAGTTAGAGGT+TGG | + | chr7.4:82843907-82843926 | None:intergenic | 35.0% | |
| TATTTGGACAGAGTCAGTTT+AGG | - | chr7.4:82846528-82846547 | MS.gene44746:CDS | 35.0% | |
| TCAACTGCAATAAGACATTC+TGG | + | chr7.4:82846032-82846051 | None:intergenic | 35.0% | |
| TCCAGTTAAATTGGTTGAAC+TGG | + | chr7.4:82847099-82847118 | None:intergenic | 35.0% | |
| TGATCAAAGCAACTGTGAAA+TGG | + | chr7.4:82847128-82847147 | None:intergenic | 35.0% | |
| TTACAATCGTGCACAAGATT+CGG | - | chr7.4:82845955-82845974 | MS.gene44746:intron | 35.0% | |
| TTAGTTGCAATGTAAAGCCT+TGG | - | chr7.4:82844087-82844106 | MS.gene44746:intron | 35.0% | |
| TTGGGAATGGAATTCTTTGA+AGG | - | chr7.4:82845515-82845534 | MS.gene44746:intron | 35.0% | |
| TTGGTAGGAATAAGAGTTAG+AGG | + | chr7.4:82843911-82843930 | None:intergenic | 35.0% | |
| ! | AAAAACTGACCTTTGAGAGT+AGG | + | chr7.4:82844588-82844607 | None:intergenic | 35.0% |
| ! | AAAATTATTAGAGCGCCACT+TGG | - | chr7.4:82845931-82845950 | MS.gene44746:intron | 35.0% |
| ! | ACCATAGAAGTATGCATTTG+TGG | - | chr7.4:82843176-82843195 | MS.gene44746:CDS | 35.0% |
| ! | ACTGACTCTGTCCAAATATA+AGG | + | chr7.4:82846526-82846545 | None:intergenic | 35.0% |
| ! | CCATAGAAGTATGCATTTGT+GGG | - | chr7.4:82843177-82843196 | MS.gene44746:CDS | 35.0% |
| ! | GCAATTTTTGTGTTGTGACT+TGG | - | chr7.4:82842115-82842134 | MS.gene44746:intron | 35.0% |
| ! | GCTCTAATAATTTTGTCGGA+TGG | + | chr7.4:82845925-82845944 | None:intergenic | 35.0% |
| ! | TATTGTTGTTGGATTGAACC+GGG | - | chr7.4:82847152-82847171 | MS.gene44746:intron | 35.0% |
| ! | TCTGGTTAAAAGTGAGTTGA+AGG | - | chr7.4:82842519-82842538 | MS.gene44746:intron | 35.0% |
| ! | TGATCTGTAGTATTTTCGGA+AGG | + | chr7.4:82844185-82844204 | None:intergenic | 35.0% |
| ! | TGGCGCTCTAATAATTTTGT+CGG | + | chr7.4:82845929-82845948 | None:intergenic | 35.0% |
| ! | TTGTTTAGTCTTCGCAATAG+CGG | - | chr7.4:82845646-82845665 | MS.gene44746:intron | 35.0% |
| ! | TTTTAGATCAGGTTTGTCGA+TGG | + | chr7.4:82843749-82843768 | None:intergenic | 35.0% |
| !!! | ATCCCTGAATTTTAGGATCA+AGG | + | chr7.4:82843464-82843483 | None:intergenic | 35.0% |
| AAACCCCGAAACTGATATAG+CGG | + | chr7.4:82845676-82845695 | None:intergenic | 40.0% | |
| AACTCTTATTCCTACCAAGC+AGG | - | chr7.4:82843913-82843932 | MS.gene44746:intron | 40.0% | |
| AAGCCTTGGAATAATAGCAC+TGG | - | chr7.4:82844101-82844120 | MS.gene44746:intron | 40.0% | |
| AATCAAGCAATGGCATGTTC+AGG | - | chr7.4:82847481-82847500 | MS.gene44746:CDS | 40.0% | |
| ACACCAACCTCCAAGAATAA+AGG | - | chr7.4:82845456-82845475 | MS.gene44746:intron | 40.0% | |
| ACCTTTCTGAATAGTTGTGG+AGG | + | chr7.4:82844300-82844319 | None:intergenic | 40.0% | |
| ACTCTTATTCCTACCAAGCA+GGG | - | chr7.4:82843914-82843933 | MS.gene44746:intron | 40.0% | |
| ACTTGCCAAATGCCATAAGA+TGG | + | chr7.4:82844056-82844075 | None:intergenic | 40.0% | |
| AGGAAGCCAAAAAACAGAGA+AGG | + | chr7.4:82845383-82845402 | None:intergenic | 40.0% | |
| AGGCCATCAAGATGAAGAAT+TGG | - | chr7.4:82841878-82841897 | MS.gene44746:CDS | 40.0% | |
| ATCAATTTCCACCGAGACAT+TGG | + | chr7.4:82846282-82846301 | None:intergenic | 40.0% | |
| ATGGCTTAGCAAACCAAACA+AGG | - | chr7.4:82844475-82844494 | MS.gene44746:intron | 40.0% | |
| ATGTTTGATCCGGTTGTTAG+CGG | - | chr7.4:82844377-82844396 | MS.gene44746:intron | 40.0% | |
| CAAATTTCCAGCCTCAAGTA+TGG | - | chr7.4:82844456-82844475 | MS.gene44746:intron | 40.0% | |
| CAAGACTCAAGCGAGTAAAA+TGG | + | chr7.4:82845845-82845864 | None:intergenic | 40.0% | |
| CAGAAGAATGAGAATGGGTA+TGG | + | chr7.4:82845283-82845302 | None:intergenic | 40.0% | |
| CCCACAAATGCATACTTCTA+TGG | + | chr7.4:82843180-82843199 | None:intergenic | 40.0% | |
| CCTTTCTGAATAGTTGTGGA+GGG | + | chr7.4:82844299-82844318 | None:intergenic | 40.0% | |
| CCTTTGAGCTATATTGACAG+GGG | + | chr7.4:82846334-82846353 | None:intergenic | 40.0% | |
| CGACATGTTAGTGTTGTGTT+CGG | - | chr7.4:82842759-82842778 | MS.gene44746:intron | 40.0% | |
| CGATCTTTAGTCCGTTTCTA+AGG | - | chr7.4:82847352-82847371 | MS.gene44746:intron | 40.0% | |
| CGTGGTTAAACCAATTGAAC+CGG | - | chr7.4:82847299-82847318 | MS.gene44746:intron | 40.0% | |
| CTATCCGCTATATCAGTTTC+GGG | - | chr7.4:82845669-82845688 | MS.gene44746:intron | 40.0% | |
| CTGAATGCTTAGAACGATGA+GGG | + | chr7.4:82842181-82842200 | None:intergenic | 40.0% | |
| CTTTCTGAATAGTTGTGGAG+GGG | + | chr7.4:82844298-82844317 | None:intergenic | 40.0% | |
| CTTTGAGCTATATTGACAGG+GGG | + | chr7.4:82846333-82846352 | None:intergenic | 40.0% | |
| GAGCCTTGATCCTAAAATTC+AGG | - | chr7.4:82843458-82843477 | MS.gene44746:intron | 40.0% | |
| GCAACCTTTCTGAATAGTTG+TGG | + | chr7.4:82844303-82844322 | None:intergenic | 40.0% | |
| GCACTATTGTAACTGCTAAC+TGG | + | chr7.4:82843673-82843692 | None:intergenic | 40.0% | |
| GCATGCAGAAGAATGAGAAT+GGG | + | chr7.4:82845288-82845307 | None:intergenic | 40.0% | |
| GCCAGTTCAACCAATTTAAC+TGG | - | chr7.4:82847095-82847114 | MS.gene44746:intron | 40.0% | |
| GCTATAGCATTGTAGCGTAT+TGG | - | chr7.4:82843691-82843710 | MS.gene44746:intron | 40.0% | |
| GCTATCCGCTATATCAGTTT+CGG | - | chr7.4:82845668-82845687 | MS.gene44746:intron | 40.0% | |
| GTTAAATTGGTTGAACTGGC+CGG | + | chr7.4:82847095-82847114 | None:intergenic | 40.0% | |
| TATCCGCTATATCAGTTTCG+GGG | - | chr7.4:82845670-82845689 | MS.gene44746:intron | 40.0% | |
| TCCTGATTCCATCCTTCATA+AGG | + | chr7.4:82843077-82843096 | None:intergenic | 40.0% | |
| TCCTTATGAAGGATGGAATC+AGG | - | chr7.4:82843073-82843092 | MS.gene44746:intron | 40.0% | |
| TCTGAATGCTTAGAACGATG+AGG | + | chr7.4:82842182-82842201 | None:intergenic | 40.0% | |
| TGCATGCAGAAGAATGAGAA+TGG | + | chr7.4:82845289-82845308 | None:intergenic | 40.0% | |
| TGGAGAAACAGGAGAAACAT+AGG | + | chr7.4:82845355-82845374 | None:intergenic | 40.0% | |
| TGTGCTTCATAGGTGATGAT+TGG | - | chr7.4:82842786-82842805 | MS.gene44746:intron | 40.0% | |
| TTGAAACCACAGTTCAACTG+CGG | - | chr7.4:82847185-82847204 | MS.gene44746:intron | 40.0% | |
| TTGAGAGAGGAAGATGTGTT+TGG | + | chr7.4:82841936-82841955 | None:intergenic | 40.0% | |
| ! | AGAAGGAATAGTGGAGAAAC+AGG | + | chr7.4:82845366-82845385 | None:intergenic | 40.0% |
| ! | AGAGTCAGTTTAGGACTAGT+AGG | - | chr7.4:82846537-82846556 | MS.gene44746:CDS | 40.0% |
| ! | AGTTTAGGACTAGTAGGTGA+TGG | - | chr7.4:82846543-82846562 | MS.gene44746:CDS | 40.0% |
| ! | ATTGTTGTTGGATTGAACCG+GGG | - | chr7.4:82847153-82847172 | MS.gene44746:intron | 40.0% |
| ! | CGGTTCAATTGGTTTAACCA+CGG | + | chr7.4:82847301-82847320 | None:intergenic | 40.0% |
| ! | CGTTTCTAAGGATACAGACT+TGG | - | chr7.4:82847364-82847383 | MS.gene44746:intron | 40.0% |
| ! | GGTGCAACAATACATTTTCC+AGG | - | chr7.4:82846110-82846129 | MS.gene44746:intron | 40.0% |
| ! | GTTGGTAGACGAACAAATAC+TGG | - | chr7.4:82846302-82846321 | MS.gene44746:intron | 40.0% |
| ! | TGAGTTTTCTGCGAGAACAA+TGG | - | chr7.4:82845416-82845435 | MS.gene44746:intron | 40.0% |
| ! | TGGAAATTTGAAGCCATGTC+AGG | + | chr7.4:82844446-82844465 | None:intergenic | 40.0% |
| ! | TGTCGAGATCCCTGAATTTT+AGG | + | chr7.4:82843471-82843490 | None:intergenic | 40.0% |
| ! | TTTGTCATCTAGTTCAACCG+TGG | - | chr7.4:82847281-82847300 | MS.gene44746:intron | 40.0% |
| !! | AAACGGACTAAAGATCGAAC+CGG | + | chr7.4:82847349-82847368 | None:intergenic | 40.0% |
| !! | GTGACATATTTAGGGGTGTT+TGG | + | chr7.4:82847032-82847051 | None:intergenic | 40.0% |
| !! | TGAGCTGGATTCTAGCTTAT+AGG | + | chr7.4:82843434-82843453 | None:intergenic | 40.0% |
| AAGAAGAGTTGCACGAAGCA+TGG | + | chr7.4:82845247-82845266 | None:intergenic | 45.0% | |
| AATCCTAATTGCAGATGCGC+AGG | + | chr7.4:82845090-82845109 | None:intergenic | 45.0% | |
| AATCGCATTTGCATGGTCAG+GGG | + | chr7.4:82844353-82844372 | None:intergenic | 45.0% | |
| ACAATATATGCAGCCCTGCT+TGG | + | chr7.4:82843930-82843949 | None:intergenic | 45.0% | |
| ACCGCAGTGTTGTCAAATAG+AGG | - | chr7.4:82844860-82844879 | MS.gene44746:CDS | 45.0% | |
| ACCTGAAGATTGTAGCGCTT+GGG | + | chr7.4:82846243-82846262 | None:intergenic | 45.0% | |
| ACTACTTCTGTGGATGAACC+AGG | + | chr7.4:82844329-82844348 | None:intergenic | 45.0% | |
| ACTTCAAGGTTGTCACCAGT+CGG | + | chr7.4:82845492-82845511 | None:intergenic | 45.0% | |
| AGAAGAGTTGCACGAAGCAT+GGG | + | chr7.4:82845246-82845265 | None:intergenic | 45.0% | |
| ATGAACCCATCAGAGGGAAA+AGG | - | chr7.4:82842150-82842169 | MS.gene44746:intron | 45.0% | |
| ATTCAGAAAGGTTGCATCCC+TGG | - | chr7.4:82844308-82844327 | MS.gene44746:intron | 45.0% | |
| CAATCGCATTTGCATGGTCA+GGG | + | chr7.4:82844354-82844373 | None:intergenic | 45.0% | |
| CATGTCCAATCGCATTTGCA+TGG | + | chr7.4:82844360-82844379 | None:intergenic | 45.0% | |
| CCCCTGTCAATATAGCTCAA+AGG | - | chr7.4:82846331-82846350 | MS.gene44746:CDS | 45.0% | |
| CCCTCCACAACTATTCAGAA+AGG | - | chr7.4:82844296-82844315 | MS.gene44746:intron | 45.0% | |
| CTAAGGATACAGACTTGGCA+TGG | - | chr7.4:82847369-82847388 | MS.gene44746:intron | 45.0% | |
| CTACTTCTGTGGATGAACCA+GGG | + | chr7.4:82844328-82844347 | None:intergenic | 45.0% | |
| CTATGAAGAGACACTCCTAC+TGG | + | chr7.4:82844834-82844853 | None:intergenic | 45.0% | |
| GCCATGTCAGGATTAGATAC+AGG | + | chr7.4:82844434-82844453 | None:intergenic | 45.0% | |
| GCCTCTATTTGACAACACTG+CGG | + | chr7.4:82844864-82844883 | None:intergenic | 45.0% | |
| GCCTGTATCTAATCCTGACA+TGG | - | chr7.4:82844430-82844449 | MS.gene44746:intron | 45.0% | |
| GCGATTGGACATGTTTGATC+CGG | - | chr7.4:82844367-82844386 | MS.gene44746:intron | 45.0% | |
| GCTTCTCTTCTGAACCTCTT+TGG | + | chr7.4:82847541-82847560 | None:intergenic | 45.0% | |
| GTCTCGGTGGAAATTGATGT+TGG | - | chr7.4:82846284-82846303 | MS.gene44746:intron | 45.0% | |
| GTGCACGATTGTAAACCAAG+TGG | + | chr7.4:82845949-82845968 | None:intergenic | 45.0% | |
| TATACCAATGCTGTCCATCG+CGG | + | chr7.4:82844935-82844954 | None:intergenic | 45.0% | |
| TATGGTGACTCAACAGATGC+TGG | - | chr7.4:82844403-82844422 | MS.gene44746:intron | 45.0% | |
| TCTCAAGTGCCTACTCTCAA+AGG | - | chr7.4:82844576-82844595 | MS.gene44746:intron | 45.0% | |
| TGAACCCATCAGAGGGAAAA+GGG | - | chr7.4:82842151-82842170 | MS.gene44746:intron | 45.0% | |
| TGACAACCTTGAAGTGGCTT+GGG | - | chr7.4:82845497-82845516 | MS.gene44746:intron | 45.0% | |
| TGGAGGGGTCAGACATTATT+GGG | + | chr7.4:82844283-82844302 | None:intergenic | 45.0% | |
| TGGCCCGTTTCCAGTTAAAT+TGG | + | chr7.4:82847108-82847127 | None:intergenic | 45.0% | |
| TTCTGCATGCAAACTGCGAA+GGG | - | chr7.4:82845298-82845317 | MS.gene44746:intron | 45.0% | |
| TTTGTCCCAGACCAATGTCT+CGG | - | chr7.4:82846268-82846287 | MS.gene44746:intron | 45.0% | |
| ! | CGTAGTTCAACCGGTTCAAT+TGG | + | chr7.4:82847312-82847331 | None:intergenic | 45.0% |
| ! | CTTTCGAGTCGTAGTTCAAC+CGG | + | chr7.4:82847321-82847340 | None:intergenic | 45.0% |
| ! | GAGCCAGTGCTATTATTCCA+AGG | + | chr7.4:82844107-82844126 | None:intergenic | 45.0% |
| ! | TTAGCCCTTTTCCCTCTGAT+GGG | + | chr7.4:82842158-82842177 | None:intergenic | 45.0% |
| ! | TTAGGACTAGTAGGTGATGG+TGG | - | chr7.4:82846546-82846565 | MS.gene44746:CDS | 45.0% |
| !! | GGTTTGCTAAGCCATACTTG+AGG | + | chr7.4:82844470-82844489 | None:intergenic | 45.0% |
| !! | GTTCGGTGTTTGTGCTTCAT+AGG | - | chr7.4:82842776-82842795 | MS.gene44746:intron | 45.0% |
| !! | TCTTTGTAGCACCGACACTT+TGG | - | chr7.4:82842359-82842378 | MS.gene44746:intron | 45.0% |
| AAGAGTTGCACGAAGCATGG+GGG | + | chr7.4:82845244-82845263 | None:intergenic | 50.0% | |
| AAGGTGGATGAACCCATCAG+AGG | - | chr7.4:82842143-82842162 | MS.gene44746:intron | 50.0% | |
| ACCATACCACCGCTAACAAC+CGG | + | chr7.4:82844389-82844408 | None:intergenic | 50.0% | |
| ACCCAAGCGCTACAATCTTC+AGG | - | chr7.4:82846239-82846258 | MS.gene44746:intron | 50.0% | |
| AGCAATGTGGTCCGTTGTGT+CGG | - | chr7.4:82845013-82845032 | MS.gene44746:CDS | 50.0% | |
| AGCACTATAGCGCGCTATCA+CGG | - | chr7.4:82844979-82844998 | MS.gene44746:CDS | 50.0% | |
| AGGTGGATGAACCCATCAGA+GGG | - | chr7.4:82842144-82842163 | MS.gene44746:intron | 50.0% | |
| CACAGACACATGTCAGACAC+CGG | + | chr7.4:82842390-82842409 | None:intergenic | 50.0% | |
| CACCTGAAGATTGTAGCGCT+TGG | + | chr7.4:82846244-82846263 | None:intergenic | 50.0% | |
| CCAATCGCATTTGCATGGTC+AGG | + | chr7.4:82844355-82844374 | None:intergenic | 50.0% | |
| CCTGACCATGCAAATGCGAT+TGG | - | chr7.4:82844352-82844371 | MS.gene44746:intron | 50.0% | |
| CTACGACTCGAAAGTCTCAC+CGG | - | chr7.4:82847327-82847346 | MS.gene44746:intron | 50.0% | |
| CTTCTGCATGCAAACTGCGA+AGG | - | chr7.4:82845297-82845316 | MS.gene44746:intron | 50.0% | |
| GAAGAGTTGCACGAAGCATG+GGG | + | chr7.4:82845245-82845264 | None:intergenic | 50.0% | |
| GACTGGTGACAACCTTGAAG+TGG | - | chr7.4:82845491-82845510 | MS.gene44746:intron | 50.0% | |
| GAGGCAGATGGAAAACAACG+AGG | + | chr7.4:82846768-82846787 | None:intergenic | 50.0% | |
| GATCTCGACATTGTTTCCCC+TGG | - | chr7.4:82843481-82843500 | MS.gene44746:intron | 50.0% | |
| GCCATTCTTCTTCCTGCGAA+CGG | - | chr7.4:82845323-82845342 | MS.gene44746:intron | 50.0% | |
| GGATTGAACCGGGGTTAAAG+CGG | - | chr7.4:82847162-82847181 | MS.gene44746:intron | 50.0% | |
| GGTTTCAACCGCTTTAACCC+CGG | + | chr7.4:82847173-82847192 | None:intergenic | 50.0% | |
| GTGACAACCTTGAAGTGGCT+TGG | - | chr7.4:82845496-82845515 | MS.gene44746:intron | 50.0% | |
| GTGGAGGGGTCAGACATTAT+TGG | + | chr7.4:82844284-82844303 | None:intergenic | 50.0% | |
| TATATGCAGCCCTGCTTGGT+AGG | + | chr7.4:82843926-82843945 | None:intergenic | 50.0% | |
| TCCATTCCCAAGCCACTTCA+AGG | + | chr7.4:82845506-82845525 | None:intergenic | 50.0% | |
| TCCGTTCGCAGGAAGAAGAA+TGG | + | chr7.4:82845327-82845346 | None:intergenic | 50.0% | |
| TGCTAAGCCATACTTGAGGC+TGG | + | chr7.4:82844466-82844485 | None:intergenic | 50.0% | |
| TTTCCACCGAGACATTGGTC+TGG | + | chr7.4:82846277-82846296 | None:intergenic | 50.0% | |
| TTTGATCCGGTTGTTAGCGG+TGG | - | chr7.4:82844380-82844399 | MS.gene44746:intron | 50.0% | |
| ! | ACCTTGAAGTGGCTTGGGAA+TGG | - | chr7.4:82845502-82845521 | MS.gene44746:intron | 50.0% |
| ! | GTGTTGTGACTTGGCAGTGA+AGG | - | chr7.4:82842124-82842143 | MS.gene44746:intron | 50.0% |
| ! | GTTAGCCCTTTTCCCTCTGA+TGG | + | chr7.4:82842159-82842178 | None:intergenic | 50.0% |
| ! | TCAACTGCGGCTGGTTCAAT+CGG | - | chr7.4:82847198-82847217 | MS.gene44746:CDS | 50.0% |
| ! | TTCCACCGAGACATTGGTCT+GGG | + | chr7.4:82846276-82846295 | None:intergenic | 50.0% |
| ! | TTGTGACTTGGCAGTGAAGG+TGG | - | chr7.4:82842127-82842146 | MS.gene44746:intron | 50.0% |
| !! | GATCAAGGCTCAAGTTGAGC+TGG | + | chr7.4:82843449-82843468 | None:intergenic | 50.0% |
| AACCACAGTTCAACTGCGGC+TGG | - | chr7.4:82847189-82847208 | MS.gene44746:intron | 55.0% | |
| AACCAGCCGCAGTTGAACTG+TGG | + | chr7.4:82847194-82847213 | None:intergenic | 55.0% | |
| CACCGACACTTTGGCATGTC+CGG | - | chr7.4:82842368-82842387 | MS.gene44746:intron | 55.0% | |
| CACCGGACATGCCAAAGTGT+CGG | + | chr7.4:82842373-82842392 | None:intergenic | 55.0% | |
| CATAGGCTTTCTCCGTTCGC+AGG | + | chr7.4:82845338-82845357 | None:intergenic | 55.0% | |
| GCTCCTGCGCATCTGCAATT+AGG | - | chr7.4:82845084-82845103 | MS.gene44746:CDS | 55.0% | |
| GGACTCGAGTAGCAGCAATG+TGG | - | chr7.4:82845000-82845019 | MS.gene44746:CDS | 55.0% | |
| GGTCAGGGGAACTACTTCTG+TGG | + | chr7.4:82844339-82844358 | None:intergenic | 55.0% | |
| TCCGGTTGTTAGCGGTGGTA+TGG | - | chr7.4:82844385-82844404 | MS.gene44746:intron | 55.0% | |
| ! | ACTCCTACTGGCTACTGCTG+CGG | + | chr7.4:82844822-82844841 | None:intergenic | 55.0% |
| ! | CTGTTTTCTGCGATCCGCGA+TGG | - | chr7.4:82844918-82844937 | MS.gene44746:CDS | 55.0% |
| ! | GGTTGGTGTTTCAGACGAGG+AGG | + | chr7.4:82845445-82845464 | None:intergenic | 55.0% |
| !! | GGAGGTTGGTGTTTCAGACG+AGG | + | chr7.4:82845448-82845467 | None:intergenic | 55.0% |
| CGATCCGCGATGGACAGCAT+TGG | - | chr7.4:82844928-82844947 | MS.gene44746:CDS | 60.0% | |
| GTCCCAGACCAATGTCTCGG+TGG | - | chr7.4:82846271-82846290 | MS.gene44746:intron | 60.0% | |
| TGCAGCCACGACCGACACAA+CGG | + | chr7.4:82845027-82845046 | None:intergenic | 60.0% | |
| TTGCAGATGCGCAGGAGCGA+CGG | + | chr7.4:82845082-82845101 | None:intergenic | 60.0% | |
| CAGCCGCAGCAGTAGCCAGT+AGG | - | chr7.4:82844816-82844835 | MS.gene44746:intron | 65.0% | |
| TGCAGATGCGCAGGAGCGAC+GGG | + | chr7.4:82845081-82845100 | None:intergenic | 65.0% | |
| ! | GTGGTCCGTTGTGTCGGTCG+TGG | - | chr7.4:82845019-82845038 | MS.gene44746:CDS | 65.0% |
| GCAGATGCGCAGGAGCGACG+GGG | + | chr7.4:82845080-82845099 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 82841861 | 82847567 | 82841861 | ID=MS.gene44746 |
| chr7.4 | mRNA | 82841861 | 82847567 | 82841861 | ID=MS.gene44746.t1;Parent=MS.gene44746 |
| chr7.4 | exon | 82847453 | 82847567 | 82847453 | ID=MS.gene44746.t1.exon1;Parent=MS.gene44746.t1 |
| chr7.4 | CDS | 82847453 | 82847567 | 82847453 | ID=cds.MS.gene44746.t1;Parent=MS.gene44746.t1 |
| chr7.4 | exon | 82847191 | 82847287 | 82847191 | ID=MS.gene44746.t1.exon2;Parent=MS.gene44746.t1 |
| chr7.4 | CDS | 82847191 | 82847287 | 82847191 | ID=cds.MS.gene44746.t1;Parent=MS.gene44746.t1 |
| chr7.4 | exon | 82846519 | 82846588 | 82846519 | ID=MS.gene44746.t1.exon3;Parent=MS.gene44746.t1 |
| chr7.4 | CDS | 82846519 | 82846588 | 82846519 | ID=cds.MS.gene44746.t1;Parent=MS.gene44746.t1 |
| chr7.4 | exon | 82846310 | 82846405 | 82846310 | ID=MS.gene44746.t1.exon4;Parent=MS.gene44746.t1 |
| chr7.4 | CDS | 82846310 | 82846405 | 82846310 | ID=cds.MS.gene44746.t1;Parent=MS.gene44746.t1 |
| chr7.4 | exon | 82845181 | 82845261 | 82845181 | ID=MS.gene44746.t1.exon5;Parent=MS.gene44746.t1 |
| chr7.4 | CDS | 82845181 | 82845261 | 82845181 | ID=cds.MS.gene44746.t1;Parent=MS.gene44746.t1 |
| chr7.4 | exon | 82844831 | 82845150 | 82844831 | ID=MS.gene44746.t1.exon6;Parent=MS.gene44746.t1 |
| chr7.4 | CDS | 82844831 | 82845150 | 82844831 | ID=cds.MS.gene44746.t1;Parent=MS.gene44746.t1 |
| chr7.4 | exon | 82843076 | 82843205 | 82843076 | ID=MS.gene44746.t1.exon7;Parent=MS.gene44746.t1 |
| chr7.4 | CDS | 82843076 | 82843205 | 82843076 | ID=cds.MS.gene44746.t1;Parent=MS.gene44746.t1 |
| chr7.4 | exon | 82841861 | 82841971 | 82841861 | ID=MS.gene44746.t1.exon8;Parent=MS.gene44746.t1 |
| chr7.4 | CDS | 82841861 | 82841971 | 82841861 | ID=cds.MS.gene44746.t1;Parent=MS.gene44746.t1 |
| Gene Sequence |
| Protein sequence |
