AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44831

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44831.t1 MTR_5g069030 93.610 626 32 4 1 620 1 624 0.0 1187
MS.gene44831.t1 MTR_3g093050 48.799 666 236 16 1 634 1 593 0.0 555
MS.gene44831.t1 MTR_3g093050 47.820 665 271 15 1 634 1 620 0.0 541
MS.gene44831.t1 MTR_3g093040 69.545 220 60 1 16 235 99 311 3.08e-111 337
MS.gene44831.t1 MTR_6g477900 46.957 230 108 3 25 240 6 235 1.96e-58 196
MS.gene44831.t1 MTR_3g064580 62.500 152 56 1 25 175 6 157 4.43e-58 207
MS.gene44831.t1 MTR_2g064090 52.632 190 77 3 25 208 6 188 1.23e-57 198
MS.gene44831.t1 MTR_5g076850 61.589 151 58 0 25 175 6 156 1.11e-56 203
MS.gene44831.t1 MTR_5g014300 54.321 162 64 3 25 179 6 164 2.35e-52 183
MS.gene44831.t1 MTR_3g070030 54.140 157 67 2 24 177 18 172 2.19e-51 181
MS.gene44831.t1 MTR_8g063550 50.955 157 77 0 20 176 1 157 2.42e-51 181
MS.gene44831.t1 MTR_8g023860 54.839 155 61 4 21 172 8 156 7.68e-51 182
MS.gene44831.t1 MTR_8g063550 50.955 157 77 0 20 176 1 157 9.99e-51 182
MS.gene44831.t1 MTR_0036s0150 55.414 157 67 3 20 175 1 155 1.05e-50 184
MS.gene44831.t1 MTR_8g063550 50.955 157 77 0 20 176 1 157 1.28e-50 181
MS.gene44831.t1 MTR_2g086880 53.503 157 64 3 16 172 10 157 3.23e-50 182
MS.gene44831.t1 MTR_2g086880 53.503 157 64 3 16 172 10 157 4.38e-50 184
MS.gene44831.t1 MTR_8g023840 57.616 151 55 4 25 172 11 155 4.39e-50 179
MS.gene44831.t1 MTR_3g096140 38.258 264 136 4 28 278 10 259 4.56e-50 175
MS.gene44831.t1 MTR_4g036030 52.229 157 72 3 21 176 3 157 1.23e-49 176
MS.gene44831.t1 MTR_5g012080 51.899 158 73 3 21 176 3 159 3.19e-49 175
MS.gene44831.t1 MTR_4g098630 54.717 159 67 3 25 179 6 163 3.59e-49 174
MS.gene44831.t1 MTR_3g096140 38.346 266 133 4 28 278 10 259 9.73e-49 174
MS.gene44831.t1 MTR_1g090723 53.691 149 68 1 28 175 11 159 1.54e-48 180
MS.gene44831.t1 MTR_1g090723 54.362 149 66 2 28 175 11 158 2.26e-48 179
MS.gene44831.t1 MTR_1g090723 54.362 149 66 2 28 175 11 158 4.00e-48 179
MS.gene44831.t1 MTR_8g076110 47.826 161 81 2 25 184 6 164 9.32e-48 170
MS.gene44831.t1 MTR_4g108760 53.254 169 68 4 15 175 2 167 1.15e-47 171
MS.gene44831.t1 MTR_4g101680 47.879 165 83 2 21 184 3 165 1.18e-47 171
MS.gene44831.t1 MTR_1g097300 50.286 175 81 1 1 175 1 169 2.59e-47 176
MS.gene44831.t1 MTR_3g435150 43.723 231 108 6 15 229 2 226 3.54e-47 168
MS.gene44831.t1 MTR_3g096920 49.171 181 75 5 25 200 7 175 7.66e-47 167
MS.gene44831.t1 MTR_1g090720 53.205 156 67 1 28 177 45 200 7.96e-47 172
MS.gene44831.t1 MTR_8g093580 47.134 157 83 0 20 176 1 157 8.72e-47 172
MS.gene44831.t1 MTR_8g467490 50.307 163 68 4 28 179 17 177 9.67e-47 170
MS.gene44831.t1 MTR_4g035590 52.258 155 68 3 25 177 8 158 1.13e-46 169
MS.gene44831.t1 MTR_5g021710 50.980 153 72 2 25 176 8 158 1.68e-46 168
MS.gene44831.t1 MTR_2g062730 51.613 155 71 3 25 177 10 162 1.82e-46 167
MS.gene44831.t1 MTR_4g081870 51.572 159 67 3 24 176 8 162 2.45e-46 165
MS.gene44831.t1 MTR_2g079990 50.000 164 77 2 12 175 6 164 3.21e-46 167
MS.gene44831.t1 MTR_6g084430 52.980 151 67 2 25 175 5 151 3.34e-46 166
MS.gene44831.t1 MTR_7g011130 42.995 207 95 4 10 199 8 208 5.33e-46 167
MS.gene44831.t1 MTR_7g011120 44.385 187 91 3 24 199 7 191 1.26e-45 164
MS.gene44831.t1 MTR_6g012670 51.205 166 70 3 24 187 19 175 2.23e-45 164
MS.gene44831.t1 MTR_5g041940 50.307 163 65 3 24 177 2 157 4.90e-45 161
MS.gene44831.t1 MTR_7g085220 42.723 213 83 6 25 215 8 203 7.86e-45 163
MS.gene44831.t1 MTR_5g040420 48.148 162 72 4 28 179 17 176 8.44e-45 164
MS.gene44831.t1 MTR_1g096430 51.316 152 71 2 25 175 7 156 1.04e-44 162
MS.gene44831.t1 MTR_8g094580 50.943 159 67 4 24 176 6 159 1.44e-44 160
MS.gene44831.t1 MTR_8g023930 44.776 201 94 7 25 218 24 214 1.70e-44 166
MS.gene44831.t1 MTR_3g088110 51.266 158 67 4 24 176 6 158 2.03e-44 160
MS.gene44831.t1 MTR_6g032770 48.765 162 67 4 25 177 18 172 2.60e-44 163
MS.gene44831.t1 MTR_2g080010 46.988 166 73 3 25 177 15 178 6.51e-44 161
MS.gene44831.t1 MTR_6g011860 46.552 174 81 3 12 175 2 173 7.70e-44 162
MS.gene44831.t1 MTR_3g109340 54.248 153 65 3 25 175 22 171 8.15e-44 160
MS.gene44831.t1 MTR_4g134460 51.678 149 67 3 28 175 57 201 1.08e-43 162
MS.gene44831.t1 MTR_8g059170 50.920 163 74 3 20 179 9 168 1.23e-43 159
MS.gene44831.t1 MTR_3g109340 53.595 153 65 3 25 175 22 170 2.60e-43 159
MS.gene44831.t1 MTR_2g078700 51.852 162 62 4 25 177 23 177 3.92e-43 159
MS.gene44831.t1 MTR_8g024480 44.767 172 85 2 17 178 7 178 6.95e-43 160
MS.gene44831.t1 MTR_2g064470 50.311 161 65 4 24 178 10 161 7.27e-43 157
MS.gene44831.t1 MTR_2g079990 54.286 140 59 2 12 151 6 140 7.29e-43 159
MS.gene44831.t1 MTR_3g096920 58.594 128 50 2 24 151 6 130 8.27e-43 157
MS.gene44831.t1 MTR_1g008740 53.247 154 66 4 25 175 13 163 1.45e-42 157
MS.gene44831.t1 MTR_1g008740 53.247 154 66 4 25 175 27 177 1.46e-42 157
MS.gene44831.t1 MTR_3g070040 48.824 170 71 4 24 189 7 164 3.84e-42 155
MS.gene44831.t1 MTR_7g085260 50.000 162 63 4 25 175 17 171 6.92e-42 156
MS.gene44831.t1 MTR_3g096140 36.471 255 127 5 41 278 2 238 7.02e-42 155
MS.gene44831.t1 MTR_4g089135 45.556 180 71 4 25 179 15 192 7.37e-42 155
MS.gene44831.t1 MTR_8g023900 47.059 187 84 6 25 200 12 194 9.24e-42 158
MS.gene44831.t1 MTR_8g023900 44.560 193 92 6 27 212 195 379 1.51e-40 154
MS.gene44831.t1 MTR_7g005280 51.282 156 65 4 24 176 14 161 1.68e-41 151
MS.gene44831.t1 MTR_2157s0010 47.273 165 69 5 25 175 8 168 8.18e-41 150
MS.gene44831.t1 MTR_7g100990 38.247 251 132 8 24 260 10 251 1.23e-40 151
MS.gene44831.t1 MTR_3g116070 56.154 130 52 3 25 151 23 150 8.26e-40 149
MS.gene44831.t1 MTR_2g093810 44.693 179 86 6 25 196 14 186 3.48e-39 147
MS.gene44831.t1 MTR_1g069805 48.366 153 71 3 25 175 10 156 5.20e-39 145
MS.gene44831.t1 MTR_5g090970 48.466 163 69 6 25 175 19 178 2.57e-37 141
MS.gene44831.t1 MTR_4g075980 47.020 151 70 3 28 175 18 161 5.19e-37 140
MS.gene44831.t1 MTR_7g097090 47.682 151 71 3 25 173 10 154 6.17e-37 140
MS.gene44831.t1 MTR_2g068880 43.258 178 80 6 16 175 12 186 9.86e-37 140
MS.gene44831.t1 MTR_2g068920 49.275 138 64 3 19 151 14 150 1.69e-36 139
MS.gene44831.t1 MTR_3g098810 43.195 169 82 3 22 180 11 175 4.12e-36 136
MS.gene44831.t1 MTR_8g099750 42.162 185 85 5 22 197 11 182 4.34e-36 135
MS.gene44831.t1 MTR_5g090970 46.626 163 71 6 25 175 19 177 4.68e-36 138
MS.gene44831.t1 MTR_3g098810 47.761 134 62 2 22 151 11 140 2.16e-35 132
MS.gene44831.t1 MTR_8g023880 47.059 170 59 7 25 175 7 164 1.85e-34 132
MS.gene44831.t1 MTR_4g052620 42.038 157 82 5 25 173 5 160 8.85e-31 121
MS.gene44831.t1 MTR_2g086690 41.667 156 83 5 26 173 5 160 3.97e-30 119
MS.gene44831.t1 MTR_8g094580 54.455 101 37 3 82 176 8 105 2.75e-28 113
MS.gene44831.t1 MTR_7g105170 37.576 165 91 6 22 175 1 164 3.43e-28 114
MS.gene44831.t1 MTR_7g070140 48.101 79 39 1 75 151 12 90 1.96e-19 85.5
MS.gene44831.t1 MTR_4g094302 36.434 129 70 3 25 151 11 129 5.83e-19 84.7
MS.gene44831.t1 MTR_4g094302 36.434 129 70 3 25 151 11 129 7.13e-19 85.5
MS.gene44831.t1 MTR_7g083330 36.719 128 77 3 24 150 17 141 5.79e-16 77.0
MS.gene44831.t1 MTR_7g083360 35.433 127 78 3 25 150 10 133 3.25e-14 70.9
MS.gene44831.t1 MTR_8g093790 33.758 157 78 7 24 178 9 141 8.22e-14 70.9
MS.gene44831.t1 MTR_7g070150 42.647 68 36 1 123 190 8 72 7.15e-13 65.1
MS.gene44831.t1 MTR_3g096400 33.133 166 85 8 24 174 6 160 7.73e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44831.t1 AT4G35580 44.348 460 189 18 17 459 1 410 1.15e-97 309
MS.gene44831.t1 AT4G35580 44.348 460 189 18 17 459 1 410 1.15e-97 309
MS.gene44831.t1 AT4G35580 44.348 460 189 18 17 459 1 410 1.76e-97 308
MS.gene44831.t1 AT3G49530 39.485 466 175 16 15 459 3 382 3.36e-91 288
MS.gene44831.t1 AT1G33060 37.115 617 281 20 16 561 15 595 4.43e-91 296
MS.gene44831.t1 AT3G49530 39.530 468 172 16 15 459 3 382 4.49e-91 290
MS.gene44831.t1 AT1G33060 37.624 606 271 20 16 550 15 584 6.74e-91 295
MS.gene44831.t1 AT5G24590 46.243 346 121 11 15 330 3 313 1.33e-90 288
MS.gene44831.t1 AT3G17730 62.252 151 57 0 25 175 6 156 7.04e-61 203
MS.gene44831.t1 AT1G65910 54.054 185 77 1 25 201 6 190 1.64e-58 208
MS.gene44831.t1 AT5G17260 62.500 152 56 1 25 175 6 157 1.73e-57 201
MS.gene44831.t1 AT3G03200 62.500 152 56 1 25 175 6 157 2.15e-56 198
MS.gene44831.t1 AT3G10500 44.889 225 114 3 21 243 5 221 1.33e-53 192
MS.gene44831.t1 AT3G10490 50.820 183 87 2 3 184 7 187 3.70e-53 182
MS.gene44831.t1 AT3G10480 51.351 185 83 3 3 184 7 187 6.75e-53 188
MS.gene44831.t1 AT3G10480 50.549 182 88 1 3 184 7 186 6.87e-53 188
MS.gene44831.t1 AT4G17980 40.000 290 127 8 25 275 6 287 6.65e-52 181
MS.gene44831.t1 AT4G17980 42.510 247 107 6 25 244 6 244 6.98e-52 180
MS.gene44831.t1 AT3G10490 50.820 183 87 2 3 184 7 187 1.19e-51 185
MS.gene44831.t1 AT5G04410 53.548 155 72 0 21 175 5 159 7.16e-51 185
MS.gene44831.t1 AT5G46590 54.140 157 66 3 25 177 6 160 8.65e-51 178
MS.gene44831.t1 AT1G54330 58.278 151 60 1 25 175 6 153 2.90e-50 177
MS.gene44831.t1 AT1G62700 52.229 157 72 3 21 176 3 157 7.06e-50 178
MS.gene44831.t1 AT1G62700 52.229 157 72 3 21 176 3 157 7.06e-50 178
MS.gene44831.t1 AT1G12260 51.592 157 73 3 21 176 3 157 1.86e-49 176
MS.gene44831.t1 AT1G12260 51.592 157 73 3 21 176 3 157 3.21e-49 177
MS.gene44831.t1 AT5G46590 59.375 128 51 1 25 151 6 133 4.45e-49 173
MS.gene44831.t1 AT5G39610 55.844 154 64 2 25 176 20 171 5.68e-49 172
MS.gene44831.t1 AT5G07680 55.063 158 57 3 25 175 3 153 1.00e-48 173
MS.gene44831.t1 AT5G07680 55.063 158 57 3 25 175 17 167 1.16e-48 173
MS.gene44831.t1 AT5G62380 49.091 165 81 2 21 184 3 165 1.61e-48 173
MS.gene44831.t1 AT5G62380 49.091 165 81 2 21 184 3 165 1.61e-48 173
MS.gene44831.t1 AT5G61430 55.556 153 64 2 25 175 16 166 1.86e-48 173
MS.gene44831.t1 AT4G10350 52.597 154 72 1 25 177 9 162 2.05e-48 173
MS.gene44831.t1 AT2G27300 40.664 241 112 6 20 252 9 226 3.40e-48 172
MS.gene44831.t1 AT1G33280 51.534 163 75 2 25 186 8 167 4.17e-48 171
MS.gene44831.t1 AT3G44290 55.172 145 57 2 28 172 17 153 5.93e-48 168
MS.gene44831.t1 AT1G32510 51.829 164 71 2 25 180 6 169 1.17e-47 169
MS.gene44831.t1 AT4G27410 50.000 168 79 2 12 179 4 166 1.73e-47 169
MS.gene44831.t1 AT3G44290 55.172 145 57 2 28 172 17 153 6.12e-47 169
MS.gene44831.t1 AT5G08790 53.459 159 62 4 25 176 7 160 9.15e-47 167
MS.gene44831.t1 AT3G29035 56.291 151 62 3 25 173 24 172 1.10e-46 167
MS.gene44831.t1 AT5G22290 52.000 150 65 2 28 177 24 166 1.69e-46 167
MS.gene44831.t1 AT4G36160 50.327 153 73 2 25 176 10 160 2.41e-46 168
MS.gene44831.t1 AT4G36160 50.327 153 73 2 25 176 10 160 2.41e-46 168
MS.gene44831.t1 AT4G36160 50.327 153 73 2 25 176 14 164 2.78e-46 168
MS.gene44831.t1 AT3G15500 50.303 165 77 2 12 176 4 163 3.35e-46 166
MS.gene44831.t1 AT3G10480 44.811 212 78 4 9 184 12 220 3.99e-46 171
MS.gene44831.t1 AT2G18060 50.327 153 73 2 25 176 9 159 5.19e-46 167
MS.gene44831.t1 AT2G18060 50.327 153 73 2 25 176 9 159 5.19e-46 167
MS.gene44831.t1 AT1G69490 48.521 169 77 3 17 179 1 165 7.09e-46 164
MS.gene44831.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.46e-46 169
MS.gene44831.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.46e-46 169
MS.gene44831.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.46e-46 169
MS.gene44831.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.46e-46 169
MS.gene44831.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.46e-46 169
MS.gene44831.t1 AT1G52890 49.697 165 78 2 12 176 4 163 1.67e-45 164
MS.gene44831.t1 AT3G18400 53.289 152 66 3 25 175 5 152 2.14e-45 164
MS.gene44831.t1 AT5G66300 49.673 153 75 2 25 176 12 163 2.55e-45 163
MS.gene44831.t1 AT5G63790 53.459 159 62 5 25 176 50 203 5.37e-45 163
MS.gene44831.t1 AT5G63790 53.459 159 62 5 25 176 60 213 5.77e-45 163
MS.gene44831.t1 AT2G24430 53.548 155 67 3 25 177 16 167 7.06e-45 162
MS.gene44831.t1 AT2G24430 53.548 155 67 3 25 177 16 167 7.06e-45 162
MS.gene44831.t1 AT5G64060 50.676 148 73 0 28 175 9 156 1.25e-44 163
MS.gene44831.t1 AT1G26870 44.920 187 86 4 28 199 19 203 1.39e-44 164
MS.gene44831.t1 AT2G02450 51.007 149 68 3 28 175 54 198 1.42e-44 164
MS.gene44831.t1 AT2G02450 51.007 149 68 3 28 175 54 198 1.43e-44 164
MS.gene44831.t1 AT1G76420 52.941 153 67 3 25 175 22 171 1.72e-44 162
MS.gene44831.t1 AT4G27410 45.902 183 81 2 12 179 4 183 2.14e-44 161
MS.gene44831.t1 AT1G34190 55.405 148 66 0 28 175 19 166 2.32e-44 167
MS.gene44831.t1 AT3G04060 51.534 163 64 4 25 179 20 175 4.04e-44 161
MS.gene44831.t1 AT1G34180 53.378 148 69 0 28 175 19 166 4.84e-44 164
MS.gene44831.t1 AT3G04070 47.126 174 78 5 25 186 10 181 5.52e-44 161
MS.gene44831.t1 AT5G18270 49.153 177 80 4 14 182 5 179 5.62e-44 160
MS.gene44831.t1 AT3G15170 43.119 218 99 7 25 233 20 221 6.04e-44 160
MS.gene44831.t1 AT5G18270 49.153 177 80 4 14 182 5 179 8.23e-44 160
MS.gene44831.t1 AT1G56010 48.795 166 69 4 24 180 18 176 1.22e-43 159
MS.gene44831.t1 AT2G46770 41.463 205 97 5 13 194 4 208 1.57e-43 160
MS.gene44831.t1 AT1G71930 48.684 152 75 2 25 175 9 158 2.35e-43 159
MS.gene44831.t1 AT1G71930 48.684 152 75 2 25 175 9 158 2.35e-43 159
MS.gene44831.t1 AT1G34180 53.378 148 69 0 28 175 19 166 2.66e-43 164
MS.gene44831.t1 AT1G01720 49.689 161 70 4 22 176 4 159 2.91e-43 157
MS.gene44831.t1 AT2G33480 53.247 154 65 3 24 176 14 161 3.27e-43 156
MS.gene44831.t1 AT5G13180 50.323 155 69 3 24 176 13 161 7.68e-43 155
MS.gene44831.t1 AT3G12977 44.920 187 94 5 25 205 18 201 1.24e-42 155
MS.gene44831.t1 AT1G32770 45.506 178 74 4 17 177 8 179 1.25e-42 157
MS.gene44831.t1 AT5G39820 45.665 173 69 5 28 177 23 193 1.26e-42 157
MS.gene44831.t1 AT2G33480 51.634 153 67 2 24 176 14 159 5.81e-42 153
MS.gene44831.t1 AT1G77450 48.101 158 72 4 24 176 9 161 8.26e-42 152
MS.gene44831.t1 AT1G61110 50.000 164 67 4 25 175 16 177 1.00e-41 154
MS.gene44831.t1 AT3G04070 43.158 190 78 5 25 186 10 197 1.56e-41 154
MS.gene44831.t1 AT2G43000 47.097 155 78 3 23 175 15 167 1.77e-41 152
MS.gene44831.t1 AT5G53950 50.888 169 65 5 25 184 17 176 6.42e-41 153
MS.gene44831.t1 AT1G34180 49.375 160 69 1 28 175 19 178 7.85e-41 155
MS.gene44831.t1 AT3G15510 40.887 203 98 4 29 218 21 214 1.17e-40 152
MS.gene44831.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.67e-40 152
MS.gene44831.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.67e-40 152
MS.gene44831.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.67e-40 152
MS.gene44831.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.67e-40 152
MS.gene44831.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.67e-40 152
MS.gene44831.t1 AT3G61910 41.573 178 84 3 17 177 3 177 2.23e-40 150
MS.gene44831.t1 AT1G34180 49.375 160 69 1 28 175 19 178 3.64e-40 155
MS.gene44831.t1 AT2G17040 36.154 260 146 6 28 274 9 261 8.24e-39 144
MS.gene44831.t1 AT4G28530 46.591 176 69 5 24 180 9 178 3.91e-38 145
MS.gene44831.t1 AT5G04395 45.714 140 62 2 25 150 28 167 5.93e-37 136
MS.gene44831.t1 AT1G32870 51.634 153 70 2 25 175 10 160 7.53e-37 145
MS.gene44831.t1 AT1G32870 51.634 153 70 2 25 175 10 160 8.43e-37 145
MS.gene44831.t1 AT1G32870 51.634 153 70 2 25 175 46 196 2.05e-36 144
MS.gene44831.t1 AT4G01550 40.884 181 91 5 27 199 6 178 7.67e-36 140
MS.gene44831.t1 AT3G12910 41.837 196 82 9 1 175 1 185 8.47e-36 137
MS.gene44831.t1 AT1G52880 46.626 163 73 4 29 179 21 181 7.13e-35 135
MS.gene44831.t1 AT5G61430 60.204 98 37 1 80 175 6 103 1.72e-33 129
MS.gene44831.t1 AT1G02230 42.045 176 86 8 26 193 4 171 2.36e-32 129
MS.gene44831.t1 AT4G01520 35.676 185 93 6 22 198 1 167 1.23e-30 122
MS.gene44831.t1 AT3G12977 45.736 129 65 2 82 205 20 148 1.32e-30 120
MS.gene44831.t1 AT4G10350 54.167 96 44 0 82 177 20 115 2.29e-30 121
MS.gene44831.t1 AT4G01540 35.955 178 88 6 27 196 6 165 4.51e-29 120
MS.gene44831.t1 AT4G01540 35.556 180 90 6 27 198 6 167 4.71e-29 120
MS.gene44831.t1 AT5G22380 41.139 158 86 5 23 173 3 160 5.99e-29 115
MS.gene44831.t1 AT4G01540 35.556 180 90 6 27 198 6 167 8.00e-29 120
MS.gene44831.t1 AT4G01540 35.955 178 88 6 27 196 6 165 9.36e-29 120
MS.gene44831.t1 AT1G02250 38.660 194 103 9 26 211 4 189 1.21e-28 118
MS.gene44831.t1 AT3G44350 38.650 163 95 4 24 181 4 166 5.40e-28 113
MS.gene44831.t1 AT1G56010 49.138 116 44 3 73 180 1 109 1.27e-27 112
MS.gene44831.t1 AT3G04420 39.062 192 98 6 26 206 4 187 2.55e-27 112
MS.gene44831.t1 AT3G04420 39.062 192 98 6 26 206 4 187 3.86e-27 113
MS.gene44831.t1 AT2G33480 48.077 104 54 0 73 176 1 104 1.01e-26 108
MS.gene44831.t1 AT3G44350 41.667 132 73 3 24 151 4 135 3.47e-26 105
MS.gene44831.t1 AT1G01010 39.264 163 82 4 27 179 5 160 6.64e-26 111
MS.gene44831.t1 AT3G10490 57.471 87 36 1 99 184 1 87 4.02e-24 104
MS.gene44831.t1 AT3G10490 57.471 87 36 1 99 184 1 87 4.02e-24 104
MS.gene44831.t1 AT1G02220 39.073 151 80 4 26 173 4 145 8.76e-23 101
MS.gene44831.t1 AT4G28530 47.273 110 40 2 24 117 9 116 3.46e-21 95.5
MS.gene44831.t1 AT2G43000 46.512 86 45 1 91 175 4 89 1.11e-18 85.1
MS.gene44831.t1 AT2G18060 50.704 71 33 1 106 176 3 71 2.41e-18 86.3
MS.gene44831.t1 AT5G64530 36.719 128 65 4 25 150 3 116 3.95e-18 82.4
MS.gene44831.t1 AT5G64530 30.108 186 92 6 25 194 3 166 1.56e-17 81.6
MS.gene44831.t1 AT5G22290 51.389 72 29 1 106 177 2 67 2.59e-17 82.4
MS.gene44831.t1 AT5G14000 31.783 129 82 2 24 150 14 138 2.18e-14 71.6
MS.gene44831.t1 AT5G50820 33.333 132 74 4 24 151 16 137 7.20e-14 71.2
MS.gene44831.t1 AT3G55210 29.448 163 95 6 25 173 11 167 8.14e-14 72.8
MS.gene44831.t1 AT3G04430 34.559 136 75 5 31 154 6 139 1.03e-13 70.9
MS.gene44831.t1 AT1G25580 27.731 238 139 9 25 248 58 276 1.53e-13 73.6
MS.gene44831.t1 AT5G14000 31.783 129 82 2 24 150 14 138 4.81e-13 68.9
MS.gene44831.t1 AT3G56530 27.152 151 105 3 25 173 52 199 7.20e-13 70.5

Find 175 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTATTGCTTGTTAATATT+TGG 0.124257 5.2:+58445377 MS.gene44831:CDS
GCACACTTTCCACCAGAATT+TGG 0.222116 5.2:+58444162 MS.gene44831:CDS
ATATGAACAATCGAGGATTT+TGG 0.229784 5.2:+58444955 MS.gene44831:CDS
AGTATTGCTTGTTAATATTT+GGG 0.242660 5.2:+58445378 MS.gene44831:CDS
TCCACCAGAATTTGGCTATC+AGG 0.273763 5.2:+58444170 MS.gene44831:CDS
TATTTCTTCTGGAGAGTAAT+TGG 0.283362 5.2:-58443732 None:intergenic
ATGGAAACGGTGATGAAGTT+TGG 0.293664 5.2:+58442191 MS.gene44831:CDS
AGGTCAGACTGTATTTCTTC+TGG 0.294408 5.2:-58443743 None:intergenic
TGCCGTTAGGGTTCCGCTTC+CGG 0.296315 5.2:+58442122 MS.gene44831:CDS
GTGGAAAGTGTGCATGGGCT+GGG 0.298461 5.2:-58444152 None:intergenic
TCGATGGCGGCACTGGAATT+AGG 0.299505 5.2:+58444780 MS.gene44831:CDS
CTTCCTTGTGCTTGCATCAC+CGG 0.303512 5.2:-58444845 None:intergenic
GGTGGAAAGTGTGCATGGGC+TGG 0.306967 5.2:-58444153 None:intergenic
TGAATCACTGGGTTCATGTT+TGG 0.314659 5.2:-58445031 None:intergenic
CTACCTTGTGCTTGAATCAC+TGG 0.326312 5.2:-58445043 None:intergenic
CATTTACCACAGTGGTCATT+TGG 0.343804 5.2:-58444724 None:intergenic
TTGAACCGCGCAACAACTAA+TGG 0.350476 5.2:+58443143 MS.gene44831:CDS
TGGACAGTGACACTGGTATA+AGG 0.358495 5.2:+58444975 MS.gene44831:CDS
TTGGCCTGATAGCCAAATTC+TGG 0.370776 5.2:-58444174 None:intergenic
CAGCGACTCGGATGTGGAAT+TGG 0.381724 5.2:+58444344 MS.gene44831:CDS
AACAATGAATTAATTCAGTA+TGG 0.382424 5.2:+58444195 MS.gene44831:CDS
AACAAGCGACAAAGGACATA+TGG 0.385126 5.2:-58443635 None:intergenic
ATACTGAATTAATTCATTGT+TGG 0.391012 5.2:-58444193 None:intergenic
TTTCAACTCGTGTGTTAATT+GGG 0.393985 5.2:+58444245 MS.gene44831:CDS
TGGAAACGGTGATGAAGTTT+GGG 0.404121 5.2:+58442192 MS.gene44831:CDS
CGAAGGGGACGAGGACTCAT+TGG 0.406168 5.2:+58443261 MS.gene44831:CDS
ATTGCTTCCTCAGAGTTCTC+AGG 0.411769 5.2:-58443827 None:intergenic
CTACGCTGGTCGGGCTCCGA+AGG 0.413682 5.2:+58443244 MS.gene44831:CDS
AAGTCTGGTGCTACCTTGAT+TGG 0.414025 5.2:+58443200 MS.gene44831:CDS
ACTTTCTGTTGGGCAGGGTT+CGG 0.421621 5.2:+58445278 MS.gene44831:CDS
TTCCTTGTGCTTGCATCACC+GGG 0.423967 5.2:-58444844 None:intergenic
TGCATATTCTGCCATTGTAA+TGG 0.426415 5.2:+58445348 MS.gene44831:CDS
ACTGTTGTCGATGGCGGCAC+TGG 0.435924 5.2:+58444773 MS.gene44831:CDS
TGCATCACCGGGTTCATGTC+TGG 0.438226 5.2:-58444833 None:intergenic
TATCATTAGAAAGAGTCATC+TGG 0.440631 5.2:-58444694 None:intergenic
TTAATTCAGTATGGTACAAA+CGG 0.441461 5.2:+58444204 MS.gene44831:CDS
GGAAGACCAGCTGTTAAACT+TGG 0.444270 5.2:+58444074 MS.gene44831:intron
TCACTGAACAAGCTGCCGTT+AGG 0.446779 5.2:+58442109 MS.gene44831:CDS
GTCGGGCTCCGAAGGGGACG+AGG 0.452151 5.2:+58443252 MS.gene44831:CDS
TTCGGATACTTCCGATCCAT+TGG 0.452190 5.2:-58443110 None:intergenic
TGTTTGTAAATTTGAGCCTT+GGG 0.455207 5.2:+58442231 MS.gene44831:CDS
ATATGAGCAAATGTGGAATT+CGG 0.456375 5.2:+58444748 MS.gene44831:CDS
TACAAAAGATGAGAGTTTGC+AGG 0.457897 5.2:+58445126 MS.gene44831:CDS
TCTGAGGAGACGACGGAAGA+TGG 0.460186 5.2:+58444917 MS.gene44831:CDS
CCTACCTTAAAAGAGCTTGA+TGG 0.460227 5.2:+58443302 MS.gene44831:CDS
GCATCGCTATAGCAATCAGC+TGG 0.462592 5.2:-58443866 None:intergenic
AGTCTTCTTCATTCCAATCA+AGG 0.464930 5.2:-58443213 None:intergenic
AATGGGTATTGGAAGGCAAC+AGG 0.469601 5.2:+58443161 MS.gene44831:CDS
GTCGCAACAAGCGGAGGAGC+TGG 0.476862 5.2:+58442078 MS.gene44831:CDS
ATGTTTGTAAATTTGAGCCT+TGG 0.478978 5.2:+58442230 MS.gene44831:CDS
TACGCTGGTCGGGCTCCGAA+GGG 0.481533 5.2:+58443245 MS.gene44831:CDS
TGAACCGCGCAACAACTAAT+GGG 0.482788 5.2:+58443144 MS.gene44831:CDS
TATTTAAGGATGAAGATCAA+TGG 0.483760 5.2:+58442172 MS.gene44831:CDS
AATACAGTCTGACCTAAGTC+TGG 0.484416 5.2:+58443751 MS.gene44831:CDS
AGATGAGAGTAGACCTGTCC+AGG 0.485145 5.2:-58443332 None:intergenic
CAATGAGTCCTCGTCCCCTT+CGG 0.485305 5.2:-58443260 None:intergenic
ACAGATCTCTCTTGCTGACA+TGG 0.487787 5.2:-58445212 None:intergenic
GACTCTTTCTAATGATAGCA+TGG 0.489796 5.2:+58444700 MS.gene44831:CDS
ACTCCGCAAAATAGTGATGT+AGG 0.490578 5.2:+58444653 MS.gene44831:CDS
GAGCTTGATGGCACCAACCC+TGG 0.490651 5.2:+58443314 MS.gene44831:CDS
GGGAGATGTCTTCTCTGAAT+CGG 0.491871 5.2:-58445191 None:intergenic
GCGCAACAACTAATGGGTAT+TGG 0.492493 5.2:+58443150 MS.gene44831:CDS
CACTGAACAAGCTGCCGTTA+GGG 0.492570 5.2:+58442110 MS.gene44831:CDS
TTGTAGATTTATCGATCGTA+AGG 0.496524 5.2:+58443057 MS.gene44831:intron
ACGATTTGAGCTTGAGCCAT+GGG 0.499250 5.2:+58444113 MS.gene44831:CDS
TTTGAGCCTTGGGATTTGCC+TGG 0.499957 5.2:+58442241 MS.gene44831:CDS
AAGACTGATAGACGCCTCAC+TGG 0.500018 5.2:-58444277 None:intergenic
CCTCATCGGTAGGCCGGAAG+CGG 0.502257 5.2:-58442135 None:intergenic
CGGTTCAATCTGCTCCCATT+CGG 0.502927 5.2:-58443128 None:intergenic
GAAGGGGACGAGGACTCATT+GGG 0.503369 5.2:+58443262 MS.gene44831:CDS
TACAACTGCAGAATCCAACT+TGG 0.503596 5.2:+58445246 MS.gene44831:CDS
CTGAGGAGACGACGGAAGAT+GGG 0.508026 5.2:+58444918 MS.gene44831:CDS
GCTGTTACTAACCATCATAT+TGG 0.508994 5.2:-58444367 None:intergenic
TGCACCAAGGAGAATACGAT+TGG 0.510811 5.2:+58444868 MS.gene44831:CDS
CAAGCTCCTCATCGGTAGGC+CGG 0.510970 5.2:-58442141 None:intergenic
AAAGATCGAAGGATCAAGTC+TGG 0.512532 5.2:+58443185 MS.gene44831:CDS
AGATGAGAGTTTGCAGGAGA+CGG 0.513317 5.2:+58445132 MS.gene44831:CDS
ACAAGCGACAAAGGACATAT+GGG 0.513337 5.2:-58443634 None:intergenic
TGATGGCACCAACCCTGGAC+AGG 0.515668 5.2:+58443319 MS.gene44831:CDS
GTCGTGCAGCGACTCGGATG+TGG 0.517472 5.2:+58444338 MS.gene44831:CDS
CCGTCGTCTCCTCAGAAACA+AGG 0.519813 5.2:-58444910 None:intergenic
CCTCCCAATCGTATTCTCCT+TGG 0.520034 5.2:-58444872 None:intergenic
CAAGCATTCCCTTGTTTCCG+AGG 0.521043 5.2:+58445099 MS.gene44831:CDS
GTGACACTGGTATAAGGATA+AGG 0.523174 5.2:+58444981 MS.gene44831:CDS
TACCTTGTGCTTGAATCACT+GGG 0.526925 5.2:-58445042 None:intergenic
TAATTCAGTATGGTACAAAC+GGG 0.529323 5.2:+58444205 MS.gene44831:CDS
TTGTAGTCTCCTCGGAAACA+AGG 0.529566 5.2:-58445108 None:intergenic
TGCGCGTTCCCTTGTTTCTG+AGG 0.529631 5.2:+58444901 MS.gene44831:CDS
CACGATTTGAGCTTGAGCCA+TGG 0.532975 5.2:+58444112 MS.gene44831:CDS
ATATGTCCAAGTTTAACAGC+TGG 0.536412 5.2:-58444080 None:intergenic
ACGCTGGTCGGGCTCCGAAG+GGG 0.537215 5.2:+58443246 MS.gene44831:CDS
TGGAAAGTGTGCATGGGCTG+GGG 0.538723 5.2:-58444151 None:intergenic
GCCCCGCGTAGAATACGATT+AGG 0.540078 5.2:+58445067 MS.gene44831:CDS
TTTAGAAGTACCGGCTGCAG+AGG 0.540263 5.2:+58443919 MS.gene44831:CDS
GTCGCTAGTGAGGAAGATAC+AGG 0.541800 5.2:-58443776 None:intergenic
ATCATTAGAAAGAGTCATCT+GGG 0.542441 5.2:-58444693 None:intergenic
GCGGCACTGGAATTAGGATA+AGG 0.543075 5.2:+58444786 MS.gene44831:CDS
GTATTGCTTGTTAATATTTG+GGG 0.547201 5.2:+58445379 MS.gene44831:CDS
ACATCAGAGTTTAGAAGTAC+CGG 0.554540 5.2:+58443910 MS.gene44831:CDS
TAAATGAATATGAGCAAATG+TGG 0.557259 5.2:+58444741 MS.gene44831:CDS
TTGCTTCCTCAGAGTTCTCA+GGG 0.559559 5.2:-58443826 None:intergenic
AAGATACAGGAACCAGACTT+AGG 0.561854 5.2:-58443763 None:intergenic
CTCCTAATCGTATTCTACGC+GGG 0.566860 5.2:-58445069 None:intergenic
AAATGGGTCGTGCAGCGACT+CGG 0.567183 5.2:+58444332 MS.gene44831:CDS
AGTTCTCAGGGATAGCTGCT+AGG 0.567787 5.2:-58443814 None:intergenic
AGGATGAAGATCAATGGAAA+CGG 0.569002 5.2:+58442178 MS.gene44831:CDS
GAGAATAACTTATCATCCCA+TGG 0.570032 5.2:-58444129 None:intergenic
ACAACTGCAGAATCCAACTT+GGG 0.570272 5.2:+58445247 MS.gene44831:CDS
ACTCTTTCTAATGATAGCAT+GGG 0.570861 5.2:+58444701 MS.gene44831:CDS
AGAGTAGACCTGTCCAGGGT+TGG 0.572395 5.2:-58443327 None:intergenic
TTCATCTTCTGTCGCTAGTG+AGG 0.575075 5.2:-58443786 None:intergenic
GGCCGGAAGCGGAACCCTAA+CGG 0.575633 5.2:-58442124 None:intergenic
TGGATCGGAAGTATCCGAAT+GGG 0.576646 5.2:+58443114 MS.gene44831:CDS
GCTTCTTAAACAAGCGACAA+AGG 0.577150 5.2:-58443643 None:intergenic
CAGATCTCTCTTGCTGACAT+GGG 0.580999 5.2:-58445211 None:intergenic
AAAATCAACAAGCTCCTCAT+CGG 0.582727 5.2:-58442149 None:intergenic
CATCGCTATAGCAATCAGCT+GGG 0.583887 5.2:-58443865 None:intergenic
CAGCACTCTCAGCAGCAGCA+TGG 0.584530 5.2:-58445168 None:intergenic
TGTGGAATTGGCCAATATGA+TGG 0.586555 5.2:+58444356 MS.gene44831:CDS
TCCTCCGCTTGTTGCGACGA+CGG 0.588388 5.2:-58442073 None:intergenic
GCCCATCTTACCTCTGCAGC+CGG 0.589631 5.2:-58443929 None:intergenic
TCGGATACTGTTGTCGATGG+CGG 0.589834 5.2:+58444767 MS.gene44831:CDS
CACTAGCGACAGAAGATGAA+AGG 0.590698 5.2:+58443789 MS.gene44831:CDS
CTCCGCAAAATAGTGATGTA+GGG 0.592820 5.2:+58444654 MS.gene44831:CDS
GCCTGATAGCCAAATTCTGG+TGG 0.593697 5.2:-58444171 None:intergenic
GCACCAAGGAGAATACGATT+GGG 0.595669 5.2:+58444869 MS.gene44831:CDS
AACAACTAATGGGTATTGGA+AGG 0.596221 5.2:+58443154 MS.gene44831:CDS
ATTCTGGTGGAAAGTGTGCA+TGG 0.598446 5.2:-58444158 None:intergenic
AACCCGGTGATGCAAGCACA+AGG 0.605040 5.2:+58444842 MS.gene44831:CDS
GATGAGAGTAGACCTGTCCA+GGG 0.605085 5.2:-58443331 None:intergenic
TTCTTACCAGGCAAATCCCA+AGG 0.611213 5.2:-58442247 None:intergenic
TTCTGGTGGAAAGTGTGCAT+GGG 0.611417 5.2:-58444157 None:intergenic
CCGCTTCCGGCCTACCGATG+AGG 0.611927 5.2:+58442135 MS.gene44831:CDS
TCAACAAGCTCCTCATCGGT+AGG 0.614092 5.2:-58442145 None:intergenic
TTTATCGATCGTAAGGAACA+AGG 0.615540 5.2:+58443064 MS.gene44831:CDS
AATTCGGATACTGTTGTCGA+TGG 0.617050 5.2:+58444764 MS.gene44831:CDS
TGTAGTCTCCTCGGAAACAA+GGG 0.617655 5.2:-58445107 None:intergenic
CCTTGTTTCTGAGGAGACGA+CGG 0.620782 5.2:+58444910 MS.gene44831:CDS
ATGGCTCAAGCTCAAATCGT+GGG 0.621257 5.2:-58444110 None:intergenic
ATGGATCGGAAGTATCCGAA+TGG 0.622532 5.2:+58443113 MS.gene44831:CDS
CCGCGTAGAATACGATTAGG+AGG 0.622604 5.2:+58445070 MS.gene44831:CDS
AAGTTCAAACTGTGGTGAAG+CGG 0.625096 5.2:+58443682 MS.gene44831:CDS
AATACCCATTAGTTGTTGCG+CGG 0.626523 5.2:-58443148 None:intergenic
GCATCACATGATTATCCAGA+GGG 0.629292 5.2:+58444626 MS.gene44831:CDS
CATGGCTCAAGCTCAAATCG+TGG 0.630025 5.2:-58444111 None:intergenic
GCAACAAGCGGAGGAGCTGG+CGG 0.630298 5.2:+58442081 MS.gene44831:CDS
TTTACCGTCGTCGCAACAAG+CGG 0.632140 5.2:+58442069 MS.gene44831:CDS
CTCATATTCATTTACCACAG+TGG 0.633818 5.2:-58444732 None:intergenic
AGGCAACAGGAAAAGATCGA+AGG 0.636903 5.2:+58443174 MS.gene44831:CDS
TCCTAATCGTATTCTACGCG+GGG 0.637438 5.2:-58445068 None:intergenic
ATCAGCTGGGGTTATAACGT+GGG 0.641971 5.2:-58443852 None:intergenic
CATCAGAATATGAACAATCG+AGG 0.642537 5.2:+58444948 MS.gene44831:CDS
GGAGAGTAATTGGCAGTCGT+AGG 0.642617 5.2:-58443722 None:intergenic
CGACGGTAAACACTCAACTA+CGG 0.643070 5.2:-58442056 None:intergenic
AATCAGCTGGGGTTATAACG+TGG 0.648862 5.2:-58443853 None:intergenic
AGACCGCATAGCGCTAATCG+AGG 0.650251 5.2:-58445317 None:intergenic
CCAAGGAGAATACGATTGGG+AGG 0.651383 5.2:+58444872 MS.gene44831:CDS
CGTCGTCTCCTCAGAAACAA+GGG 0.652580 5.2:-58444909 None:intergenic
ACCGTCGTCGCAACAAGCGG+AGG 0.653126 5.2:+58442072 MS.gene44831:CDS
CATCCTCGATTAGCGCTATG+CGG 0.659213 5.2:+58445314 MS.gene44831:CDS
TACTAGCGAGACCATTACAA+TGG 0.671283 5.2:-58445359 None:intergenic
TGAACAACCAGACATGAACC+CGG 0.672019 5.2:+58444826 MS.gene44831:CDS
ACACTGGTATAAGGATAAGG+AGG 0.673680 5.2:+58444984 MS.gene44831:CDS
AGCATCACATGATTATCCAG+AGG 0.675169 5.2:+58444625 MS.gene44831:CDS
AACCCAGTGATTCAAGCACA+AGG 0.683254 5.2:+58445040 MS.gene44831:CDS
CCTCCTAATCGTATTCTACG+CGG 0.684086 5.2:-58445070 None:intergenic
CAACTGCAGAATCCAACTTG+GGG 0.705558 5.2:+58445248 MS.gene44831:CDS
TTGGGACGAGTTCTCCAGTG+AGG 0.712013 5.2:+58444263 MS.gene44831:CDS
ATCGCTATAGCAATCAGCTG+GGG 0.717192 5.2:-58443864 None:intergenic
AGCTATCCCTGAGAACTCTG+AGG 0.720586 5.2:+58443820 MS.gene44831:CDS
ATTAGGATAAGGTCTAGACA+AGG 0.726784 5.2:+58444797 MS.gene44831:CDS
AAGCACAAGGAAGTGCACCA+AGG 0.746045 5.2:+58444855 MS.gene44831:CDS
TAAGGAACAAGGATCCAGAG+TGG 0.758355 5.2:+58443075 MS.gene44831:CDS
AGTCTTGCAAGTTCAAACTG+TGG 0.773510 5.2:+58443674 MS.gene44831:CDS
CATGGGCCAAATGACCACTG+TGG 0.787507 5.2:+58444718 MS.gene44831:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTATTGTATATATGT+CGG + chr5.2:58444534-58444553 MS.gene44831:intron 10.0%
!! AAAAAAAAAAAATTCTTACC+AGG - chr5.2:58442262-58442281 None:intergenic 15.0%
!! AAACATAAAATAAAAAAGAG+AGG - chr5.2:58443358-58443377 None:intergenic 15.0%
!! ATAATTATCTATAATTGCTT+AGG - chr5.2:58443572-58443591 None:intergenic 15.0%
!! ATACAATAAAATTTGTGTTA+AGG - chr5.2:58444528-58444547 None:intergenic 15.0%
!! TCATTCAAATAAAACATTAA+AGG - chr5.2:58443987-58444006 None:intergenic 15.0%
!! TTGATATGTAAATTTATAAG+TGG + chr5.2:58442395-58442414 MS.gene44831:intron 15.0%
!!! AAAATGTTTTGTTGAAAATT+AGG + chr5.2:58442626-58442645 MS.gene44831:intron 15.0%
!!! AAATGTTTTGTTGAAAATTA+GGG + chr5.2:58442627-58442646 MS.gene44831:intron 15.0%
!!! ATTAGTTTTGTTGAAAATTA+GGG + chr5.2:58442603-58442622 MS.gene44831:intron 15.0%
!!! ATTTTCTGGAATTTTAAAAA+TGG - chr5.2:58444316-58444335 None:intergenic 15.0%
!!! ATTTTTAAAATTCCAGAAAA+TGG + chr5.2:58444315-58444334 MS.gene44831:CDS 15.0%
!!! GGAAATTTTTTGATTTTTAA+TGG + chr5.2:58442490-58442509 MS.gene44831:intron 15.0%
!!! TCTCTTTTTTATTTTATGTT+TGG + chr5.2:58443357-58443376 MS.gene44831:intron 15.0%
!!! TTTAATTGTTTCTTGAATTT+AGG + chr5.2:58442289-58442308 MS.gene44831:intron 15.0%
!!! TTTTTAAAATTCCAGAAAAT+GGG + chr5.2:58444316-58444335 MS.gene44831:CDS 15.0%
!! AACAATGAATTAATTCAGTA+TGG + chr5.2:58444195-58444214 MS.gene44831:CDS 20.0%
!! AATGACCAAAAAAAAAAAAG+GGG - chr5.2:58444398-58444417 None:intergenic 20.0%
!! AGAATGACCAAAAAAAAAAA+AGG - chr5.2:58444400-58444419 None:intergenic 20.0%
!! ATACTGAATTAATTCATTGT+TGG - chr5.2:58444196-58444215 None:intergenic 20.0%
!! GAATGACCAAAAAAAAAAAA+GGG - chr5.2:58444399-58444418 None:intergenic 20.0%
!!! AGCTTGTTGATTTTTATTTA+AGG + chr5.2:58442158-58442177 MS.gene44831:CDS 20.0%
!!! AGTATTGCTTGTTAATATTT+GGG + chr5.2:58445378-58445397 MS.gene44831:CDS 20.0%
!!! CATTAGTTTTGTTGAAAATT+AGG + chr5.2:58442602-58442621 MS.gene44831:intron 20.0%
!!! GAATGAGTTTTTTTTTTCTA+TGG + chr5.2:58442469-58442488 MS.gene44831:intron 20.0%
!!! TAGTATTGCTTGTTAATATT+TGG + chr5.2:58445377-58445396 MS.gene44831:CDS 20.0%
!!! TGATTTTTAATGGTTAAATG+TGG + chr5.2:58442500-58442519 MS.gene44831:intron 20.0%
!!! TTGATGATTTTATTGATGAT+GGG + chr5.2:58442537-58442556 MS.gene44831:intron 20.0%
!!! TTGTGAGAATTAATTTTGAA+TGG + chr5.2:58442935-58442954 MS.gene44831:intron 20.0%
!!! TTTGATGATTTTATTGATGA+TGG + chr5.2:58442536-58442555 MS.gene44831:intron 20.0%
!!! TTTTTGTTCTTTTGATGATT+TGG + chr5.2:58442312-58442331 MS.gene44831:intron 20.0%
! ATTAGTCAAGGACAAAATAA+AGG - chr5.2:58443524-58443543 None:intergenic 25.0%
! TAAATGAATATGAGCAAATG+TGG + chr5.2:58444741-58444760 MS.gene44831:CDS 25.0%
! TAGGGAAAATTAATCTTGAA+TGG + chr5.2:58442645-58442664 MS.gene44831:intron 25.0%
! TATTTAAGGATGAAGATCAA+TGG + chr5.2:58442172-58442191 MS.gene44831:CDS 25.0%
! TCAGATTTAAATTATACCCA+TGG - chr5.2:58444584-58444603 None:intergenic 25.0%
! TTAAGAACATTAACAGGAAA+AGG - chr5.2:58444481-58444500 None:intergenic 25.0%
! TTAATTCAGTATGGTACAAA+CGG + chr5.2:58444204-58444223 MS.gene44831:CDS 25.0%
!! AGTTATGTTTTCTAATACCA+TGG + chr5.2:58444564-58444583 MS.gene44831:intron 25.0%
!! ATTAGCTTAAGAACATTAAC+AGG - chr5.2:58444487-58444506 None:intergenic 25.0%
!! GTATTGCTTGTTAATATTTG+GGG + chr5.2:58445379-58445398 MS.gene44831:CDS 25.0%
!! GTTATGTTTTCTAATACCAT+GGG + chr5.2:58444565-58444584 MS.gene44831:intron 25.0%
!!! ACACTAATTTTGGTGAAATT+TGG + chr5.2:58442757-58442776 MS.gene44831:intron 25.0%
!!! ACTAATTTTGGTGAAATTTG+GGG + chr5.2:58442759-58442778 MS.gene44831:intron 25.0%
!!! CACTAATTTTGGTGAAATTT+GGG + chr5.2:58442758-58442777 MS.gene44831:intron 25.0%
!!! CTGGAATTTTAAAAATGGTT+GGG - chr5.2:58444311-58444330 None:intergenic 25.0%
!!! TCATGATTTTTGTTGATGAT+GGG + chr5.2:58443016-58443035 MS.gene44831:intron 25.0%
!!! TCTGGAATTTTAAAAATGGT+TGG - chr5.2:58444312-58444331 None:intergenic 25.0%
!!! TTCATGATTTTGATGATGAT+GGG + chr5.2:58442862-58442881 MS.gene44831:intron 25.0%
!!! TTCATGATTTTTGTTGATGA+TGG + chr5.2:58443015-58443034 MS.gene44831:intron 25.0%
!!! TTTCATGATTTTGATGATGA+TGG + chr5.2:58442861-58442880 MS.gene44831:intron 25.0%
ACTAACAAATTGCATTCTGA+TGG - chr5.2:58444432-58444451 None:intergenic 30.0%
ACTCTTTCTAATGATAGCAT+GGG + chr5.2:58444701-58444720 MS.gene44831:CDS 30.0%
AGTGACTTCAAATCAATAGA+AGG - chr5.2:58444011-58444030 None:intergenic 30.0%
ATATGAGCAAATGTGGAATT+CGG + chr5.2:58444748-58444767 MS.gene44831:CDS 30.0%
ATCATTAGAAAGAGTCATCT+GGG - chr5.2:58444696-58444715 None:intergenic 30.0%
ATGTTTGTAAATTTGAGCCT+TGG + chr5.2:58442230-58442249 MS.gene44831:CDS 30.0%
GAAGTGCGTTGAAAAAATTA+TGG - chr5.2:58443476-58443495 None:intergenic 30.0%
TAATTCAGTATGGTACAAAC+GGG + chr5.2:58444205-58444224 MS.gene44831:CDS 30.0%
TACTTGATGCTAACTATTTC+AGG + chr5.2:58444053-58444072 MS.gene44831:intron 30.0%
TATCATTAGAAAGAGTCATC+TGG - chr5.2:58444697-58444716 None:intergenic 30.0%
TGTTTGTAAATTTGAGCCTT+GGG + chr5.2:58442231-58442250 MS.gene44831:CDS 30.0%
TTGTAGATTTATCGATCGTA+AGG + chr5.2:58443057-58443076 MS.gene44831:intron 30.0%
TTTCAACTCGTGTGTTAATT+GGG + chr5.2:58444245-58444264 MS.gene44831:CDS 30.0%
! AAGGACAAAATAAAGGTACA+CGG - chr5.2:58443517-58443536 None:intergenic 30.0%
! ATATGAACAATCGAGGATTT+TGG + chr5.2:58444955-58444974 MS.gene44831:CDS 30.0%
! ATGTTTCTAACTTCTCAACA+TGG + chr5.2:58443590-58443609 MS.gene44831:intron 30.0%
! GAATTTTGTTGCAGGTTTAA+CGG + chr5.2:58442569-58442588 MS.gene44831:intron 30.0%
! TATTTCTTCTGGAGAGTAAT+TGG - chr5.2:58443735-58443754 None:intergenic 30.0%
! TGGGGGAAATTAATTTTGTA+TGG + chr5.2:58442777-58442796 MS.gene44831:intron 30.0%
! TTTCATGGTTTTCTTGATGA+TGG + chr5.2:58442704-58442723 MS.gene44831:intron 30.0%
! TTTTCAACTCGTGTGTTAAT+TGG + chr5.2:58444244-58444263 MS.gene44831:CDS 30.0%
! TTTTGAATGGTTAGATCATG+CGG + chr5.2:58442948-58442967 MS.gene44831:intron 30.0%
! TTTTGTATGGTTAGATCATG+TGG + chr5.2:58442790-58442809 MS.gene44831:intron 30.0%
!! CTAATTTTGGTGAAATTTGG+GGG + chr5.2:58442760-58442779 MS.gene44831:intron 30.0%
!! TTCATGGTTTTCTTGATGAT+GGG + chr5.2:58442705-58442724 MS.gene44831:intron 30.0%
!! TTTATTGATGATGGGTTTGT+GGG + chr5.2:58442545-58442564 MS.gene44831:intron 30.0%
!!! CATGATTTTTGTTGATGATG+GGG + chr5.2:58443017-58443036 MS.gene44831:intron 30.0%
!!! GTGGTTTTGAACACTAATTT+TGG + chr5.2:58442747-58442766 MS.gene44831:intron 30.0%
!!! TCATGATTTTGATGATGATG+GGG + chr5.2:58442863-58442882 MS.gene44831:intron 30.0%
!!! TCTGACCCCTTTTTTTTTTT+TGG + chr5.2:58444390-58444409 MS.gene44831:intron 30.0%
!!! TTTTATTGATGATGGGTTTG+TGG + chr5.2:58442544-58442563 MS.gene44831:intron 30.0%
AAAATCAACAAGCTCCTCAT+CGG - chr5.2:58442152-58442171 None:intergenic 35.0%
AGGATGAAGATCAATGGAAA+CGG + chr5.2:58442178-58442197 MS.gene44831:CDS 35.0%
AGTCTTCTTCATTCCAATCA+AGG - chr5.2:58443216-58443235 None:intergenic 35.0%
ATATGTCCAAGTTTAACAGC+TGG - chr5.2:58444083-58444102 None:intergenic 35.0%
ATTAGGATAAGGTCTAGACA+AGG + chr5.2:58444797-58444816 MS.gene44831:CDS 35.0%
CATCAGAATATGAACAATCG+AGG + chr5.2:58444948-58444967 MS.gene44831:CDS 35.0%
CTCATATTCATTTACCACAG+TGG - chr5.2:58444735-58444754 None:intergenic 35.0%
GACTCTTTCTAATGATAGCA+TGG + chr5.2:58444700-58444719 MS.gene44831:CDS 35.0%
GAGAATAACTTATCATCCCA+TGG - chr5.2:58444132-58444151 None:intergenic 35.0%
GCTGTTACTAACCATCATAT+TGG - chr5.2:58444370-58444389 None:intergenic 35.0%
TACAAAAGATGAGAGTTTGC+AGG + chr5.2:58445126-58445145 MS.gene44831:CDS 35.0%
TGCATATTCTGCCATTGTAA+TGG + chr5.2:58445348-58445367 MS.gene44831:CDS 35.0%
TTTATCGATCGTAAGGAACA+AGG + chr5.2:58443064-58443083 MS.gene44831:CDS 35.0%
TTTGTCGATCGAAGATTTCA+TGG + chr5.2:58442689-58442708 MS.gene44831:intron 35.0%
! AACCCTACATCACTATTTTG+CGG - chr5.2:58444659-58444678 None:intergenic 35.0%
! ACATCAGAGTTTAGAAGTAC+CGG + chr5.2:58443910-58443929 MS.gene44831:CDS 35.0%
! CAGTAGCTTTACATTAGTCA+AGG - chr5.2:58443536-58443555 None:intergenic 35.0%
! GTTAAGGTGTCAATTAGAGA+AGG - chr5.2:58444512-58444531 None:intergenic 35.0%
! GTTAGTTTCAGAACACATAG+CGG + chr5.2:58444446-58444465 MS.gene44831:intron 35.0%
! TGACTTTGAGTTAATGATGC+TGG + chr5.2:58443410-58443429 MS.gene44831:intron 35.0%
! TTTTCTTCTGTCCAATGGAT+CGG + chr5.2:58443099-58443118 MS.gene44831:CDS 35.0%
!! AACAACTAATGGGTATTGGA+AGG + chr5.2:58443154-58443173 MS.gene44831:CDS 35.0%
!! GTTCTTTTGATGATTTGGAC+TGG + chr5.2:58442317-58442336 MS.gene44831:intron 35.0%
!!! GATTTGGACTGGTTTTGATT+TGG + chr5.2:58442328-58442347 MS.gene44831:intron 35.0%
!!! TCATGGTTTTCTTGATGATG+GGG + chr5.2:58442706-58442725 MS.gene44831:intron 35.0%
AAAGATCGAAGGATCAAGTC+TGG + chr5.2:58443185-58443204 MS.gene44831:CDS 40.0%
AACAAGCGACAAAGGACATA+TGG - chr5.2:58443638-58443657 None:intergenic 40.0%
AAGATACAGGAACCAGACTT+AGG - chr5.2:58443766-58443785 None:intergenic 40.0%
AAGTTCAAACTGTGGTGAAG+CGG + chr5.2:58443682-58443701 MS.gene44831:CDS 40.0%
AATACAGTCTGACCTAAGTC+TGG + chr5.2:58443751-58443770 MS.gene44831:CDS 40.0%
AATACCCATTAGTTGTTGCG+CGG - chr5.2:58443151-58443170 None:intergenic 40.0%
AATTCGGATACTGTTGTCGA+TGG + chr5.2:58444764-58444783 MS.gene44831:CDS 40.0%
ACAACTGCAGAATCCAACTT+GGG + chr5.2:58445247-58445266 MS.gene44831:CDS 40.0%
ACAAGCGACAAAGGACATAT+GGG - chr5.2:58443637-58443656 None:intergenic 40.0%
ACACTGGTATAAGGATAAGG+AGG + chr5.2:58444984-58445003 MS.gene44831:CDS 40.0%
ACTCCGCAAAATAGTGATGT+AGG + chr5.2:58444653-58444672 MS.gene44831:CDS 40.0%
AGCATCACATGATTATCCAG+AGG + chr5.2:58444625-58444644 MS.gene44831:CDS 40.0%
AGGTCAGACTGTATTTCTTC+TGG - chr5.2:58443746-58443765 None:intergenic 40.0%
AGTCTTGCAAGTTCAAACTG+TGG + chr5.2:58443674-58443693 MS.gene44831:CDS 40.0%
ATGGAAACGGTGATGAAGTT+TGG + chr5.2:58442191-58442210 MS.gene44831:CDS 40.0%
ATGGTTAGATCATGCGGTTA+TGG + chr5.2:58442954-58442973 MS.gene44831:intron 40.0%
ATGGTTAGATCATGTGGTTG+TGG + chr5.2:58442796-58442815 MS.gene44831:intron 40.0%
CATTTACCACAGTGGTCATT+TGG - chr5.2:58444727-58444746 None:intergenic 40.0%
CCTACCTTAAAAGAGCTTGA+TGG + chr5.2:58443302-58443321 MS.gene44831:CDS 40.0%
CTCCGCAAAATAGTGATGTA+GGG + chr5.2:58444654-58444673 MS.gene44831:CDS 40.0%
GAAAAACTTTCTGTTGGGCA+GGG + chr5.2:58445273-58445292 MS.gene44831:CDS 40.0%
GCATCACATGATTATCCAGA+GGG + chr5.2:58444626-58444645 MS.gene44831:CDS 40.0%
GCTTCTTAAACAAGCGACAA+AGG - chr5.2:58443646-58443665 None:intergenic 40.0%
GGGTCGAAAAACTTTCTGTT+GGG + chr5.2:58445268-58445287 MS.gene44831:CDS 40.0%
GTGACACTGGTATAAGGATA+AGG + chr5.2:58444981-58445000 MS.gene44831:CDS 40.0%
TACAACTGCAGAATCCAACT+TGG + chr5.2:58445246-58445265 MS.gene44831:CDS 40.0%
TACCTTGTGCTTGAATCACT+GGG - chr5.2:58445045-58445064 None:intergenic 40.0%
TACTAGCGAGACCATTACAA+TGG - chr5.2:58445362-58445381 None:intergenic 40.0%
TGAATCACTGGGTTCATGTT+TGG - chr5.2:58445034-58445053 None:intergenic 40.0%
TGGAAACGGTGATGAAGTTT+GGG + chr5.2:58442192-58442211 MS.gene44831:CDS 40.0%
TGTGGAATTGGCCAATATGA+TGG + chr5.2:58444356-58444375 MS.gene44831:CDS 40.0%
! AATAAAGGTACACGGAGTTG+TGG - chr5.2:58443509-58443528 None:intergenic 40.0%
! CTCATCTTTTGTAGTCTCCT+CGG - chr5.2:58445119-58445138 None:intergenic 40.0%
! GTGGTTTTTCTTCTGTCCAA+TGG + chr5.2:58443094-58443113 MS.gene44831:CDS 40.0%
! TTGTGGGTGAATTTTGTTGC+AGG + chr5.2:58442561-58442580 MS.gene44831:intron 40.0%
! TTTTGTTGCAGGTTTAACGG+TGG + chr5.2:58442572-58442591 MS.gene44831:intron 40.0%
!! AAAGTTTTTCGACCCCAAGT+TGG - chr5.2:58445263-58445282 None:intergenic 40.0%
!! TTTGATGATGATGGGGTTTG+TGG + chr5.2:58442870-58442889 MS.gene44831:intron 40.0%
!!! AAGACTCTTGTTTTCTACGC+TGG + chr5.2:58443230-58443249 MS.gene44831:CDS 40.0%
!!! CCATCAAGCTCTTTTAAGGT+AGG - chr5.2:58443305-58443324 None:intergenic 40.0%
AACCCAGTGATTCAAGCACA+AGG + chr5.2:58445040-58445059 MS.gene44831:CDS 45.0%
AATCAGCTGGGGTTATAACG+TGG - chr5.2:58443856-58443875 None:intergenic 45.0%
ACAGATCTCTCTTGCTGACA+TGG - chr5.2:58445215-58445234 None:intergenic 45.0%
ACGATTTGAGCTTGAGCCAT+GGG + chr5.2:58444113-58444132 MS.gene44831:CDS 45.0%
AGATGAGAGTTTGCAGGAGA+CGG + chr5.2:58445132-58445151 MS.gene44831:CDS 45.0%
AGGCAACAGGAAAAGATCGA+AGG + chr5.2:58443174-58443193 MS.gene44831:CDS 45.0%
ATCAGCTGGGGTTATAACGT+GGG - chr5.2:58443855-58443874 None:intergenic 45.0%
ATCGCTATAGCAATCAGCTG+GGG - chr5.2:58443867-58443886 None:intergenic 45.0%
ATGGCTCAAGCTCAAATCGT+GGG - chr5.2:58444113-58444132 None:intergenic 45.0%
ATTGCTTCCTCAGAGTTCTC+AGG - chr5.2:58443830-58443849 None:intergenic 45.0%
CAACTGCAGAATCCAACTTG+GGG + chr5.2:58445248-58445267 MS.gene44831:CDS 45.0%
CACTAGCGACAGAAGATGAA+AGG + chr5.2:58443789-58443808 MS.gene44831:CDS 45.0%
CAGATCTCTCTTGCTGACAT+GGG - chr5.2:58445214-58445233 None:intergenic 45.0%
CATCGCTATAGCAATCAGCT+GGG - chr5.2:58443868-58443887 None:intergenic 45.0%
CCTCCTAATCGTATTCTACG+CGG - chr5.2:58445073-58445092 None:intergenic 45.0%
CGAAAAACTTTCTGTTGGGC+AGG + chr5.2:58445272-58445291 MS.gene44831:CDS 45.0%
CGACGGTAAACACTCAACTA+CGG - chr5.2:58442059-58442078 None:intergenic 45.0%
CTACCTTGTGCTTGAATCAC+TGG - chr5.2:58445046-58445065 None:intergenic 45.0%
CTCCTAATCGTATTCTACGC+GGG - chr5.2:58445072-58445091 None:intergenic 45.0%
GACAAAGGACATATGGGTTC+TGG - chr5.2:58443631-58443650 None:intergenic 45.0%
GCACACTTTCCACCAGAATT+TGG + chr5.2:58444162-58444181 MS.gene44831:CDS 45.0%
GCACCAAGGAGAATACGATT+GGG + chr5.2:58444869-58444888 MS.gene44831:CDS 45.0%
GGAAGACCAGCTGTTAAACT+TGG + chr5.2:58444074-58444093 MS.gene44831:intron 45.0%
GGACAGAAGAAAAACCACTC+TGG - chr5.2:58443092-58443111 None:intergenic 45.0%
GGGAGATGTCTTCTCTGAAT+CGG - chr5.2:58445194-58445213 None:intergenic 45.0%
GGGGTCGAAAAACTTTCTGT+TGG + chr5.2:58445267-58445286 MS.gene44831:CDS 45.0%
TAAGGAACAAGGATCCAGAG+TGG + chr5.2:58443075-58443094 MS.gene44831:CDS 45.0%
TCCACCAGAATTTGGCTATC+AGG + chr5.2:58444170-58444189 MS.gene44831:CDS 45.0%
TCCTAATCGTATTCTACGCG+GGG - chr5.2:58445071-58445090 None:intergenic 45.0%
TGAACAACCAGACATGAACC+CGG + chr5.2:58444826-58444845 MS.gene44831:CDS 45.0%
TGAACCGCGCAACAACTAAT+GGG + chr5.2:58443144-58443163 MS.gene44831:CDS 45.0%
TGCACCAAGGAGAATACGAT+TGG + chr5.2:58444868-58444887 MS.gene44831:CDS 45.0%
TGGACAGTGACACTGGTATA+AGG + chr5.2:58444975-58444994 MS.gene44831:CDS 45.0%
TGTAGTCTCCTCGGAAACAA+GGG - chr5.2:58445110-58445129 None:intergenic 45.0%
TTCATCTTCTGTCGCTAGTG+AGG - chr5.2:58443789-58443808 None:intergenic 45.0%
TTCGGATACTTCCGATCCAT+TGG - chr5.2:58443113-58443132 None:intergenic 45.0%
TTCTTACCAGGCAAATCCCA+AGG - chr5.2:58442250-58442269 None:intergenic 45.0%
TTGAACCGCGCAACAACTAA+TGG + chr5.2:58443143-58443162 MS.gene44831:CDS 45.0%
TTGCTTCCTCAGAGTTCTCA+GGG - chr5.2:58443829-58443848 None:intergenic 45.0%
TTGGCCTGATAGCCAAATTC+TGG - chr5.2:58444177-58444196 None:intergenic 45.0%
TTGTAGTCTCCTCGGAAACA+AGG - chr5.2:58445111-58445130 None:intergenic 45.0%
! AGGATTTTGGACAGTGACAC+TGG + chr5.2:58444968-58444987 MS.gene44831:CDS 45.0%
! ATTCTGGTGGAAAGTGTGCA+TGG - chr5.2:58444161-58444180 None:intergenic 45.0%
! GCGCAACAACTAATGGGTAT+TGG + chr5.2:58443150-58443169 MS.gene44831:CDS 45.0%
! TTCTGGTGGAAAGTGTGCAT+GGG - chr5.2:58444160-58444179 None:intergenic 45.0%
!! AAGTCTGGTGCTACCTTGAT+TGG + chr5.2:58443200-58443219 MS.gene44831:CDS 45.0%
!! AATGGGTATTGGAAGGCAAC+AGG + chr5.2:58443161-58443180 MS.gene44831:CDS 45.0%
!! ATGGATCGGAAGTATCCGAA+TGG + chr5.2:58443113-58443132 MS.gene44831:CDS 45.0%
!! GCTTGTTGTAGGTTTATCGG+TGG + chr5.2:58442728-58442747 MS.gene44831:intron 45.0%
!! GGGGCTTGTTGTAGGTTTAT+CGG + chr5.2:58442725-58442744 MS.gene44831:intron 45.0%
!! GGTGCCATCAAGCTCTTTTA+AGG - chr5.2:58443309-58443328 None:intergenic 45.0%
!! TGGATCGGAAGTATCCGAAT+GGG + chr5.2:58443114-58443133 MS.gene44831:CDS 45.0%
!! TTGATGATGGGGCTTGTTGT+AGG + chr5.2:58442717-58442736 MS.gene44831:intron 45.0%
!!! CTCTTGTTTTCTACGCTGGT+CGG + chr5.2:58443234-58443253 MS.gene44831:CDS 45.0%
!!! TCTTGTTTTCTACGCTGGTC+GGG + chr5.2:58443235-58443254 MS.gene44831:CDS 45.0%
AAGACTGATAGACGCCTCAC+TGG - chr5.2:58444280-58444299 None:intergenic 50.0%
ACTTTCTGTTGGGCAGGGTT+CGG + chr5.2:58445278-58445297 MS.gene44831:CDS 50.0%
AGATGAGAGTAGACCTGTCC+AGG - chr5.2:58443335-58443354 None:intergenic 50.0%
AGCTATCCCTGAGAACTCTG+AGG + chr5.2:58443820-58443839 MS.gene44831:CDS 50.0%
AGTTCTCAGGGATAGCTGCT+AGG - chr5.2:58443817-58443836 None:intergenic 50.0%
CACGATTTGAGCTTGAGCCA+TGG + chr5.2:58444112-58444131 MS.gene44831:CDS 50.0%
CACTGAACAAGCTGCCGTTA+GGG + chr5.2:58442110-58442129 MS.gene44831:CDS 50.0%
CATCCTCGATTAGCGCTATG+CGG + chr5.2:58445314-58445333 MS.gene44831:CDS 50.0%
CATGGCTCAAGCTCAAATCG+TGG - chr5.2:58444114-58444133 None:intergenic 50.0%
CCAAGGAGAATACGATTGGG+AGG + chr5.2:58444872-58444891 MS.gene44831:CDS 50.0%
CCGCGTAGAATACGATTAGG+AGG + chr5.2:58445070-58445089 MS.gene44831:CDS 50.0%
CCTCCCAATCGTATTCTCCT+TGG - chr5.2:58444875-58444894 None:intergenic 50.0%
CGGTTCAATCTGCTCCCATT+CGG - chr5.2:58443131-58443150 None:intergenic 50.0%
CGTCGTCTCCTCAGAAACAA+GGG - chr5.2:58444912-58444931 None:intergenic 50.0%
CTTCCTTGTGCTTGCATCAC+CGG - chr5.2:58444848-58444867 None:intergenic 50.0%
GATGAGAGTAGACCTGTCCA+GGG - chr5.2:58443334-58443353 None:intergenic 50.0%
GCATCGCTATAGCAATCAGC+TGG - chr5.2:58443869-58443888 None:intergenic 50.0%
GCCTGATAGCCAAATTCTGG+TGG - chr5.2:58444174-58444193 None:intergenic 50.0%
GGAGAGTAATTGGCAGTCGT+AGG - chr5.2:58443725-58443744 None:intergenic 50.0%
GTCGCTAGTGAGGAAGATAC+AGG - chr5.2:58443779-58443798 None:intergenic 50.0%
TCAACAAGCTCCTCATCGGT+AGG - chr5.2:58442148-58442167 None:intergenic 50.0%
TCACTGAACAAGCTGCCGTT+AGG + chr5.2:58442109-58442128 MS.gene44831:CDS 50.0%
TCGGATACTGTTGTCGATGG+CGG + chr5.2:58444767-58444786 MS.gene44831:CDS 50.0%
TTCCTTGTGCTTGCATCACC+GGG - chr5.2:58444847-58444866 None:intergenic 50.0%
TTTACCGTCGTCGCAACAAG+CGG + chr5.2:58442069-58442088 MS.gene44831:CDS 50.0%
TTTGAGCCTTGGGATTTGCC+TGG + chr5.2:58442241-58442260 MS.gene44831:CDS 50.0%
! AAGCACAAGGAAGTGCACCA+AGG + chr5.2:58444855-58444874 MS.gene44831:CDS 50.0%
! CAAGCATTCCCTTGTTTCCG+AGG + chr5.2:58445099-58445118 MS.gene44831:CDS 50.0%
! GCGGCACTGGAATTAGGATA+AGG + chr5.2:58444786-58444805 MS.gene44831:CDS 50.0%
!! CCTTGTTTCTGAGGAGACGA+CGG + chr5.2:58444910-58444929 MS.gene44831:CDS 50.0%
!! TTTAGAAGTACCGGCTGCAG+AGG + chr5.2:58443919-58443938 MS.gene44831:CDS 50.0%
AAATGGGTCGTGCAGCGACT+CGG + chr5.2:58444332-58444351 MS.gene44831:CDS 55.0%
AACCCGGTGATGCAAGCACA+AGG + chr5.2:58444842-58444861 MS.gene44831:CDS 55.0%
ACCGGCTGCAGAGGTAAGAT+GGG + chr5.2:58443928-58443947 MS.gene44831:intron 55.0%
AGACCGCATAGCGCTAATCG+AGG - chr5.2:58445320-58445339 None:intergenic 55.0%
AGAGTAGACCTGTCCAGGGT+TGG - chr5.2:58443330-58443349 None:intergenic 55.0%
CAATGAGTCCTCGTCCCCTT+CGG - chr5.2:58443263-58443282 None:intergenic 55.0%
CATGGGCCAAATGACCACTG+TGG + chr5.2:58444718-58444737 MS.gene44831:CDS 55.0%
CCGTCGTCTCCTCAGAAACA+AGG - chr5.2:58444913-58444932 None:intergenic 55.0%
CTGAGGAGACGACGGAAGAT+GGG + chr5.2:58444918-58444937 MS.gene44831:CDS 55.0%
GAAGGGGACGAGGACTCATT+GGG + chr5.2:58443262-58443281 MS.gene44831:CDS 55.0%
GCCCCGCGTAGAATACGATT+AGG + chr5.2:58445067-58445086 MS.gene44831:CDS 55.0%
TCTGAGGAGACGACGGAAGA+TGG + chr5.2:58444917-58444936 MS.gene44831:CDS 55.0%
TGCATCACCGGGTTCATGTC+TGG - chr5.2:58444836-58444855 None:intergenic 55.0%
TTGGGACGAGTTCTCCAGTG+AGG + chr5.2:58444263-58444282 MS.gene44831:CDS 55.0%
! CAGCGACTCGGATGTGGAAT+TGG + chr5.2:58444344-58444363 MS.gene44831:CDS 55.0%
! GTGGAAAGTGTGCATGGGCT+GGG - chr5.2:58444155-58444174 None:intergenic 55.0%
! TACCGGCTGCAGAGGTAAGA+TGG + chr5.2:58443927-58443946 MS.gene44831:intron 55.0%
! TCGATGGCGGCACTGGAATT+AGG + chr5.2:58444780-58444799 MS.gene44831:CDS 55.0%
! TCGCTGCACGACCCATTTTC+TGG - chr5.2:58444330-58444349 None:intergenic 55.0%
! TGGAAAGTGTGCATGGGCTG+GGG - chr5.2:58444154-58444173 None:intergenic 55.0%
! TTTTGCGGAGTCACTCCCTC+TGG - chr5.2:58444644-58444663 None:intergenic 55.0%
!! TGCGCGTTCCCTTGTTTCTG+AGG + chr5.2:58444901-58444920 MS.gene44831:CDS 55.0%
CAAGCTCCTCATCGGTAGGC+CGG - chr5.2:58442144-58442163 None:intergenic 60.0%
CAGCACTCTCAGCAGCAGCA+TGG - chr5.2:58445171-58445190 None:intergenic 60.0%
CGAAGGGGACGAGGACTCAT+TGG + chr5.2:58443261-58443280 MS.gene44831:CDS 60.0%
GCCCATCTTACCTCTGCAGC+CGG - chr5.2:58443932-58443951 None:intergenic 60.0%
TGATGGCACCAACCCTGGAC+AGG + chr5.2:58443319-58443338 MS.gene44831:CDS 60.0%
TGCCGTTAGGGTTCCGCTTC+CGG + chr5.2:58442122-58442141 MS.gene44831:CDS 60.0%
! ACTGTTGTCGATGGCGGCAC+TGG + chr5.2:58444773-58444792 MS.gene44831:CDS 60.0%
! GAGCTTGATGGCACCAACCC+TGG + chr5.2:58443314-58443333 MS.gene44831:CDS 60.0%
! GGTGGAAAGTGTGCATGGGC+TGG - chr5.2:58444156-58444175 None:intergenic 60.0%
! TCCTCCGCTTGTTGCGACGA+CGG - chr5.2:58442076-58442095 None:intergenic 60.0%
ACCGTCGTCGCAACAAGCGG+AGG + chr5.2:58442072-58442091 MS.gene44831:CDS 65.0%
CCTCATCGGTAGGCCGGAAG+CGG - chr5.2:58442138-58442157 None:intergenic 65.0%
GCAACAAGCGGAGGAGCTGG+CGG + chr5.2:58442081-58442100 MS.gene44831:CDS 65.0%
GGCCGGAAGCGGAACCCTAA+CGG - chr5.2:58442127-58442146 None:intergenic 65.0%
GTCGCAACAAGCGGAGGAGC+TGG + chr5.2:58442078-58442097 MS.gene44831:CDS 65.0%
TACGCTGGTCGGGCTCCGAA+GGG + chr5.2:58443245-58443264 MS.gene44831:CDS 65.0%
! GTCGTGCAGCGACTCGGATG+TGG + chr5.2:58444338-58444357 MS.gene44831:CDS 65.0%
ACGCTGGTCGGGCTCCGAAG+GGG + chr5.2:58443246-58443265 MS.gene44831:CDS 70.0%
CCGCTTCCGGCCTACCGATG+AGG + chr5.2:58442135-58442154 MS.gene44831:CDS 70.0%
CTACGCTGGTCGGGCTCCGA+AGG + chr5.2:58443244-58443263 MS.gene44831:CDS 70.0%
GTCGGGCTCCGAAGGGGACG+AGG + chr5.2:58443252-58443271 MS.gene44831:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 58442049 58445429 58442049 ID=MS.gene44831
chr5.2 mRNA 58442049 58445429 58442049 ID=MS.gene44831.t1;Parent=MS.gene44831
chr5.2 exon 58442049 58442262 58442049 ID=MS.gene44831.t1.exon1;Parent=MS.gene44831.t1
chr5.2 CDS 58442049 58442262 58442049 ID=cds.MS.gene44831.t1;Parent=MS.gene44831.t1
chr5.2 exon 58443063 58443340 58443063 ID=MS.gene44831.t1.exon2;Parent=MS.gene44831.t1
chr5.2 CDS 58443063 58443340 58443063 ID=cds.MS.gene44831.t1;Parent=MS.gene44831.t1
chr5.2 exon 58443632 58443940 58443632 ID=MS.gene44831.t1.exon3;Parent=MS.gene44831.t1
chr5.2 CDS 58443632 58443940 58443632 ID=cds.MS.gene44831.t1;Parent=MS.gene44831.t1
chr5.2 exon 58444075 58444377 58444075 ID=MS.gene44831.t1.exon4;Parent=MS.gene44831.t1
chr5.2 CDS 58444075 58444377 58444075 ID=cds.MS.gene44831.t1;Parent=MS.gene44831.t1
chr5.2 exon 58444617 58445429 58444617 ID=MS.gene44831.t1.exon5;Parent=MS.gene44831.t1
chr5.2 CDS 58444617 58445429 58444617 ID=cds.MS.gene44831.t1;Parent=MS.gene44831.t1
Gene Sequence

>MS.gene44831

ATGGGTGCCGTAGTTGAGTGTTTACCGTCGTCGCAACAAGCGGAGGAGCTGGCGGTTCTCTCACTGAACAAGCTGCCGTTAGGGTTCCGCTTCCGGCCTACCGATGAGGAGCTTGTTGATTTTTATTTAAGGATGAAGATCAATGGAAACGGTGATGAAGTTTGGGTTATTCGTGAAGTTGATGTTTGTAAATTTGAGCCTTGGGATTTGCCTGGTAAGAATTTTTTTTTTTTTTTTATCTTTAATTGTTTCTTGAATTTAGGTTTTTGTTCTTTTGATGATTTGGACTGGTTTTGATTTGGATAAGTGATTGTTGTTACTACATTTTGATTGTGATCGTTTGTGTTTGATATGTAAATTTATAAGTGGCTGTTATTTTATTTTGTTTTGTTTTACTGTTTCTGTGTAATTTTGCATGTTGAATGAGTTTTTTTTTTCTATGGAAATTTTTTGATTTTTAATGGTTAAATGTGGTTATGATATTTGATTTGATGATTTTATTGATGATGGGTTTGTGGGTGAATTTTGTTGCAGGTTTAACGGTGGTAATGAACATTAGTTTTGTTGAAAATTAGGGAAAATGTTTTGTTGAAAATTAGGGAAAATTAATCTTGAATGGTTACGATATGATGATTTTGTTTTTGTCGATCGAAGATTTCATGGTTTTCTTGATGATGGGGCTTGTTGTAGGTTTATCGGTGGTTTTGAACACTAATTTTGGTGAAATTTGGGGGAAATTAATTTTGTATGGTTAGATCATGTGGTTGTGGTATTTGATATGATGATTTTGTTATGTTATTGTTGACTGAAAATTTCATGATTTTGATGATGATGGGGTTTGTGGTGTTTTTGTTGTAGATTTATCAAAGCTACTGAACAATAATTTTTGTGAGAATTAATTTTGAATGGTTAGATCATGCGGTTATGGCATTTGATATGATGATTTTGTTTTTGTTAAGTAAAAATTTCATGATTTTTGTTGATGATGGGGTTGATGTTTTTTTCTTTTTGTAGATTTATCGATCGTAAGGAACAAGGATCCAGAGTGGTTTTTCTTCTGTCCAATGGATCGGAAGTATCCGAATGGGAGCAGATTGAACCGCGCAACAACTAATGGGTATTGGAAGGCAACAGGAAAAGATCGAAGGATCAAGTCTGGTGCTACCTTGATTGGAATGAAGAAGACTCTTGTTTTCTACGCTGGTCGGGCTCCGAAGGGGACGAGGACTCATTGGGTTATGCATGAATATAGACCTACCTTAAAAGAGCTTGATGGCACCAACCCTGGACAGGTCTACTCTCATCTCCTCTCTTTTTTATTTTATGTTTGGTTTTAATGACTGATTTGAAGTATTTGTTGCTGACTTTGAGTTAATGATGCTGGTTGTTGTAACTTGATTCTAATTCTATATGTTCATTGTGTTCCATAATTTTTTCAACGCACTTCATTACATCTACCACAACTCCGTGTACCTTTATTTTGTCCTTGACTAATGTAAAGCTACTGTGATTTATGACTGCCTAAGCAATTATAGATAATTATGTTTCTAACTTCTCAACATGGTTGATTTGACTTATGCCAGAACCCATATGTCCTTTGTCGCTTGTTTAAGAAGCAAGATGAGAGTCTTGCAAGTTCAAACTGTGGTGAAGCGGAGCAGACTACTTCAACTCCTACGACTGCCAATTACTCTCCAGAAGAAATACAGTCTGACCTAAGTCTGGTTCCTGTATCTTCCTCACTAGCGACAGAAGATGAAAGGCACCTAGCAGCTATCCCTGAGAACTCTGAGGAAGCAATGTCCCACGTTATAACCCCAGCTGATTGCTATAGCGATGCATGTAATGCTTCTGATGCACAACATCAGAGTTTAGAAGTACCGGCTGCAGAGGTAAGATGGGCTAACTGTAACTGAGTTTAATCTTTTATTTGTTCCTTTAATGTTTTATTTGAATGATCCTTCTATTGATTTGAAGTCACTGAATTTGTTGATTTCGTAACTATACTTGATGCTAACTATTTCAGGAAGACCAGCTGTTAAACTTGGACATATTTGATAGCCCACGATTTGAGCTTGAGCCATGGGATGATAAGTTATTCTCCCCAGCCCATGCACACTTTCCACCAGAATTTGGCTATCAGGCCAACAATGAATTAATTCAGTATGGTACAAACGGGACAGATGTTTCAGACTTTTTCAACTCGTGTGTTAATTGGGACGAGTTCTCCAGTGAGGCGTCTATCAGTCTTGATCTGAGCCCAACCATTTTTAAAATTCCAGAAAATGGGTCGTGCAGCGACTCGGATGTGGAATTGGCCAATATGATGGTTAGTAACAGCTCTGACCCCTTTTTTTTTTTTGGTCATTCTAGATTTCTGCCATCAGAATGCAATTTGTTAGTTTCAGAACACATAGCGGCAGTTCTAACCTTTTCCTGTTAATGTTCTTAAGCTAATTGCCTTCTCTAATTGACACCTTAACACAAATTTTATTGTATATATGTCGGCATATTTAGTTATGTTTTCTAATACCATGGGTATAATTTAAATCTGATTGTATGCTGCAGAATCTGCTAGCATCACATGATTATCCAGAGGGAGTGACTCCGCAAAATAGTGATGTAGGGTTGTTTCAGAACAATTCCCAGATGACTCTTTCTAATGATAGCATGGGCCAAATGACCACTGTGGTAAATGAATATGAGCAAATGTGGAATTCGGATACTGTTGTCGATGGCGGCACTGGAATTAGGATAAGGTCTAGACAAGGACAAAGTGAACAACCAGACATGAACCCGGTGATGCAAGCACAAGGAAGTGCACCAAGGAGAATACGATTGGGAGGATTTGTTGCGCGTTCCCTTGTTTCTGAGGAGACGACGGAAGATGGGAGTTGTGCATCAGAATATGAACAATCGAGGATTTTGGACAGTGACACTGGTATAAGGATAAGGAGGACTCGACAAAGAAGAAATGAAGAGCCAAACATGAACCCAGTGATTCAAGCACAAGGTAGTGCCCCGCGTAGAATACGATTAGGAGGATTTGTCAAGCATTCCCTTGTTTCCGAGGAGACTACAAAAGATGAGAGTTTGCAGGAGACGGAAGCTTCAGAAAACCATGCTGCTGCTGAGAGTGCTGCCGATTCAGAGAAGACATCTCCCATGTCAGCAAGAGAGATCTGTGAGCAACATGTTACAACTGCAGAATCCAACTTGGGGTCGAAAAACTTTCTGTTGGGCAGGGTTCGGTGCACTTCAAAGACATCCTCGATTAGCGCTATGCGGTCTACTGTTCTTGCATATTCTGCCATTGTAATGGTCTCGCTAGTATTGCTTGTTAATATTTGGGGATATCTTAGATTTAGAAATGCTTACTAG
Protein sequence

>MS.gene44831.t1

MGAVVECLPSSQQAEELAVLSLNKLPLGFRFRPTDEELVDFYLRMKINGNGDEVWVIREVDVCKFEPWDLPDLSIVRNKDPEWFFFCPMDRKYPNGSRLNRATTNGYWKATGKDRRIKSGATLIGMKKTLVFYAGRAPKGTRTHWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKQDESLASSNCGEAEQTTSTPTTANYSPEEIQSDLSLVPVSSSLATEDERHLAAIPENSEEAMSHVITPADCYSDACNASDAQHQSLEVPAAEEDQLLNLDIFDSPRFELEPWDDKLFSPAHAHFPPEFGYQANNELIQYGTNGTDVSDFFNSCVNWDEFSSEASISLDLSPTIFKIPENGSCSDSDVELANMMNLLASHDYPEGVTPQNSDVGLFQNNSQMTLSNDSMGQMTTVVNEYEQMWNSDTVVDGGTGIRIRSRQGQSEQPDMNPVMQAQGSAPRRIRLGGFVARSLVSEETTEDGSCASEYEQSRILDSDTGIRIRRTRQRRNEEPNMNPVIQAQGSAPRRIRLGGFVKHSLVSEETTKDESLQETEASENHAAAESAADSEKTSPMSAREICEQHVTTAESNLGSKNFLLGRVRCTSKTSSISAMRSTVLAYSAIVMVSLVLLVNIWGYLRFRNAY