Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45562.t1 | XP_003616034.2 | 96.6 | 703 | 24 | 0 | 1 | 703 | 1 | 703 | 0.00E+00 | 1351.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45562.t1 | Q6Z3U3 | 42.1 | 780 | 351 | 15 | 6 | 703 | 17 | 777 | 9.2e-138 | 492.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45562.t1 | G7K0T7 | 96.6 | 703 | 24 | 0 | 1 | 703 | 1 | 703 | 0.0e+00 | 1351.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene45562.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45562.t1 | MTR_5g075410 | 96.586 | 703 | 24 | 0 | 1 | 703 | 1 | 703 | 0.0 | 1418 |
| MS.gene45562.t1 | MTR_3g467380 | 57.274 | 763 | 259 | 12 | 1 | 703 | 1 | 756 | 0.0 | 796 |
| MS.gene45562.t1 | MTR_4g028130 | 43.576 | 755 | 352 | 9 | 1 | 703 | 1 | 733 | 0.0 | 583 |
| MS.gene45562.t1 | MTR_4g028130 | 42.119 | 755 | 327 | 9 | 1 | 703 | 1 | 697 | 0.0 | 551 |
| MS.gene45562.t1 | MTR_4g028130 | 45.008 | 591 | 291 | 7 | 1 | 578 | 1 | 570 | 1.50e-160 | 478 |
| MS.gene45562.t1 | MTR_2g011940 | 43.723 | 462 | 175 | 8 | 283 | 703 | 305 | 722 | 1.52e-106 | 345 |
| MS.gene45562.t1 | MTR_2g011940 | 43.066 | 137 | 60 | 5 | 6 | 135 | 22 | 147 | 3.10e-23 | 105 |
| MS.gene45562.t1 | MTR_2g011940 | 47.138 | 297 | 117 | 4 | 283 | 578 | 314 | 571 | 2.97e-78 | 263 |
| MS.gene45562.t1 | MTR_2g011940 | 42.424 | 132 | 68 | 4 | 6 | 135 | 31 | 156 | 2.32e-23 | 105 |
| MS.gene45562.t1 | MTR_2g011940 | 47.138 | 297 | 117 | 4 | 283 | 578 | 314 | 571 | 5.21e-78 | 263 |
| MS.gene45562.t1 | MTR_2g011940 | 42.424 | 132 | 68 | 4 | 6 | 135 | 31 | 156 | 2.95e-23 | 105 |
| MS.gene45562.t1 | MTR_7g073240 | 49.189 | 185 | 89 | 3 | 254 | 434 | 52 | 235 | 2.95e-51 | 182 |
| MS.gene45562.t1 | MTR_7g073240 | 54.054 | 74 | 33 | 1 | 506 | 578 | 245 | 318 | 2.95e-16 | 81.6 |
| MS.gene45562.t1 | MTR_7g083700 | 48.235 | 85 | 43 | 1 | 321 | 404 | 126 | 210 | 1.08e-18 | 88.2 |
| MS.gene45562.t1 | MTR_7g059330 | 39.216 | 102 | 60 | 2 | 321 | 420 | 623 | 724 | 1.71e-15 | 80.9 |
| MS.gene45562.t1 | MTR_1g058350 | 37.037 | 135 | 64 | 6 | 302 | 422 | 54 | 181 | 6.67e-15 | 77.0 |
| MS.gene45562.t1 | MTR_5g053920 | 41.818 | 110 | 47 | 4 | 321 | 417 | 194 | 299 | 3.32e-14 | 75.5 |
| MS.gene45562.t1 | MTR_7g117455 | 38.462 | 91 | 51 | 3 | 321 | 408 | 117 | 205 | 2.25e-13 | 73.6 |
| MS.gene45562.t1 | MTR_7g105370 | 41.176 | 102 | 50 | 5 | 326 | 421 | 65 | 162 | 6.89e-13 | 70.5 |
| MS.gene45562.t1 | MTR_1g093600 | 31.429 | 140 | 76 | 5 | 321 | 442 | 191 | 328 | 1.66e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45562.t1 | AT4G32010 | 40.915 | 743 | 314 | 14 | 3 | 703 | 4 | 663 | 2.56e-174 | 518 |
| MS.gene45562.t1 | AT4G32010 | 40.696 | 747 | 314 | 15 | 3 | 703 | 4 | 667 | 2.77e-172 | 513 |
| MS.gene45562.t1 | AT2G30470 | 42.282 | 745 | 325 | 18 | 1 | 703 | 6 | 687 | 2.21e-167 | 500 |
| MS.gene45562.t1 | AT4G21550 | 33.333 | 453 | 260 | 10 | 3 | 437 | 14 | 442 | 3.34e-69 | 236 |
| MS.gene45562.t1 | AT4G21550 | 33.481 | 451 | 258 | 10 | 5 | 437 | 16 | 442 | 1.24e-68 | 235 |
| MS.gene45562.t1 | AT4G21550 | 33.333 | 453 | 260 | 10 | 3 | 437 | 14 | 442 | 5.77e-68 | 237 |
| MS.gene45562.t1 | AT3G26790 | 45.882 | 85 | 45 | 1 | 321 | 404 | 91 | 175 | 4.81e-18 | 86.3 |
| MS.gene45562.t1 | AT3G24650 | 41.176 | 102 | 58 | 2 | 321 | 420 | 571 | 672 | 5.76e-16 | 82.4 |
| MS.gene45562.t1 | AT1G28300 | 41.000 | 100 | 57 | 2 | 321 | 419 | 170 | 268 | 1.40e-15 | 79.3 |
| MS.gene45562.t1 | AT5G06250 | 35.135 | 148 | 73 | 6 | 310 | 439 | 37 | 179 | 2.11e-15 | 77.4 |
| MS.gene45562.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 321 | 421 | 37 | 142 | 2.54e-15 | 75.1 |
| MS.gene45562.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 321 | 421 | 37 | 142 | 2.54e-15 | 75.1 |
| MS.gene45562.t1 | AT5G06250 | 35.135 | 148 | 73 | 6 | 310 | 439 | 37 | 179 | 2.55e-15 | 77.4 |
| MS.gene45562.t1 | AT4G01500 | 43.820 | 89 | 47 | 2 | 321 | 408 | 35 | 121 | 2.69e-15 | 78.2 |
| MS.gene45562.t1 | AT5G06250 | 35.135 | 148 | 73 | 6 | 310 | 439 | 37 | 179 | 2.88e-15 | 77.0 |
| MS.gene45562.t1 | AT5G06250 | 35.135 | 148 | 73 | 6 | 310 | 439 | 37 | 179 | 3.21e-15 | 77.0 |
| MS.gene45562.t1 | AT5G06250 | 35.135 | 148 | 73 | 6 | 310 | 439 | 37 | 179 | 4.03e-15 | 76.6 |
| MS.gene45562.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 321 | 421 | 37 | 142 | 6.84e-15 | 75.5 |
| MS.gene45562.t1 | AT2G46870 | 40.659 | 91 | 49 | 3 | 321 | 408 | 34 | 122 | 7.71e-15 | 76.6 |
| MS.gene45562.t1 | AT1G13260 | 42.391 | 92 | 47 | 3 | 321 | 408 | 187 | 276 | 7.94e-15 | 77.0 |
| MS.gene45562.t1 | AT3G25730 | 38.318 | 107 | 57 | 4 | 321 | 420 | 182 | 286 | 3.30e-14 | 75.1 |
| MS.gene45562.t1 | AT2G36080 | 39.815 | 108 | 56 | 4 | 321 | 421 | 37 | 142 | 4.72e-14 | 72.8 |
| MS.gene45562.t1 | AT3G61970 | 38.298 | 94 | 50 | 3 | 321 | 408 | 22 | 113 | 6.36e-14 | 73.6 |
| MS.gene45562.t1 | AT1G68840 | 40.860 | 93 | 48 | 3 | 321 | 408 | 187 | 277 | 1.94e-13 | 72.8 |
| MS.gene45562.t1 | AT1G68840 | 40.860 | 93 | 48 | 3 | 321 | 408 | 187 | 277 | 1.94e-13 | 72.8 |
| MS.gene45562.t1 | AT1G01030 | 40.860 | 93 | 46 | 4 | 321 | 408 | 55 | 143 | 4.60e-13 | 71.6 |
| MS.gene45562.t1 | AT1G01030 | 40.860 | 93 | 46 | 4 | 321 | 408 | 55 | 143 | 5.07e-13 | 71.6 |
| MS.gene45562.t1 | AT3G11580 | 36.752 | 117 | 55 | 5 | 321 | 421 | 28 | 141 | 8.29e-13 | 69.7 |
| MS.gene45562.t1 | AT3G11580 | 36.752 | 117 | 55 | 5 | 321 | 421 | 28 | 141 | 3.21e-12 | 67.4 |
| MS.gene45562.t1 | AT3G11580 | 36.752 | 117 | 55 | 5 | 321 | 421 | 28 | 141 | 3.21e-12 | 67.4 |
| MS.gene45562.t1 | AT3G11580 | 36.752 | 117 | 55 | 5 | 321 | 421 | 28 | 141 | 3.21e-12 | 67.4 |
| MS.gene45562.t1 | AT3G11580 | 36.752 | 117 | 55 | 5 | 321 | 421 | 28 | 141 | 1.04e-11 | 67.8 |
Find 178 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCAATTGTTACAATATT+TGG | 0.086549 | 5.3:+60220582 | None:intergenic |
| ATTCAAGAACACAAGCTTTC+AGG | 0.213336 | 5.3:-60219649 | MS.gene45562:CDS |
| CACTTAACTTCTTCGGTCTT+TGG | 0.232028 | 5.3:+60222428 | None:intergenic |
| ACTTAACACCTTCTCAAATA+AGG | 0.237548 | 5.3:+60221590 | None:intergenic |
| CCCGCATTTGTTGCAGAGTT+TGG | 0.256841 | 5.3:+60224105 | None:intergenic |
| TTCTAACGGCATTTCGATAA+AGG | 0.267420 | 5.3:-60220943 | MS.gene45562:CDS |
| ATCAGTTACTTTCTCGATAC+TGG | 0.269074 | 5.3:-60222049 | MS.gene45562:CDS |
| TTTACAGTTCCAAGATATAA+TGG | 0.271409 | 5.3:-60221364 | MS.gene45562:CDS |
| TATACCTCAGCACACGCTTT+TGG | 0.274011 | 5.3:+60221531 | None:intergenic |
| TGAAGACTTTCTTGTTCCTT+TGG | 0.285526 | 5.3:+60220059 | None:intergenic |
| AAGAAGAGGTCTCGCAATAT+TGG | 0.296576 | 5.3:-60220708 | MS.gene45562:CDS |
| TACATCCTACTGTTGTTATT+AGG | 0.308177 | 5.3:+60221309 | None:intergenic |
| AACGGGGAACCTTACTTAAA+TGG | 0.309832 | 5.3:-60220843 | MS.gene45562:CDS |
| CAATTAAATGCTGGTGATAC+TGG | 0.325898 | 5.3:-60221249 | MS.gene45562:intron |
| AATGTAGTAAATGCTGTTAA+AGG | 0.330641 | 5.3:+60222353 | None:intergenic |
| CATCATATTCTTCAAATACT+TGG | 0.347609 | 5.3:+60220559 | None:intergenic |
| TTACAGTTCCAAGATATAAT+GGG | 0.352438 | 5.3:-60221363 | MS.gene45562:CDS |
| CCTCAGAATTTGAACTCATT+AGG | 0.359994 | 5.3:-60220900 | MS.gene45562:CDS |
| AGGATACTGAAAATCATAAT+AGG | 0.362554 | 5.3:-60222628 | MS.gene45562:CDS |
| GCAAACATCTCAGTCTATAT+TGG | 0.370039 | 5.3:-60222171 | MS.gene45562:CDS |
| AAATTCCACCGTCATGAAAC+TGG | 0.376289 | 5.3:-60223018 | MS.gene45562:CDS |
| TTCAATCAATGAAAGGTAAC+GGG | 0.377988 | 5.3:-60220860 | MS.gene45562:CDS |
| CTTGTTCCTTTGGACCGAGC+TGG | 0.382544 | 5.3:+60220069 | None:intergenic |
| TGAGGTGCACCAGAAAAGTT+TGG | 0.383323 | 5.3:+60220918 | None:intergenic |
| GATGGCATGGTTTCATGTAT+TGG | 0.390905 | 5.3:-60222452 | MS.gene45562:CDS |
| AAAACCAGTGCCTCTCCATC+AGG | 0.394979 | 5.3:-60220417 | MS.gene45562:CDS |
| ACATTCAGAACATCTGCGTT+TGG | 0.398523 | 5.3:-60220820 | MS.gene45562:CDS |
| GAACATCTGCGTTTGGGTAA+TGG | 0.398608 | 5.3:-60220813 | MS.gene45562:CDS |
| CAATGGTCCATTGCAGCAAC+TGG | 0.398704 | 5.3:-60220745 | MS.gene45562:CDS |
| CAATTCTACACAACTGCATA+AGG | 0.399404 | 5.3:+60222516 | None:intergenic |
| CCGAGTGATGCAGGTCGAAT+TGG | 0.400991 | 5.3:-60221567 | MS.gene45562:CDS |
| CATTCAGAACATCTGCGTTT+GGG | 0.404927 | 5.3:-60220819 | MS.gene45562:CDS |
| AACAATGCAAGTGATCGATA+TGG | 0.408713 | 5.3:-60222587 | MS.gene45562:CDS |
| ATGAGTCTTGAAACAAATAA+AGG | 0.410706 | 5.3:-60222122 | MS.gene45562:CDS |
| AGAAGAGGTCTCGCAATATT+GGG | 0.416834 | 5.3:-60220707 | MS.gene45562:CDS |
| CTGCCGTTGGCCACTGAGAT+TGG | 0.423759 | 5.3:-60222239 | MS.gene45562:CDS |
| TAAGCCCTCCCAGCTTTGTC+TGG | 0.424644 | 5.3:-60222785 | MS.gene45562:intron |
| TCGTTCGAGTACCTTGATTT+CGG | 0.425356 | 5.3:-60222832 | MS.gene45562:CDS |
| AGGCAAGGCAAGTGCATGTC+GGG | 0.425926 | 5.3:+60219470 | None:intergenic |
| ACTCGTTCCCCATTATATCT+TGG | 0.426035 | 5.3:+60221355 | None:intergenic |
| CTTAACACCTTCTCAAATAA+GGG | 0.428464 | 5.3:+60221591 | None:intergenic |
| GAATTGACACTTAACTTCTT+CGG | 0.430100 | 5.3:+60222421 | None:intergenic |
| TCTGAATGTCCATTTAAGTA+AGG | 0.433067 | 5.3:+60220834 | None:intergenic |
| CTTATGCAGTTGTGTAGAAT+TGG | 0.437808 | 5.3:-60222515 | MS.gene45562:CDS |
| CAACAGTAGGATGTATGTAT+TGG | 0.441536 | 5.3:-60221301 | MS.gene45562:CDS |
| CTCTTTGAGCTTGTGACCAA+CGG | 0.442148 | 5.3:+60222474 | None:intergenic |
| GGGTGGTCTTTGATCTCTGG+TGG | 0.449691 | 5.3:-60224133 | MS.gene45562:CDS |
| ACATTTAGTCGGATAGATCC+TGG | 0.451349 | 5.3:-60221146 | MS.gene45562:CDS |
| CCAGCTGACGACGACTCGTC+AGG | 0.453820 | 5.3:+60219577 | None:intergenic |
| CAAGAGCTGGAGAAATTGTC+GGG | 0.454716 | 5.3:-60222011 | MS.gene45562:CDS |
| AAAGGGTGGTCTTTGATCTC+TGG | 0.456650 | 5.3:-60224136 | MS.gene45562:CDS |
| ACAGAAAAGTGAATTCTCAT+AGG | 0.458212 | 5.3:+60223044 | None:intergenic |
| CTGCATTGGCAAGAGCATCT+AGG | 0.465149 | 5.3:+60219626 | None:intergenic |
| ATGAATAATTATTGTAAGGA+AGG | 0.465785 | 5.3:-60224178 | MS.gene45562:CDS |
| TATTGTAAGGAAGGTTCAAC+CGG | 0.468693 | 5.3:-60224169 | MS.gene45562:CDS |
| CCTGACGAGTCGTCGTCAGC+TGG | 0.478183 | 5.3:-60219577 | MS.gene45562:CDS |
| AAGAAATTCTGTTCTGCCGT+TGG | 0.479555 | 5.3:-60222252 | MS.gene45562:CDS |
| CCAAACTCTGCAACAAATGC+GGG | 0.482509 | 5.3:-60224105 | MS.gene45562:intron |
| TGGGTAATGGAACTGCTGAT+TGG | 0.484375 | 5.3:-60220800 | MS.gene45562:CDS |
| TTTATTTGTTTCAAGACTCA+TGG | 0.486601 | 5.3:+60222124 | None:intergenic |
| CTATGGAATTGAGACTTACA+TGG | 0.489129 | 5.3:-60220647 | MS.gene45562:CDS |
| ACAATATTTGGCTTGACACT+AGG | 0.490295 | 5.3:+60220594 | None:intergenic |
| TTTAACAGCATTTACTACAT+TGG | 0.491046 | 5.3:-60222351 | MS.gene45562:CDS |
| GCATCGTAAGGCTCTTGAAC+CGG | 0.491358 | 5.3:+60219431 | None:intergenic |
| GCCAAATATTGTAACAATTG+AGG | 0.493508 | 5.3:-60220583 | MS.gene45562:CDS |
| CCTTCACATCAGCAGGTGGC+CGG | 0.497637 | 5.3:+60222078 | None:intergenic |
| CATTCATAGCGAAGATGCTA+TGG | 0.498765 | 5.3:-60220664 | MS.gene45562:CDS |
| GTGTATGAATAATTATTGTA+AGG | 0.498958 | 5.3:-60224182 | MS.gene45562:CDS |
| CATTCAACCACCGAGTGGAC+AGG | 0.499377 | 5.3:-60219503 | MS.gene45562:CDS |
| ATTGCCTAAAACTGCTGCAT+TGG | 0.500146 | 5.3:+60219612 | None:intergenic |
| AACTTATACCACCGAAATCA+AGG | 0.500512 | 5.3:+60222821 | None:intergenic |
| CCGGCCACCTGCTGATGTGA+AGG | 0.500794 | 5.3:-60222078 | MS.gene45562:CDS |
| GTGTTAAGTCCGAGTGATGC+AGG | 0.501935 | 5.3:-60221576 | MS.gene45562:CDS |
| TCAGCAGGTGGCCGGCGTGG+TGG | 0.502029 | 5.3:+60222086 | None:intergenic |
| GGTGGTCTTTGATCTCTGGT+GGG | 0.503585 | 5.3:-60224132 | MS.gene45562:CDS |
| TCAAGAGCTGGAGAAATTGT+CGG | 0.505861 | 5.3:-60222012 | MS.gene45562:CDS |
| CAGTAGGATGTATGTATTGG+AGG | 0.506980 | 5.3:-60221298 | MS.gene45562:CDS |
| TTACCCTGATGGAGAGGCAC+TGG | 0.511162 | 5.3:+60220413 | None:intergenic |
| ATTATATCTTGGAACTGTAA+AGG | 0.513021 | 5.3:+60221366 | None:intergenic |
| CCACCCTTTCTTCCATTCAC+CGG | 0.514165 | 5.3:+60224150 | None:intergenic |
| CGGCCACCTGCTGATGTGAA+GGG | 0.515875 | 5.3:-60222077 | MS.gene45562:CDS |
| TTAACCTTACCAGACAAAGC+TGG | 0.516700 | 5.3:+60222776 | None:intergenic |
| CTTCAATCAATGAAAGGTAA+CGG | 0.516842 | 5.3:-60220861 | MS.gene45562:CDS |
| AGGAAGGTTCAACCGGTGAA+TGG | 0.518576 | 5.3:-60224162 | MS.gene45562:CDS |
| ATTGGAGAAGGTAAACTTGA+GGG | 0.521191 | 5.3:-60222221 | MS.gene45562:CDS |
| AGCTCTTGATCAGTAATCCT+TGG | 0.521679 | 5.3:+60222026 | None:intergenic |
| GGTATATAATCTTACCCTGA+TGG | 0.522702 | 5.3:+60220402 | None:intergenic |
| AAACATCCGAGGCATCGTCC+TGG | 0.526966 | 5.3:-60219544 | MS.gene45562:CDS |
| TCAACCGGTGAATGGAAGAA+AGG | 0.528331 | 5.3:-60224154 | MS.gene45562:CDS |
| CGATATGGTGAACATATTGA+TGG | 0.528805 | 5.3:-60222572 | MS.gene45562:CDS |
| TTGTTACAGTAACATTTAGT+CGG | 0.530093 | 5.3:-60221157 | MS.gene45562:intron |
| TGAAACGCTTTCACTAAAGA+TGG | 0.532158 | 5.3:-60222291 | MS.gene45562:CDS |
| CCAATTCGACCTGCATCACT+CGG | 0.532323 | 5.3:+60221567 | None:intergenic |
| TTTCAGTTTCAGAGAAGAAG+AGG | 0.532408 | 5.3:-60220722 | MS.gene45562:CDS |
| AATCTTCTTCAATCAATGAA+AGG | 0.533019 | 5.3:-60220867 | MS.gene45562:CDS |
| ACTGAAACCAGTTGCTGCAA+TGG | 0.534324 | 5.3:+60220738 | None:intergenic |
| TTGGCTCAACTATCAAAGAC+TGG | 0.539999 | 5.3:-60222152 | MS.gene45562:CDS |
| ATCACCAGCATTTAATTGCA+AGG | 0.546441 | 5.3:+60221254 | None:intergenic |
| CAGTCCTTGCAATTAAATGC+TGG | 0.547662 | 5.3:-60221258 | MS.gene45562:CDS |
| AGACTACTGGTGGAACAAGC+TGG | 0.549005 | 5.3:-60222548 | MS.gene45562:CDS |
| TAACCTTACCAGACAAAGCT+GGG | 0.549034 | 5.3:+60222777 | None:intergenic |
| GTGCATCCAGGACGATGCCT+CGG | 0.549949 | 5.3:+60219538 | None:intergenic |
| TACTTTCTCGATACTGGCCA+AGG | 0.550936 | 5.3:-60222043 | MS.gene45562:CDS |
| CCGGCGCTTAAGAGTCTCAC+AGG | 0.559293 | 5.3:+60219450 | None:intergenic |
| TGTAGTGCCCTTATTTGAGA+AGG | 0.560033 | 5.3:-60221598 | MS.gene45562:CDS |
| ATTGACTTCTGTTGTTACAC+AGG | 0.561453 | 5.3:-60221093 | MS.gene45562:intron |
| CAACCGGTGAATGGAAGAAA+GGG | 0.563252 | 5.3:-60224153 | MS.gene45562:CDS |
| TCCATCCAGTTTCATGACGG+TGG | 0.564496 | 5.3:+60223013 | None:intergenic |
| AATTGCAAGGACTGTATGCA+AGG | 0.565036 | 5.3:+60221267 | None:intergenic |
| ACTATACATCCACTGTGGAT+AGG | 0.566036 | 5.3:+60222865 | None:intergenic |
| GGAAAATAATAGACCAACAT+GGG | 0.566824 | 5.3:-60222330 | MS.gene45562:CDS |
| TTATTTCATTTAGGAACCCC+CGG | 0.568626 | 5.3:-60220454 | MS.gene45562:intron |
| AAGGATTACTGATCAAGAGC+TGG | 0.569540 | 5.3:-60222024 | MS.gene45562:CDS |
| GCCAAACTCTGCAACAAATG+CGG | 0.571705 | 5.3:-60224106 | MS.gene45562:CDS |
| ATCAGACCAGCTCGGTCCAA+AGG | 0.576061 | 5.3:-60220075 | MS.gene45562:CDS |
| TCCTCCATCCAGTTTCATGA+CGG | 0.576172 | 5.3:+60223010 | None:intergenic |
| CACACGATACAAGTGCATCC+AGG | 0.576195 | 5.3:+60219526 | None:intergenic |
| TTTGGCCTAATAACAACAGT+AGG | 0.577022 | 5.3:-60221314 | MS.gene45562:CDS |
| TTCCCCTTCACATCAGCAGG+TGG | 0.578031 | 5.3:+60222074 | None:intergenic |
| TTCGAGTACCTTGATTTCGG+TGG | 0.580235 | 5.3:-60222829 | MS.gene45562:CDS |
| TAAGTGTCAATTCAACAAAG+AGG | 0.581056 | 5.3:-60222411 | MS.gene45562:CDS |
| CTTACCAGACAAAGCTGGGA+GGG | 0.582135 | 5.3:+60222781 | None:intergenic |
| ACATCAGCAGGTGGCCGGCG+TGG | 0.583280 | 5.3:+60222083 | None:intergenic |
| CCTGTGAGACTCTTAAGCGC+CGG | 0.585911 | 5.3:-60219450 | MS.gene45562:CDS |
| CATTTAGTCGGATAGATCCT+GGG | 0.586278 | 5.3:-60221145 | MS.gene45562:CDS |
| GCTTAAAACTGCACATAGTG+AGG | 0.592237 | 5.3:-60220778 | MS.gene45562:CDS |
| CCTAATGAGTTCAAATTCTG+AGG | 0.592495 | 5.3:+60220900 | None:intergenic |
| CTTTCACTAAAGATGGCTCT+AGG | 0.593793 | 5.3:-60222284 | MS.gene45562:CDS |
| ACAAGCTCAAAGAGATGGCA+TGG | 0.595112 | 5.3:-60222465 | MS.gene45562:CDS |
| CTGGTGGAACAAGCTGGCAA+AGG | 0.598804 | 5.3:-60222542 | MS.gene45562:CDS |
| TATTGATGGTAGACTACTGG+TGG | 0.600333 | 5.3:-60222558 | MS.gene45562:CDS |
| GGCCACCTGCTGATGTGAAG+GGG | 0.601780 | 5.3:-60222076 | MS.gene45562:CDS |
| TGGTCACAAGCTCAAAGAGA+TGG | 0.603653 | 5.3:-60222470 | MS.gene45562:CDS |
| CAGGCAAGGCAAGTGCATGT+CGG | 0.603970 | 5.3:+60219469 | None:intergenic |
| ACATATTGATGGTAGACTAC+TGG | 0.604398 | 5.3:-60222561 | MS.gene45562:CDS |
| TCCACCGTCATGAAACTGGA+TGG | 0.604497 | 5.3:-60223014 | MS.gene45562:CDS |
| ATTGCAAGGACTGTATGCAA+GGG | 0.607548 | 5.3:+60221268 | None:intergenic |
| ATATTGGGACGAAAACTAAG+AGG | 0.609627 | 5.3:-60220692 | MS.gene45562:CDS |
| AAGATATAATGGGGAACGAG+TGG | 0.614024 | 5.3:-60221353 | MS.gene45562:CDS |
| AGTAGGATGTATGTATTGGA+GGG | 0.615364 | 5.3:-60221297 | MS.gene45562:CDS |
| GCTTAAGAGTCTCACAGGCA+AGG | 0.617723 | 5.3:+60219455 | None:intergenic |
| TTGTGTAGAATTGGTGAAGT+CGG | 0.620883 | 5.3:-60222506 | MS.gene45562:CDS |
| TACAGTTCCAAGATATAATG+GGG | 0.621280 | 5.3:-60221362 | MS.gene45562:CDS |
| TTGGCCACTGAGATTGGAGA+AGG | 0.621905 | 5.3:-60222233 | MS.gene45562:CDS |
| AAACCAGTGCCTCTCCATCA+GGG | 0.622368 | 5.3:-60220416 | MS.gene45562:intron |
| TCTACATCTTCTCATTCTAA+CGG | 0.622522 | 5.3:-60220957 | MS.gene45562:CDS |
| ATTCAACCACCGAGTGGACA+GGG | 0.623358 | 5.3:-60219502 | MS.gene45562:CDS |
| CAGCTGACGACGACTCGTCA+GGG | 0.628337 | 5.3:+60219578 | None:intergenic |
| TGATCTCTCATCCACCACGC+CGG | 0.630532 | 5.3:-60222097 | MS.gene45562:CDS |
| ATAATCTTACCCTGATGGAG+AGG | 0.631070 | 5.3:+60220407 | None:intergenic |
| AAGTCGGTGAATCAAGCCGT+TGG | 0.642223 | 5.3:-60222490 | MS.gene45562:CDS |
| GGTTCTGCATCAGACCAGCT+CGG | 0.642711 | 5.3:-60220083 | MS.gene45562:CDS |
| TGGAAAATAATAGACCAACA+TGG | 0.644227 | 5.3:-60222331 | MS.gene45562:CDS |
| TTTGGCTTGACACTAGGCGG+CGG | 0.654279 | 5.3:+60220600 | None:intergenic |
| TCTCCAATCTCAGTGGCCAA+CGG | 0.657815 | 5.3:+60222236 | None:intergenic |
| CCTTCTGATTGCAAAATACG+AGG | 0.659510 | 5.3:+60221393 | None:intergenic |
| CCGGTGAATGGAAGAAAGGG+TGG | 0.661502 | 5.3:-60224150 | MS.gene45562:CDS |
| TTGCAAGGACTGTATGCAAG+GGG | 0.665717 | 5.3:+60221269 | None:intergenic |
| ATATTTGGCTTGACACTAGG+CGG | 0.666538 | 5.3:+60220597 | None:intergenic |
| GTTAGAATGAGAAGATGTAG+AGG | 0.666828 | 5.3:+60220959 | None:intergenic |
| TAAAACTGCACATAGTGAGG+AGG | 0.667263 | 5.3:-60220775 | MS.gene45562:CDS |
| GAAATGCAGCAATTGCAGCA+AGG | 0.667427 | 5.3:-60222989 | MS.gene45562:intron |
| GATTGGAGAAGGTAAACTTG+AGG | 0.667659 | 5.3:-60222222 | MS.gene45562:CDS |
| AAGAGCTGGAGAAATTGTCG+GGG | 0.668493 | 5.3:-60222010 | MS.gene45562:CDS |
| TTAATCTTTCCGAAAACCGG+GGG | 0.672825 | 5.3:+60220438 | None:intergenic |
| ACCGTCATGAAACTGGATGG+AGG | 0.674066 | 5.3:-60223011 | MS.gene45562:CDS |
| TTTAATCTTTCCGAAAACCG+GGG | 0.679300 | 5.3:+60220437 | None:intergenic |
| AGTGAGGAGGAAATGAACAA+TGG | 0.681817 | 5.3:-60220762 | MS.gene45562:CDS |
| TATGGAATTGAGACTTACAT+GGG | 0.685466 | 5.3:-60220646 | MS.gene45562:CDS |
| AAGCTGGGAGGGCTTAACAC+AGG | 0.686823 | 5.3:+60222792 | None:intergenic |
| GAATCACCACAAAACATCCG+AGG | 0.699635 | 5.3:-60219555 | MS.gene45562:CDS |
| TTTACCTTCTCCAATCTCAG+TGG | 0.700030 | 5.3:+60222229 | None:intergenic |
| TCAATCAATGAAAGGTAACG+GGG | 0.707345 | 5.3:-60220859 | MS.gene45562:CDS |
| GTGTGCATTCAACCACCGAG+TGG | 0.707877 | 5.3:-60219508 | MS.gene45562:CDS |
| CCTTACCAGACAAAGCTGGG+AGG | 0.709735 | 5.3:+60222780 | None:intergenic |
| AGAGCTGGAGAAATTGTCGG+GGG | 0.721199 | 5.3:-60222009 | MS.gene45562:CDS |
| GCTCCCAAAAGCGTGTGCTG+AGG | 0.736724 | 5.3:-60221535 | MS.gene45562:intron |
| TTGATACTATACATCCACTG+TGG | 0.738079 | 5.3:+60222860 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATATTTCAATATCAA+AGG | + | chr5.3:60220724-60220743 | None:intergenic | 10.0% |
| !!! | ACATATATCTAAATATTTTT+GGG | - | chr5.3:60223741-60223760 | MS.gene45562:intron | 10.0% |
| !!! | GTTTTTTATTTATTTCATTT+AGG | - | chr5.3:60223164-60223183 | MS.gene45562:intron | 10.0% |
| !!! | TACATATATCTAAATATTTT+TGG | - | chr5.3:60223740-60223759 | MS.gene45562:intron | 10.0% |
| !! | AGAATCAAATAACAAAATTT+CGG | + | chr5.3:60220911-60220930 | None:intergenic | 15.0% |
| !!! | AATGATATATTTTGGATTTT+TGG | - | chr5.3:60223107-60223126 | MS.gene45562:intron | 15.0% |
| !!! | ATTTCACAATGTTATAATTT+TGG | - | chr5.3:60219606-60219625 | MS.gene45562:CDS | 15.0% |
| !!! | CAATTTTTTTTTAGAAAACT+CGG | + | chr5.3:60220277-60220296 | None:intergenic | 15.0% |
| !!! | TTTCACAATGTTATAATTTT+GGG | - | chr5.3:60219607-60219626 | MS.gene45562:CDS | 15.0% |
| !! | AAACTGAGATAATAATGTTA+AGG | + | chr5.3:60222000-60222019 | None:intergenic | 20.0% |
| !! | AAATAAAAAAAAACGATAGC+AGG | + | chr5.3:60223615-60223634 | None:intergenic | 20.0% |
| !! | AAATCAAAATATGAAATGCT+CGG | - | chr5.3:60219860-60219879 | MS.gene45562:intron | 20.0% |
| !! | AAATCCCAAAATTATCAATT+TGG | + | chr5.3:60219661-60219680 | None:intergenic | 20.0% |
| !! | AACTGAGATAATAATGTTAA+GGG | + | chr5.3:60221999-60222018 | None:intergenic | 20.0% |
| !! | AATACAACTTTAAATATGAG+TGG | + | chr5.3:60219831-60219850 | None:intergenic | 20.0% |
| !! | ATAAATAAAAAACATAAGCC+AGG | + | chr5.3:60223157-60223176 | None:intergenic | 20.0% |
| !! | ATAATAGACCAAAATACTAA+GGG | + | chr5.3:60221935-60221954 | None:intergenic | 20.0% |
| !! | ATGAATAATTATTGTAAGGA+AGG | - | chr5.3:60219449-60219468 | MS.gene45562:CDS | 20.0% |
| !! | ATTATTCTTATTATGTACTG+TGG | - | chr5.3:60223506-60223525 | MS.gene45562:intron | 20.0% |
| !! | GAATCAAATAACAAAATTTC+GGG | + | chr5.3:60220910-60220929 | None:intergenic | 20.0% |
| !! | GTGTATGAATAATTATTGTA+AGG | - | chr5.3:60219445-60219464 | MS.gene45562:CDS | 20.0% |
| !! | TAATTAAGTACTAGTTATCA+AGG | + | chr5.3:60223880-60223899 | None:intergenic | 20.0% |
| !! | TATAATAGACCAAAATACTA+AGG | + | chr5.3:60221936-60221955 | None:intergenic | 20.0% |
| !! | TTCAAATCAAACATATGTTT+AGG | - | chr5.3:60220444-60220463 | MS.gene45562:CDS | 20.0% |
| !!! | AAACTGTGAATGATATATTT+TGG | - | chr5.3:60223099-60223118 | MS.gene45562:intron | 20.0% |
| !!! | AATTTCTATTTGGTTTTAGA+AGG | - | chr5.3:60222509-60222528 | MS.gene45562:CDS | 20.0% |
| !!! | ATTGATAATTTTGGGATTTT+AGG | - | chr5.3:60219662-60219681 | MS.gene45562:CDS | 20.0% |
| !!! | CGAGTTTTCTAAAAAAAAAT+TGG | - | chr5.3:60220275-60220294 | MS.gene45562:intron | 20.0% |
| !!! | TATCATTGAATGTTTTTCTA+TGG | - | chr5.3:60220972-60220991 | MS.gene45562:intron | 20.0% |
| !!! | TGATCCAAATTGATAATTTT+GGG | - | chr5.3:60219654-60219673 | MS.gene45562:CDS | 20.0% |
| !!! | TTCACAATGTTATAATTTTG+GGG | - | chr5.3:60219608-60219627 | MS.gene45562:CDS | 20.0% |
| !!! | TTGATCCAAATTGATAATTT+TGG | - | chr5.3:60219653-60219672 | MS.gene45562:CDS | 20.0% |
| ! | AATCTTCTTCAATCAATGAA+AGG | - | chr5.3:60222760-60222779 | MS.gene45562:intron | 25.0% |
| ! | AATGTAGTAAATGCTGTTAA+AGG | + | chr5.3:60221277-60221296 | None:intergenic | 25.0% |
| ! | ACATTAAGATAATCATTTGC+AGG | + | chr5.3:60220058-60220077 | None:intergenic | 25.0% |
| ! | AGGATACTGAAAATCATAAT+AGG | - | chr5.3:60220999-60221018 | MS.gene45562:intron | 25.0% |
| ! | ATGAGTCTTGAAACAAATAA+AGG | - | chr5.3:60221505-60221524 | MS.gene45562:intron | 25.0% |
| ! | ATTATATCTTGGAACTGTAA+AGG | + | chr5.3:60222264-60222283 | None:intergenic | 25.0% |
| ! | CAAACAGAACCTAAATATAA+AGG | + | chr5.3:60221649-60221668 | None:intergenic | 25.0% |
| ! | CAAATTGGTATATGAATTTC+AGG | - | chr5.3:60222203-60222222 | MS.gene45562:CDS | 25.0% |
| ! | CATCATATTCTTCAAATACT+TGG | + | chr5.3:60223071-60223090 | None:intergenic | 25.0% |
| ! | CTATCATTGTACATATTTGA+AGG | + | chr5.3:60223301-60223320 | None:intergenic | 25.0% |
| ! | GAATCTGTAAATTTATGTGT+CGG | + | chr5.3:60220948-60220967 | None:intergenic | 25.0% |
| ! | TCCTCAATTGTTACAATATT+TGG | + | chr5.3:60223048-60223067 | None:intergenic | 25.0% |
| ! | TTAAAGGGTTATCTTTAAAC+AGG | - | chr5.3:60222642-60222661 | MS.gene45562:intron | 25.0% |
| ! | TTACAGTTCCAAGATATAAT+GGG | - | chr5.3:60222264-60222283 | MS.gene45562:CDS | 25.0% |
| ! | TTACTCTATAAATTGCAACA+TGG | + | chr5.3:60220406-60220425 | None:intergenic | 25.0% |
| ! | TTGTTACAGTAACATTTAGT+CGG | - | chr5.3:60222470-60222489 | MS.gene45562:CDS | 25.0% |
| ! | TTTAACAGCATTTACTACAT+TGG | - | chr5.3:60221276-60221295 | MS.gene45562:CDS | 25.0% |
| ! | TTTACAGTTCCAAGATATAA+TGG | - | chr5.3:60222263-60222282 | MS.gene45562:CDS | 25.0% |
| ! | TTTATTTGTTTCAAGACTCA+TGG | + | chr5.3:60221506-60221525 | None:intergenic | 25.0% |
| !! | CTTTATATTTAGGTTCTGTT+TGG | - | chr5.3:60221647-60221666 | MS.gene45562:intron | 25.0% |
| !!! | CTTTTGCTTATATTTAAGAC+CGG | + | chr5.3:60219926-60219945 | None:intergenic | 25.0% |
| AAAACCCCAGAAAAGAAAAA+GGG | + | chr5.3:60219738-60219757 | None:intergenic | 30.0% | |
| AAATTAAGAATCCGTAAGCA+GGG | + | chr5.3:60220539-60220558 | None:intergenic | 30.0% | |
| AATAAGCTGAAAACAACTCA+TGG | - | chr5.3:60221820-60221839 | MS.gene45562:intron | 30.0% | |
| ACAGAAAAGTGAATTCTCAT+AGG | + | chr5.3:60220586-60220605 | None:intergenic | 30.0% | |
| ACTTAACACCTTCTCAAATA+AGG | + | chr5.3:60222040-60222059 | None:intergenic | 30.0% | |
| AGAAACCTCATAAATAAAGC+AGG | + | chr5.3:60220346-60220365 | None:intergenic | 30.0% | |
| AGTCTTCAAAGAACCAAAAA+AGG | - | chr5.3:60223583-60223602 | MS.gene45562:intron | 30.0% | |
| AGTTTATCGAAACAGCTTAA+CGG | + | chr5.3:60221851-60221870 | None:intergenic | 30.0% | |
| ATATGTAGACTGAACAGAAA+GGG | + | chr5.3:60220009-60220028 | None:intergenic | 30.0% | |
| ATCTTCAAATTTCTGTTACC+TGG | - | chr5.3:60223136-60223155 | MS.gene45562:intron | 30.0% | |
| CCTGGGAAAAAATTTCTATT+TGG | - | chr5.3:60222499-60222518 | MS.gene45562:CDS | 30.0% | |
| CTTAACACCTTCTCAAATAA+GGG | + | chr5.3:60222039-60222058 | None:intergenic | 30.0% | |
| CTTATTTCGATAAGTTCTCT+AGG | + | chr5.3:60221806-60221825 | None:intergenic | 30.0% | |
| CTTCAATCAATGAAAGGTAA+CGG | - | chr5.3:60222766-60222785 | MS.gene45562:intron | 30.0% | |
| GAATCAACTTTGCATGTTTA+AGG | + | chr5.3:60221965-60221984 | None:intergenic | 30.0% | |
| GAATTGACACTTAACTTCTT+CGG | + | chr5.3:60221209-60221228 | None:intergenic | 30.0% | |
| GCCAAATATTGTAACAATTG+AGG | - | chr5.3:60223044-60223063 | MS.gene45562:CDS | 30.0% | |
| GGAAAATAATAGACCAACAT+GGG | - | chr5.3:60221297-60221316 | MS.gene45562:CDS | 30.0% | |
| TAAATTAAGAATCCGTAAGC+AGG | + | chr5.3:60220540-60220559 | None:intergenic | 30.0% | |
| TAAGTGTCAATTCAACAAAG+AGG | - | chr5.3:60221216-60221235 | MS.gene45562:intron | 30.0% | |
| TACAGTTCCAAGATATAATG+GGG | - | chr5.3:60222265-60222284 | MS.gene45562:CDS | 30.0% | |
| TATCAAAGGAGAAAAAGACA+AGG | + | chr5.3:60220710-60220729 | None:intergenic | 30.0% | |
| TATGGAATTGAGACTTACAT+GGG | - | chr5.3:60222981-60223000 | MS.gene45562:intron | 30.0% | |
| TCTACATCTTCTCATTCTAA+CGG | - | chr5.3:60222670-60222689 | MS.gene45562:intron | 30.0% | |
| TCTGAATGTCCATTTAAGTA+AGG | + | chr5.3:60222796-60222815 | None:intergenic | 30.0% | |
| TGGAAAATAATAGACCAACA+TGG | - | chr5.3:60221296-60221315 | MS.gene45562:CDS | 30.0% | |
| TGTTCTTATGAGTTCATGTT+GGG | - | chr5.3:60219695-60219714 | MS.gene45562:intron | 30.0% | |
| TTCAATCAATGAAAGGTAAC+GGG | - | chr5.3:60222767-60222786 | MS.gene45562:intron | 30.0% | |
| ! | ATAAAGGATCCAAACTTTTC+TGG | - | chr5.3:60222700-60222719 | MS.gene45562:intron | 30.0% |
| ! | ATTATGTACTGTGGTTTTTC+AGG | - | chr5.3:60223515-60223534 | MS.gene45562:intron | 30.0% |
| ! | CATCTTCTCATTTTCAACAA+GGG | - | chr5.3:60221434-60221453 | MS.gene45562:intron | 30.0% |
| ! | GAATGTTTTTCTATGGATAC+AGG | - | chr5.3:60220979-60220998 | MS.gene45562:intron | 30.0% |
| ! | TACATCCTACTGTTGTTATT+AGG | + | chr5.3:60222321-60222340 | None:intergenic | 30.0% |
| ! | TGATCATCATTTTCATCCTA+AGG | + | chr5.3:60219806-60219825 | None:intergenic | 30.0% |
| ! | TTCAACCCTTTTTCTTTTCT+GGG | - | chr5.3:60219730-60219749 | MS.gene45562:intron | 30.0% |
| ! | TTTCAACCCTTTTTCTTTTC+TGG | - | chr5.3:60219729-60219748 | MS.gene45562:intron | 30.0% |
| ! | TTTTAATCTTTCCGAAAACC+GGG | + | chr5.3:60223194-60223213 | None:intergenic | 30.0% |
| !! | AGTGCTTTGGAAATAACTTT+AGG | + | chr5.3:60223849-60223868 | None:intergenic | 30.0% |
| !! | CTTTACCTGCTTTATTTATG+AGG | - | chr5.3:60220338-60220357 | MS.gene45562:intron | 30.0% |
| !! | GCTTTATTTATGAGGTTTCT+TGG | - | chr5.3:60220346-60220365 | MS.gene45562:intron | 30.0% |
| !! | GTTTTAATCTTTCCGAAAAC+CGG | + | chr5.3:60223195-60223214 | None:intergenic | 30.0% |
| !!! | CCAAATAGAAATTTTTTCCC+AGG | + | chr5.3:60222502-60222521 | None:intergenic | 30.0% |
| !!! | CTAAATATTTTTGGGATGTG+TGG | - | chr5.3:60223749-60223768 | MS.gene45562:intron | 30.0% |
| AACAATGCAAGTGATCGATA+TGG | - | chr5.3:60221040-60221059 | MS.gene45562:intron | 35.0% | |
| AACTTATACCACCGAAATCA+AGG | + | chr5.3:60220809-60220828 | None:intergenic | 35.0% | |
| AATTAAGAATCCGTAAGCAG+GGG | + | chr5.3:60220538-60220557 | None:intergenic | 35.0% | |
| AGCAAGCACAGAATTTAACA+AGG | + | chr5.3:60223798-60223817 | None:intergenic | 35.0% | |
| AGTAGGATGTATGTATTGGA+GGG | - | chr5.3:60222330-60222349 | MS.gene45562:CDS | 35.0% | |
| AGTCTTGCTCTGACTTTAAA+TGG | - | chr5.3:60220190-60220209 | MS.gene45562:intron | 35.0% | |
| ATATTGGGACGAAAACTAAG+AGG | - | chr5.3:60222935-60222954 | MS.gene45562:intron | 35.0% | |
| ATCACCAGCATTTAATTGCA+AGG | + | chr5.3:60222376-60222395 | None:intergenic | 35.0% | |
| ATTCAAGAACACAAGCTTTC+AGG | - | chr5.3:60223978-60223997 | MS.gene45562:intron | 35.0% | |
| ATTGGAGAAGGTAAACTTGA+GGG | - | chr5.3:60221406-60221425 | MS.gene45562:intron | 35.0% | |
| CAACAGTAGGATGTATGTAT+TGG | - | chr5.3:60222326-60222345 | MS.gene45562:CDS | 35.0% | |
| CAATTAAATGCTGGTGATAC+TGG | - | chr5.3:60222378-60222397 | MS.gene45562:CDS | 35.0% | |
| CAATTCTACACAACTGCATA+AGG | + | chr5.3:60221114-60221133 | None:intergenic | 35.0% | |
| CATATGTAGACTGAACAGAA+AGG | + | chr5.3:60220010-60220029 | None:intergenic | 35.0% | |
| CCTAATGAGTTCAAATTCTG+AGG | + | chr5.3:60222730-60222749 | None:intergenic | 35.0% | |
| CCTCAGAATTTGAACTCATT+AGG | - | chr5.3:60222727-60222746 | MS.gene45562:intron | 35.0% | |
| CGATATGGTGAACATATTGA+TGG | - | chr5.3:60221055-60221074 | MS.gene45562:intron | 35.0% | |
| CTATGGAATTGAGACTTACA+TGG | - | chr5.3:60222980-60222999 | MS.gene45562:intron | 35.0% | |
| CTTATGCAGTTGTGTAGAAT+TGG | - | chr5.3:60221112-60221131 | MS.gene45562:CDS | 35.0% | |
| GAAAACCCCAGAAAAGAAAA+AGG | + | chr5.3:60219739-60219758 | None:intergenic | 35.0% | |
| GCAAACATCTCAGTCTATAT+TGG | - | chr5.3:60221456-60221475 | MS.gene45562:intron | 35.0% | |
| GGGTACATTACTTAAACTGA+TGG | + | chr5.3:60219989-60220008 | None:intergenic | 35.0% | |
| GGTATATAATCTTACCCTGA+TGG | + | chr5.3:60223228-60223247 | None:intergenic | 35.0% | |
| GTCTTGCTCTGACTTTAAAT+GGG | - | chr5.3:60220191-60220210 | MS.gene45562:intron | 35.0% | |
| GTGTTCTTATGAGTTCATGT+TGG | - | chr5.3:60219694-60219713 | MS.gene45562:intron | 35.0% | |
| GTTAGAATGAGAAGATGTAG+AGG | + | chr5.3:60222671-60222690 | None:intergenic | 35.0% | |
| GTTTATCAGAACAGAGTTAG+AGG | - | chr5.3:60223657-60223676 | MS.gene45562:intron | 35.0% | |
| TACACATTTCCCTGTAATTG+CGG | - | chr5.3:60222171-60222190 | MS.gene45562:CDS | 35.0% | |
| TATCTTAATGTGTACCCACT+TGG | - | chr5.3:60220067-60220086 | MS.gene45562:CDS | 35.0% | |
| TATTGTAAGGAAGGTTCAAC+CGG | - | chr5.3:60219458-60219477 | MS.gene45562:CDS | 35.0% | |
| TCAATCAATGAAAGGTAACG+GGG | - | chr5.3:60222768-60222787 | MS.gene45562:intron | 35.0% | |
| TGAAACGCTTTCACTAAAGA+TGG | - | chr5.3:60221336-60221355 | MS.gene45562:CDS | 35.0% | |
| TGAAGACTTTCTTGTTCCTT+TGG | + | chr5.3:60223571-60223590 | None:intergenic | 35.0% | |
| TTATTTCATTTAGGAACCCC+CGG | - | chr5.3:60223173-60223192 | MS.gene45562:intron | 35.0% | |
| TTCTAACGGCATTTCGATAA+AGG | - | chr5.3:60222684-60222703 | MS.gene45562:intron | 35.0% | |
| TTGATACTATACATCCACTG+TGG | + | chr5.3:60220770-60220789 | None:intergenic | 35.0% | |
| TTGTGTAGAATTGGTGAAGT+CGG | - | chr5.3:60221121-60221140 | MS.gene45562:CDS | 35.0% | |
| TTTAATCTTTCCGAAAACCG+GGG | + | chr5.3:60223193-60223212 | None:intergenic | 35.0% | |
| TTTCAGTTTCAGAGAAGAAG+AGG | - | chr5.3:60222905-60222924 | MS.gene45562:intron | 35.0% | |
| TTTGGCCTAATAACAACAGT+AGG | - | chr5.3:60222313-60222332 | MS.gene45562:CDS | 35.0% | |
| ! | ACATATTGATGGTAGACTAC+TGG | - | chr5.3:60221066-60221085 | MS.gene45562:intron | 35.0% |
| ! | ATACTTTTAGTCTCCCATGT+TGG | + | chr5.3:60221313-60221332 | None:intergenic | 35.0% |
| ! | ATCAGTTACTTTCTCGATAC+TGG | - | chr5.3:60221578-60221597 | MS.gene45562:CDS | 35.0% |
| ! | ATTGACTTCTGTTGTTACAC+AGG | - | chr5.3:60222534-60222553 | MS.gene45562:CDS | 35.0% |
| ! | GCATCTTCTCATTTTCAACA+AGG | - | chr5.3:60221433-60221452 | MS.gene45562:intron | 35.0% |
| ! | GGACTTTTCAGTTCAGATTT+TGG | - | chr5.3:60222295-60222314 | MS.gene45562:CDS | 35.0% |
| ! | TCAACCCTTTTTCTTTTCTG+GGG | - | chr5.3:60219731-60219750 | MS.gene45562:intron | 35.0% |
| ! | TCGATCACTTGCATTGTTTT+TGG | + | chr5.3:60221038-60221057 | None:intergenic | 35.0% |
| ! | TTTATGTGTCGGTATCACAA+TGG | + | chr5.3:60220937-60220956 | None:intergenic | 35.0% |
| !! | ACAATATTTGGCTTGACACT+AGG | + | chr5.3:60223036-60223055 | None:intergenic | 35.0% |
| !! | GGGGAGTATCCTTTATATTT+AGG | - | chr5.3:60221637-60221656 | MS.gene45562:intron | 35.0% |
| !!! | CATTGTTTTTGGTCGATTGA+GGG | + | chr5.3:60221027-60221046 | None:intergenic | 35.0% |
| !!! | CTTGGTTTTGTTAGTAAGTC+AGG | - | chr5.3:60220364-60220383 | MS.gene45562:intron | 35.0% |
| !!! | TCGCTTCTTTTTAGAATCTG+CGG | + | chr5.3:60223934-60223953 | None:intergenic | 35.0% |
| !!! | TTTCTTTTCTGGGGTTTTCA+GGG | - | chr5.3:60219740-60219759 | MS.gene45562:intron | 35.0% |
| !!! | TTTTCTTTTCTGGGGTTTTC+AGG | - | chr5.3:60219739-60219758 | MS.gene45562:intron | 35.0% |
| AAATTCCACCGTCATGAAAC+TGG | - | chr5.3:60220609-60220628 | MS.gene45562:CDS | 40.0% | |
| AACGGGGAACCTTACTTAAA+TGG | - | chr5.3:60222784-60222803 | MS.gene45562:intron | 40.0% | |
| AAGAAATTCTGTTCTGCCGT+TGG | - | chr5.3:60221375-60221394 | MS.gene45562:CDS | 40.0% | |
| AAGAAGAGGTCTCGCAATAT+TGG | - | chr5.3:60222919-60222938 | MS.gene45562:intron | 40.0% | |
| AAGGATTACTGATCAAGAGC+TGG | - | chr5.3:60221603-60221622 | MS.gene45562:CDS | 40.0% | |
| AATTGCAAGGACTGTATGCA+AGG | + | chr5.3:60222363-60222382 | None:intergenic | 40.0% | |
| ACATTCAGAACATCTGCGTT+TGG | - | chr5.3:60222807-60222826 | MS.gene45562:CDS | 40.0% | |
| ACATTTAGTCGGATAGATCC+TGG | - | chr5.3:60222481-60222500 | MS.gene45562:CDS | 40.0% | |
| ACTATACATCCACTGTGGAT+AGG | + | chr5.3:60220765-60220784 | None:intergenic | 40.0% | |
| ACTCGTTCCCCATTATATCT+TGG | + | chr5.3:60222275-60222294 | None:intergenic | 40.0% | |
| AGAAGAGGTCTCGCAATATT+GGG | - | chr5.3:60222920-60222939 | MS.gene45562:intron | 40.0% | |
| AGCTCTTGATCAGTAATCCT+TGG | + | chr5.3:60221604-60221623 | None:intergenic | 40.0% | |
| AGTCAGAGCAAGACTTTGTA+TGG | + | chr5.3:60220185-60220204 | None:intergenic | 40.0% | |
| AGTGAGGAGGAAATGAACAA+TGG | - | chr5.3:60222865-60222884 | MS.gene45562:CDS | 40.0% | |
| ATAATCTTACCCTGATGGAG+AGG | + | chr5.3:60223223-60223242 | None:intergenic | 40.0% | |
| ATTGCAAGGACTGTATGCAA+GGG | + | chr5.3:60222362-60222381 | None:intergenic | 40.0% | |
| ATTGCCTAAAACTGCTGCAT+TGG | + | chr5.3:60224018-60224037 | None:intergenic | 40.0% | |
| CACTTAACTTCTTCGGTCTT+TGG | + | chr5.3:60221202-60221221 | None:intergenic | 40.0% | |
| CAGTAGGATGTATGTATTGG+AGG | - | chr5.3:60222329-60222348 | MS.gene45562:CDS | 40.0% | |
| CAGTCCTTGCAATTAAATGC+TGG | - | chr5.3:60222369-60222388 | MS.gene45562:CDS | 40.0% | |
| CATTCAGAACATCTGCGTTT+GGG | - | chr5.3:60222808-60222827 | MS.gene45562:CDS | 40.0% | |
| CATTCATAGCGAAGATGCTA+TGG | - | chr5.3:60222963-60222982 | MS.gene45562:intron | 40.0% | |
| CATTTAGTCGGATAGATCCT+GGG | - | chr5.3:60222482-60222501 | MS.gene45562:CDS | 40.0% | |
| CCTTCTGATTGCAAAATACG+AGG | + | chr5.3:60222237-60222256 | None:intergenic | 40.0% | |
| CTTACTTTGTGCTCCTCTAA+AGG | - | chr5.3:60220116-60220135 | MS.gene45562:intron | 40.0% | |
| CTTTCACTAAAGATGGCTCT+AGG | - | chr5.3:60221343-60221362 | MS.gene45562:CDS | 40.0% | |
| GATGGCATGGTTTCATGTAT+TGG | - | chr5.3:60221175-60221194 | MS.gene45562:intron | 40.0% | |
| GATTGGAGAAGGTAAACTTG+AGG | - | chr5.3:60221405-60221424 | MS.gene45562:CDS | 40.0% | |
| GCAGACAGGTCAACATTATT+CGG | - | chr5.3:60223444-60223463 | MS.gene45562:intron | 40.0% | |
| GCTTAAAACTGCACATAGTG+AGG | - | chr5.3:60222849-60222868 | MS.gene45562:CDS | 40.0% | |
| TAAAACTGCACATAGTGAGG+AGG | - | chr5.3:60222852-60222871 | MS.gene45562:CDS | 40.0% | |
| TAACCTTACCAGACAAAGCT+GGG | + | chr5.3:60220853-60220872 | None:intergenic | 40.0% | |
| TCAAGAGCTGGAGAAATTGT+CGG | - | chr5.3:60221615-60221634 | MS.gene45562:intron | 40.0% | |
| TCATACATGCCGCAATTACA+GGG | + | chr5.3:60222183-60222202 | None:intergenic | 40.0% | |
| TCGTTCGAGTACCTTGATTT+CGG | - | chr5.3:60220795-60220814 | MS.gene45562:CDS | 40.0% | |
| TGTCAACGAATCTCAGTTCT+TGG | + | chr5.3:60219893-60219912 | None:intergenic | 40.0% | |
| TTAACCTTACCAGACAAAGC+TGG | + | chr5.3:60220854-60220873 | None:intergenic | 40.0% | |
| TTAATCTTTCCGAAAACCGG+GGG | + | chr5.3:60223192-60223211 | None:intergenic | 40.0% | |
| TTAATGTGTACCCACTTGGT+TGG | - | chr5.3:60220071-60220090 | MS.gene45562:CDS | 40.0% | |
| TTGCGGCATGTATGACAAAT+TGG | - | chr5.3:60222188-60222207 | MS.gene45562:CDS | 40.0% | |
| TTGGCTCAACTATCAAAGAC+TGG | - | chr5.3:60221475-60221494 | MS.gene45562:intron | 40.0% | |
| TTTACCTTCTCCAATCTCAG+TGG | + | chr5.3:60221401-60221420 | None:intergenic | 40.0% | |
| ! | AAGATATAATGGGGAACGAG+TGG | - | chr5.3:60222274-60222293 | MS.gene45562:CDS | 40.0% |
| ! | CAAAATACTAAGGGCTTGCT+AGG | + | chr5.3:60221926-60221945 | None:intergenic | 40.0% |
| ! | CCTCGTATTTTGCAATCAGA+AGG | - | chr5.3:60222234-60222253 | MS.gene45562:CDS | 40.0% |
| ! | CTAGCAAGCCCTTAGTATTT+TGG | - | chr5.3:60221924-60221943 | MS.gene45562:intron | 40.0% |
| ! | CTGATAGTGCTAAATGTGCA+AGG | + | chr5.3:60223249-60223268 | None:intergenic | 40.0% |
| ! | CTGATGGTTACGTCAACTTT+TGG | + | chr5.3:60219973-60219992 | None:intergenic | 40.0% |
| ! | TATTGATGGTAGACTACTGG+TGG | - | chr5.3:60221069-60221088 | MS.gene45562:intron | 40.0% |
| ! | TGTAGTGCCCTTATTTGAGA+AGG | - | chr5.3:60222029-60222048 | MS.gene45562:CDS | 40.0% |
| !! | ATATTTGGCTTGACACTAGG+CGG | + | chr5.3:60223033-60223052 | None:intergenic | 40.0% |
| !!! | GCATTGTTTTTGGTCGATTG+AGG | + | chr5.3:60221028-60221047 | None:intergenic | 40.0% |
| !!! | TAGCAGGATCGTACCTTTTT+TGG | + | chr5.3:60223599-60223618 | None:intergenic | 40.0% |
| AAAGGGTGGTCTTTGATCTC+TGG | - | chr5.3:60219491-60219510 | MS.gene45562:CDS | 45.0% | |
| AAGAGCTGGAGAAATTGTCG+GGG | - | chr5.3:60221617-60221636 | MS.gene45562:intron | 45.0% | |
| ACAAGCTCAAAGAGATGGCA+TGG | - | chr5.3:60221162-60221181 | MS.gene45562:intron | 45.0% | |
| ACGCATAAATGCACAGCTAC+AGG | + | chr5.3:60219770-60219789 | None:intergenic | 45.0% | |
| ACTGAAACCAGTTGCTGCAA+TGG | + | chr5.3:60222892-60222911 | None:intergenic | 45.0% | |
| ATCAAACCCGAGACCTTTAG+AGG | + | chr5.3:60220132-60220151 | None:intergenic | 45.0% | |
| CAACCGGTGAATGGAAGAAA+GGG | - | chr5.3:60219474-60219493 | MS.gene45562:CDS | 45.0% | |
| CAAGAGCTGGAGAAATTGTC+GGG | - | chr5.3:60221616-60221635 | MS.gene45562:intron | 45.0% | |
| CAAGGACTACTTCAGTGCTT+TGG | + | chr5.3:60223862-60223881 | None:intergenic | 45.0% | |
| CAATGACCGACTAATCCTAG+GGG | + | chr5.3:60220246-60220265 | None:intergenic | 45.0% | |
| CCAAACTCTGCAACAAATGC+GGG | - | chr5.3:60219522-60219541 | MS.gene45562:CDS | 45.0% | |
| CCAATGACCGACTAATCCTA+GGG | + | chr5.3:60220247-60220266 | None:intergenic | 45.0% | |
| CGTGTTTGAATCTCAGCCTT+AGG | - | chr5.3:60219787-60219806 | MS.gene45562:intron | 45.0% | |
| CTCTTTGAGCTTGTGACCAA+CGG | + | chr5.3:60221156-60221175 | None:intergenic | 45.0% | |
| GAAATGCAGCAATTGCAGCA+AGG | - | chr5.3:60220638-60220657 | MS.gene45562:CDS | 45.0% | |
| GAACATCTGCGTTTGGGTAA+TGG | - | chr5.3:60222814-60222833 | MS.gene45562:CDS | 45.0% | |
| GAATCACCACAAAACATCCG+AGG | - | chr5.3:60224072-60224091 | MS.gene45562:intron | 45.0% | |
| GCCAAACTCTGCAACAAATG+CGG | - | chr5.3:60219521-60219540 | MS.gene45562:CDS | 45.0% | |
| GTCATACATGCCGCAATTAC+AGG | + | chr5.3:60222184-60222203 | None:intergenic | 45.0% | |
| TACTTTCTCGATACTGGCCA+AGG | - | chr5.3:60221584-60221603 | MS.gene45562:CDS | 45.0% | |
| TCAACCGGTGAATGGAAGAA+AGG | - | chr5.3:60219473-60219492 | MS.gene45562:CDS | 45.0% | |
| TCCTCCATCCAGTTTCATGA+CGG | + | chr5.3:60220620-60220639 | None:intergenic | 45.0% | |
| TGAGGTGCACCAGAAAAGTT+TGG | + | chr5.3:60222712-60222731 | None:intergenic | 45.0% | |
| TGGTCACAAGCTCAAAGAGA+TGG | - | chr5.3:60221157-60221176 | MS.gene45562:intron | 45.0% | |
| TTCGAGTACCTTGATTTCGG+TGG | - | chr5.3:60220798-60220817 | MS.gene45562:CDS | 45.0% | |
| TTGCAAGGACTGTATGCAAG+GGG | + | chr5.3:60222361-60222380 | None:intergenic | 45.0% | |
| ! | ATACCTCAGCACACGCTTTT+GGG | + | chr5.3:60222098-60222117 | None:intergenic | 45.0% |
| ! | ATGTGTCGGTATCACAATGG+CGG | + | chr5.3:60220934-60220953 | None:intergenic | 45.0% |
| ! | ATTCCCTCTGATGCCAGTTT+TGG | - | chr5.3:60220150-60220169 | MS.gene45562:intron | 45.0% |
| ! | ATTGGACCCCTAGGATTAGT+CGG | - | chr5.3:60220237-60220256 | MS.gene45562:intron | 45.0% |
| ! | ATTTAGGAACCCCCGGTTTT+CGG | - | chr5.3:60223180-60223199 | MS.gene45562:intron | 45.0% |
| ! | CAAATGTTTGGGATGCAGAC+AGG | - | chr5.3:60223430-60223449 | MS.gene45562:intron | 45.0% |
| ! | CATTGACTATCCCCTGCTTA+CGG | - | chr5.3:60220525-60220544 | MS.gene45562:intron | 45.0% |
| ! | CTTGCCAATGCAGCAGTTTT+AGG | - | chr5.3:60224011-60224030 | MS.gene45562:intron | 45.0% |
| ! | TATACCTCAGCACACGCTTT+TGG | + | chr5.3:60222099-60222118 | None:intergenic | 45.0% |
| ! | TCATGTTTTCCCTGTCCACT+CGG | + | chr5.3:60224137-60224156 | None:intergenic | 45.0% |
| ! | TTGTGCTCCTCTAAAGGTCT+CGG | - | chr5.3:60220122-60220141 | MS.gene45562:intron | 45.0% |
| ! | TTTTTCCCCTTCACATCAGC+AGG | + | chr5.3:60221559-60221578 | None:intergenic | 45.0% |
| ! | TTTTTGCAGCCTATCCACAG+TGG | - | chr5.3:60220753-60220772 | MS.gene45562:CDS | 45.0% |
| !! | CCTAGGATTAGTCGGTCATT+GGG | - | chr5.3:60220245-60220264 | MS.gene45562:intron | 45.0% |
| !! | TGGGTAATGGAACTGCTGAT+TGG | - | chr5.3:60222827-60222846 | MS.gene45562:CDS | 45.0% |
| !!! | CTGTGGTTTTTCAGGTCTTC+AGG | - | chr5.3:60223523-60223542 | MS.gene45562:intron | 45.0% |
| !! | AAATATCTTATAATATATAT+TGG | - | chr5.3:60223334-60223353 | MS.gene45562:intron | 5.0% |
| !!! | ATTTTTGAAAATATAATTAA+AGG | - | chr5.3:60222626-60222645 | MS.gene45562:CDS | 5.0% |
| !!! | TAATTAATTCTTATATTTTA+TGG | - | chr5.3:60223894-60223913 | MS.gene45562:intron | 5.0% |
| !!! | TTTTTGAAAATATAATTAAA+GGG | - | chr5.3:60222627-60222646 | MS.gene45562:CDS | 5.0% |
| AAAACCAGTGCCTCTCCATC+AGG | - | chr5.3:60223210-60223229 | MS.gene45562:intron | 50.0% | |
| AAACCAGTGCCTCTCCATCA+GGG | - | chr5.3:60223211-60223230 | MS.gene45562:intron | 50.0% | |
| AAGTCGGTGAATCAAGCCGT+TGG | - | chr5.3:60221137-60221156 | MS.gene45562:CDS | 50.0% | |
| ACACCATTAGGCCAACCAAG+TGG | + | chr5.3:60220085-60220104 | None:intergenic | 50.0% | |
| ACCGTCATGAAACTGGATGG+AGG | - | chr5.3:60220616-60220635 | MS.gene45562:CDS | 50.0% | |
| AGACTACTGGTGGAACAAGC+TGG | - | chr5.3:60221079-60221098 | MS.gene45562:intron | 50.0% | |
| AGAGCTGGAGAAATTGTCGG+GGG | - | chr5.3:60221618-60221637 | MS.gene45562:intron | 50.0% | |
| AGGAAGGTTCAACCGGTGAA+TGG | - | chr5.3:60219465-60219484 | MS.gene45562:CDS | 50.0% | |
| ATTCAACCACCGAGTGGACA+GGG | - | chr5.3:60224125-60224144 | MS.gene45562:CDS | 50.0% | |
| CAATGGTCCATTGCAGCAAC+TGG | - | chr5.3:60222882-60222901 | MS.gene45562:intron | 50.0% | |
| CACACGATACAAGTGCATCC+AGG | + | chr5.3:60224104-60224123 | None:intergenic | 50.0% | |
| CACCATTAGGCCAACCAAGT+GGG | + | chr5.3:60220084-60220103 | None:intergenic | 50.0% | |
| CCAATTCGACCTGCATCACT+CGG | + | chr5.3:60222063-60222082 | None:intergenic | 50.0% | |
| CCACCAAAACTGGCATCAGA+GGG | + | chr5.3:60220156-60220175 | None:intergenic | 50.0% | |
| CCACCCTTTCTTCCATTCAC+CGG | + | chr5.3:60219480-60219499 | None:intergenic | 50.0% | |
| CCCAATGACCGACTAATCCT+AGG | + | chr5.3:60220248-60220267 | None:intergenic | 50.0% | |
| CTTACCAGACAAAGCTGGGA+GGG | + | chr5.3:60220849-60220868 | None:intergenic | 50.0% | |
| GATCCCAAGCCAACACCATT+AGG | + | chr5.3:60220097-60220116 | None:intergenic | 50.0% | |
| GCATCGTAAGGCTCTTGAAC+CGG | + | chr5.3:60224199-60224218 | None:intergenic | 50.0% | |
| GCTTAAGAGTCTCACAGGCA+AGG | + | chr5.3:60224175-60224194 | None:intergenic | 50.0% | |
| GGTGGTCTTTGATCTCTGGT+GGG | - | chr5.3:60219495-60219514 | MS.gene45562:CDS | 50.0% | |
| GTGTTAAGTCCGAGTGATGC+AGG | - | chr5.3:60222051-60222070 | MS.gene45562:CDS | 50.0% | |
| TCCACCGTCATGAAACTGGA+TGG | - | chr5.3:60220613-60220632 | MS.gene45562:CDS | 50.0% | |
| TCCATCCAGTTTCATGACGG+TGG | + | chr5.3:60220617-60220636 | None:intergenic | 50.0% | |
| TCGTTGACAGCGTGATACTC+CGG | - | chr5.3:60219904-60219923 | MS.gene45562:intron | 50.0% | |
| TCTCCAATCTCAGTGGCCAA+CGG | + | chr5.3:60221394-60221413 | None:intergenic | 50.0% | |
| TTGGCCACTGAGATTGGAGA+AGG | - | chr5.3:60221394-60221413 | MS.gene45562:CDS | 50.0% | |
| ! | ACGATGCCTCGGATGTTTTG+TGG | + | chr5.3:60224081-60224100 | None:intergenic | 50.0% |
| ! | CCCGCATTTGTTGCAGAGTT+TGG | + | chr5.3:60219525-60219544 | None:intergenic | 50.0% |
| ! | TGTGCTCCTCTAAAGGTCTC+GGG | - | chr5.3:60220123-60220142 | MS.gene45562:intron | 50.0% |
| !! | ATGGACTAGCCCACCAAAAC+TGG | + | chr5.3:60220166-60220185 | None:intergenic | 50.0% |
| !! | CCCTAGGATTAGTCGGTCAT+TGG | - | chr5.3:60220244-60220263 | MS.gene45562:intron | 50.0% |
| !! | CCTCTGATGCCAGTTTTGGT+GGG | - | chr5.3:60220154-60220173 | MS.gene45562:intron | 50.0% |
| !! | CTGCATTGGCAAGAGCATCT+AGG | + | chr5.3:60224004-60224023 | None:intergenic | 50.0% |
| !! | CTTGGTTGGCCTAATGGTGT+TGG | - | chr5.3:60220085-60220104 | MS.gene45562:CDS | 50.0% |
| !! | TACCCACTTGGTTGGCCTAA+TGG | - | chr5.3:60220079-60220098 | MS.gene45562:CDS | 50.0% |
| !! | TGGCCTAATGGTGTTGGCTT+GGG | - | chr5.3:60220091-60220110 | MS.gene45562:CDS | 50.0% |
| !! | TTGGCCTAATGGTGTTGGCT+TGG | - | chr5.3:60220090-60220109 | MS.gene45562:CDS | 50.0% |
| AAGCTGGGAGGGCTTAACAC+AGG | + | chr5.3:60220838-60220857 | None:intergenic | 55.0% | |
| AATCCCACCGTCCAATTGCG+GGG | + | chr5.3:60220220-60220239 | None:intergenic | 55.0% | |
| AGGCAAGGCAAGTGCATGTC+GGG | + | chr5.3:60224160-60224179 | None:intergenic | 55.0% | |
| ATCAGACCAGCTCGGTCCAA+AGG | - | chr5.3:60223552-60223571 | MS.gene45562:intron | 55.0% | |
| CAATCCCACCGTCCAATTGC+GGG | + | chr5.3:60220221-60220240 | None:intergenic | 55.0% | |
| CAGGCAAGGCAAGTGCATGT+CGG | + | chr5.3:60224161-60224180 | None:intergenic | 55.0% | |
| CATTCAACCACCGAGTGGAC+AGG | - | chr5.3:60224124-60224143 | MS.gene45562:CDS | 55.0% | |
| CCAATCCCACCGTCCAATTG+CGG | + | chr5.3:60220222-60220241 | None:intergenic | 55.0% | |
| CCCACCAAAACTGGCATCAG+AGG | + | chr5.3:60220157-60220176 | None:intergenic | 55.0% | |
| CCGAGTGATGCAGGTCGAAT+TGG | - | chr5.3:60222060-60222079 | MS.gene45562:CDS | 55.0% | |
| CCGGTGAATGGAAGAAAGGG+TGG | - | chr5.3:60219477-60219496 | MS.gene45562:CDS | 55.0% | |
| CCTGTGAGACTCTTAAGCGC+CGG | - | chr5.3:60224177-60224196 | MS.gene45562:CDS | 55.0% | |
| CCTTACCAGACAAAGCTGGG+AGG | + | chr5.3:60220850-60220869 | None:intergenic | 55.0% | |
| CTGGTGGAACAAGCTGGCAA+AGG | - | chr5.3:60221085-60221104 | MS.gene45562:intron | 55.0% | |
| CTTGTTCCTTTGGACCGAGC+TGG | + | chr5.3:60223561-60223580 | None:intergenic | 55.0% | |
| GGGTGGTCTTTGATCTCTGG+TGG | - | chr5.3:60219494-60219513 | MS.gene45562:CDS | 55.0% | |
| GGTTCTGCATCAGACCAGCT+CGG | - | chr5.3:60223544-60223563 | MS.gene45562:intron | 55.0% | |
| GTGTGCATTCAACCACCGAG+TGG | - | chr5.3:60224119-60224138 | MS.gene45562:CDS | 55.0% | |
| TGATCTCTCATCCACCACGC+CGG | - | chr5.3:60221530-60221549 | MS.gene45562:intron | 55.0% | |
| TTCCCCTTCACATCAGCAGG+TGG | + | chr5.3:60221556-60221575 | None:intergenic | 55.0% | |
| ! | CCTCCCAGCTTTGTCTGGTA+AGG | - | chr5.3:60220847-60220866 | MS.gene45562:CDS | 55.0% |
| ! | TAAGCCCTCCCAGCTTTGTC+TGG | - | chr5.3:60220842-60220861 | MS.gene45562:CDS | 55.0% |
| ! | TGTTTTCCCTGTCCACTCGG+TGG | + | chr5.3:60224134-60224153 | None:intergenic | 55.0% |
| ! | TTACCCTGATGGAGAGGCAC+TGG | + | chr5.3:60223217-60223236 | None:intergenic | 55.0% |
| !! | AAACATCCGAGGCATCGTCC+TGG | - | chr5.3:60224083-60224102 | MS.gene45562:intron | 55.0% |
| !! | CCCTCTGATGCCAGTTTTGG+TGG | - | chr5.3:60220153-60220172 | MS.gene45562:intron | 55.0% |
| !! | TTTGGCTTGACACTAGGCGG+CGG | + | chr5.3:60223030-60223049 | None:intergenic | 55.0% |
| ATCCCACCGTCCAATTGCGG+GGG | + | chr5.3:60220219-60220238 | None:intergenic | 60.0% | |
| CAGCTGACGACGACTCGTCA+GGG | + | chr5.3:60224052-60224071 | None:intergenic | 60.0% | |
| CCGCAATTGGACGGTGGGAT+TGG | - | chr5.3:60220219-60220238 | MS.gene45562:intron | 60.0% | |
| CCGGCGCTTAAGAGTCTCAC+AGG | + | chr5.3:60224180-60224199 | None:intergenic | 60.0% | |
| CCTTCACATCAGCAGGTGGC+CGG | + | chr5.3:60221552-60221571 | None:intergenic | 60.0% | |
| CGGCCACCTGCTGATGTGAA+GGG | - | chr5.3:60221550-60221569 | MS.gene45562:CDS | 60.0% | |
| CTGCCGTTGGCCACTGAGAT+TGG | - | chr5.3:60221388-60221407 | MS.gene45562:CDS | 60.0% | |
| GGCCACCTGCTGATGTGAAG+GGG | - | chr5.3:60221551-60221570 | MS.gene45562:CDS | 60.0% | |
| GTGCATCCAGGACGATGCCT+CGG | + | chr5.3:60224092-60224111 | None:intergenic | 60.0% | |
| TAAATGGGCCCCCCCGCAAT+TGG | - | chr5.3:60220206-60220225 | MS.gene45562:intron | 60.0% | |
| ! | GCTCCCAAAAGCGTGTGCTG+AGG | - | chr5.3:60222092-60222111 | MS.gene45562:CDS | 60.0% |
| CCAGCTGACGACGACTCGTC+AGG | + | chr5.3:60224053-60224072 | None:intergenic | 65.0% | |
| CCGGCCACCTGCTGATGTGA+AGG | - | chr5.3:60221549-60221568 | MS.gene45562:CDS | 65.0% | |
| CCTGACGAGTCGTCGTCAGC+TGG | - | chr5.3:60224050-60224069 | MS.gene45562:intron | 65.0% | |
| GACGGTGGGATTGGACCCCT+AGG | - | chr5.3:60220228-60220247 | MS.gene45562:intron | 65.0% | |
| TCCCACCGTCCAATTGCGGG+GGG | + | chr5.3:60220218-60220237 | None:intergenic | 65.0% | |
| ACATCAGCAGGTGGCCGGCG+TGG | + | chr5.3:60221547-60221566 | None:intergenic | 70.0% | |
| CCCACCGTCCAATTGCGGGG+GGG | + | chr5.3:60220217-60220236 | None:intergenic | 70.0% | |
| CCCCCCCGCAATTGGACGGT+GGG | - | chr5.3:60220214-60220233 | MS.gene45562:intron | 70.0% | |
| TGGGCCCCCCCGCAATTGGA+CGG | - | chr5.3:60220210-60220229 | MS.gene45562:intron | 70.0% | |
| GCCCCCCCGCAATTGGACGG+TGG | - | chr5.3:60220213-60220232 | MS.gene45562:intron | 75.0% | |
| TCAGCAGGTGGCCGGCGTGG+TGG | + | chr5.3:60221544-60221563 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 60219431 | 60224218 | 60219431 | ID=MS.gene45562 |
| chr5.3 | mRNA | 60219431 | 60224218 | 60219431 | ID=MS.gene45562.t1;Parent=MS.gene45562 |
| chr5.3 | exon | 60224106 | 60224218 | 60224106 | ID=MS.gene45562.t1.exon1;Parent=MS.gene45562.t1 |
| chr5.3 | CDS | 60224106 | 60224218 | 60224106 | ID=cds.MS.gene45562.t1;Parent=MS.gene45562.t1 |
| chr5.3 | exon | 60222990 | 60223071 | 60222990 | ID=MS.gene45562.t1.exon2;Parent=MS.gene45562.t1 |
| chr5.3 | CDS | 60222990 | 60223071 | 60222990 | ID=cds.MS.gene45562.t1;Parent=MS.gene45562.t1 |
| chr5.3 | exon | 60222786 | 60222887 | 60222786 | ID=MS.gene45562.t1.exon3;Parent=MS.gene45562.t1 |
| chr5.3 | CDS | 60222786 | 60222887 | 60222786 | ID=cds.MS.gene45562.t1;Parent=MS.gene45562.t1 |
| chr5.3 | exon | 60222008 | 60222648 | 60222008 | ID=MS.gene45562.t1.exon4;Parent=MS.gene45562.t1 |
| chr5.3 | CDS | 60222008 | 60222648 | 60222008 | ID=cds.MS.gene45562.t1;Parent=MS.gene45562.t1 |
| chr5.3 | exon | 60221536 | 60221632 | 60221536 | ID=MS.gene45562.t1.exon5;Parent=MS.gene45562.t1 |
| chr5.3 | CDS | 60221536 | 60221632 | 60221536 | ID=cds.MS.gene45562.t1;Parent=MS.gene45562.t1 |
| chr5.3 | exon | 60221250 | 60221424 | 60221250 | ID=MS.gene45562.t1.exon6;Parent=MS.gene45562.t1 |
| chr5.3 | CDS | 60221250 | 60221424 | 60221250 | ID=cds.MS.gene45562.t1;Parent=MS.gene45562.t1 |
| chr5.3 | exon | 60221094 | 60221170 | 60221094 | ID=MS.gene45562.t1.exon7;Parent=MS.gene45562.t1 |
| chr5.3 | CDS | 60221094 | 60221170 | 60221094 | ID=cds.MS.gene45562.t1;Parent=MS.gene45562.t1 |
| chr5.3 | exon | 60220560 | 60220985 | 60220560 | ID=MS.gene45562.t1.exon8;Parent=MS.gene45562.t1 |
| chr5.3 | CDS | 60220560 | 60220985 | 60220560 | ID=cds.MS.gene45562.t1;Parent=MS.gene45562.t1 |
| chr5.3 | exon | 60220417 | 60220463 | 60220417 | ID=MS.gene45562.t1.exon9;Parent=MS.gene45562.t1 |
| chr5.3 | CDS | 60220417 | 60220463 | 60220417 | ID=cds.MS.gene45562.t1;Parent=MS.gene45562.t1 |
| chr5.3 | exon | 60220045 | 60220112 | 60220045 | ID=MS.gene45562.t1.exon10;Parent=MS.gene45562.t1 |
| chr5.3 | CDS | 60220045 | 60220112 | 60220045 | ID=cds.MS.gene45562.t1;Parent=MS.gene45562.t1 |
| chr5.3 | exon | 60219431 | 60219712 | 60219431 | ID=MS.gene45562.t1.exon11;Parent=MS.gene45562.t1 |
| chr5.3 | CDS | 60219431 | 60219712 | 60219431 | ID=cds.MS.gene45562.t1;Parent=MS.gene45562.t1 |
| Gene Sequence |
| Protein sequence |
