AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene46217

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene46217.t1 MTR_5g082910 89.701 301 16 4 1 299 1 288 1.91e-176 489
MS.gene46217.t1 MTR_4g094982 69.369 111 34 0 21 131 2 112 3.39e-52 172
MS.gene46217.t1 MTR_5g016510 38.667 300 148 7 21 292 2 293 6.06e-52 173
MS.gene46217.t1 MTR_3g101290 71.154 104 30 0 21 124 34 137 6.85e-51 167
MS.gene46217.t1 MTR_4g019370 73.786 103 27 0 22 124 36 138 4.48e-50 169
MS.gene46217.t1 MTR_6g015455 65.138 109 38 0 21 129 2 110 3.46e-44 161
MS.gene46217.t1 MTR_3g110028 43.357 143 72 2 19 152 80 222 1.08e-34 133
MS.gene46217.t1 MTR_3g089045 48.696 115 59 0 11 125 3 117 1.58e-34 127
MS.gene46217.t1 MTR_6g027370 47.748 111 58 0 23 133 98 208 1.08e-33 126
MS.gene46217.t1 MTR_6g074860 50.000 110 52 1 24 130 4 113 1.86e-33 123
MS.gene46217.t1 MTR_7g451170 51.754 114 55 0 11 124 178 291 2.65e-33 126
MS.gene46217.t1 MTR_1g026870 43.182 132 73 1 19 148 80 211 4.97e-33 129
MS.gene46217.t1 MTR_5g041570 47.899 119 59 1 9 124 116 234 1.71e-32 124
MS.gene46217.t1 MTR_7g061330 46.341 123 62 1 19 141 72 190 2.09e-32 125
MS.gene46217.t1 MTR_7g061330 46.341 123 62 1 19 141 108 226 2.13e-32 125
MS.gene46217.t1 MTR_7g461410 46.341 123 62 1 19 141 108 226 2.13e-32 125
MS.gene46217.t1 MTR_6g027340 41.322 121 71 0 13 133 5 125 2.19e-32 119
MS.gene46217.t1 MTR_3g077650 52.885 104 49 0 23 126 180 283 3.70e-32 124
MS.gene46217.t1 MTR_7g037260 50.962 104 51 0 23 126 144 247 9.67e-32 121
MS.gene46217.t1 MTR_6g027360 40.602 133 78 1 1 133 56 187 1.21e-31 120
MS.gene46217.t1 MTR_4g082040 45.528 123 64 1 5 124 83 205 6.40e-31 120
MS.gene46217.t1 MTR_7g086960 50.980 102 50 0 24 125 89 190 1.55e-30 118
MS.gene46217.t1 MTR_4g105660 51.923 104 50 0 23 126 179 282 1.63e-30 119
MS.gene46217.t1 MTR_4g088015 51.923 104 50 0 23 126 220 323 2.26e-30 119
MS.gene46217.t1 MTR_3g463400 42.742 124 71 0 23 146 132 255 3.22e-30 119
MS.gene46217.t1 MTR_5g010650 50.000 100 50 0 19 118 105 204 8.36e-30 117
MS.gene46217.t1 MTR_5g049190 47.525 101 53 0 23 123 18 118 2.17e-29 112
MS.gene46217.t1 MTR_5g070020 47.115 104 55 0 23 126 121 224 3.16e-29 114
MS.gene46217.t1 MTR_5g042030 43.077 130 71 2 24 152 9 136 8.23e-29 112
MS.gene46217.t1 MTR_7g037130 51.000 100 49 0 23 122 144 243 9.68e-29 113
MS.gene46217.t1 MTR_3g461490 36.970 165 94 4 21 183 10 166 1.41e-28 112
MS.gene46217.t1 MTR_8g031360 44.715 123 62 4 24 143 15 134 2.27e-28 110
MS.gene46217.t1 MTR_3g052450 42.336 137 73 2 24 159 42 173 8.40e-28 112
MS.gene46217.t1 MTR_8g042410 48.673 113 55 2 24 134 39 150 1.10e-27 112
MS.gene46217.t1 MTR_7g076740 45.455 132 64 6 17 145 8 134 1.13e-27 109
MS.gene46217.t1 MTR_1g057980 41.481 135 70 1 24 149 80 214 1.33e-27 108
MS.gene46217.t1 MTR_1g062940 46.729 107 54 2 20 124 4 109 2.19e-27 106
MS.gene46217.t1 MTR_7g450950 49.000 100 51 0 23 122 156 255 2.77e-27 108
MS.gene46217.t1 MTR_8g006470 50.926 108 49 3 24 129 12 117 5.01e-27 107
MS.gene46217.t1 MTR_8g095390 45.763 118 59 3 24 139 14 128 9.61e-27 107
MS.gene46217.t1 MTR_5g029840 44.800 125 63 4 17 139 8 128 1.34e-26 107
MS.gene46217.t1 MTR_3g052430 44.444 117 64 1 24 139 43 159 1.49e-26 109
MS.gene46217.t1 MTR_4g063100 43.363 113 61 2 24 134 9 120 1.51e-26 105
MS.gene46217.t1 MTR_3g028740 50.980 102 49 1 24 124 24 125 1.78e-26 107
MS.gene46217.t1 MTR_2g011660 42.735 117 64 2 24 139 15 129 2.01e-26 106
MS.gene46217.t1 MTR_0008s0280 47.706 109 53 3 17 123 8 114 2.02e-26 104
MS.gene46217.t1 MTR_3g011610 43.478 138 70 4 4 134 14 150 2.60e-26 108
MS.gene46217.t1 MTR_2g034790 44.167 120 62 3 24 141 14 130 2.91e-26 106
MS.gene46217.t1 MTR_4g485530 45.714 105 56 1 21 124 11 115 3.73e-26 102
MS.gene46217.t1 MTR_4g091490 42.623 122 66 3 19 139 11 129 4.46e-26 105
MS.gene46217.t1 MTR_2g097910 46.429 112 59 1 24 134 22 133 5.07e-26 105
MS.gene46217.t1 MTR_7g087130 46.429 112 59 1 24 134 14 125 5.94e-26 105
MS.gene46217.t1 MTR_5g079670 47.059 102 53 1 24 124 13 114 7.36e-26 102
MS.gene46217.t1 MTR_4g121460 43.443 122 68 1 24 144 14 135 8.60e-26 105
MS.gene46217.t1 MTR_5g007370 45.600 125 62 4 17 139 8 128 9.53e-26 103
MS.gene46217.t1 MTR_7g011170 41.463 123 69 2 24 145 14 134 1.03e-25 104
MS.gene46217.t1 MTR_3g097450 38.732 142 72 4 24 151 14 154 1.09e-25 103
MS.gene46217.t1 MTR_1g100653 43.363 113 63 1 24 135 14 126 1.10e-25 103
MS.gene46217.t1 MTR_1g085640 46.610 118 58 3 24 139 14 128 1.30e-25 105
MS.gene46217.t1 MTR_1g085040 50.485 103 48 2 24 124 14 115 1.35e-25 104
MS.gene46217.t1 MTR_4g029540 46.400 125 60 4 18 140 6 125 1.62e-25 103
MS.gene46217.t1 MTR_7g035350 48.039 102 53 0 21 122 222 323 1.90e-25 105
MS.gene46217.t1 MTR_2g089620 43.548 124 66 3 17 139 8 128 2.44e-25 103
MS.gene46217.t1 MTR_4g065017 43.548 124 69 1 12 134 7 130 2.81e-25 103
MS.gene46217.t1 MTR_0063s0090 47.222 108 53 3 17 122 8 113 4.56e-25 100
MS.gene46217.t1 MTR_4g073420 46.602 103 52 2 24 124 14 115 7.00e-25 101
MS.gene46217.t1 MTR_8g098860 48.624 109 52 3 19 124 8 115 7.36e-25 102
MS.gene46217.t1 MTR_4g478180 44.882 127 64 4 17 141 9 131 7.86e-25 102
MS.gene46217.t1 MTR_7g110830 45.763 118 59 3 24 139 14 128 8.78e-25 102
MS.gene46217.t1 MTR_1g073170 46.602 103 52 2 24 124 22 123 8.97e-25 100
MS.gene46217.t1 MTR_1g045610 45.631 103 53 2 24 124 23 124 9.25e-25 100
MS.gene46217.t1 MTR_4g082230 43.220 118 62 3 24 139 14 128 1.22e-24 102
MS.gene46217.t1 MTR_3g074520 34.940 166 101 5 17 180 8 168 1.35e-24 101
MS.gene46217.t1 MTR_6g009430 40.323 124 68 4 24 145 14 133 1.42e-24 101
MS.gene46217.t1 MTR_2g064160 44.660 103 54 2 24 124 13 114 1.77e-24 100
MS.gene46217.t1 MTR_0008s0390 45.631 103 53 2 24 124 15 116 1.81e-24 100
MS.gene46217.t1 MTR_0008s0470 46.602 103 52 2 24 124 15 116 1.98e-24 100
MS.gene46217.t1 MTR_5g088080 44.444 117 60 3 21 135 11 124 2.13e-24 99.8
MS.gene46217.t1 MTR_5g088150 44.444 117 60 3 21 135 11 124 2.13e-24 99.8
MS.gene46217.t1 MTR_5g488210 44.444 117 60 3 21 135 11 124 2.13e-24 99.8
MS.gene46217.t1 MTR_4g100720 42.718 103 56 2 24 124 15 116 2.29e-24 97.4
MS.gene46217.t1 MTR_5g088640 44.444 117 60 3 21 135 11 124 2.66e-24 99.8
MS.gene46217.t1 MTR_8g017440 46.789 109 54 3 19 124 8 115 3.18e-24 100
MS.gene46217.t1 MTR_4g105130 38.125 160 89 5 24 176 14 170 3.78e-24 100
MS.gene46217.t1 MTR_2g099740 46.789 109 54 3 19 124 8 115 4.09e-24 101
MS.gene46217.t1 MTR_2g096380 44.660 103 54 2 24 124 8 109 4.36e-24 98.2
MS.gene46217.t1 MTR_5g488170 44.444 117 60 3 21 135 11 124 4.55e-24 98.2
MS.gene46217.t1 MTR_5g010020 50.962 104 47 3 19 119 8 110 4.72e-24 100
MS.gene46217.t1 MTR_6g090405 44.643 112 60 2 24 133 14 125 4.86e-24 98.6
MS.gene46217.t1 MTR_1g017000 39.552 134 72 5 21 146 10 142 5.63e-24 98.2
MS.gene46217.t1 MTR_5g088610 44.643 112 60 2 21 130 8 119 5.96e-24 100
MS.gene46217.t1 MTR_0251s0050 44.660 103 54 2 24 124 15 116 8.50e-24 98.2
MS.gene46217.t1 MTR_3g103570 46.602 103 53 2 24 124 14 116 1.06e-23 99.4
MS.gene46217.t1 MTR_4g102380 40.678 118 65 3 24 139 14 128 1.08e-23 97.8
MS.gene46217.t1 MTR_1g112760 41.667 120 65 3 24 141 15 131 1.10e-23 97.1
MS.gene46217.t1 MTR_1g021230 48.148 108 53 2 24 129 59 165 1.29e-23 100
MS.gene46217.t1 MTR_7g117730 44.118 102 56 1 24 124 14 115 1.58e-23 97.1
MS.gene46217.t1 MTR_8g017540 46.789 109 54 3 19 124 54 161 1.62e-23 99.4
MS.gene46217.t1 MTR_3g077110 41.463 123 67 3 24 144 14 133 1.82e-23 98.6
MS.gene46217.t1 MTR_6g012690 41.463 123 66 3 21 139 8 128 2.18e-23 98.6
MS.gene46217.t1 MTR_5g062790 43.590 117 61 3 21 135 8 121 2.73e-23 97.4
MS.gene46217.t1 MTR_2g089420 46.364 110 55 3 17 124 7 114 3.82e-23 99.0
MS.gene46217.t1 MTR_4g082290 41.026 117 66 2 24 139 14 128 5.42e-23 98.2
MS.gene46217.t1 MTR_2g088170 45.000 120 65 1 24 142 31 150 7.39e-23 98.2
MS.gene46217.t1 MTR_0140s0030 46.078 102 54 1 24 124 15 116 7.99e-23 96.7
MS.gene46217.t1 MTR_0489s0020 46.078 102 54 1 24 124 15 116 7.99e-23 96.7
MS.gene46217.t1 MTR_7g115650 42.718 103 56 2 24 124 14 115 1.03e-22 93.6
MS.gene46217.t1 MTR_1g100667 44.444 108 57 2 24 129 15 121 1.22e-22 95.1
MS.gene46217.t1 MTR_8g027345 45.098 102 55 1 24 124 14 115 1.27e-22 95.5
MS.gene46217.t1 MTR_2g089450 44.037 109 57 3 17 123 8 114 1.49e-22 94.4
MS.gene46217.t1 MTR_8g020490 44.118 102 56 1 24 124 10 111 1.50e-22 94.4
MS.gene46217.t1 MTR_8g017500 45.872 109 55 3 19 124 8 115 2.24e-22 95.9
MS.gene46217.t1 MTR_5g014990 44.660 103 55 2 24 124 14 116 2.32e-22 95.1
MS.gene46217.t1 MTR_5g078140 39.516 124 67 4 21 139 8 128 2.48e-22 95.1
MS.gene46217.t1 MTR_3g039990 46.078 102 54 1 24 124 15 116 2.59e-22 95.1
MS.gene46217.t1 MTR_3g065440 40.496 121 64 4 21 136 8 125 2.87e-22 94.7
MS.gene46217.t1 MTR_7g035075 42.478 113 62 2 18 128 10 121 2.98e-22 92.4
MS.gene46217.t1 MTR_8g017340 46.154 104 52 3 24 124 14 116 4.65e-22 96.3
MS.gene46217.t1 MTR_1g043080 44.118 102 56 1 24 124 14 115 4.93e-22 93.2
MS.gene46217.t1 MTR_7g010210 43.636 110 58 3 17 124 8 115 4.99e-22 93.6
MS.gene46217.t1 MTR_1g110460 38.938 113 66 2 14 124 18 129 5.68e-22 94.0
MS.gene46217.t1 MTR_7g096930 44.660 103 54 2 24 124 14 115 6.35e-22 93.2
MS.gene46217.t1 MTR_1g076150 43.689 103 55 2 24 124 14 115 7.01e-22 92.8
MS.gene46217.t1 MTR_7g010210 43.636 110 58 3 17 124 8 115 7.18e-22 94.0
MS.gene46217.t1 MTR_6g012180 47.115 104 53 2 17 119 8 110 7.51e-22 94.0
MS.gene46217.t1 MTR_4g128670 48.980 98 48 2 24 119 14 111 9.14e-22 94.0
MS.gene46217.t1 MTR_1g017140 44.660 103 55 2 24 124 14 116 9.35e-22 94.0
MS.gene46217.t1 MTR_1g043050 43.137 102 57 1 24 124 14 115 9.40e-22 92.4
MS.gene46217.t1 MTR_8g017350 46.154 104 52 3 24 124 14 116 1.29e-21 95.1
MS.gene46217.t1 MTR_7g111290 49.485 97 46 2 24 118 14 109 1.46e-21 94.0
MS.gene46217.t1 MTR_8g017390 44.545 110 56 4 19 124 8 116 2.19e-21 94.0
MS.gene46217.t1 MTR_6g055910 42.056 107 59 2 24 128 16 121 3.77e-21 91.3
MS.gene46217.t1 MTR_4g125520 33.099 142 85 3 24 160 14 150 3.88e-21 91.7
MS.gene46217.t1 MTR_4g063100 47.436 78 41 0 57 134 14 91 6.43e-21 89.4
MS.gene46217.t1 MTR_4g097570 45.918 98 50 2 24 118 14 111 6.49e-21 90.9
MS.gene46217.t1 MTR_3g083540 41.748 103 57 2 24 124 43 144 8.68e-21 90.5
MS.gene46217.t1 MTR_6g006030 42.157 102 58 1 24 124 16 117 9.07e-21 88.6
MS.gene46217.t1 MTR_7g102110 34.328 134 86 2 24 155 14 147 1.53e-20 89.4
MS.gene46217.t1 MTR_4g057635 42.453 106 59 2 24 127 14 119 1.59e-20 90.1
MS.gene46217.t1 MTR_2g067420 45.918 98 50 2 24 119 16 112 3.14e-20 89.4
MS.gene46217.t1 MTR_1g083630 42.017 119 68 1 12 129 2 120 5.36e-20 90.5
MS.gene46217.t1 MTR_4g097570 45.361 97 51 2 24 118 14 110 5.86e-20 88.2
MS.gene46217.t1 MTR_5g079220 37.615 109 59 2 24 127 23 127 1.52e-19 86.7
MS.gene46217.t1 MTR_3g045430 37.190 121 71 3 27 145 18 135 1.64e-19 87.0
MS.gene46217.t1 MTR_0247s0040 40.385 104 53 2 24 122 9 108 1.72e-19 84.3
MS.gene46217.t1 MTR_2g095520 45.918 98 51 2 24 119 14 111 1.74e-19 87.4
MS.gene46217.t1 MTR_7g109320 49.020 102 51 1 24 124 14 115 2.82e-19 87.0
MS.gene46217.t1 MTR_1g086510 42.593 108 60 2 14 119 12 119 4.01e-19 85.5
MS.gene46217.t1 MTR_5g079290 35.780 109 61 2 24 127 19 123 6.46e-19 84.7
MS.gene46217.t1 MTR_5g078910 38.835 103 60 2 24 124 9 110 6.71e-19 85.1
MS.gene46217.t1 MTR_1g086530 43.750 96 51 2 24 117 35 129 7.09e-19 84.7
MS.gene46217.t1 MTR_5g078800 37.736 106 57 2 24 124 9 110 8.51e-19 84.3
MS.gene46217.t1 MTR_8g060940 40.777 103 52 2 24 121 9 107 8.57e-19 84.0
MS.gene46217.t1 MTR_5g078860 38.679 106 56 2 24 124 9 110 1.36e-18 84.3
MS.gene46217.t1 MTR_5g079120 39.623 106 55 2 24 124 63 164 1.60e-18 84.3
MS.gene46217.t1 MTR_7g017260 37.963 108 56 2 24 124 27 130 1.77e-18 83.6
MS.gene46217.t1 MTR_2g096380 48.529 68 35 0 57 124 23 90 3.40e-18 81.6
MS.gene46217.t1 MTR_0193s0090 38.095 105 56 2 24 123 9 109 4.55e-18 81.3
MS.gene46217.t1 MTR_2g033170 41.129 124 69 3 3 124 6 127 6.45e-18 82.8
MS.gene46217.t1 MTR_0001s0360 37.255 102 63 1 24 124 9 110 1.05e-17 81.3
MS.gene46217.t1 MTR_0197s0010 37.383 107 64 2 26 130 5 110 1.32e-17 80.5
MS.gene46217.t1 MTR_5g078950 37.500 104 56 2 24 122 9 108 1.96e-17 80.5
MS.gene46217.t1 MTR_6g055910 45.833 72 39 0 57 128 21 92 4.27e-17 79.3
MS.gene46217.t1 MTR_4g123040 38.889 126 71 2 6 130 8 128 5.09e-17 80.1
MS.gene46217.t1 MTR_5g038910 32.075 106 71 1 26 130 28 133 5.28e-17 80.9
MS.gene46217.t1 MTR_5g078930 38.679 106 56 2 22 122 9 110 6.30e-17 78.2
MS.gene46217.t1 MTR_8g468380 35.000 100 64 1 26 125 24 122 6.68e-17 80.9
MS.gene46217.t1 MTR_7g111290 58.065 62 26 0 57 118 6 67 9.22e-17 79.7
MS.gene46217.t1 MTR_5g038910 32.075 106 71 1 26 130 28 133 9.41e-17 80.5
MS.gene46217.t1 MTR_4g128190 41.667 108 50 3 17 123 6 101 2.24e-16 77.0
MS.gene46217.t1 MTR_1g085880 38.655 119 70 3 17 132 6 124 6.84e-14 69.3
MS.gene46217.t1 MTR_1g008970 34.375 96 44 1 19 114 105 181 7.22e-14 70.5
MS.gene46217.t1 MTR_1g085770 38.655 119 70 3 17 132 6 124 1.51e-13 70.1
MS.gene46217.t1 MTR_7g061550 36.364 99 60 1 22 117 5 103 1.04e-12 68.2
MS.gene46217.t1 MTR_5g007300 43.421 76 40 2 24 97 66 140 5.14e-12 62.8
MS.gene46217.t1 MTR_4g063100 42.857 56 32 0 79 134 1 56 1.13e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene46217.t1 AT3G50060 64.706 119 38 1 20 138 2 116 8.02e-50 167
MS.gene46217.t1 AT3G09230 71.154 104 30 0 21 124 52 155 9.45e-48 164
MS.gene46217.t1 AT3G55730 70.874 103 30 0 22 124 54 156 2.01e-47 164
MS.gene46217.t1 AT5G67300 68.571 105 33 0 20 124 2 106 3.81e-47 160
MS.gene46217.t1 AT4G37260 68.224 107 34 0 18 124 7 113 4.09e-47 160
MS.gene46217.t1 AT2G23290 70.192 104 31 0 21 124 10 113 8.00e-47 160
MS.gene46217.t1 AT2G39880 61.538 117 42 1 8 124 37 150 1.84e-45 157
MS.gene46217.t1 AT1G73410 53.465 101 47 0 24 124 6 106 4.25e-34 124
MS.gene46217.t1 AT1G73410 53.465 101 47 0 24 124 6 106 4.46e-34 123
MS.gene46217.t1 AT3G09370 45.522 134 69 1 19 152 138 267 8.94e-34 129
MS.gene46217.t1 AT3G09370 45.522 134 69 1 19 152 130 259 8.96e-34 129
MS.gene46217.t1 AT3G09370 45.522 134 69 1 19 152 125 254 9.91e-34 129
MS.gene46217.t1 AT4G33450 40.645 155 79 3 24 176 19 162 1.29e-33 124
MS.gene46217.t1 AT1G17950 50.495 101 50 0 24 124 5 105 1.73e-33 123
MS.gene46217.t1 AT5G02320 46.400 125 63 1 19 143 62 182 2.75e-33 127
MS.gene46217.t1 AT5G02320 46.400 125 63 1 19 143 122 242 4.28e-33 127
MS.gene46217.t1 AT5G02320 46.400 125 63 1 19 143 122 242 4.28e-33 127
MS.gene46217.t1 AT5G17800 54.455 101 46 0 24 124 93 193 5.53e-33 124
MS.gene46217.t1 AT4G32730 46.903 113 60 0 19 131 82 194 2.97e-31 123
MS.gene46217.t1 AT4G32730 46.903 113 60 0 19 131 82 194 3.01e-31 123
MS.gene46217.t1 AT4G32730 46.903 113 60 0 19 131 82 194 3.01e-31 123
MS.gene46217.t1 AT4G32730 46.903 113 60 0 19 131 82 194 3.01e-31 123
MS.gene46217.t1 AT4G32730 46.903 113 60 0 19 131 82 194 3.01e-31 123
MS.gene46217.t1 AT5G11510 42.478 113 65 0 19 131 76 188 5.32e-31 122
MS.gene46217.t1 AT5G11510 42.478 113 65 0 19 131 76 188 5.32e-31 122
MS.gene46217.t1 AT5G11510 42.478 113 65 0 19 131 76 188 5.32e-31 122
MS.gene46217.t1 AT1G69560 41.606 137 67 2 15 140 98 232 6.03e-31 118
MS.gene46217.t1 AT5G11510 42.478 113 65 0 19 131 76 188 6.46e-31 122
MS.gene46217.t1 AT5G11050 48.077 104 54 0 23 126 104 207 6.50e-31 120
MS.gene46217.t1 AT5G11510 42.478 113 65 0 19 131 76 188 6.78e-31 122
MS.gene46217.t1 AT1G69560 40.741 135 71 1 15 140 114 248 9.00e-31 118
MS.gene46217.t1 AT5G58850 47.059 102 54 0 23 124 104 205 1.58e-30 119
MS.gene46217.t1 AT4G18770 50.980 102 50 0 23 124 216 317 2.52e-30 119
MS.gene46217.t1 AT1G26780 49.505 101 51 0 24 124 98 198 3.44e-30 115
MS.gene46217.t1 AT1G26780 49.505 101 51 0 24 124 98 198 8.48e-30 116
MS.gene46217.t1 AT5G40360 47.368 114 57 1 24 134 158 271 2.31e-29 115
MS.gene46217.t1 AT4G26930 46.457 127 62 2 14 134 6 132 8.75e-29 114
MS.gene46217.t1 AT4G00540 52.885 104 46 1 24 124 103 206 9.48e-29 114
MS.gene46217.t1 AT5G56110 40.458 131 75 2 24 153 14 142 1.02e-28 112
MS.gene46217.t1 AT3G27785 50.000 104 52 0 23 126 188 291 1.29e-28 114
MS.gene46217.t1 AT4G00540 52.885 104 46 1 24 124 101 204 2.14e-28 113
MS.gene46217.t1 AT1G74430 45.455 121 63 2 24 143 14 132 2.42e-28 110
MS.gene46217.t1 AT5G06100 38.255 149 81 2 1 138 1 149 3.24e-28 113
MS.gene46217.t1 AT3G29020 46.535 101 54 0 24 124 65 165 4.29e-28 108
MS.gene46217.t1 AT4G28110 45.161 124 64 3 17 139 8 128 4.46e-28 110
MS.gene46217.t1 AT2G32460 49.533 107 53 1 24 129 20 126 7.27e-28 112
MS.gene46217.t1 AT3G11440 44.828 116 63 1 24 138 43 158 7.65e-28 112
MS.gene46217.t1 AT2G32460 49.533 107 53 1 24 129 8 114 7.76e-28 112
MS.gene46217.t1 AT3G53200 49.057 106 51 2 24 127 11 115 8.20e-28 108
MS.gene46217.t1 AT5G06100 38.255 149 81 2 1 138 1 149 8.22e-28 112
MS.gene46217.t1 AT5G06100 38.255 149 81 2 1 138 1 149 8.22e-28 112
MS.gene46217.t1 AT5G06100 38.255 149 81 2 1 138 1 149 8.22e-28 112
MS.gene46217.t1 AT5G06100 38.255 149 81 2 1 138 1 149 8.22e-28 112
MS.gene46217.t1 AT3G08500 48.276 116 58 2 11 124 18 133 1.03e-27 110
MS.gene46217.t1 AT3G29020 46.535 101 54 0 24 124 67 167 1.04e-27 109
MS.gene46217.t1 AT3G61250 42.748 131 69 4 24 151 14 141 1.64e-27 108
MS.gene46217.t1 AT3G11440 44.828 116 63 1 24 138 43 158 1.78e-27 112
MS.gene46217.t1 AT3G11440 44.828 116 63 1 24 138 43 158 1.78e-27 112
MS.gene46217.t1 AT3G11440 44.828 116 63 1 24 138 43 158 1.78e-27 112
MS.gene46217.t1 AT4G01680 47.826 115 55 3 24 136 14 125 9.63e-27 105
MS.gene46217.t1 AT5G12870 49.020 102 51 1 24 124 20 121 1.52e-26 105
MS.gene46217.t1 AT5G55020 48.214 112 57 1 24 134 28 139 2.13e-26 108
MS.gene46217.t1 AT1G18710 42.857 119 65 2 24 141 14 130 2.30e-26 105
MS.gene46217.t1 AT4G38620 49.515 103 49 2 24 124 14 115 3.35e-26 105
MS.gene46217.t1 AT3G46130 44.167 120 63 3 18 135 6 123 3.74e-26 104
MS.gene46217.t1 AT5G10280 43.651 126 65 4 16 139 7 128 3.85e-26 105
MS.gene46217.t1 AT4G34990 44.068 118 61 3 24 139 14 128 3.99e-26 104
MS.gene46217.t1 AT3G30210 45.794 107 55 2 24 128 29 134 4.19e-26 104
MS.gene46217.t1 AT5G59780 42.982 114 62 2 24 135 10 122 4.54e-26 103
MS.gene46217.t1 AT2G16720 45.217 115 58 3 24 136 14 125 4.78e-26 104
MS.gene46217.t1 AT5G14750 32.955 176 99 4 12 174 6 175 5.20e-26 102
MS.gene46217.t1 AT4G01680 47.826 115 55 3 24 136 14 125 5.62e-26 105
MS.gene46217.t1 AT4G05100 43.089 123 66 3 18 139 10 129 8.23e-26 104
MS.gene46217.t1 AT3G13890 38.889 144 84 3 19 159 8 150 8.39e-26 105
MS.gene46217.t1 AT1G35515 44.118 102 56 1 24 124 14 115 9.19e-26 102
MS.gene46217.t1 AT5G60890 46.602 103 52 2 24 124 14 115 9.49e-26 103
MS.gene46217.t1 AT1G18570 44.348 115 59 3 24 136 15 126 1.18e-25 104
MS.gene46217.t1 AT5G16770 44.000 125 64 4 17 139 8 128 1.28e-25 104
MS.gene46217.t1 AT5G16770 44.000 125 64 4 17 139 8 128 1.28e-25 104
MS.gene46217.t1 AT4G09460 48.544 103 50 2 24 124 14 115 1.65e-25 102
MS.gene46217.t1 AT1G74080 45.098 102 53 2 24 123 14 114 1.73e-25 103
MS.gene46217.t1 AT2G26960 45.082 122 61 3 13 129 8 128 1.76e-25 105
MS.gene46217.t1 AT4G21440 42.742 124 67 3 17 139 8 128 2.26e-25 103
MS.gene46217.t1 AT5G16770 44.000 125 64 4 17 139 8 128 2.33e-25 103
MS.gene46217.t1 AT5G16770 44.000 125 64 4 17 139 8 128 2.33e-25 103
MS.gene46217.t1 AT5G07690 44.068 118 61 3 24 139 14 128 2.47e-25 103
MS.gene46217.t1 AT1G57560 44.068 118 61 3 24 139 14 128 2.94e-25 102
MS.gene46217.t1 AT5G61420 42.623 122 65 3 24 143 14 132 3.19e-25 103
MS.gene46217.t1 AT1G57560 44.068 118 61 3 24 139 14 128 3.20e-25 102
MS.gene46217.t1 AT3G60460 48.148 108 52 3 24 129 13 118 3.23e-25 102
MS.gene46217.t1 AT5G40330 39.844 128 69 3 24 144 14 140 3.36e-25 100
MS.gene46217.t1 AT2G25230 41.071 112 66 0 24 135 26 137 3.77e-25 100
MS.gene46217.t1 AT1G09540 48.544 103 50 2 24 124 14 115 3.95e-25 103
MS.gene46217.t1 AT1G22640 46.602 103 52 2 24 124 14 115 3.95e-25 101
MS.gene46217.t1 AT4G17785 38.889 144 77 4 17 152 8 148 4.61e-25 103
MS.gene46217.t1 AT4G13480 46.602 103 52 2 24 124 8 109 5.10e-25 101
MS.gene46217.t1 AT5G07700 43.220 118 62 3 24 139 14 128 6.09e-25 102
MS.gene46217.t1 AT5G07700 43.220 118 62 3 24 139 14 128 6.09e-25 102
MS.gene46217.t1 AT3G13890 37.500 152 84 3 19 159 8 159 7.30e-25 102
MS.gene46217.t1 AT1G08810 49.020 102 51 1 24 124 14 115 7.64e-25 101
MS.gene46217.t1 AT4G17785 38.889 144 77 4 17 152 8 148 8.76e-25 102
MS.gene46217.t1 AT3G28470 43.220 118 62 3 24 139 14 128 9.38e-25 101
MS.gene46217.t1 AT1G56160 47.706 109 53 3 21 126 12 119 1.04e-24 101
MS.gene46217.t1 AT3G02940 42.400 125 66 4 17 139 8 128 1.11e-24 101
MS.gene46217.t1 AT3G27920 36.879 141 82 3 18 152 10 149 1.12e-24 99.8
MS.gene46217.t1 AT1G25340 40.496 121 69 2 6 124 2 121 1.14e-24 100
MS.gene46217.t1 AT3G02940 42.400 125 66 4 17 139 8 128 1.84e-24 100
MS.gene46217.t1 AT3G02940 42.400 125 66 4 17 139 8 128 1.84e-24 100
MS.gene46217.t1 AT3G48920 49.020 102 49 2 24 123 20 120 1.95e-24 99.8
MS.gene46217.t1 AT5G65230 41.732 127 68 4 15 139 6 128 2.03e-24 100
MS.gene46217.t1 AT1G63910 48.148 108 54 2 19 124 8 115 2.45e-24 101
MS.gene46217.t1 AT4G01680 43.307 127 55 3 24 136 14 137 3.03e-24 100
MS.gene46217.t1 AT5G52600 39.850 133 70 4 24 147 14 145 3.17e-24 97.8
MS.gene46217.t1 AT3G12720 45.631 103 53 2 24 124 24 125 3.90e-24 99.8
MS.gene46217.t1 AT1G25340 39.496 119 68 1 6 124 2 116 4.53e-24 99.8
MS.gene46217.t1 AT1G25340 39.496 119 68 1 6 124 2 116 4.71e-24 99.0
MS.gene46217.t1 AT5G54230 41.176 119 67 2 24 141 14 130 5.16e-24 99.8
MS.gene46217.t1 AT1G16490 44.762 105 57 1 24 127 16 120 6.66e-24 98.6
MS.gene46217.t1 AT3G24310 45.631 103 53 2 24 124 20 121 6.94e-24 98.6
MS.gene46217.t1 AT5G15310 41.880 117 65 2 24 139 14 128 8.23e-24 99.4
MS.gene46217.t1 AT5G15310 41.880 117 65 2 24 139 14 128 8.77e-24 99.4
MS.gene46217.t1 AT5G26660 41.732 127 69 3 24 148 14 137 9.63e-24 99.8
MS.gene46217.t1 AT5G15310 41.880 117 65 2 24 139 14 128 1.36e-23 97.1
MS.gene46217.t1 AT3G62610 42.241 116 66 1 24 138 14 129 1.80e-23 98.6
MS.gene46217.t1 AT3G01140 42.982 114 62 2 24 136 14 125 1.94e-23 98.6
MS.gene46217.t1 AT3G01140 42.982 114 62 2 24 136 57 168 2.95e-23 98.6
MS.gene46217.t1 AT1G06180 45.631 103 53 2 24 124 14 115 3.36e-23 95.9
MS.gene46217.t1 AT4G12350 39.831 118 66 3 24 139 14 128 3.80e-23 96.7
MS.gene46217.t1 AT1G34670 40.323 124 70 3 17 139 8 128 3.90e-23 98.2
MS.gene46217.t1 AT5G35550 45.631 103 53 2 24 124 16 117 4.07e-23 96.3
MS.gene46217.t1 AT3G13540 39.200 125 73 2 24 147 25 147 5.32e-23 95.5
MS.gene46217.t1 AT5G39700 42.424 99 57 0 25 123 57 155 6.24e-23 94.0
MS.gene46217.t1 AT5G62470 43.564 101 57 0 24 124 14 114 7.19e-23 97.1
MS.gene46217.t1 AT1G74650 46.078 102 54 1 24 124 14 115 7.54e-23 96.7
MS.gene46217.t1 AT3G23250 43.689 103 55 2 24 124 14 115 8.19e-23 95.9
MS.gene46217.t1 AT2G47190 42.500 120 63 3 7 124 8 123 1.28e-22 95.1
MS.gene46217.t1 AT3G12820 45.631 103 53 2 24 124 16 117 1.39e-22 94.4
MS.gene46217.t1 AT2G31180 42.056 107 61 1 24 129 14 120 2.08e-22 94.0
MS.gene46217.t1 AT4G22680 39.831 118 66 3 24 139 14 128 2.14e-22 94.4
MS.gene46217.t1 AT5G49330 45.045 111 59 2 24 133 14 123 2.15e-22 95.9
MS.gene46217.t1 AT3G28910 44.954 109 58 2 17 124 8 115 2.63e-22 95.1
MS.gene46217.t1 AT1G79180 44.660 103 54 2 24 124 16 117 3.51e-22 94.4
MS.gene46217.t1 AT3G53200 54.930 71 32 0 57 127 12 82 3.63e-22 92.4
MS.gene46217.t1 AT3G47600 45.098 102 55 1 24 124 14 115 4.11e-22 94.7
MS.gene46217.t1 AT1G66230 38.710 124 68 4 21 139 8 128 4.29e-22 94.0
MS.gene46217.t1 AT5G62470 45.098 102 55 1 24 124 14 115 4.55e-22 95.1
MS.gene46217.t1 AT5G14340 38.983 118 67 3 24 139 26 140 8.15e-22 92.8
MS.gene46217.t1 AT3G27810 43.443 122 61 3 24 143 22 137 8.24e-22 92.0
MS.gene46217.t1 AT4G37780 44.660 103 55 2 24 124 14 116 1.27e-21 92.8
MS.gene46217.t1 AT2G36890 43.636 110 58 3 24 130 14 122 2.16e-21 92.0
MS.gene46217.t1 AT5G65790 44.660 103 55 2 24 124 14 116 2.64e-21 93.2
MS.gene46217.t1 AT2G36890 43.636 110 58 3 24 130 55 163 2.77e-21 92.4
MS.gene46217.t1 AT5G16600 39.516 124 67 4 21 139 8 128 2.83e-21 92.4
MS.gene46217.t1 AT2G47460 43.137 102 57 1 24 124 14 115 2.89e-21 92.8
MS.gene46217.t1 AT4G25560 43.689 103 55 2 24 124 12 113 5.03e-21 90.9
MS.gene46217.t1 AT2G26950 42.593 108 51 3 23 125 17 118 5.39e-21 92.4
MS.gene46217.t1 AT5G52260 44.660 103 54 2 24 124 14 115 5.56e-21 90.5
MS.gene46217.t1 AT5G40350 44.118 102 54 2 24 123 19 119 5.59e-21 89.4
MS.gene46217.t1 AT5G23000 38.028 142 77 5 24 157 14 152 5.60e-21 91.7
MS.gene46217.t1 AT5G59780 38.235 136 77 2 41 176 11 139 5.71e-21 89.4
MS.gene46217.t1 AT1G68320 40.777 103 58 2 24 124 21 122 5.84e-21 90.9
MS.gene46217.t1 AT3G49690 43.689 103 56 2 24 124 14 116 9.82e-21 90.5
MS.gene46217.t1 AT3G01530 41.818 110 61 2 17 124 20 128 1.12e-20 88.2
MS.gene46217.t1 AT5G40430 41.346 104 60 1 20 123 50 152 2.17e-20 88.6
MS.gene46217.t1 AT3G46130 48.101 79 41 0 57 135 23 101 2.24e-20 88.2
MS.gene46217.t1 AT3G46130 48.101 79 41 0 57 135 13 91 2.93e-20 87.8
MS.gene46217.t1 AT5G57620 43.689 103 56 2 24 124 14 116 3.06e-20 89.7
MS.gene46217.t1 AT5G14750 51.471 68 33 0 57 124 18 85 9.46e-20 84.7
MS.gene46217.t1 AT1G48000 40.594 101 59 1 24 123 34 134 2.97e-19 85.1
MS.gene46217.t1 AT5G26660 44.565 92 49 1 57 148 17 106 5.99e-19 85.9
MS.gene46217.t1 AT5G62320 40.541 111 54 3 24 124 15 123 1.76e-18 83.2
MS.gene46217.t1 AT3G27810 49.425 87 39 1 57 143 7 88 2.78e-18 81.3
MS.gene46217.t1 AT1G79180 34.074 135 55 1 24 124 16 150 5.09e-18 83.2
MS.gene46217.t1 AT3G12820 52.941 68 32 0 57 124 2 69 6.20e-18 80.5
MS.gene46217.t1 AT2G02820 34.343 99 65 0 26 124 32 130 6.38e-18 83.2
MS.gene46217.t1 AT5G35550 54.412 68 31 0 57 124 53 120 7.95e-18 81.6
MS.gene46217.t1 AT2G02820 34.343 99 65 0 26 124 32 130 1.74e-17 82.8
MS.gene46217.t1 AT2G02820 34.343 99 65 0 26 124 32 130 2.15e-17 82.4
MS.gene46217.t1 AT1G14350 34.343 99 65 0 26 124 27 125 2.36e-17 82.4
MS.gene46217.t1 AT1G14350 34.343 99 65 0 26 124 27 125 2.36e-17 82.4
MS.gene46217.t1 AT5G40350 52.239 67 32 0 57 123 8 74 2.77e-17 78.2
MS.gene46217.t1 AT3G06490 39.474 114 66 2 13 124 10 122 3.38e-17 80.9
MS.gene46217.t1 AT1G66370 31.159 138 82 4 24 153 10 142 1.15e-16 78.2
MS.gene46217.t1 AT1G66380 32.824 131 78 3 24 148 10 136 2.20e-16 74.7
MS.gene46217.t1 AT5G49620 38.532 109 66 1 17 124 21 129 2.95e-16 78.2
MS.gene46217.t1 AT3G47600 48.529 68 35 0 57 124 42 109 6.88e-16 77.0
MS.gene46217.t1 AT1G56650 31.111 135 78 3 24 147 10 140 2.70e-15 74.3
MS.gene46217.t1 AT3G18100 40.426 94 56 0 24 117 546 639 1.09e-14 74.7
MS.gene46217.t1 AT3G18100 40.426 94 56 0 24 117 498 591 1.12e-14 74.7
MS.gene46217.t1 AT3G18100 40.426 94 56 0 24 117 333 426 1.62e-14 74.3
MS.gene46217.t1 AT3G18100 40.426 94 56 0 24 117 385 478 1.72e-14 74.3
MS.gene46217.t1 AT1G66390 31.387 137 83 3 24 153 10 142 5.31e-14 70.9
MS.gene46217.t1 AT5G49620 34.146 123 66 2 17 124 21 143 7.41e-13 68.2
MS.gene46217.t1 AT1G71030 44.615 65 36 0 60 124 5 69 8.72e-13 65.9
MS.gene46217.t1 AT1G71030 44.615 65 36 0 60 124 19 83 1.04e-12 66.2
MS.gene46217.t1 AT1G66380 35.484 93 59 1 57 148 11 103 2.01e-12 63.2
MS.gene46217.t1 AT1G22640 49.123 57 29 0 68 124 2 58 2.46e-12 65.1
MS.gene46217.t1 AT5G14750 45.614 57 31 0 68 124 2 58 3.28e-12 63.5
MS.gene46217.t1 AT5G14750 45.614 57 31 0 68 124 2 58 3.28e-12 63.5
MS.gene46217.t1 AT1G18960 33.654 104 65 3 22 124 8 108 6.81e-12 65.5
MS.gene46217.t1 AT2G37630 35.354 99 61 1 22 117 2 100 7.38e-12 65.9
MS.gene46217.t1 AT5G59780 43.860 57 32 0 79 135 1 57 9.00e-12 62.8
MS.gene46217.t1 AT3G46130 45.614 57 31 0 79 135 1 57 1.21e-11 63.2
MS.gene46217.t1 AT3G23250 44.828 58 32 0 67 124 1 58 9.50e-11 61.2

Find 82 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACGACGGTGATTATTATA+AGG 0.303478 5.3:+67057727 MS.gene46217:CDS
CACTTTCGAAGTGTTGAATC+AGG 0.309175 5.3:-67058100 None:intergenic
TTATCCTCCGCCGGTGTAAA+AGG 0.319601 5.3:-67057455 None:intergenic
AACGGAATCCCCGGTCGTTC+TGG 0.325808 5.3:+67057377 MS.gene46217:CDS
TTATAAACGTCCTTGTGTTA+TGG 0.349334 5.3:+67057772 MS.gene46217:CDS
ATTGAAGCACATGCAGTTCA+TGG 0.355261 5.3:+67057485 MS.gene46217:CDS
ACGATTTCTCGTCTTCTTCC+AGG 0.363590 5.3:+67057521 MS.gene46217:CDS
GCATGATAGCAGAGGAAGTT+AGG 0.373360 5.3:+67058038 MS.gene46217:CDS
GATGATGACGCAGGGAATAA+AGG 0.383743 5.3:+67057851 MS.gene46217:CDS
ACCACCGTTTGAATTCGAAT+TGG 0.391041 5.3:-67057246 None:intergenic
GTGATAAAGTGAAGGGTTCA+TGG 0.407783 5.3:+67057282 MS.gene46217:CDS
AGGAAAACGGTGCAAGAAAC+TGG 0.414736 5.3:+67057342 MS.gene46217:CDS
ACCGGTGGAACCGTTGTAAC+CGG 0.417169 5.3:-67057623 None:intergenic
ATTCCCACCGGTGTGATAAC+CGG 0.422805 5.3:+67057686 MS.gene46217:CDS
AGATGAAACATTGGTGAAAC+TGG 0.432466 5.3:+67057316 MS.gene46217:CDS
CTTTGAACAACCGTTGCAAC+CGG 0.434972 5.3:-67057641 None:intergenic
ACGGAATCCCCGGTCGTTCT+GGG 0.435316 5.3:+67057378 MS.gene46217:CDS
ATGCAGTTCATGGAAACAAA+TGG 0.435359 5.3:+67057495 MS.gene46217:CDS
GATAACATGCGCCTTGGTGG+TGG 0.451447 5.3:+67058070 MS.gene46217:CDS
AAGGGTTCCAACGGCGGTGC+CGG 0.461128 5.3:+67057661 MS.gene46217:CDS
AACTCTCCGCCGACGTCGCA+CGG 0.462717 5.3:+67057580 MS.gene46217:CDS
CGGTTGCAACGGTTGTTCAA+AGG 0.465093 5.3:+67057642 MS.gene46217:CDS
CTAGAGCCGCCGTGCGACGT+CGG 0.466130 5.3:-67057589 None:intergenic
GGTTGCAACGGTTGTTCAAA+GGG 0.473960 5.3:+67057643 MS.gene46217:CDS
ATCACACCGGTGGGAATCAC+CGG 0.476511 5.3:-67057680 None:intergenic
GGCTCTAGCAGCGGTTTCAC+CGG 0.495443 5.3:+67057604 MS.gene46217:CDS
TATAAGGATTTGTTGAGTCT+CGG 0.499886 5.3:+67057743 MS.gene46217:CDS
GCAAGACTTCCCAGAACGAC+CGG 0.501357 5.3:-67057387 None:intergenic
GTCACGTGACGGTGAAGAAA+CGG 0.504415 5.3:+67057820 MS.gene46217:CDS
ACCGGTTACAACGGTTCCAC+CGG 0.509986 5.3:+67057622 MS.gene46217:CDS
AACGGTTCCACCGGTTGCAA+CGG 0.511374 5.3:+67057631 MS.gene46217:CDS
ATAAAGGTGTTAACGTGGTT+AGG 0.512437 5.3:+67057867 MS.gene46217:CDS
AATTCCAATTCGAATTCAAA+CGG 0.513949 5.3:+67057242 MS.gene46217:CDS
TGCAGTTCATGGAAACAAAT+GGG 0.515010 5.3:+67057496 MS.gene46217:CDS
GGAATCACCGGCACCGCCGT+TGG 0.524579 5.3:-67057668 None:intergenic
TCTTCTTCTTTCAGAAAACC+AGG 0.531221 5.3:-67057911 None:intergenic
GTTGATAACATGCGCCTTGG+TGG 0.538563 5.3:+67058067 MS.gene46217:CDS
CAAGACTTCCCAGAACGACC+GGG 0.539420 5.3:-67057386 None:intergenic
GGAAGTCTTGCCGTCTGCGG+TGG 0.545828 5.3:+67057399 MS.gene46217:CDS
TCGTTAAGTTTGTTTCCACC+TGG 0.549818 5.3:+67057893 MS.gene46217:CDS
GAGCCGCCGTGCGACGTCGG+CGG 0.550413 5.3:-67057586 None:intergenic
GTGATAAGCAACGGAATCCC+CGG 0.556212 5.3:+67057368 MS.gene46217:CDS
TGAACAACCGTTGCAACCGG+TGG 0.559619 5.3:-67057638 None:intergenic
ATAACATGCGCCTTGGTGGT+GGG 0.567081 5.3:+67058071 MS.gene46217:CDS
AAAGGAAGGTGTTGAACGGT+TGG 0.567448 5.3:-67057437 None:intergenic
AATTCGAATTCAAACGGTGG+TGG 0.570811 5.3:+67057248 MS.gene46217:CDS
CTGGGAAGTCTTGCCGTCTG+CGG 0.576361 5.3:+67057396 MS.gene46217:CDS
GAGAATAATAGCGGGTCACG+TGG 0.581994 5.3:+67057797 MS.gene46217:CDS
TCGCACGGCGGCTCTAGCAG+CGG 0.583499 5.3:+67057595 MS.gene46217:CDS
CCTCCGCCGGTGTAAAAGGA+AGG 0.589718 5.3:-67057451 None:intergenic
AACTGGTCTGTGATAAGCAA+CGG 0.591578 5.3:+67057359 MS.gene46217:CDS
GTGAAACTGGTGAAGGAAAA+CGG 0.592557 5.3:+67057329 MS.gene46217:CDS
ATTGCGTTATCTGTTCTACC+TGG 0.594559 5.3:-67057539 None:intergenic
GCGGTGCCGGTGATTCCCAC+CGG 0.594901 5.3:+67057674 MS.gene46217:CDS
TGTTCAAAGGGTTCCAACGG+CGG 0.597209 5.3:+67057655 MS.gene46217:CDS
TATGTTGATAACATGCGCCT+TGG 0.597244 5.3:+67058064 MS.gene46217:CDS
ATGATGATGTTATCCTCCGC+CGG 0.600301 5.3:-67057464 None:intergenic
TGAAAACGGTGATAAAGTGA+AGG 0.601532 5.3:+67057274 MS.gene46217:CDS
GCTGATTACACCACCGCAGA+CGG 0.606009 5.3:-67057409 None:intergenic
GGTTGTTCAAAGGGTTCCAA+CGG 0.607530 5.3:+67057652 MS.gene46217:CDS
AGCGGTTTCACCGGTTACAA+CGG 0.618288 5.3:+67057613 MS.gene46217:CDS
GAAAACGGTGATAAAGTGAA+GGG 0.623051 5.3:+67057275 MS.gene46217:CDS
AACGGTGGTGGTGATGAAAA+CGG 0.632028 5.3:+67057260 MS.gene46217:CDS
GTTATGGTTGAGAATAATAG+CGG 0.638175 5.3:+67057788 MS.gene46217:CDS
TTTCCGGTTATCACACCGGT+GGG 0.639604 5.3:-67057689 None:intergenic
TCTTCTTTCAGAAAACCAGG+TGG 0.639884 5.3:-67057908 None:intergenic
TTATGGTTGAGAATAATAGC+GGG 0.641955 5.3:+67057789 MS.gene46217:CDS
GGGTCACGTGGGTCACGTGA+CGG 0.646108 5.3:+67057809 MS.gene46217:CDS
TGTAAAAGGAAGGTGTTGAA+CGG 0.650810 5.3:-67057441 None:intergenic
AGAATAATAGCGGGTCACGT+GGG 0.660707 5.3:+67057798 MS.gene46217:CDS
AACATTGGTGAAACTGGTGA+AGG 0.661429 5.3:+67057322 MS.gene46217:CDS
TCCAATTCGAATTCAAACGG+TGG 0.661563 5.3:+67057245 MS.gene46217:CDS
GTAACGGAAGATGATGACGC+AGG 0.670273 5.3:+67057842 MS.gene46217:CDS
TAACGGAAGATGATGACGCA+GGG 0.671779 5.3:+67057843 MS.gene46217:CDS
CAGGAGCAAACCCACCACCA+AGG 0.672680 5.3:-67058081 None:intergenic
TTATTCTCAACCATAACACA+AGG 0.679685 5.3:-67057782 None:intergenic
AAGACTTCCCAGAACGACCG+GGG 0.681485 5.3:-67057385 None:intergenic
TCTTCAGCGCATGATAGCAG+AGG 0.681841 5.3:+67058030 MS.gene46217:CDS
TGACGGTGAAGAAACGGTAA+CGG 0.688161 5.3:+67057826 MS.gene46217:CDS
CGTGTGAATGAAAGTTACGA+CGG 0.718108 5.3:+67057713 MS.gene46217:CDS
AGGGAATAAAGGTGTTAACG+TGG 0.740809 5.3:+67057862 MS.gene46217:CDS
TCTCCGCCGACGTCGCACGG+CGG 0.771881 5.3:+67057583 MS.gene46217:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AATTCCAATTCGAATTCAAA+CGG + chr5.3:67057242-67057261 MS.gene46217:CDS 25.0%
! ATAACGCAATAAAAAATCAC+TGG + chr5.3:67057552-67057571 MS.gene46217:CDS 25.0%
! TAAAAACGAAGATGAAACAT+TGG + chr5.3:67057307-67057326 MS.gene46217:CDS 25.0%
! TACTGAAAAATGAGAAATTG+AGG + chr5.3:67058002-67058021 MS.gene46217:CDS 25.0%
GAAAAATGAGAAATTGAGGT+CGG + chr5.3:67058006-67058025 MS.gene46217:CDS 30.0%
GTTATGGTTGAGAATAATAG+CGG + chr5.3:67057788-67057807 MS.gene46217:CDS 30.0%
TTACGACGGTGATTATTATA+AGG + chr5.3:67057727-67057746 MS.gene46217:CDS 30.0%
TTATAAACGTCCTTGTGTTA+TGG + chr5.3:67057772-67057791 MS.gene46217:CDS 30.0%
TTATGGTTGAGAATAATAGC+GGG + chr5.3:67057789-67057808 MS.gene46217:CDS 30.0%
TTATTCTCAACCATAACACA+AGG - chr5.3:67057785-67057804 None:intergenic 30.0%
!! TATAAGGATTTGTTGAGTCT+CGG + chr5.3:67057743-67057762 MS.gene46217:CDS 30.0%
AGATGAAACATTGGTGAAAC+TGG + chr5.3:67057316-67057335 MS.gene46217:CDS 35.0%
ATGCAGTTCATGGAAACAAA+TGG + chr5.3:67057495-67057514 MS.gene46217:CDS 35.0%
GAAAACGGTGATAAAGTGAA+GGG + chr5.3:67057275-67057294 MS.gene46217:CDS 35.0%
TCTTCTTCTTTCAGAAAACC+AGG - chr5.3:67057914-67057933 None:intergenic 35.0%
TGAAAACGGTGATAAAGTGA+AGG + chr5.3:67057274-67057293 MS.gene46217:CDS 35.0%
TGCAGTTCATGGAAACAAAT+GGG + chr5.3:67057496-67057515 MS.gene46217:CDS 35.0%
! ACTTTCATTCACACGTTTTC+CGG - chr5.3:67057708-67057727 None:intergenic 35.0%
!! ATAAAGGTGTTAACGTGGTT+AGG + chr5.3:67057867-67057886 MS.gene46217:CDS 35.0%
!! TGTAAAAGGAAGGTGTTGAA+CGG - chr5.3:67057444-67057463 None:intergenic 35.0%
AACATTGGTGAAACTGGTGA+AGG + chr5.3:67057322-67057341 MS.gene46217:CDS 40.0%
AATTCGAATTCAAACGGTGG+TGG + chr5.3:67057248-67057267 MS.gene46217:CDS 40.0%
ACCACCGTTTGAATTCGAAT+TGG - chr5.3:67057249-67057268 None:intergenic 40.0%
ATTGAAGCACATGCAGTTCA+TGG + chr5.3:67057485-67057504 MS.gene46217:CDS 40.0%
ATTGCGTTATCTGTTCTACC+TGG - chr5.3:67057542-67057561 None:intergenic 40.0%
CGTGTGAATGAAAGTTACGA+CGG + chr5.3:67057713-67057732 MS.gene46217:CDS 40.0%
GTGAAACTGGTGAAGGAAAA+CGG + chr5.3:67057329-67057348 MS.gene46217:CDS 40.0%
GTGATAAAGTGAAGGGTTCA+TGG + chr5.3:67057282-67057301 MS.gene46217:CDS 40.0%
TCCAATTCGAATTCAAACGG+TGG + chr5.3:67057245-67057264 MS.gene46217:CDS 40.0%
TCTTCTTTCAGAAAACCAGG+TGG - chr5.3:67057911-67057930 None:intergenic 40.0%
! AACTGGTCTGTGATAAGCAA+CGG + chr5.3:67057359-67057378 MS.gene46217:CDS 40.0%
! TCAACACCTTCCTTTTACAC+CGG + chr5.3:67057445-67057464 MS.gene46217:CDS 40.0%
! TCGTTAAGTTTGTTTCCACC+TGG + chr5.3:67057893-67057912 MS.gene46217:CDS 40.0%
!! AGGGAATAAAGGTGTTAACG+TGG + chr5.3:67057862-67057881 MS.gene46217:CDS 40.0%
!! CACTTTCGAAGTGTTGAATC+AGG - chr5.3:67058103-67058122 None:intergenic 40.0%
!! TATGTTGATAACATGCGCCT+TGG + chr5.3:67058064-67058083 MS.gene46217:CDS 40.0%
ACGATTTCTCGTCTTCTTCC+AGG + chr5.3:67057521-67057540 MS.gene46217:CDS 45.0%
AGGAAAACGGTGCAAGAAAC+TGG + chr5.3:67057342-67057361 MS.gene46217:CDS 45.0%
CTTTGAACAACCGTTGCAAC+CGG - chr5.3:67057644-67057663 None:intergenic 45.0%
GCATGATAGCAGAGGAAGTT+AGG + chr5.3:67058038-67058057 MS.gene46217:CDS 45.0%
GGTTGCAACGGTTGTTCAAA+GGG + chr5.3:67057643-67057662 MS.gene46217:CDS 45.0%
GGTTGTTCAAAGGGTTCCAA+CGG + chr5.3:67057652-67057671 MS.gene46217:CDS 45.0%
TGACGGTGAAGAAACGGTAA+CGG + chr5.3:67057826-67057845 MS.gene46217:CDS 45.0%
! AACGGTGGTGGTGATGAAAA+CGG + chr5.3:67057260-67057279 MS.gene46217:CDS 45.0%
! ACGTTTTCCGGTTATCACAC+CGG - chr5.3:67057696-67057715 None:intergenic 45.0%
! ATGATGATGTTATCCTCCGC+CGG - chr5.3:67057467-67057486 None:intergenic 45.0%
! GATGATGACGCAGGGAATAA+AGG + chr5.3:67057851-67057870 MS.gene46217:CDS 45.0%
! TAACGGAAGATGATGACGCA+GGG + chr5.3:67057843-67057862 MS.gene46217:CDS 45.0%
!! AAAGGAAGGTGTTGAACGGT+TGG - chr5.3:67057440-67057459 None:intergenic 45.0%
!! AGAATAATAGCGGGTCACGT+GGG + chr5.3:67057798-67057817 MS.gene46217:CDS 45.0%
ATTCCCACCGGTGTGATAAC+CGG + chr5.3:67057686-67057705 MS.gene46217:CDS 50.0%
CGGTTGCAACGGTTGTTCAA+AGG + chr5.3:67057642-67057661 MS.gene46217:CDS 50.0%
GTCACGTGACGGTGAAGAAA+CGG + chr5.3:67057820-67057839 MS.gene46217:CDS 50.0%
GTGATAAGCAACGGAATCCC+CGG + chr5.3:67057368-67057387 MS.gene46217:CDS 50.0%
TCTTCAGCGCATGATAGCAG+AGG + chr5.3:67058030-67058049 MS.gene46217:CDS 50.0%
TGTTCAAAGGGTTCCAACGG+CGG + chr5.3:67057655-67057674 MS.gene46217:CDS 50.0%
TTATCCTCCGCCGGTGTAAA+AGG - chr5.3:67057458-67057477 None:intergenic 50.0%
TTTCCGGTTATCACACCGGT+GGG - chr5.3:67057692-67057711 None:intergenic 50.0%
! ACACCTTCCTTTTACACCGG+CGG + chr5.3:67057448-67057467 MS.gene46217:CDS 50.0%
! AGCGGTTTCACCGGTTACAA+CGG + chr5.3:67057613-67057632 MS.gene46217:CDS 50.0%
! ATAACATGCGCCTTGGTGGT+GGG + chr5.3:67058071-67058090 MS.gene46217:CDS 50.0%
! GTAACGGAAGATGATGACGC+AGG + chr5.3:67057842-67057861 MS.gene46217:CDS 50.0%
! TTTTCCGGTTATCACACCGG+TGG - chr5.3:67057693-67057712 None:intergenic 50.0%
!! GAGAATAATAGCGGGTCACG+TGG + chr5.3:67057797-67057816 MS.gene46217:CDS 50.0%
!! GTTGATAACATGCGCCTTGG+TGG + chr5.3:67058067-67058086 MS.gene46217:CDS 50.0%
AAGACTTCCCAGAACGACCG+GGG - chr5.3:67057388-67057407 None:intergenic 55.0%
ACCGGTGGAACCGTTGTAAC+CGG - chr5.3:67057626-67057645 None:intergenic 55.0%
ACCGGTTACAACGGTTCCAC+CGG + chr5.3:67057622-67057641 MS.gene46217:CDS 55.0%
ATCACACCGGTGGGAATCAC+CGG - chr5.3:67057683-67057702 None:intergenic 55.0%
CAAGACTTCCCAGAACGACC+GGG - chr5.3:67057389-67057408 None:intergenic 55.0%
GATAACATGCGCCTTGGTGG+TGG + chr5.3:67058070-67058089 MS.gene46217:CDS 55.0%
GCAAGACTTCCCAGAACGAC+CGG - chr5.3:67057390-67057409 None:intergenic 55.0%
GCTGATTACACCACCGCAGA+CGG - chr5.3:67057412-67057431 None:intergenic 55.0%
TGAACAACCGTTGCAACCGG+TGG - chr5.3:67057641-67057660 None:intergenic 55.0%
! AACGGTTCCACCGGTTGCAA+CGG + chr5.3:67057631-67057650 MS.gene46217:CDS 55.0%
AACGGAATCCCCGGTCGTTC+TGG + chr5.3:67057377-67057396 MS.gene46217:CDS 60.0%
ACGGAATCCCCGGTCGTTCT+GGG + chr5.3:67057378-67057397 MS.gene46217:CDS 60.0%
CAGGAGCAAACCCACCACCA+AGG - chr5.3:67058084-67058103 None:intergenic 60.0%
CCTCCGCCGGTGTAAAAGGA+AGG - chr5.3:67057454-67057473 None:intergenic 60.0%
CTGGGAAGTCTTGCCGTCTG+CGG + chr5.3:67057396-67057415 MS.gene46217:CDS 60.0%
! CCTTCCTTTTACACCGGCGG+AGG + chr5.3:67057451-67057470 MS.gene46217:CDS 60.0%
! GGCTCTAGCAGCGGTTTCAC+CGG + chr5.3:67057604-67057623 MS.gene46217:CDS 60.0%
AACTCTCCGCCGACGTCGCA+CGG + chr5.3:67057580-67057599 MS.gene46217:CDS 65.0%
AAGGGTTCCAACGGCGGTGC+CGG + chr5.3:67057661-67057680 MS.gene46217:CDS 65.0%
GGAAGTCTTGCCGTCTGCGG+TGG + chr5.3:67057399-67057418 MS.gene46217:CDS 65.0%
GGGTCACGTGGGTCACGTGA+CGG + chr5.3:67057809-67057828 MS.gene46217:CDS 65.0%
CTAGAGCCGCCGTGCGACGT+CGG - chr5.3:67057592-67057611 None:intergenic 70.0%
GGAATCACCGGCACCGCCGT+TGG - chr5.3:67057671-67057690 None:intergenic 70.0%
! TCGCACGGCGGCTCTAGCAG+CGG + chr5.3:67057595-67057614 MS.gene46217:CDS 70.0%
!! GCGGTGCCGGTGATTCCCAC+CGG + chr5.3:67057674-67057693 MS.gene46217:CDS 70.0%
TCTCCGCCGACGTCGCACGG+CGG + chr5.3:67057583-67057602 MS.gene46217:CDS 75.0%
! GAGCCGCCGTGCGACGTCGG+CGG - chr5.3:67057589-67057608 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 67057224 67058123 67057224 ID=MS.gene46217
chr5.3 mRNA 67057224 67058123 67057224 ID=MS.gene46217.t1;Parent=MS.gene46217
chr5.3 exon 67057224 67058123 67057224 ID=MS.gene46217.t1.exon1;Parent=MS.gene46217.t1
chr5.3 CDS 67057224 67058123 67057224 ID=cds.MS.gene46217.t1;Parent=MS.gene46217.t1
Gene Sequence

>MS.gene46217

ATGATCAGTGCAAATTCGAATTCCAATTCGAATTCAAACGGTGGTGGTGATGAAAACGGTGATAAAGTGAAGGGTTCATGGAGTAAAAACGAAGATGAAACATTGGTGAAACTGGTGAAGGAAAACGGTGCAAGAAACTGGTCTGTGATAAGCAACGGAATCCCCGGTCGTTCTGGGAAGTCTTGCCGTCTGCGGTGGTGTAATCAGCTGAGTCCAACCGTTCAACACCTTCCTTTTACACCGGCGGAGGATAACATCATCATTGAAGCACATGCAGTTCATGGAAACAAATGGGCGACGATTTCTCGTCTTCTTCCAGGTAGAACAGATAACGCAATAAAAAATCACTGGAATTCAACTCTCCGCCGACGTCGCACGGCGGCTCTAGCAGCGGTTTCACCGGTTACAACGGTTCCACCGGTTGCAACGGTTGTTCAAAGGGTTCCAACGGCGGTGCCGGTGATTCCCACCGGTGTGATAACCGGAAAACGTGTGAATGAAAGTTACGACGGTGATTATTATAAGGATTTGTTGAGTCTCGGCACACGTTATAAACGTCCTTGTGTTATGGTTGAGAATAATAGCGGGTCACGTGGGTCACGTGACGGTGAAGAAACGGTAACGGAAGATGATGACGCAGGGAATAAAGGTGTTAACGTGGTTAGGACGTCGTTAAGTTTGTTTCCACCTGGTTTTCTGAAAGAAGAAGAAGAGAGAAAAGAAAAAGAAAAAGAAAAAGAAATTGAAGATTTTGAAGATAGTAATGATGATTTGAAGTTACTGAAAAATGAGAAATTGAGGTCGGTTCTTCAGCGCATGATAGCAGAGGAAGTTAGGAATTATGTTGATAACATGCGCCTTGGTGGTGGGTTTGCTCCTGATTCAACACTTCGAAAGTGA
Protein sequence

>MS.gene46217.t1

MISANSNSNSNSNGGGDENGDKVKGSWSKNEDETLVKLVKENGARNWSVISNGIPGRSGKSCRLRWCNQLSPTVQHLPFTPAEDNIIIEAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRRRTAALAAVSPVTTVPPVATVVQRVPTAVPVIPTGVITGKRVNESYDGDYYKDLLSLGTRYKRPCVMVENNSGSRGSRDGEETVTEDDDAGNKGVNVVRTSLSLFPPGFLKEEEERKEKEKEKEIEDFEDSNDDLKLLKNEKLRSVLQRMIAEEVRNYVDNMRLGGGFAPDSTLRK