AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene45308

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45308.t1 MTR_0008s0470 81.176 255 35 3 13 261 44 291 6.77e-137 387
MS.gene45308.t1 MTR_0008s0390 78.400 250 32 3 13 261 44 272 3.15e-125 357
MS.gene45308.t1 MTR_0251s0050 68.924 251 54 6 13 261 44 272 4.06e-101 296
MS.gene45308.t1 MTR_2g089420 38.314 261 124 5 13 238 42 300 5.73e-52 175
MS.gene45308.t1 MTR_2g089450 35.094 265 96 10 13 261 43 247 4.65e-38 134
MS.gene45308.t1 MTR_1g076150 47.205 161 71 3 13 172 43 190 5.45e-38 134
MS.gene45308.t1 MTR_1g043080 76.389 72 17 0 16 87 46 117 2.29e-36 130
MS.gene45308.t1 MTR_1g043050 46.386 166 74 6 16 178 46 199 1.02e-35 128
MS.gene45308.t1 MTR_4g100720 72.368 76 21 0 11 86 42 117 2.43e-35 124
MS.gene45308.t1 MTR_7g096930 69.412 85 24 1 16 100 46 128 3.43e-35 127
MS.gene45308.t1 MTR_0197s0010 50.442 113 55 1 13 125 32 143 2.81e-34 124
MS.gene45308.t1 MTR_0008s0280 53.333 105 40 2 3 105 40 137 5.48e-34 123
MS.gene45308.t1 MTR_3g097450 56.481 108 42 2 15 118 45 151 6.77e-34 124
MS.gene45308.t1 MTR_7g115650 64.634 82 29 0 15 96 45 126 9.13e-34 121
MS.gene45308.t1 MTR_4g125520 59.000 100 38 1 8 104 35 134 9.79e-34 124
MS.gene45308.t1 MTR_1g112760 60.000 85 29 1 8 87 34 118 2.67e-33 121
MS.gene45308.t1 MTR_3g077110 61.176 85 28 1 8 87 33 117 2.93e-33 124
MS.gene45308.t1 MTR_1g085040 74.286 70 18 0 16 85 46 115 4.16e-33 124
MS.gene45308.t1 MTR_4g105130 43.151 146 61 3 16 161 46 169 5.97e-33 123
MS.gene45308.t1 MTR_8g027345 61.798 89 34 0 15 103 45 133 7.62e-33 122
MS.gene45308.t1 MTR_1g100653 70.833 72 21 0 15 86 45 116 1.51e-32 120
MS.gene45308.t1 MTR_2g097910 72.857 70 19 0 16 85 54 123 2.21e-32 121
MS.gene45308.t1 MTR_8g031360 68.000 75 24 0 13 87 45 119 4.14e-32 119
MS.gene45308.t1 MTR_1g085640 71.429 70 20 0 16 85 46 115 4.17e-32 121
MS.gene45308.t1 MTR_7g110830 56.436 101 31 2 16 103 46 146 4.46e-32 121
MS.gene45308.t1 MTR_3g028740 73.239 71 19 0 15 85 55 125 5.17e-32 120
MS.gene45308.t1 MTR_4g073420 63.514 74 27 0 15 88 45 118 5.91e-32 119
MS.gene45308.t1 MTR_7g117730 70.423 71 21 0 15 85 45 115 7.44e-32 118
MS.gene45308.t1 MTR_5g079670 67.123 73 24 0 15 87 44 116 7.88e-32 117
MS.gene45308.t1 MTR_7g076740 71.429 70 20 0 16 85 47 116 8.33e-32 119
MS.gene45308.t1 MTR_4g065017 71.429 70 20 0 16 85 51 120 8.86e-32 119
MS.gene45308.t1 MTR_4g102380 65.333 75 26 0 13 87 43 117 1.05e-31 118
MS.gene45308.t1 MTR_0063s0090 66.197 71 24 0 13 83 43 113 1.11e-31 117
MS.gene45308.t1 MTR_8g095390 64.103 78 24 1 15 88 45 122 1.54e-31 119
MS.gene45308.t1 MTR_1g017000 61.842 76 29 0 16 91 47 122 2.80e-31 116
MS.gene45308.t1 MTR_2g064160 65.333 75 26 0 13 87 42 116 2.87e-31 118
MS.gene45308.t1 MTR_6g090405 56.566 99 33 2 1 99 39 127 2.90e-31 116
MS.gene45308.t1 MTR_3g074520 68.056 72 23 0 16 87 46 117 3.81e-31 118
MS.gene45308.t1 MTR_4g082290 72.857 70 19 0 16 85 46 115 5.49e-31 119
MS.gene45308.t1 MTR_5g029840 65.753 73 25 0 15 87 45 117 5.51e-31 117
MS.gene45308.t1 MTR_4g082230 72.857 70 19 0 16 85 46 115 6.40e-31 119
MS.gene45308.t1 MTR_3g065440 54.639 97 43 1 13 109 43 138 7.60e-31 117
MS.gene45308.t1 MTR_2g089620 67.123 73 24 0 15 87 45 117 9.37e-31 117
MS.gene45308.t1 MTR_4g091490 66.667 72 24 0 16 87 47 118 1.31e-30 117
MS.gene45308.t1 MTR_1g100667 66.667 72 24 0 15 86 46 117 1.45e-30 115
MS.gene45308.t1 MTR_4g478180 65.333 75 26 0 13 87 44 118 1.53e-30 117
MS.gene45308.t1 MTR_2g011660 66.667 72 24 0 16 87 47 118 2.05e-30 116
MS.gene45308.t1 MTR_7g011170 71.429 70 20 0 16 85 46 115 2.06e-30 115
MS.gene45308.t1 MTR_3g083540 61.039 77 30 0 15 91 74 150 2.16e-30 115
MS.gene45308.t1 MTR_8g017390 64.935 77 25 1 16 90 47 123 2.51e-30 118
MS.gene45308.t1 MTR_3g461490 66.197 71 24 0 15 85 45 115 3.05e-30 115
MS.gene45308.t1 MTR_5g079290 54.167 96 41 1 15 107 50 145 3.21e-30 114
MS.gene45308.t1 MTR_8g020490 64.000 75 27 0 11 85 37 111 4.05e-30 113
MS.gene45308.t1 MTR_4g121460 64.789 71 25 0 15 85 45 115 5.11e-30 115
MS.gene45308.t1 MTR_2g099740 66.667 72 24 0 16 87 46 117 6.08e-30 116
MS.gene45308.t1 MTR_4g485530 65.753 73 25 0 15 87 45 117 6.82e-30 111
MS.gene45308.t1 MTR_1g086530 63.158 76 28 0 11 86 62 137 7.03e-30 113
MS.gene45308.t1 MTR_8g042410 65.714 70 24 0 16 85 71 140 7.31e-30 117
MS.gene45308.t1 MTR_5g042030 66.667 72 24 0 16 87 41 112 8.02e-30 113
MS.gene45308.t1 MTR_1g045610 56.818 88 38 0 11 98 50 137 9.96e-30 112
MS.gene45308.t1 MTR_5g078140 63.014 73 27 0 13 85 43 115 1.05e-29 114
MS.gene45308.t1 MTR_5g007370 62.667 75 28 0 13 87 43 117 1.06e-29 113
MS.gene45308.t1 MTR_7g010210 44.231 156 68 4 16 152 46 201 1.18e-29 112
MS.gene45308.t1 MTR_2g067420 71.212 66 19 0 15 80 47 112 1.20e-29 114
MS.gene45308.t1 MTR_6g055910 58.667 75 31 0 13 87 16 90 1.40e-29 112
MS.gene45308.t1 MTR_6g012690 70.000 70 21 0 16 85 46 115 1.48e-29 114
MS.gene45308.t1 MTR_7g010210 68.571 70 22 0 16 85 46 115 1.48e-29 113
MS.gene45308.t1 MTR_5g014990 61.644 73 28 0 15 87 46 118 1.54e-29 113
MS.gene45308.t1 MTR_1g110460 67.606 71 23 0 16 86 60 130 1.65e-29 113
MS.gene45308.t1 MTR_8g017440 64.789 71 25 0 15 85 45 115 1.69e-29 114
MS.gene45308.t1 MTR_8g017540 63.014 73 27 0 15 87 91 163 1.83e-29 114
MS.gene45308.t1 MTR_8g060940 70.588 68 20 0 15 82 40 107 2.11e-29 111
MS.gene45308.t1 MTR_3g011610 65.714 70 24 0 16 85 71 140 2.56e-29 115
MS.gene45308.t1 MTR_4g057635 56.977 86 31 1 8 87 33 118 3.23e-29 112
MS.gene45308.t1 MTR_7g035075 63.514 74 27 0 11 84 43 116 3.42e-29 110
MS.gene45308.t1 MTR_1g073170 61.333 75 29 0 11 85 49 123 3.70e-29 111
MS.gene45308.t1 MTR_8g098860 64.789 71 25 0 15 85 45 115 3.74e-29 112
MS.gene45308.t1 MTR_2g034790 61.972 71 27 0 15 85 45 115 4.03e-29 112
MS.gene45308.t1 MTR_8g017500 65.714 70 24 0 16 85 46 115 4.15e-29 113
MS.gene45308.t1 MTR_4g063100 61.333 75 29 0 11 85 36 110 4.36e-29 110
MS.gene45308.t1 MTR_7g111290 71.875 64 18 0 16 79 4 67 5.82e-29 112
MS.gene45308.t1 MTR_0001s0360 48.718 117 56 2 16 129 41 156 6.05e-29 110
MS.gene45308.t1 MTR_5g078910 65.278 72 25 0 16 87 41 112 6.59e-29 111
MS.gene45308.t1 MTR_4g063100 64.286 70 25 0 16 85 12 81 6.93e-29 109
MS.gene45308.t1 MTR_6g006030 41.379 145 82 2 11 154 43 185 7.43e-29 108
MS.gene45308.t1 MTR_6g055910 61.111 72 28 0 16 87 48 119 7.48e-29 110
MS.gene45308.t1 MTR_3g103570 63.380 71 26 0 15 85 46 116 7.74e-29 112
MS.gene45308.t1 MTR_5g079220 51.546 97 43 1 15 107 54 150 7.75e-29 110
MS.gene45308.t1 MTR_8g017340 63.636 77 27 1 16 91 47 123 8.78e-29 114
MS.gene45308.t1 MTR_3g052430 61.429 70 27 0 16 85 75 144 1.12e-28 114
MS.gene45308.t1 MTR_5g078950 70.588 68 20 0 16 83 41 108 1.17e-28 110
MS.gene45308.t1 MTR_5g078800 42.138 159 83 4 15 167 40 195 1.42e-28 109
MS.gene45308.t1 MTR_1g017140 60.274 73 29 0 15 87 46 118 2.08e-28 110
MS.gene45308.t1 MTR_1g062940 60.526 76 30 0 11 86 35 110 2.11e-28 108
MS.gene45308.t1 MTR_3g052450 60.000 70 28 0 16 85 74 143 2.25e-28 113
MS.gene45308.t1 MTR_8g017350 62.338 77 28 1 16 91 47 123 3.01e-28 113
MS.gene45308.t1 MTR_7g111290 68.657 67 21 0 13 79 43 109 3.29e-28 111
MS.gene45308.t1 MTR_2g096380 56.962 79 34 0 11 89 35 113 3.57e-28 108
MS.gene45308.t1 MTR_7g017260 50.526 95 45 1 15 107 60 154 3.65e-28 108
MS.gene45308.t1 MTR_5g010020 67.692 65 21 0 16 80 46 110 5.19e-28 109
MS.gene45308.t1 MTR_2g096380 60.274 73 29 0 16 88 21 93 6.31e-28 107
MS.gene45308.t1 MTR_5g078860 54.639 97 39 1 16 107 41 137 6.97e-28 108
MS.gene45308.t1 MTR_1g086510 61.842 76 29 0 11 86 50 125 8.28e-28 107
MS.gene45308.t1 MTR_7g102110 54.651 86 33 1 8 87 33 118 1.84e-27 107
MS.gene45308.t1 MTR_6g009430 61.644 73 28 0 15 87 45 117 2.01e-27 108
MS.gene45308.t1 MTR_1g021230 54.118 85 39 0 16 100 91 175 2.03e-27 109
MS.gene45308.t1 MTR_5g079120 52.083 96 42 2 16 107 95 190 3.55e-27 107
MS.gene45308.t1 MTR_7g087130 65.714 70 24 0 16 85 46 115 4.34e-27 107
MS.gene45308.t1 MTR_6g012180 69.231 65 20 0 16 80 46 110 4.84e-27 107
MS.gene45308.t1 MTR_0140s0030 50.000 96 47 1 16 111 47 141 4.86e-27 107
MS.gene45308.t1 MTR_0489s0020 50.000 96 47 1 16 111 47 141 4.86e-27 107
MS.gene45308.t1 MTR_4g128670 58.228 79 27 1 8 80 33 111 5.37e-27 107
MS.gene45308.t1 MTR_2g095520 58.228 79 27 1 8 80 33 111 6.35e-27 106
MS.gene45308.t1 MTR_3g039990 62.857 70 26 0 16 85 47 116 1.31e-26 105
MS.gene45308.t1 MTR_0193s0090 51.087 92 43 1 15 106 40 129 6.96e-26 101
MS.gene45308.t1 MTR_4g097570 55.128 78 29 1 8 79 33 110 1.21e-25 102
MS.gene45308.t1 MTR_4g097570 61.538 65 25 0 15 79 47 111 1.24e-25 102
MS.gene45308.t1 MTR_0247s0040 49.485 97 45 1 15 107 40 136 1.79e-25 99.4
MS.gene45308.t1 MTR_5g078930 48.454 97 46 1 15 107 42 138 9.14e-25 98.6
MS.gene45308.t1 MTR_2g088170 61.972 71 27 0 15 85 62 132 2.20e-24 101
MS.gene45308.t1 MTR_2g033170 60.526 76 30 0 11 86 53 128 6.27e-24 98.6
MS.gene45308.t1 MTR_1g083630 57.143 70 30 0 16 85 46 115 6.35e-24 100
MS.gene45308.t1 MTR_3g101290 60.000 70 28 0 17 86 69 138 2.20e-23 95.1
MS.gene45308.t1 MTR_4g123040 60.526 76 30 0 11 86 53 128 3.08e-23 96.7
MS.gene45308.t1 MTR_4g019370 38.655 119 51 1 18 114 71 189 3.38e-23 97.1
MS.gene45308.t1 MTR_7g109320 61.111 72 28 0 15 86 45 116 3.59e-23 97.1
MS.gene45308.t1 MTR_5g016510 38.843 121 64 1 18 138 38 148 1.16e-22 95.1
MS.gene45308.t1 MTR_6g015455 57.971 69 29 0 18 86 38 106 3.83e-22 95.9
MS.gene45308.t1 MTR_5g062790 39.344 122 63 4 15 128 42 160 6.47e-22 92.8
MS.gene45308.t1 MTR_8g006470 55.556 72 31 1 16 86 44 115 1.17e-21 91.7
MS.gene45308.t1 MTR_6g074860 58.209 67 28 0 18 84 37 103 1.22e-21 90.9
MS.gene45308.t1 MTR_4g094982 52.174 69 33 0 18 86 38 106 2.06e-21 90.9
MS.gene45308.t1 MTR_4g128190 35.099 151 86 5 16 154 32 182 3.65e-21 89.4
MS.gene45308.t1 MTR_3g045430 55.714 70 31 0 16 85 47 116 4.13e-21 90.5
MS.gene45308.t1 MTR_5g049190 44.737 76 40 1 9 84 45 118 5.48e-21 89.0
MS.gene45308.t1 MTR_5g041570 53.623 69 32 0 17 85 166 234 7.29e-21 91.3
MS.gene45308.t1 MTR_7g451170 37.405 131 73 3 18 144 224 349 1.09e-20 90.9
MS.gene45308.t1 MTR_5g070020 46.377 69 37 0 17 85 154 222 3.08e-20 89.0
MS.gene45308.t1 MTR_4g082040 52.941 68 32 0 18 85 138 205 3.42e-20 89.4
MS.gene45308.t1 MTR_5g088610 37.615 109 60 2 15 115 42 150 1.01e-19 87.4
MS.gene45308.t1 MTR_3g463400 43.529 85 46 1 18 102 166 248 1.16e-19 88.2
MS.gene45308.t1 MTR_5g088080 46.053 76 38 2 16 90 46 119 2.07e-19 85.1
MS.gene45308.t1 MTR_5g088150 46.053 76 38 2 16 90 46 119 2.07e-19 85.1
MS.gene45308.t1 MTR_5g488210 46.053 76 38 2 16 90 46 119 2.07e-19 85.1
MS.gene45308.t1 MTR_5g088640 35.537 121 69 3 15 128 45 163 2.55e-19 85.1
MS.gene45308.t1 MTR_5g488170 46.053 76 38 2 16 90 46 119 3.36e-19 84.3
MS.gene45308.t1 MTR_3g077650 42.857 77 42 1 9 85 207 281 3.53e-19 86.7
MS.gene45308.t1 MTR_7g037260 40.816 98 57 1 17 113 177 274 3.62e-19 85.9
MS.gene45308.t1 MTR_4g105660 39.326 89 54 0 18 106 213 301 3.76e-19 86.7
MS.gene45308.t1 MTR_4g029540 52.857 70 32 1 16 84 44 113 3.98e-19 85.1
MS.gene45308.t1 MTR_6g027340 47.826 69 36 0 17 85 48 116 6.15e-19 82.8
MS.gene45308.t1 MTR_1g026870 39.604 101 59 1 9 109 111 209 6.48e-19 86.3
MS.gene45308.t1 MTR_7g061330 49.351 77 37 1 9 85 139 213 1.09e-18 85.5
MS.gene45308.t1 MTR_7g461410 49.351 77 37 1 9 85 139 213 1.09e-18 85.5
MS.gene45308.t1 MTR_3g110028 48.052 77 38 1 9 85 111 185 1.17e-18 85.5
MS.gene45308.t1 MTR_6g027360 48.529 68 35 0 18 85 111 178 1.30e-18 84.0
MS.gene45308.t1 MTR_7g061330 46.067 89 42 1 3 85 89 177 1.55e-18 85.1
MS.gene45308.t1 MTR_5g082910 53.030 66 31 0 17 82 51 116 2.08e-18 82.8
MS.gene45308.t1 MTR_4g088015 39.326 89 51 1 18 106 254 339 2.81e-18 84.0
MS.gene45308.t1 MTR_7g035350 46.479 71 36 1 18 88 258 326 3.50e-18 84.0
MS.gene45308.t1 MTR_7g086960 54.412 68 31 0 18 85 122 189 5.42e-18 82.8
MS.gene45308.t1 MTR_1g057980 36.842 114 63 3 17 126 112 220 5.52e-18 82.0
MS.gene45308.t1 MTR_6g027370 49.275 69 35 0 17 85 131 199 1.56e-17 81.3
MS.gene45308.t1 MTR_3g089045 54.412 68 31 0 18 85 49 116 2.46e-17 80.1
MS.gene45308.t1 MTR_7g450950 42.105 76 41 1 17 89 189 264 5.48e-17 79.7
MS.gene45308.t1 MTR_5g007300 68.182 44 14 0 15 58 97 140 4.51e-15 70.9
MS.gene45308.t1 MTR_5g010650 50.000 62 31 0 18 79 143 204 4.98e-15 74.7
MS.gene45308.t1 MTR_7g037130 35.849 106 63 2 17 119 177 280 8.88e-15 73.6
MS.gene45308.t1 MTR_6g055910 54.167 48 22 0 40 87 2 49 3.68e-14 69.7
MS.gene45308.t1 MTR_7g061550 44.615 65 36 0 16 80 41 105 1.10e-13 70.5
MS.gene45308.t1 MTR_4g063100 58.696 46 19 0 40 85 1 46 1.32e-13 67.8
MS.gene45308.t1 MTR_2g096380 55.102 49 22 0 40 88 1 49 3.92e-13 66.2
MS.gene45308.t1 MTR_1g085880 46.479 71 37 1 15 84 45 115 4.58e-13 66.6
MS.gene45308.t1 MTR_8g468380 45.205 73 40 0 21 93 58 130 5.78e-13 68.6
MS.gene45308.t1 MTR_1g085770 46.479 71 37 1 15 84 45 115 5.96e-13 67.8
MS.gene45308.t1 MTR_5g038910 45.455 66 36 0 21 86 62 127 1.16e-12 67.8
MS.gene45308.t1 MTR_5g038910 45.455 66 36 0 21 86 62 127 1.83e-12 67.0
MS.gene45308.t1 MTR_1g008970 35.185 108 63 2 4 106 107 212 8.17e-12 63.9
MS.gene45308.t1 MTR_2g088730 58.974 39 16 0 40 78 34 72 2.23e-11 58.9
MS.gene45308.t1 MTR_1g076150 36.975 119 61 3 55 172 33 138 5.13e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45308.t1 AT3G23250 38.034 234 114 8 16 221 46 276 1.91e-37 133
MS.gene45308.t1 AT5G14750 65.882 85 29 0 1 85 1 85 1.55e-36 127
MS.gene45308.t1 AT2G31180 69.880 83 25 0 15 97 45 127 2.73e-36 129
MS.gene45308.t1 AT3G13540 41.420 169 82 4 15 171 56 219 2.27e-35 127
MS.gene45308.t1 AT5G14750 70.667 75 22 0 11 85 45 119 7.06e-35 124
MS.gene45308.t1 AT1G06180 73.973 73 19 0 13 85 43 115 2.19e-34 124
MS.gene45308.t1 AT5G35550 70.667 75 22 0 11 85 46 120 4.13e-34 124
MS.gene45308.t1 AT1G79180 58.763 97 38 1 16 112 48 142 7.15e-34 124
MS.gene45308.t1 AT1G79180 58.763 97 38 1 16 112 81 175 1.03e-33 124
MS.gene45308.t1 AT3G27920 68.493 73 23 0 15 87 47 119 1.23e-33 122
MS.gene45308.t1 AT4G38620 50.893 112 50 1 15 126 45 151 1.36e-33 123
MS.gene45308.t1 AT5G40330 69.333 75 23 0 11 85 41 115 1.39e-33 121
MS.gene45308.t1 AT1G22640 39.506 162 76 4 15 168 45 192 3.13e-33 122
MS.gene45308.t1 AT5G35550 71.622 74 21 0 12 85 44 117 3.28e-33 122
MS.gene45308.t1 AT1G16490 70.000 70 21 0 16 85 48 117 7.69e-33 121
MS.gene45308.t1 AT5G12870 71.831 71 20 0 15 85 51 121 1.05e-32 121
MS.gene45308.t1 AT4G28110 68.056 72 23 0 16 87 46 117 1.62e-32 120
MS.gene45308.t1 AT4G01680 56.311 103 37 2 15 109 45 147 2.90e-32 119
MS.gene45308.t1 AT3G61250 67.105 76 25 0 12 87 42 117 3.55e-32 120
MS.gene45308.t1 AT5G16770 68.056 72 23 0 16 87 46 117 3.92e-32 120
MS.gene45308.t1 AT5G16770 68.056 72 23 0 16 87 46 117 3.92e-32 120
MS.gene45308.t1 AT1G74430 70.423 71 21 0 15 85 45 115 4.76e-32 119
MS.gene45308.t1 AT2G16720 67.123 73 24 0 15 87 45 117 4.90e-32 119
MS.gene45308.t1 AT5G16770 68.056 72 23 0 16 87 46 117 5.87e-32 120
MS.gene45308.t1 AT5G16770 68.056 72 23 0 16 87 46 117 5.87e-32 120
MS.gene45308.t1 AT4G01680 56.311 103 37 2 15 109 45 147 6.86e-32 120
MS.gene45308.t1 AT5G62320 40.000 150 75 2 13 162 51 185 7.29e-32 117
MS.gene45308.t1 AT4G01680 56.311 103 37 2 15 109 57 159 7.36e-32 120
MS.gene45308.t1 AT3G02940 68.056 72 23 0 16 87 46 117 9.64e-32 119
MS.gene45308.t1 AT4G09460 51.000 100 44 2 15 109 45 144 1.03e-31 117
MS.gene45308.t1 AT4G34990 49.580 119 45 2 15 133 45 148 1.09e-31 118
MS.gene45308.t1 AT5G26660 62.651 83 26 1 3 85 7 84 1.47e-31 119
MS.gene45308.t1 AT5G54230 67.123 73 24 0 15 87 45 117 1.60e-31 119
MS.gene45308.t1 AT3G02940 68.056 72 23 0 16 87 46 117 1.62e-31 119
MS.gene45308.t1 AT3G02940 68.056 72 23 0 16 87 46 117 1.62e-31 119
MS.gene45308.t1 AT5G52600 73.239 71 19 0 15 85 45 115 2.00e-31 115
MS.gene45308.t1 AT5G06100 66.197 71 24 0 15 85 65 135 2.46e-31 120
MS.gene45308.t1 AT3G01140 71.233 73 21 0 15 87 45 117 2.48e-31 119
MS.gene45308.t1 AT3G11440 64.789 71 25 0 15 85 74 144 2.93e-31 120
MS.gene45308.t1 AT1G35515 53.763 93 38 1 15 107 45 132 3.14e-31 115
MS.gene45308.t1 AT5G16600 47.107 121 61 1 13 130 40 160 4.12e-31 117
MS.gene45308.t1 AT3G01140 71.233 73 21 0 15 87 88 160 4.57e-31 119
MS.gene45308.t1 AT3G12820 67.143 70 23 0 18 87 2 71 4.60e-31 114
MS.gene45308.t1 AT5G06100 66.197 71 24 0 15 85 65 135 4.67e-31 120
MS.gene45308.t1 AT5G06100 66.197 71 24 0 15 85 65 135 4.67e-31 120
MS.gene45308.t1 AT5G06100 66.197 71 24 0 15 85 65 135 4.67e-31 120
MS.gene45308.t1 AT5G06100 66.197 71 24 0 15 85 65 135 4.67e-31 120
MS.gene45308.t1 AT3G27810 38.202 178 84 6 13 176 2 167 5.00e-31 114
MS.gene45308.t1 AT3G11440 64.789 71 25 0 15 85 74 144 5.83e-31 120
MS.gene45308.t1 AT3G11440 64.789 71 25 0 15 85 74 144 5.83e-31 120
MS.gene45308.t1 AT3G11440 64.789 71 25 0 15 85 74 144 5.83e-31 120
MS.gene45308.t1 AT5G65230 68.056 72 23 0 16 87 46 117 6.67e-31 117
MS.gene45308.t1 AT4G05100 66.667 72 24 0 16 87 47 118 6.92e-31 117
MS.gene45308.t1 AT5G26660 67.123 73 24 0 13 85 43 115 7.73e-31 117
MS.gene45308.t1 AT4G12350 64.000 75 27 0 13 87 43 117 8.48e-31 116
MS.gene45308.t1 AT5G10280 68.056 72 23 0 16 87 46 117 9.03e-31 117
MS.gene45308.t1 AT3G12820 64.000 75 27 0 13 87 45 119 1.17e-30 114
MS.gene45308.t1 AT5G15310 68.493 73 23 0 15 87 45 117 1.21e-30 116
MS.gene45308.t1 AT5G07700 64.474 76 27 0 16 91 46 121 1.32e-30 117
MS.gene45308.t1 AT5G07700 64.474 76 27 0 16 91 46 121 1.32e-30 117
MS.gene45308.t1 AT5G15310 68.493 73 23 0 15 87 45 117 1.39e-30 116
MS.gene45308.t1 AT3G01530 51.456 103 47 1 11 110 54 156 1.40e-30 113
MS.gene45308.t1 AT1G56160 63.095 84 24 1 2 85 41 117 1.74e-30 115
MS.gene45308.t1 AT5G15310 67.568 74 24 0 15 88 45 118 1.82e-30 114
MS.gene45308.t1 AT3G08500 69.014 71 22 0 15 85 63 133 1.83e-30 116
MS.gene45308.t1 AT4G26930 65.217 69 24 0 16 84 53 121 1.88e-30 117
MS.gene45308.t1 AT3G27810 38.333 180 85 6 11 176 49 216 2.05e-30 113
MS.gene45308.t1 AT3G49690 56.818 88 32 1 7 88 32 119 2.57e-30 115
MS.gene45308.t1 AT1G57560 61.333 75 29 0 13 87 43 117 3.68e-30 114
MS.gene45308.t1 AT1G57560 61.333 75 29 0 13 87 43 117 3.83e-30 115
MS.gene45308.t1 AT3G13890 66.667 72 24 0 16 87 46 117 4.03e-30 115
MS.gene45308.t1 AT4G21440 66.667 72 24 0 16 87 46 117 4.09e-30 115
MS.gene45308.t1 AT3G13890 65.753 73 25 0 15 87 54 126 4.60e-30 115
MS.gene45308.t1 AT4G22680 61.333 75 29 0 13 87 43 117 5.08e-30 113
MS.gene45308.t1 AT4G17785 61.644 73 28 0 15 87 46 118 5.44e-30 115
MS.gene45308.t1 AT4G17785 61.644 73 28 0 15 87 46 118 5.65e-30 115
MS.gene45308.t1 AT1G09540 64.935 77 23 1 16 88 46 122 5.85e-30 115
MS.gene45308.t1 AT5G55020 66.667 69 23 0 16 84 60 128 7.26e-30 117
MS.gene45308.t1 AT3G12720 61.111 72 28 0 16 87 56 127 1.16e-29 113
MS.gene45308.t1 AT5G14340 61.039 77 30 0 9 85 51 127 1.63e-29 112
MS.gene45308.t1 AT1G18710 63.889 72 26 0 14 85 44 115 2.01e-29 112
MS.gene45308.t1 AT5G56110 66.197 71 24 0 15 85 45 115 2.04e-29 113
MS.gene45308.t1 AT5G57620 55.814 86 32 1 8 87 33 118 2.53e-29 113
MS.gene45308.t1 AT2G32460 64.286 70 25 0 16 85 52 121 2.85e-29 115
MS.gene45308.t1 AT1G18570 67.123 73 24 0 15 87 46 118 2.91e-29 113
MS.gene45308.t1 AT1G68320 63.158 76 28 0 11 86 48 123 3.25e-29 112
MS.gene45308.t1 AT5G07690 61.842 76 29 0 16 91 46 121 3.28e-29 113
MS.gene45308.t1 AT2G32460 64.286 70 25 0 16 85 40 109 3.41e-29 115
MS.gene45308.t1 AT5G65790 54.545 88 34 1 7 88 32 119 3.42e-29 113
MS.gene45308.t1 AT1G66230 64.789 71 25 0 15 85 45 115 3.73e-29 111
MS.gene45308.t1 AT3G46130 59.740 77 31 0 10 86 5 81 4.17e-29 110
MS.gene45308.t1 AT5G59780 60.526 76 30 0 11 86 37 112 4.49e-29 110
MS.gene45308.t1 AT2G47460 63.380 71 26 0 15 85 45 115 4.64e-29 113
MS.gene45308.t1 AT5G61420 60.526 76 30 0 16 91 46 121 4.83e-29 113
MS.gene45308.t1 AT5G60890 63.380 71 26 0 15 85 45 115 5.71e-29 111
MS.gene45308.t1 AT5G59780 60.000 80 31 1 8 86 12 91 8.34e-29 108
MS.gene45308.t1 AT3G24310 56.818 88 38 0 11 98 47 134 8.57e-29 110
MS.gene45308.t1 AT3G62610 63.380 71 26 0 15 85 45 115 8.78e-29 112
MS.gene45308.t1 AT3G46130 60.526 76 30 0 11 86 38 113 1.02e-28 110
MS.gene45308.t1 AT4G13480 56.818 88 38 0 11 98 35 122 1.03e-28 110
MS.gene45308.t1 AT1G34670 65.278 72 25 0 16 87 46 117 1.09e-28 112
MS.gene45308.t1 AT3G46130 63.380 71 26 0 16 86 21 91 1.37e-28 109
MS.gene45308.t1 AT1G74650 65.278 72 25 0 16 87 46 117 1.40e-28 111
MS.gene45308.t1 AT1G63910 63.380 71 26 0 15 85 45 115 1.44e-28 112
MS.gene45308.t1 AT5G23000 56.977 86 31 2 8 87 33 118 1.54e-28 111
MS.gene45308.t1 AT5G49330 62.500 72 27 0 14 85 44 115 2.26e-28 110
MS.gene45308.t1 AT5G40350 62.500 72 27 0 16 87 6 77 2.66e-28 106
MS.gene45308.t1 AT4G37780 55.814 86 32 1 8 87 33 118 2.76e-28 110
MS.gene45308.t1 AT1G25340 61.842 76 29 0 11 86 47 122 2.80e-28 109
MS.gene45308.t1 AT3G28470 69.231 65 20 0 16 80 46 110 3.75e-28 109
MS.gene45308.t1 AT5G40350 59.740 77 31 0 11 87 46 122 4.77e-28 107
MS.gene45308.t1 AT3G47600 64.286 70 25 0 16 85 40 109 5.72e-28 109
MS.gene45308.t1 AT1G74080 66.667 69 23 0 16 84 46 114 6.19e-28 109
MS.gene45308.t1 AT2G26960 62.857 70 26 0 15 84 53 122 7.04e-28 110
MS.gene45308.t1 AT2G36890 55.814 86 32 1 8 87 33 118 7.21e-28 108
MS.gene45308.t1 AT3G23250 40.964 166 74 6 28 172 1 163 8.37e-28 107
MS.gene45308.t1 AT3G47600 64.286 70 25 0 16 85 46 115 8.78e-28 109
MS.gene45308.t1 AT1G66370 49.020 102 43 1 15 107 41 142 9.16e-28 107
MS.gene45308.t1 AT2G47190 37.349 166 78 4 15 156 53 216 1.15e-27 107
MS.gene45308.t1 AT3G30210 45.217 115 53 1 11 125 56 160 1.20e-27 107
MS.gene45308.t1 AT2G36890 55.814 86 32 1 8 87 74 159 1.59e-27 108
MS.gene45308.t1 AT3G28910 63.380 71 26 0 15 85 45 115 1.68e-27 108
MS.gene45308.t1 AT5G62470 64.286 70 25 0 16 85 46 115 2.40e-27 108
MS.gene45308.t1 AT1G48000 60.274 73 29 0 14 86 64 136 4.95e-27 105
MS.gene45308.t1 AT1G25340 65.672 67 23 0 20 86 51 117 7.22e-27 105
MS.gene45308.t1 AT5G62470 64.706 68 24 0 18 85 47 114 7.38e-27 107
MS.gene45308.t1 AT5G52260 65.278 72 25 0 16 87 46 117 1.17e-26 104
MS.gene45308.t1 AT1G25340 65.672 67 23 0 20 86 51 117 1.32e-26 105
MS.gene45308.t1 AT1G08810 63.380 71 26 0 15 85 45 115 1.49e-26 104
MS.gene45308.t1 AT3G48920 62.319 69 26 0 16 84 52 120 1.89e-26 103
MS.gene45308.t1 AT4G25560 62.857 70 26 0 16 85 44 113 6.89e-26 103
MS.gene45308.t1 AT3G53200 44.444 108 59 1 15 121 9 116 1.76e-25 100
MS.gene45308.t1 AT3G53200 42.975 121 61 2 2 121 36 149 3.21e-25 100
MS.gene45308.t1 AT5G14750 70.690 58 17 0 28 85 1 58 5.24e-25 97.1
MS.gene45308.t1 AT5G14750 70.690 58 17 0 28 85 1 58 5.24e-25 97.1
MS.gene45308.t1 AT5G49620 60.526 76 30 0 11 86 55 130 2.74e-24 99.4
MS.gene45308.t1 AT3G06490 61.538 78 24 1 15 86 46 123 3.51e-24 99.4
MS.gene45308.t1 AT1G22640 35.570 149 74 4 28 168 1 135 7.06e-24 95.9
MS.gene45308.t1 AT1G66380 56.522 92 33 1 13 104 6 90 1.02e-23 92.8
MS.gene45308.t1 AT1G71030 56.716 67 29 0 21 87 5 71 1.33e-22 92.0
MS.gene45308.t1 AT1G71030 54.054 74 34 0 14 87 12 85 1.70e-22 92.0
MS.gene45308.t1 AT3G09230 56.338 71 31 0 18 88 88 158 2.43e-22 95.1
MS.gene45308.t1 AT1G66380 64.789 71 25 0 15 85 41 111 3.68e-22 89.7
MS.gene45308.t1 AT4G33450 53.425 73 34 0 18 90 52 124 9.21e-22 91.3
MS.gene45308.t1 AT1G17950 57.143 70 30 0 17 86 37 106 1.13e-21 91.3
MS.gene45308.t1 AT4G37260 52.857 70 33 0 17 86 45 114 2.42e-21 91.7
MS.gene45308.t1 AT1G69560 46.154 91 48 1 18 107 140 230 2.49e-21 91.7
MS.gene45308.t1 AT1G69560 46.154 91 48 1 18 107 156 246 2.71e-21 91.7
MS.gene45308.t1 AT1G66390 63.380 71 26 0 15 85 41 111 4.79e-21 89.4
MS.gene45308.t1 AT1G56650 61.972 71 27 0 15 85 41 111 4.85e-21 89.4
MS.gene45308.t1 AT1G26780 53.623 69 32 0 17 85 130 198 8.33e-21 89.4
MS.gene45308.t1 AT1G26780 53.623 69 32 0 17 85 130 198 8.35e-21 90.5
MS.gene45308.t1 AT5G49620 51.111 90 30 1 11 86 55 144 9.77e-21 89.7
MS.gene45308.t1 AT2G25230 49.315 73 35 1 17 89 58 128 1.50e-20 87.8
MS.gene45308.t1 AT5G67300 52.857 70 33 0 17 86 38 107 1.72e-20 89.0
MS.gene45308.t1 AT3G27785 49.275 69 35 0 17 85 221 289 1.99e-20 90.1
MS.gene45308.t1 AT5G11510 54.412 68 31 0 18 85 114 181 4.12e-20 90.1
MS.gene45308.t1 AT5G11510 54.412 68 31 0 18 85 114 181 4.12e-20 90.1
MS.gene45308.t1 AT5G11510 54.412 68 31 0 18 85 114 181 4.12e-20 90.1
MS.gene45308.t1 AT3G60460 38.129 139 58 4 16 128 45 181 4.65e-20 87.8
MS.gene45308.t1 AT2G23290 51.429 70 34 0 17 86 45 114 4.78e-20 87.8
MS.gene45308.t1 AT5G40360 49.254 67 34 0 18 84 191 257 4.94e-20 88.6
MS.gene45308.t1 AT5G11510 54.412 68 31 0 18 85 114 181 5.16e-20 89.7
MS.gene45308.t1 AT5G11510 54.412 68 31 0 18 85 114 181 5.89e-20 89.4
MS.gene45308.t1 AT3G50060 39.796 98 57 1 17 114 38 133 6.71e-20 87.4
MS.gene45308.t1 AT2G39880 52.113 71 34 0 18 88 83 153 6.93e-20 88.2
MS.gene45308.t1 AT5G17800 41.000 100 50 1 16 115 124 214 8.57e-20 87.4
MS.gene45308.t1 AT2G26950 54.237 59 27 0 22 80 56 114 1.70e-19 87.0
MS.gene45308.t1 AT3G55730 38.710 124 62 2 18 132 89 207 1.77e-19 87.4
MS.gene45308.t1 AT4G18770 47.059 68 36 0 18 85 250 317 2.62e-19 87.0
MS.gene45308.t1 AT1G73410 58.824 68 28 0 18 85 39 106 3.26e-19 84.3
MS.gene45308.t1 AT1G73410 57.971 69 29 0 17 85 38 106 6.31e-19 82.8
MS.gene45308.t1 AT3G09370 50.725 69 34 0 18 86 168 236 1.09e-18 85.5
MS.gene45308.t1 AT3G09370 50.725 69 34 0 18 86 163 231 1.09e-18 85.5
MS.gene45308.t1 AT5G02320 48.052 77 38 1 9 85 153 227 1.36e-18 85.1
MS.gene45308.t1 AT5G02320 48.052 77 38 1 9 85 153 227 1.36e-18 85.1
MS.gene45308.t1 AT3G09370 50.725 69 34 0 18 86 176 244 1.41e-18 85.1
MS.gene45308.t1 AT5G11050 27.650 217 127 6 18 216 138 342 1.62e-18 84.7
MS.gene45308.t1 AT5G58850 44.118 68 38 0 18 85 138 205 1.76e-18 84.7
MS.gene45308.t1 AT5G02320 48.052 77 38 1 9 85 93 167 1.82e-18 84.7
MS.gene45308.t1 AT4G32730 50.000 68 34 0 18 85 120 187 3.62e-18 84.3
MS.gene45308.t1 AT4G32730 50.000 68 34 0 18 85 120 187 3.62e-18 84.3
MS.gene45308.t1 AT4G32730 50.000 68 34 0 18 85 120 187 3.62e-18 84.3
MS.gene45308.t1 AT4G32730 50.000 68 34 0 18 85 120 187 3.62e-18 84.3
MS.gene45308.t1 AT4G32730 50.000 68 34 0 18 85 120 187 3.83e-18 84.3
MS.gene45308.t1 AT3G29020 48.529 68 35 0 18 85 98 165 4.48e-18 81.3
MS.gene45308.t1 AT3G29020 48.529 68 35 0 18 85 100 167 4.66e-18 82.4
MS.gene45308.t1 AT1G18960 46.250 80 37 2 16 91 41 118 3.28e-17 80.1
MS.gene45308.t1 AT5G40430 44.444 72 38 1 18 89 86 155 5.71e-17 78.6
MS.gene45308.t1 AT4G00540 48.529 68 35 0 18 85 139 206 1.03e-16 79.3
MS.gene45308.t1 AT4G00540 48.529 68 35 0 18 85 137 204 1.47e-16 79.0
MS.gene45308.t1 AT2G37630 43.333 90 45 1 16 105 38 121 8.67e-16 76.6
MS.gene45308.t1 AT5G39700 44.578 83 36 1 18 90 89 171 2.73e-15 72.4
MS.gene45308.t1 AT5G59780 59.574 47 19 0 40 86 1 47 1.37e-14 70.1
MS.gene45308.t1 AT3G46130 59.574 47 19 0 40 86 1 47 2.11e-14 70.1
MS.gene45308.t1 AT1G14350 41.250 80 47 0 21 100 61 140 5.97e-14 71.2
MS.gene45308.t1 AT1G14350 41.250 80 47 0 21 100 61 140 5.97e-14 71.2
MS.gene45308.t1 AT2G02820 41.892 74 43 0 21 94 66 139 4.26e-13 68.9
MS.gene45308.t1 AT2G02820 41.892 74 43 0 21 94 66 139 4.63e-13 68.9
MS.gene45308.t1 AT2G02820 41.892 74 43 0 21 94 66 139 5.73e-13 68.2
MS.gene45308.t1 AT4G25560 62.791 43 16 0 43 85 5 47 1.06e-12 65.9
MS.gene45308.t1 AT1G14350 40.789 76 45 0 25 100 22 97 4.45e-12 65.9
MS.gene45308.t1 AT1G14350 40.789 76 45 0 25 100 22 97 4.45e-12 65.9

Find 54 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACTACTTTGGATGATTT+TGG 0.124584 4.3:+52935258 MS.gene45308:CDS
CTATAGTATATGATGATATT+TGG 0.196587 4.3:+52935565 MS.gene45308:CDS
AATTCACTAGATGATGAAAA+TGG 0.245627 4.3:-52935210 None:intergenic
TTGAGGAGTAATTTGGTAAA+TGG 0.245669 4.3:-52935148 None:intergenic
GGCCCTTGGTGTCTGAGATT+TGG 0.262281 4.3:-52935179 None:intergenic
GATGATGAAAATGGGGATAA+AGG 0.281197 4.3:-52935201 None:intergenic
ATTGCTTATGTCACTAGATA+TGG 0.291146 4.3:+52934673 None:intergenic
AACTGGATTGAGGAGTAATT+TGG 0.303507 4.3:-52935155 None:intergenic
ATCCATAACAAAACTTTCAT+TGG 0.308172 4.3:-52935406 None:intergenic
GCCCTTGGTGTCTGAGATTT+GGG 0.309174 4.3:-52935178 None:intergenic
TTTGTTATGGATAACGATTT+TGG 0.329855 4.3:+52935417 MS.gene45308:CDS
ACTTCATTATCTGTTCTTCC+AGG 0.339491 4.3:-52935006 None:intergenic
TTAGGTGGCTGAATTATCTT+AGG 0.343554 4.3:+52934881 MS.gene45308:CDS
AAGATGTGGATGAAAACTTT+TGG 0.346585 4.3:+52935301 MS.gene45308:CDS
CTAGATATGGTTGCTGGAAT+TGG 0.347558 4.3:+52934686 MS.gene45308:CDS
GGTGTCTGAGATTTGGGAAC+TGG 0.373391 4.3:-52935172 None:intergenic
ATTCACTAGATGATGAAAAT+GGG 0.403181 4.3:-52935209 None:intergenic
ATATCACAGTTCCACTACTT+TGG 0.405915 4.3:+52935248 MS.gene45308:CDS
ATGATGAAAATGGGGATAAA+GGG 0.417667 4.3:-52935200 None:intergenic
ACCATTGCGGCCGAGTTACC+TGG 0.444329 4.3:+52934988 MS.gene45308:CDS
ATGTCACTAGATATGGTTGC+TGG 0.454705 4.3:+52934680 MS.gene45308:CDS
ACTTTCATTGGACGAATGAC+CGG 0.459504 4.3:-52935394 None:intergenic
TACCTGCAAACTTGGGAAGT+TGG 0.466120 4.3:-52934711 None:intergenic
ATCTGTTCTTCCAGGTAACT+CGG 0.488002 4.3:-52934998 None:intergenic
ATTGCTGACATCTTTGCCGT+TGG 0.490043 4.3:+52935527 MS.gene45308:CDS
GAGATTTGGGAACTGGATTG+AGG 0.491808 4.3:-52935165 None:intergenic
TACTATTCCACTTGGTGTGT+TGG 0.498616 4.3:-52935337 None:intergenic
CTTTCATTGGACGAATGACC+GGG 0.500764 4.3:-52935393 None:intergenic
CTTAGGCCTAATATCAAAAG+AGG 0.501825 4.3:+52934898 MS.gene45308:CDS
GGATTCATTTATAAAAGATG+TGG 0.515547 4.3:+52935287 MS.gene45308:CDS
TGGGACATGTCATCCTCATA+TGG 0.519430 4.3:-52935492 None:intergenic
GATATATCTCTCCCTTGTGT+GGG 0.527770 4.3:-52935126 None:intergenic
GGATATATCTCTCCCTTGTG+TGG 0.530263 4.3:-52935127 None:intergenic
TCCAGGTAACTCGGCCGCAA+TGG 0.530910 4.3:-52934989 None:intergenic
TTTCAGGTCTTTCAAGGTGT+GGG 0.533782 4.3:+52934845 MS.gene45308:intron
ATTTCAGGTCTTTCAAGGTG+TGG 0.533848 4.3:+52934844 MS.gene45308:intron
CCCAAAATCATCCAAAGTAG+TGG 0.535258 4.3:-52935259 None:intergenic
ATAATGAAGTGAAGAACCAT+TGG 0.547695 4.3:+52935019 MS.gene45308:CDS
GTGGGAAGAGTTGTAGACTT+AGG 0.560267 4.3:+52934863 MS.gene45308:CDS
AAACTTTACTCAACAAGAAG+AGG 0.563987 4.3:+52934921 MS.gene45308:CDS
AAATGGGGATAAAGGGCCCT+TGG 0.573461 4.3:-52935193 None:intergenic
GATATTTCCAACACACCAAG+TGG 0.595510 4.3:+52935330 MS.gene45308:CDS
TCTTAAGAGAAGTATGCCAA+TGG 0.614883 4.3:-52935035 None:intergenic
AAAGATGTCAGCAATTGTGT+TGG 0.616881 4.3:-52935519 None:intergenic
TTCACTAGATGATGAAAATG+GGG 0.618182 4.3:-52935208 None:intergenic
GAAATTATTGAACCCACACA+AGG 0.622478 4.3:+52935114 MS.gene45308:CDS
TCAGCAATTGTGTTGGAACG+TGG 0.632729 4.3:-52935512 None:intergenic
TTCCCAAATCTCAGACACCA+AGG 0.638261 4.3:+52935176 MS.gene45308:CDS
GAATAGATGGTCGACCATTG+CGG 0.650619 4.3:+52934975 MS.gene45308:CDS
GGAACTGTGATATGAAGATG+TGG 0.659577 4.3:-52935238 None:intergenic
TCCCAAATCTCAGACACCAA+GGG 0.664108 4.3:+52935177 MS.gene45308:CDS
GGAAGAGTTGTAGACTTAGG+TGG 0.671039 4.3:+52934866 MS.gene45308:CDS
CAGCAATTGTGTTGGAACGT+GGG 0.689433 4.3:-52935511 None:intergenic
AAATTATTGAACCCACACAA+GGG 0.718502 4.3:+52935115 MS.gene45308:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCAATAATTTCTTTTGATT+TGG - chr4.3:52935106-52935125 None:intergenic 15.0%
!! CTATAGTATATGATGATATT+TGG + chr4.3:52935565-52935584 MS.gene45308:CDS 20.0%
!! GGTAATTAATATATAGAACT+TGG + chr4.3:52934730-52934749 MS.gene45308:intron 20.0%
!!! AATAATTTCTTTTGATTTGG+TGG - chr4.3:52935103-52935122 None:intergenic 20.0%
!!! ATTTCATTGTTTTTGATTTC+AGG + chr4.3:52934829-52934848 MS.gene45308:intron 20.0%
! AATTCACTAGATGATGAAAA+TGG - chr4.3:52935213-52935232 None:intergenic 25.0%
! ATATTAATTACCTGCAAACT+TGG - chr4.3:52934722-52934741 None:intergenic 25.0%
! ATCCATAACAAAACTTTCAT+TGG - chr4.3:52935409-52935428 None:intergenic 25.0%
! ATGATTCTTGTGAAAAATTG+TGG + chr4.3:52934781-52934800 MS.gene45308:intron 25.0%
! ATTCACTAGATGATGAAAAT+GGG - chr4.3:52935212-52935231 None:intergenic 25.0%
! GAAAAATATTCAGATTCCAA+CGG - chr4.3:52935546-52935565 None:intergenic 25.0%
! GGATTCATTTATAAAAGATG+TGG + chr4.3:52935287-52935306 MS.gene45308:CDS 25.0%
! TATTAATTACCTGCAAACTT+GGG - chr4.3:52934721-52934740 None:intergenic 25.0%
!! AAGTTTCCTCTTTTGATATT+AGG - chr4.3:52934907-52934926 None:intergenic 25.0%
!!! TTTGTTATGGATAACGATTT+TGG + chr4.3:52935417-52935436 MS.gene45308:CDS 25.0%
AAACTTTACTCAACAAGAAG+AGG + chr4.3:52934921-52934940 MS.gene45308:CDS 30.0%
AAATTATTGAACCCACACAA+GGG + chr4.3:52935115-52935134 MS.gene45308:CDS 30.0%
ATAAAAAGCTTGGGAATAGA+TGG + chr4.3:52934962-52934981 MS.gene45308:CDS 30.0%
ATAATGAAGTGAAGAACCAT+TGG + chr4.3:52935019-52935038 MS.gene45308:CDS 30.0%
ATGATGAAAATGGGGATAAA+GGG - chr4.3:52935203-52935222 None:intergenic 30.0%
TTCACTAGATGATGAAAATG+GGG - chr4.3:52935211-52935230 None:intergenic 30.0%
TTGAGGAGTAATTTGGTAAA+TGG - chr4.3:52935151-52935170 None:intergenic 30.0%
! AAGATGTGGATGAAAACTTT+TGG + chr4.3:52935301-52935320 MS.gene45308:CDS 30.0%
! AAGCTTTTTAGATGCTTACA+AGG + chr4.3:52935440-52935459 MS.gene45308:CDS 30.0%
!! TTGTTTTGTACTATTCCACT+TGG - chr4.3:52935348-52935367 None:intergenic 30.0%
!!! GTCCAATGAAAGTTTTGTTA+TGG + chr4.3:52935404-52935423 MS.gene45308:CDS 30.0%
!!! TTCTTTTGATTTGGTGGATT+TGG - chr4.3:52935097-52935116 None:intergenic 30.0%
!!! TTTTGATTTCAGGTCTTTCA+AGG + chr4.3:52934839-52934858 MS.gene45308:intron 30.0%
AAAGATGTCAGCAATTGTGT+TGG - chr4.3:52935522-52935541 None:intergenic 35.0%
AACTGGATTGAGGAGTAATT+TGG - chr4.3:52935158-52935177 None:intergenic 35.0%
ACTTCATTATCTGTTCTTCC+AGG - chr4.3:52935009-52935028 None:intergenic 35.0%
ATATCACAGTTCCACTACTT+TGG + chr4.3:52935248-52935267 MS.gene45308:CDS 35.0%
ATCCGAATGCATAAAAAGCT+TGG + chr4.3:52934952-52934971 MS.gene45308:CDS 35.0%
CTTAGGCCTAATATCAAAAG+AGG + chr4.3:52934898-52934917 MS.gene45308:CDS 35.0%
GAAATTATTGAACCCACACA+AGG + chr4.3:52935114-52935133 MS.gene45308:CDS 35.0%
GATGATGAAAATGGGGATAA+AGG - chr4.3:52935204-52935223 None:intergenic 35.0%
TCCGAATGCATAAAAAGCTT+GGG + chr4.3:52934953-52934972 MS.gene45308:CDS 35.0%
TTAGGTGGCTGAATTATCTT+AGG + chr4.3:52934881-52934900 MS.gene45308:CDS 35.0%
! CCACTACTTTGGATGATTTT+GGG + chr4.3:52935259-52935278 MS.gene45308:CDS 35.0%
! TCCACTACTTTGGATGATTT+TGG + chr4.3:52935258-52935277 MS.gene45308:CDS 35.0%
! TCCCAAGCTTTTTATGCATT+CGG - chr4.3:52934957-52934976 None:intergenic 35.0%
! TCTTAAGAGAAGTATGCCAA+TGG - chr4.3:52935038-52935057 None:intergenic 35.0%
! TTTTTGGACACAACCATATG+AGG + chr4.3:52935479-52935498 MS.gene45308:CDS 35.0%
!!! AGTCAGCAGTTGATAGTTTT+TGG + chr4.3:52935463-52935482 MS.gene45308:CDS 35.0%
!!! TTTGGATGATTTTGGGTTTC+TGG + chr4.3:52935266-52935285 MS.gene45308:CDS 35.0%
AAAGTCCAAGATCCAACTTC+AGG - chr4.3:52934757-52934776 None:intergenic 40.0%
ACTTTCATTGGACGAATGAC+CGG - chr4.3:52935397-52935416 None:intergenic 40.0%
ATAGAACTTGGACCTGAAGT+TGG + chr4.3:52934742-52934761 MS.gene45308:intron 40.0%
ATCTGTTCTTCCAGGTAACT+CGG - chr4.3:52935001-52935020 None:intergenic 40.0%
ATGTCACTAGATATGGTTGC+TGG + chr4.3:52934680-52934699 MS.gene45308:CDS 40.0%
CCCAAAATCATCCAAAGTAG+TGG - chr4.3:52935262-52935281 None:intergenic 40.0%
CTAGATATGGTTGCTGGAAT+TGG + chr4.3:52934686-52934705 MS.gene45308:CDS 40.0%
GATATATCTCTCCCTTGTGT+GGG - chr4.3:52935129-52935148 None:intergenic 40.0%
GATATTTCCAACACACCAAG+TGG + chr4.3:52935330-52935349 MS.gene45308:CDS 40.0%
GGAACTGTGATATGAAGATG+TGG - chr4.3:52935241-52935260 None:intergenic 40.0%
! ATTTCAGGTCTTTCAAGGTG+TGG + chr4.3:52934844-52934863 MS.gene45308:intron 40.0%
! TTTCAGGTCTTTCAAGGTGT+GGG + chr4.3:52934845-52934864 MS.gene45308:intron 40.0%
!! TACTATTCCACTTGGTGTGT+TGG - chr4.3:52935340-52935359 None:intergenic 40.0%
!!! GATGCTTTTTTAGTGTCTCC+CGG + chr4.3:52935375-52935394 MS.gene45308:CDS 40.0%
ATTGCTGACATCTTTGCCGT+TGG + chr4.3:52935527-52935546 MS.gene45308:CDS 45.0%
CAGCAATTGTGTTGGAACGT+GGG - chr4.3:52935514-52935533 None:intergenic 45.0%
CTTTCATTGGACGAATGACC+GGG - chr4.3:52935396-52935415 None:intergenic 45.0%
GAATAGATGGTCGACCATTG+CGG + chr4.3:52934975-52934994 MS.gene45308:CDS 45.0%
GAGATTTGGGAACTGGATTG+AGG - chr4.3:52935168-52935187 None:intergenic 45.0%
GGAAGAGTTGTAGACTTAGG+TGG + chr4.3:52934866-52934885 MS.gene45308:CDS 45.0%
GGATATATCTCTCCCTTGTG+TGG - chr4.3:52935130-52935149 None:intergenic 45.0%
GTGGGAAGAGTTGTAGACTT+AGG + chr4.3:52934863-52934882 MS.gene45308:CDS 45.0%
TACCTGCAAACTTGGGAAGT+TGG - chr4.3:52934714-52934733 None:intergenic 45.0%
TCAGCAATTGTGTTGGAACG+TGG - chr4.3:52935515-52935534 None:intergenic 45.0%
TCCCAAATCTCAGACACCAA+GGG + chr4.3:52935177-52935196 MS.gene45308:CDS 45.0%
TGGGACATGTCATCCTCATA+TGG - chr4.3:52935495-52935514 None:intergenic 45.0%
TTCCCAAATCTCAGACACCA+AGG + chr4.3:52935176-52935195 MS.gene45308:CDS 45.0%
TTGGACCTGAAGTTGGATCT+TGG + chr4.3:52934749-52934768 MS.gene45308:intron 45.0%
AAATGGGGATAAAGGGCCCT+TGG - chr4.3:52935196-52935215 None:intergenic 50.0%
! GGTGTCTGAGATTTGGGAAC+TGG - chr4.3:52935175-52935194 None:intergenic 50.0%
!! GCCCTTGGTGTCTGAGATTT+GGG - chr4.3:52935181-52935200 None:intergenic 50.0%
CGCCAACTTCCCAAGTTTGC+AGG + chr4.3:52934709-52934728 MS.gene45308:intron 55.0%
!! GGCCCTTGGTGTCTGAGATT+TGG - chr4.3:52935182-52935201 None:intergenic 55.0%
ACCATTGCGGCCGAGTTACC+TGG + chr4.3:52934988-52935007 MS.gene45308:CDS 60.0%
TCCAGGTAACTCGGCCGCAA+TGG - chr4.3:52934992-52935011 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 52934680 52935593 52934680 ID=MS.gene45308
chr4.3 mRNA 52934680 52935593 52934680 ID=MS.gene45308.t1;Parent=MS.gene45308
chr4.3 exon 52934680 52934722 52934680 ID=MS.gene45308.t1.exon1;Parent=MS.gene45308.t1
chr4.3 CDS 52934680 52934722 52934680 ID=cds.MS.gene45308.t1;Parent=MS.gene45308.t1
chr4.3 exon 52934851 52935593 52934851 ID=MS.gene45308.t1.exon2;Parent=MS.gene45308.t1
chr4.3 CDS 52934851 52935593 52934851 ID=cds.MS.gene45308.t1;Parent=MS.gene45308.t1
Gene Sequence

>MS.gene45308

ATGTCACTAGATATGGTTGCTGGAATTGGCGCCAACTTCCCAAGTTTGCAGGTAATTAATATATAGAACTTGGACCTGAAGTTGGATCTTGGACTTTGATGATGATTCTTGTGAAAAATTGTGGTCAAATAACATAAAATTTACTCACTATTTCATTGTTTTTGATTTCAGGTCTTTCAAGGTGTGGGAAGAGTTGTAGACTTAGGTGGCTGAATTATCTTAGGCCTAATATCAAAAGAGGAAACTTTACTCAACAAGAAGAGGAGTTGATTATCCGAATGCATAAAAAGCTTGGGAATAGATGGTCGACCATTGCGGCCGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAACCATTGGCATACTTCTCTTAAGAAGAGAGCTATAGATAACATAGTCACAAATGAAGAAACCAAATCCACCAAATCAAAAGAAATTATTGAACCCACACAAGGGAGAGATATATCCATTTACCAAATTACTCCTCAATCCAGTTCCCAAATCTCAGACACCAAGGGCCCTTTATCCCCATTTTCATCATCTAGTGAATTCTCTTCCACATCTTCATATCACAGTTCCACTACTTTGGATGATTTTGGGTTTCTGGATTCATTTATAAAAGATGTGGATGAAAACTTTTGGCTTAATGATATTTCCAACACACCAAGTGGAATAGTACAAAACAATACTAATGATGCTTTTTTAGTGTCTCCCGGTCATTCGTCCAATGAAAGTTTTGTTATGGATAACGATTTTGGAAGCTTTTTAGATGCTTACAAGGAGTCAGCAGTTGATAGTTTTTGGACACAACCATATGAGGATGACATGTCCCACGTTCCAACACAATTGCTGACATCTTTGCCGTTGGAATCTGAATATTTTTCTATAGTATATGATGATATTTGGAGTTGA
Protein sequence

>MS.gene45308.t1

MSLDMVAGIGANFPSLSRCGKSCRLRWLNYLRPNIKRGNFTQQEEELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNIVTNEETKSTKSKEIIEPTQGRDISIYQITPQSSSQISDTKGPLSPFSSSSEFSSTSSYHSSTTLDDFGFLDSFIKDVDENFWLNDISNTPSGIVQNNTNDAFLVSPGHSSNESFVMDNDFGSFLDAYKESAVDSFWTQPYEDDMSHVPTQLLTSLPLESEYFSIVYDDIWS