Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46221.t1 | XP_003610523.2 | 65.4 | 399 | 62 | 5 | 1 | 323 | 168 | 566 | 3.70E-127 | 465.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46221.t1 | Q9SU29 | 32.1 | 371 | 177 | 12 | 22 | 323 | 194 | 558 | 3.2e-34 | 147.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46221.t1 | G7JKJ3 | 65.4 | 399 | 62 | 5 | 1 | 323 | 168 | 566 | 2.7e-127 | 465.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46221.t1 | MTR_4g133120 | 86.207 | 203 | 27 | 1 | 1 | 202 | 168 | 370 | 3.23e-111 | 351 |
| MS.gene46221.t1 | MTR_4g133120 | 73.394 | 109 | 16 | 1 | 228 | 323 | 458 | 566 | 5.22e-42 | 161 |
| MS.gene46221.t1 | MTR_3g110405 | 82.857 | 70 | 12 | 0 | 433 | 502 | 139 | 208 | 1.84e-33 | 129 |
| MS.gene46221.t1 | MTR_2g025810 | 25.180 | 556 | 279 | 21 | 58 | 511 | 171 | 691 | 4.06e-27 | 116 |
| MS.gene46221.t1 | MTR_2g025830 | 29.412 | 374 | 166 | 13 | 44 | 333 | 157 | 516 | 7.01e-25 | 109 |
| MS.gene46221.t1 | MTR_8g035890 | 58.904 | 73 | 30 | 0 | 433 | 505 | 118 | 190 | 3.10e-22 | 97.1 |
| MS.gene46221.t1 | MTR_8g040300 | 57.534 | 73 | 31 | 0 | 433 | 505 | 112 | 184 | 1.72e-21 | 94.7 |
| MS.gene46221.t1 | MTR_2g025950 | 27.020 | 396 | 171 | 13 | 44 | 338 | 118 | 496 | 1.66e-19 | 92.8 |
| MS.gene46221.t1 | MTR_2g025790 | 27.446 | 368 | 176 | 12 | 46 | 333 | 166 | 522 | 1.80e-19 | 92.8 |
| MS.gene46221.t1 | MTR_0464s0040 | 46.970 | 66 | 31 | 1 | 434 | 495 | 114 | 179 | 6.18e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46221.t1 | AT2G25880 | 82.857 | 70 | 12 | 0 | 433 | 502 | 127 | 196 | 1.18e-33 | 129 |
| MS.gene46221.t1 | AT4G32830 | 68.966 | 87 | 27 | 0 | 416 | 502 | 116 | 202 | 1.77e-33 | 129 |
| MS.gene46221.t1 | AT2G25880 | 82.857 | 70 | 12 | 0 | 433 | 502 | 140 | 209 | 1.95e-33 | 129 |
| MS.gene46221.t1 | AT2G25880 | 82.857 | 70 | 12 | 0 | 433 | 502 | 188 | 257 | 7.96e-33 | 129 |
| MS.gene46221.t1 | AT4G12570 | 51.852 | 108 | 39 | 2 | 229 | 323 | 451 | 558 | 8.79e-27 | 115 |
| MS.gene46221.t1 | AT2G45490 | 59.459 | 74 | 30 | 0 | 432 | 505 | 123 | 196 | 3.34e-23 | 99.4 |
| MS.gene46221.t1 | AT2G45490 | 59.459 | 74 | 30 | 0 | 432 | 505 | 123 | 196 | 7.42e-23 | 99.0 |
| MS.gene46221.t1 | AT2G25880 | 70.000 | 40 | 12 | 0 | 463 | 502 | 125 | 164 | 1.07e-11 | 65.9 |
Find 121 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTATTGCTGGACTGTTTA+TGG | 0.071769 | 5.3:+67143355 | MS.gene46221:CDS |
| TACATACATGTTAAAGATTT+TGG | 0.132587 | 5.3:+67146660 | MS.gene46221:CDS |
| CTCAATCTTAGGACTGTTTC+AGG | 0.184611 | 5.3:+67145803 | MS.gene46221:intron |
| CTTGCTCACTAATATTAATT+TGG | 0.185518 | 5.3:+67142369 | MS.gene46221:CDS |
| GCTTTCCATGGCAGTATATA+AGG | 0.207343 | 5.3:-67146251 | None:intergenic |
| CATGAATTCTTCCGCCATTT+TGG | 0.215608 | 5.3:+67142450 | MS.gene46221:CDS |
| TTGAAGGGACTGACTTTAAT+TGG | 0.224670 | 5.3:+67145683 | MS.gene46221:CDS |
| AAACCAGAGAACCTTCTTAT+TGG | 0.231506 | 5.3:+67146294 | MS.gene46221:CDS |
| TTTGAGATAAAGGGCTTATT+AGG | 0.254512 | 5.3:+67145393 | MS.gene46221:intron |
| CAAAGGGTTGGTGTTGGTTC+AGG | 0.273096 | 5.3:+67142732 | MS.gene46221:CDS |
| CACGCCTTATTTCCTGTATA+AGG | 0.286887 | 5.3:-67142496 | None:intergenic |
| AAGCTCTTAACAGATTTAAC+AGG | 0.292225 | 5.3:-67142349 | None:intergenic |
| TTTGCCTTATACAGGAAATA+AGG | 0.296312 | 5.3:+67142492 | MS.gene46221:CDS |
| GCAGAATCAGCATCGAGTTT+AGG | 0.297402 | 5.3:-67142406 | None:intergenic |
| CACTAATATTAATTTGGCTT+TGG | 0.315056 | 5.3:+67142375 | MS.gene46221:CDS |
| TGATAGTTTGTTGAGGCATT+TGG | 0.361820 | 5.3:+67142783 | MS.gene46221:CDS |
| ATGCCTCCTAGCCTCGAAAT+TGG | 0.368494 | 5.3:-67143249 | None:intergenic |
| CTCGTAGTCTTCTTTCACCT+CGG | 0.371502 | 5.3:-67143291 | None:intergenic |
| TGTAAATTGTTTAGTAGAGT+TGG | 0.376215 | 5.3:+67142613 | MS.gene46221:CDS |
| CAGCGTAACAAGAACCAAAA+TGG | 0.383463 | 5.3:-67142464 | None:intergenic |
| GTAAATTGTTTAGTAGAGTT+GGG | 0.397413 | 5.3:+67142614 | MS.gene46221:CDS |
| CACTGGAATCGAGCAGCAAC+AGG | 0.397794 | 5.3:+67142904 | MS.gene46221:CDS |
| TCAGCATCGAGTTTAGGTTT+AGG | 0.403276 | 5.3:-67142400 | None:intergenic |
| AGTAGTGTATGTTTCATCAT+TGG | 0.403466 | 5.3:+67146221 | MS.gene46221:CDS |
| CAGTCCAGCAATAGTGATTC+GGG | 0.405227 | 5.3:-67143348 | None:intergenic |
| AAGCATGCTGATGGGGCTGC+TGG | 0.411338 | 5.3:+67145013 | MS.gene46221:CDS |
| TCTAGTTCTTGTCCTGCTGC+TGG | 0.412276 | 5.3:-67142952 | None:intergenic |
| ACAGTCCAGCAATAGTGATT+CGG | 0.412439 | 5.3:-67143349 | None:intergenic |
| CTCACAGACATAAGACTTCA+AGG | 0.417865 | 5.3:-67146701 | None:intergenic |
| AAACTTAAGCTAGCGGACTT+TGG | 0.426034 | 5.3:+67146423 | MS.gene46221:CDS |
| TCGTAGTCTTCTTTCACCTC+GGG | 0.426179 | 5.3:-67143290 | None:intergenic |
| AGGTGATGGTGCTGCATCAT+TGG | 0.426380 | 5.3:+67145823 | MS.gene46221:CDS |
| GCTGATGGGGCTGCTGGAAG+TGG | 0.440363 | 5.3:+67145019 | MS.gene46221:CDS |
| ACTGTTTATGATCTTTGTCA+TGG | 0.449359 | 5.3:+67142310 | MS.gene46221:CDS |
| TGTAGGATAATGTGGTTTGA+AGG | 0.462219 | 5.3:+67145667 | MS.gene46221:intron |
| TGCATGAGATGCTCATTGGC+AGG | 0.462229 | 5.3:+67143318 | MS.gene46221:CDS |
| TGTTCCCGAATCACTATTGC+TGG | 0.464169 | 5.3:+67143344 | MS.gene46221:CDS |
| CGTGTTCTGATACTTGTATC+AGG | 0.474469 | 5.3:+67142515 | MS.gene46221:CDS |
| CTTAGGACTGTTTCAGGTGA+TGG | 0.478739 | 5.3:+67145809 | MS.gene46221:intron |
| GCACCAATAAGAAGGTTCTC+TGG | 0.479972 | 5.3:-67146297 | None:intergenic |
| CTTTCCATGGCAGTATATAA+GGG | 0.483707 | 5.3:-67146250 | None:intergenic |
| GGACTGGAATCGAGCAGCAC+TGG | 0.498586 | 5.3:+67142887 | MS.gene46221:CDS |
| CTTTGTTATGTAGGATAATG+TGG | 0.501662 | 5.3:+67145659 | MS.gene46221:intron |
| CAGCAGGACAAGAACTAGAA+TGG | 0.509828 | 5.3:+67142956 | MS.gene46221:CDS |
| CATCATTGGATTCATTGTTG+TGG | 0.512288 | 5.3:+67145837 | MS.gene46221:CDS |
| AATGAGGAAGCCACTGGCCC+CGG | 0.512967 | 5.3:+67143386 | MS.gene46221:CDS |
| CTCTTTGAAACGAAAACAGC+AGG | 0.513608 | 5.3:-67144729 | None:intergenic |
| TTAAGCTAGCGGACTTTGGA+TGG | 0.524617 | 5.3:+67146427 | MS.gene46221:CDS |
| TTCAAAGAGGACATTTCCTA+CGG | 0.527368 | 5.3:+67144743 | MS.gene46221:CDS |
| ATGCGGTGAAGCATGCTGAT+GGG | 0.528350 | 5.3:+67145005 | MS.gene46221:CDS |
| TCAGCAAGTTCATGAACAAA+CGG | 0.529690 | 5.3:-67142763 | None:intergenic |
| GTAGGATAATGTGGTTTGAA+GGG | 0.532173 | 5.3:+67145668 | MS.gene46221:intron |
| CAAGAATGTCACCAATTTCG+AGG | 0.533187 | 5.3:+67143238 | MS.gene46221:CDS |
| ACAAAGGACAAGCAAGGGAA+GGG | 0.536140 | 5.3:-67142822 | None:intergenic |
| GATGCGGTGAAGCATGCTGA+TGG | 0.536359 | 5.3:+67145004 | MS.gene46221:CDS |
| CATGAGATGCTCATTGGCAG+GGG | 0.538530 | 5.3:+67143320 | MS.gene46221:CDS |
| CCTGTGTGCTGCACATGGTC+CGG | 0.538815 | 5.3:-67146473 | None:intergenic |
| ATGTCACCAATTTCGAGGCT+AGG | 0.540367 | 5.3:+67143243 | MS.gene46221:CDS |
| TCCACTGCAAGAAAATCCTC+AGG | 0.540532 | 5.3:+67144771 | MS.gene46221:CDS |
| GGATTACCTTCCACCTGGGA+TGG | 0.541323 | 5.3:+67146494 | MS.gene46221:CDS |
| AGAGGGCCGACGAGCATCAG+TGG | 0.544418 | 5.3:+67143204 | MS.gene46221:CDS |
| CCTCAGCACACCGGGGCCAG+TGG | 0.547426 | 5.3:-67143396 | None:intergenic |
| TGAAGTTCAAGCAACGGTTG+AGG | 0.549122 | 5.3:+67145462 | MS.gene46221:CDS |
| ATCGAAGACGTTTCATACGC+AGG | 0.550772 | 5.3:+67142567 | MS.gene46221:CDS |
| GCAGGCTGCACATGTGGCGT+TGG | 0.552099 | 5.3:+67142585 | MS.gene46221:CDS |
| AAGTTGCATGAGATGCTCAT+TGG | 0.556057 | 5.3:+67143314 | MS.gene46221:CDS |
| TCACTTGTGCACCAATAAGA+AGG | 0.556527 | 5.3:-67146305 | None:intergenic |
| AATTTCACTTGCGGCGTCTG+AGG | 0.557109 | 5.3:+67142699 | MS.gene46221:CDS |
| GCATGAGATGCTCATTGGCA+GGG | 0.560481 | 5.3:+67143319 | MS.gene46221:CDS |
| TGCATACATTCAATCGCAGC+CGG | 0.563890 | 5.3:+67146454 | MS.gene46221:CDS |
| AGTTCTTGTCCTGCTGCTGG+TGG | 0.564574 | 5.3:-67142949 | None:intergenic |
| TGTTGCTTACCACCAGCAGC+AGG | 0.565851 | 5.3:+67142940 | MS.gene46221:CDS |
| TCCTTTGTTGAACAATGTTG+AGG | 0.566218 | 5.3:+67142837 | MS.gene46221:CDS |
| GAATCACAAAGGGTTGGTGT+TGG | 0.569578 | 5.3:+67142726 | MS.gene46221:CDS |
| CAAAGGACAAGCAAGGGAAG+GGG | 0.572807 | 5.3:-67142821 | None:intergenic |
| TAAAGGGCTTATTAGGTGCA+AGG | 0.574732 | 5.3:+67145400 | MS.gene46221:intron |
| AACAAAGGACAAGCAAGGGA+AGG | 0.575612 | 5.3:-67142823 | None:intergenic |
| GGACAAGAACTAGAATGGAT+TGG | 0.580566 | 5.3:+67142961 | MS.gene46221:CDS |
| TGCGGTGAAGCATGCTGATG+GGG | 0.582053 | 5.3:+67145006 | MS.gene46221:CDS |
| ACACAGGATTACCTTCCACC+TGG | 0.582633 | 5.3:+67146489 | MS.gene46221:CDS |
| TCATACGCAGGCTGCACATG+TGG | 0.584491 | 5.3:+67142579 | MS.gene46221:CDS |
| TGTGTATGACATGCTTTCCA+TGG | 0.585656 | 5.3:-67146263 | None:intergenic |
| CATCGTTAAATATGCAAAGA+GGG | 0.587269 | 5.3:+67143187 | MS.gene46221:CDS |
| GATTACCTTCCACCTGGGAT+GGG | 0.593669 | 5.3:+67146495 | MS.gene46221:CDS |
| CTGAGGATGAGAATCACAAA+GGG | 0.593777 | 5.3:+67142716 | MS.gene46221:CDS |
| TAATATTGAAGTTCAAGCAA+CGG | 0.596137 | 5.3:+67145456 | MS.gene46221:CDS |
| AGTGGCAAGATATACTATGA+AGG | 0.597910 | 5.3:+67145037 | MS.gene46221:CDS |
| GAGGCATTTGGATTTGAGCA+TGG | 0.601636 | 5.3:+67142795 | MS.gene46221:CDS |
| TTTATCCGCAGGATTACTTG+CGG | 0.602338 | 5.3:+67144701 | MS.gene46221:intron |
| TCCTCAACATTGTTCAACAA+AGG | 0.608235 | 5.3:-67142838 | None:intergenic |
| CGTGCCCTTATATACTGCCA+TGG | 0.608317 | 5.3:+67146246 | MS.gene46221:CDS |
| CGTAGTCTTCTTTCACCTCG+GGG | 0.608873 | 5.3:-67143289 | None:intergenic |
| TTGAAAGGAAGGTTTGGATG+CGG | 0.610256 | 5.3:+67144988 | MS.gene46221:intron |
| GGATGAGAATCACAAAGGGT+TGG | 0.611943 | 5.3:+67142720 | MS.gene46221:CDS |
| GAGCAGCAACAGGCTCTCCA+TGG | 0.612896 | 5.3:+67142914 | MS.gene46221:CDS |
| TGTTCAACAAAGGACAAGCA+AGG | 0.613485 | 5.3:-67142828 | None:intergenic |
| TCATCGTTAAATATGCAAAG+AGG | 0.615436 | 5.3:+67143186 | MS.gene46221:CDS |
| AAAGGGCTTATTAGGTGCAA+GGG | 0.615943 | 5.3:+67145401 | MS.gene46221:intron |
| CCGGACCATGTGCAGCACAC+AGG | 0.619760 | 5.3:+67146473 | MS.gene46221:CDS |
| CTTGCAGTGGAAGAATCCGT+AGG | 0.620207 | 5.3:-67144759 | None:intergenic |
| TGCTCGATTCCAGTCCACAC+AGG | 0.621157 | 5.3:-67142880 | None:intergenic |
| GCTCGATTCCAGTCCACACA+GGG | 0.625034 | 5.3:-67142879 | None:intergenic |
| ACATACCCATCCCAGGTGGA+AGG | 0.625505 | 5.3:-67146500 | None:intergenic |
| TCACCAATTTCGAGGCTAGG+AGG | 0.626394 | 5.3:+67143246 | MS.gene46221:CDS |
| ATGGAAAGCATGTCATACAC+AGG | 0.627089 | 5.3:+67146265 | MS.gene46221:CDS |
| GTAATCCTGTGTGCTGCACA+TGG | 0.630634 | 5.3:-67146478 | None:intergenic |
| CAACTGAACATACCCATCCC+AGG | 0.631602 | 5.3:-67146507 | None:intergenic |
| CACCTCGGGGAATATCATCA+CGG | 0.633878 | 5.3:-67143276 | None:intergenic |
| AGCTGCTGAAATTTCACTTG+CGG | 0.640450 | 5.3:+67142690 | MS.gene46221:CDS |
| GGTGGTAAGCAACACAACCA+TGG | 0.646669 | 5.3:-67142931 | None:intergenic |
| AGCTCTTAACAGATTTAACA+GGG | 0.648270 | 5.3:-67142348 | None:intergenic |
| CACAGGATTACCTTCCACCT+GGG | 0.648638 | 5.3:+67146490 | MS.gene46221:CDS |
| AACTTGCTGATAGTTTGTTG+AGG | 0.656807 | 5.3:+67142776 | MS.gene46221:CDS |
| TCAGGGTAAACTTAAGCTAG+CGG | 0.660725 | 5.3:+67146416 | MS.gene46221:intron |
| GTTCAACAAAGGACAAGCAA+GGG | 0.662680 | 5.3:-67142827 | None:intergenic |
| TCTGAGGATGAGAATCACAA+AGG | 0.671305 | 5.3:+67142715 | MS.gene46221:CDS |
| AAGAATCCACTGATGCTCGT+CGG | 0.702162 | 5.3:-67143210 | None:intergenic |
| TGGAAAGCATGTCATACACA+GGG | 0.705400 | 5.3:+67146266 | MS.gene46221:CDS |
| CGTAACAAGAACCAAAATGG+CGG | 0.708264 | 5.3:-67142461 | None:intergenic |
| AGCCGTGATGATATTCCCCG+AGG | 0.709855 | 5.3:+67143274 | MS.gene46221:CDS |
| CTGAACATACCCATCCCAGG+TGG | 0.731337 | 5.3:-67146504 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTACATCGATTTTTATT+AGG | + | chr5.3:67143552-67143571 | MS.gene46221:intron | 15.0% |
| !!! | TTTTTCATACTTTTTATGTT+AGG | + | chr5.3:67146537-67146556 | MS.gene46221:intron | 15.0% |
| !!! | TTTTTTGTCTTAGTATTTTT+GGG | + | chr5.3:67142656-67142675 | MS.gene46221:CDS | 15.0% |
| !! | AAAGTTAAACAAACAAAAAC+AGG | - | chr5.3:67144927-67144946 | None:intergenic | 20.0% |
| !! | AAATTGAAAATAACAACCAA+AGG | - | chr5.3:67146366-67146385 | None:intergenic | 20.0% |
| !! | AAGTTAAACAAACAAAAACA+GGG | - | chr5.3:67144926-67144945 | None:intergenic | 20.0% |
| !! | AATCAATATAATGTCATTGA+AGG | - | chr5.3:67145170-67145189 | None:intergenic | 20.0% |
| !! | ACGAAATCAAAACAAATTAA+TGG | - | chr5.3:67145296-67145315 | None:intergenic | 20.0% |
| !! | CTTTGCATTATTTATTAGAT+CGG | - | chr5.3:67144411-67144430 | None:intergenic | 20.0% |
| !! | TTTAATATGAAATGATTGTG+TGG | + | chr5.3:67145212-67145231 | MS.gene46221:intron | 20.0% |
| !! | TTTGCATTATTTATTAGATC+GGG | - | chr5.3:67144410-67144429 | None:intergenic | 20.0% |
| !!! | AAAAAGTAAGTTCAGAATTT+TGG | - | chr5.3:67143500-67143519 | None:intergenic | 20.0% |
| !!! | CTTTTTTGTCTTAGTATTTT+TGG | + | chr5.3:67142655-67142674 | MS.gene46221:CDS | 20.0% |
| !!! | TACATACATGTTAAAGATTT+TGG | + | chr5.3:67146660-67146679 | MS.gene46221:CDS | 20.0% |
| !!! | TGTCATATGTTTTTGTTTTT+AGG | + | chr5.3:67146159-67146178 | MS.gene46221:intron | 20.0% |
| !!! | TTTTTGTCTTAGTATTTTTG+GGG | + | chr5.3:67142657-67142676 | MS.gene46221:CDS | 20.0% |
| ! | AAACAAAAAATAGCACCTAT+TGG | - | chr5.3:67145133-67145152 | None:intergenic | 25.0% |
| ! | AAACTTTCATACAAGTATAG+AGG | - | chr5.3:67143949-67143968 | None:intergenic | 25.0% |
| ! | AAATCTTGTATGGTTATTCT+TGG | - | chr5.3:67144252-67144271 | None:intergenic | 25.0% |
| ! | AACAACTGGTTAAAAAGTAA+AGG | + | chr5.3:67144543-67144562 | MS.gene46221:intron | 25.0% |
| ! | AACTTCAAAATCATGTTTAG+TGG | - | chr5.3:67144151-67144170 | None:intergenic | 25.0% |
| ! | AATCAAGAACATTTCATCAA+AGG | - | chr5.3:67144211-67144230 | None:intergenic | 25.0% |
| ! | AGTGTTAAGATTATATTCCA+TGG | + | chr5.3:67144476-67144495 | MS.gene46221:intron | 25.0% |
| ! | ATTAAACAAATAGACGACTA+CGG | - | chr5.3:67145198-67145217 | None:intergenic | 25.0% |
| ! | ATTATGGATTTCTCAATCTT+AGG | + | chr5.3:67145792-67145811 | MS.gene46221:intron | 25.0% |
| ! | ATTGCCTAAAAACAAACAAA+AGG | - | chr5.3:67146199-67146218 | None:intergenic | 25.0% |
| ! | CTAAGACAAAAAAGATACAA+AGG | - | chr5.3:67142649-67142668 | None:intergenic | 25.0% |
| ! | CTAATAAATAATGCAAAGAG+AGG | + | chr5.3:67144413-67144432 | MS.gene46221:intron | 25.0% |
| ! | CTTGCTCACTAATATTAATT+TGG | + | chr5.3:67142369-67142388 | MS.gene46221:CDS | 25.0% |
| ! | GAAAATCTTCTTCATTATCA+GGG | + | chr5.3:67146399-67146418 | MS.gene46221:intron | 25.0% |
| ! | GTAAATTGTTTAGTAGAGTT+GGG | + | chr5.3:67142614-67142633 | MS.gene46221:CDS | 25.0% |
| ! | GTTTATGGAATTCAAAAATG+AGG | + | chr5.3:67143370-67143389 | MS.gene46221:CDS | 25.0% |
| ! | TAATATTGAAGTTCAAGCAA+CGG | + | chr5.3:67145456-67145475 | MS.gene46221:CDS | 25.0% |
| ! | TCATTATATTCAAAGCCAAT+AGG | + | chr5.3:67145115-67145134 | MS.gene46221:intron | 25.0% |
| ! | TCTAGTAGTTGTTAATGTTT+GGG | - | chr5.3:67144646-67144665 | None:intergenic | 25.0% |
| ! | TGAAAATCTTCTTCATTATC+AGG | + | chr5.3:67146398-67146417 | MS.gene46221:intron | 25.0% |
| ! | TGAAATAAAGAGCTAAAACA+AGG | + | chr5.3:67143680-67143699 | MS.gene46221:intron | 25.0% |
| ! | TGGATAAACATAACAGAATT+GGG | - | chr5.3:67143480-67143499 | None:intergenic | 25.0% |
| ! | TGTAAATTGTTTAGTAGAGT+TGG | + | chr5.3:67142613-67142632 | MS.gene46221:CDS | 25.0% |
| ! | TTAAACTTCCAGTAACATAT+AGG | + | chr5.3:67144588-67144607 | MS.gene46221:intron | 25.0% |
| ! | TTCTAGTAGTTGTTAATGTT+TGG | - | chr5.3:67144647-67144666 | None:intergenic | 25.0% |
| ! | TTGCCTAAAAACAAACAAAA+GGG | - | chr5.3:67146198-67146217 | None:intergenic | 25.0% |
| ! | TTGGATAAACATAACAGAAT+TGG | - | chr5.3:67143481-67143500 | None:intergenic | 25.0% |
| ! | TTTAGTACTTTAGTGAAAAC+CGG | + | chr5.3:67143773-67143792 | MS.gene46221:intron | 25.0% |
| !! | AAGATTTCTAAGCTTTATGA+TGG | + | chr5.3:67143107-67143126 | MS.gene46221:intron | 25.0% |
| !! | AAGTTTGTATTTTTCTGCAT+TGG | + | chr5.3:67143963-67143982 | MS.gene46221:intron | 25.0% |
| !! | CACTAATATTAATTTGGCTT+TGG | + | chr5.3:67142375-67142394 | MS.gene46221:CDS | 25.0% |
| !! | GAATCTAAAGTGAAATTCTT+AGG | - | chr5.3:67145562-67145581 | None:intergenic | 25.0% |
| !! | TGTTTCTTTTATGATTCCTT+TGG | + | chr5.3:67146347-67146366 | MS.gene46221:intron | 25.0% |
| !! | TTATCTGATTCAACCATTTT+TGG | + | chr5.3:67144004-67144023 | MS.gene46221:intron | 25.0% |
| !!! | ACGTAATGTGAGTTTTAAAT+AGG | - | chr5.3:67144101-67144120 | None:intergenic | 25.0% |
| !!! | AGAAATCTTGTTTGATCTTT+TGG | - | chr5.3:67143456-67143475 | None:intergenic | 25.0% |
| !!! | AGGTGCTATTTTTTGTTTTT+AGG | + | chr5.3:67145135-67145154 | MS.gene46221:intron | 25.0% |
| !!! | AGTATAGAGGTTTTATATCA+TGG | - | chr5.3:67143936-67143955 | None:intergenic | 25.0% |
| !!! | ATAAGCTGATTTGAGATAAA+GGG | + | chr5.3:67145384-67145403 | MS.gene46221:intron | 25.0% |
| !!! | CATTGGTTTTGAATTTAATG+AGG | + | chr5.3:67143980-67143999 | MS.gene46221:intron | 25.0% |
| !!! | GAAATCTTGTTTGATCTTTT+GGG | - | chr5.3:67143455-67143474 | None:intergenic | 25.0% |
| !!! | GGCTTTGAATATAATGATAT+AGG | - | chr5.3:67145112-67145131 | None:intergenic | 25.0% |
| !!! | TAGTATTTTTGGGGTTTATT+TGG | + | chr5.3:67142666-67142685 | MS.gene46221:CDS | 25.0% |
| !!! | TATCTGATTCAACCATTTTT+GGG | + | chr5.3:67144005-67144024 | MS.gene46221:intron | 25.0% |
| !!! | TCTGTTATATGTGGTTTTAT+TGG | - | chr5.3:67144311-67144330 | None:intergenic | 25.0% |
| !!! | TGCTAAGTGAATTTTAGTTT+TGG | + | chr5.3:67144870-67144889 | MS.gene46221:intron | 25.0% |
| !!! | TTGTTTTGATACTAGTTTCT+TGG | + | chr5.3:67145317-67145336 | MS.gene46221:intron | 25.0% |
| !!! | TTTGAAGTTGTTGTTTTTAG+TGG | + | chr5.3:67144162-67144181 | MS.gene46221:intron | 25.0% |
| AAACAATAGTCTAAGTATGC+AGG | - | chr5.3:67146332-67146351 | None:intergenic | 30.0% | |
| AAGATTTCAACACAATCCAT+TGG | + | chr5.3:67144265-67144284 | MS.gene46221:intron | 30.0% | |
| AAGCTCTTAACAGATTTAAC+AGG | - | chr5.3:67142352-67142371 | None:intergenic | 30.0% | |
| AATACGTGAATCAGACATAT+GGG | - | chr5.3:67144043-67144062 | None:intergenic | 30.0% | |
| AATCCATAATGAAAACACAG+TGG | - | chr5.3:67145782-67145801 | None:intergenic | 30.0% | |
| ACTGTTTATGATCTTTGTCA+TGG | + | chr5.3:67142310-67142329 | MS.gene46221:CDS | 30.0% | |
| AGATTTCAACACAATCCATT+GGG | + | chr5.3:67144266-67144285 | MS.gene46221:intron | 30.0% | |
| AGCTCTTAACAGATTTAACA+GGG | - | chr5.3:67142351-67142370 | None:intergenic | 30.0% | |
| AGTAGTGTATGTTTCATCAT+TGG | + | chr5.3:67146221-67146240 | MS.gene46221:CDS | 30.0% | |
| CATCGTTAAATATGCAAAGA+GGG | + | chr5.3:67143187-67143206 | MS.gene46221:CDS | 30.0% | |
| CGAGGAAAAAAATCCATATA+AGG | - | chr5.3:67146601-67146620 | None:intergenic | 30.0% | |
| CTAAGCATTTCTTTATGCAA+AGG | - | chr5.3:67143618-67143637 | None:intergenic | 30.0% | |
| GATTGTGTTGAAATCTTGTA+TGG | - | chr5.3:67144262-67144281 | None:intergenic | 30.0% | |
| GGATAAACATAACAGAATTG+GGG | - | chr5.3:67143479-67143498 | None:intergenic | 30.0% | |
| TAAACAAACAAAAACAGGGA+AGG | - | chr5.3:67144922-67144941 | None:intergenic | 30.0% | |
| TAACTCTACCTATATGTTAC+TGG | - | chr5.3:67144599-67144618 | None:intergenic | 30.0% | |
| TACAAAACTCTGTCATTGAA+AGG | + | chr5.3:67144973-67144992 | MS.gene46221:intron | 30.0% | |
| TATGCAAGAATATCACACTA+AGG | + | chr5.3:67145706-67145725 | MS.gene46221:intron | 30.0% | |
| TCACGTATTCATTTATCACA+CGG | + | chr5.3:67144054-67144073 | MS.gene46221:intron | 30.0% | |
| TCATCGTTAAATATGCAAAG+AGG | + | chr5.3:67143186-67143205 | MS.gene46221:CDS | 30.0% | |
| TTAAGAGATTCCTTGCATTA+AGG | + | chr5.3:67145605-67145624 | MS.gene46221:intron | 30.0% | |
| TTAGTACTTTAGTGAAAACC+GGG | + | chr5.3:67143774-67143793 | MS.gene46221:intron | 30.0% | |
| TTATCACACGGAAATACAAT+AGG | + | chr5.3:67144066-67144085 | MS.gene46221:intron | 30.0% | |
| TTGTGCTTTAGTGTTTACTA+TGG | + | chr5.3:67145978-67145997 | MS.gene46221:intron | 30.0% | |
| TTGTGTGGAATTTGTATACT+TGG | + | chr5.3:67145227-67145246 | MS.gene46221:intron | 30.0% | |
| TTTGCCTTATACAGGAAATA+AGG | + | chr5.3:67142492-67142511 | MS.gene46221:CDS | 30.0% | |
| ! | AATTTTAGACAACAGCTGAT+CGG | - | chr5.3:67143020-67143039 | None:intergenic | 30.0% |
| ! | AGATTCAAAACATGAGTTGA+AGG | + | chr5.3:67145632-67145651 | MS.gene46221:intron | 30.0% |
| ! | AGTTTAACACCTTTTATGCT+AGG | - | chr5.3:67144575-67144594 | None:intergenic | 30.0% |
| ! | ATGTGTACCTTACATTTTGA+AGG | + | chr5.3:67145360-67145379 | MS.gene46221:intron | 30.0% |
| ! | ATGTTGAACAAGTACTTTTG+AGG | + | chr5.3:67143585-67143604 | MS.gene46221:intron | 30.0% |
| ! | CTTTGTTATGTAGGATAATG+TGG | + | chr5.3:67145659-67145678 | MS.gene46221:intron | 30.0% |
| ! | TCTCTCACTATTGTTTCTTA+GGG | - | chr5.3:67143651-67143670 | None:intergenic | 30.0% |
| ! | TTCTCTCACTATTGTTTCTT+AGG | - | chr5.3:67143652-67143671 | None:intergenic | 30.0% |
| ! | TTTGAGATAAAGGGCTTATT+AGG | + | chr5.3:67145393-67145412 | MS.gene46221:intron | 30.0% |
| ! | TTTGTTTAACTTTCCGATTG+TGG | + | chr5.3:67144934-67144953 | MS.gene46221:intron | 30.0% |
| !! | ATCTGATTCAACCATTTTTG+GGG | + | chr5.3:67144006-67144025 | MS.gene46221:intron | 30.0% |
| !! | CAACCCTTTTGTTTGTTTTT+AGG | + | chr5.3:67146192-67146211 | MS.gene46221:intron | 30.0% |
| !! | CAACTCATGTTTTGAATCTA+AGG | - | chr5.3:67145631-67145650 | None:intergenic | 30.0% |
| !! | CATAAGCTGATTTGAGATAA+AGG | + | chr5.3:67145383-67145402 | MS.gene46221:intron | 30.0% |
| !! | GCTTTCAAGTTTGTGTTTAT+TGG | + | chr5.3:67145886-67145905 | MS.gene46221:intron | 30.0% |
| !! | TTTCTAAGGTTAATGAAGTG+AGG | - | chr5.3:67143706-67143725 | None:intergenic | 30.0% |
| !!! | AAGCTTTGTGGTTTTGATAA+TGG | + | chr5.3:67145947-67145966 | MS.gene46221:intron | 30.0% |
| !!! | AGTTGTTGTTTTTAGTGGAT+TGG | + | chr5.3:67144167-67144186 | MS.gene46221:intron | 30.0% |
| !!! | ATCTCTTGTCCATTTTTTGA+AGG | - | chr5.3:67143051-67143070 | None:intergenic | 30.0% |
| !!! | TGTATCAGGCATTTTTTGAA+TGG | + | chr5.3:67142529-67142548 | MS.gene46221:CDS | 30.0% |
| !!! | TTTTGGTTTCTTTTTGTTGC+CGG | + | chr5.3:67143429-67143448 | MS.gene46221:intron | 30.0% |
| AAACTCTGTCATTGAAAGGA+AGG | + | chr5.3:67144977-67144996 | MS.gene46221:intron | 35.0% | |
| AACATCTCATATGGCAAAGT+AGG | + | chr5.3:67143892-67143911 | MS.gene46221:intron | 35.0% | |
| ACAAAAACAGGGAAGGAATA+AGG | - | chr5.3:67144915-67144934 | None:intergenic | 35.0% | |
| AGCATATTGAACCTGAGATT+TGG | - | chr5.3:67145265-67145284 | None:intergenic | 35.0% | |
| AGGAAACTTCCTAGCATAAA+AGG | + | chr5.3:67144563-67144582 | MS.gene46221:intron | 35.0% | |
| AGTGGCAAGATATACTATGA+AGG | + | chr5.3:67145037-67145056 | MS.gene46221:CDS | 35.0% | |
| AGTTTGTACTTCGCCTTATA+TGG | + | chr5.3:67146585-67146604 | MS.gene46221:intron | 35.0% | |
| ATCGGGTTTCACAAGATTTA+TGG | - | chr5.3:67144393-67144412 | None:intergenic | 35.0% | |
| CAAATGTCACTCTGTATTTG+CGG | + | chr5.3:67144336-67144355 | MS.gene46221:intron | 35.0% | |
| CATCATTGGATTCATTGTTG+TGG | + | chr5.3:67145837-67145856 | MS.gene46221:CDS | 35.0% | |
| CTTCTATTATGCCAAATCTC+AGG | + | chr5.3:67145251-67145270 | MS.gene46221:intron | 35.0% | |
| CTTTCCATGGCAGTATATAA+GGG | - | chr5.3:67146253-67146272 | None:intergenic | 35.0% | |
| GAATACGTGAATCAGACATA+TGG | - | chr5.3:67144044-67144063 | None:intergenic | 35.0% | |
| GCTTATGCCTTCAAAATGTA+AGG | - | chr5.3:67145370-67145389 | None:intergenic | 35.0% | |
| GTAGGATAATGTGGTTTGAA+GGG | + | chr5.3:67145668-67145687 | MS.gene46221:intron | 35.0% | |
| TCAGCAAGTTCATGAACAAA+CGG | - | chr5.3:67142766-67142785 | None:intergenic | 35.0% | |
| TCCTCAACATTGTTCAACAA+AGG | - | chr5.3:67142841-67142860 | None:intergenic | 35.0% | |
| TCCTTTGTTGAACAATGTTG+AGG | + | chr5.3:67142837-67142856 | MS.gene46221:CDS | 35.0% | |
| TGAAAGGCAAACATCTCATA+TGG | + | chr5.3:67143883-67143902 | MS.gene46221:intron | 35.0% | |
| TGATACGTGCCTTCAAAAAA+TGG | + | chr5.3:67143039-67143058 | MS.gene46221:intron | 35.0% | |
| TGATAGACAAACAAACAACC+CGG | - | chr5.3:67143795-67143814 | None:intergenic | 35.0% | |
| TGCTAAGATCTTCTTAACCA+TGG | - | chr5.3:67144496-67144515 | None:intergenic | 35.0% | |
| TGGAGGACTATATCAATGAA+AGG | + | chr5.3:67143867-67143886 | MS.gene46221:intron | 35.0% | |
| TGTAGGATAATGTGGTTTGA+AGG | + | chr5.3:67145667-67145686 | MS.gene46221:intron | 35.0% | |
| TTCAAAGAGGACATTTCCTA+CGG | + | chr5.3:67144743-67144762 | MS.gene46221:CDS | 35.0% | |
| TTCATTGATATAGTCCTCCA+AGG | - | chr5.3:67143867-67143886 | None:intergenic | 35.0% | |
| TTTGATGCGTCTGTTATATG+TGG | - | chr5.3:67144320-67144339 | None:intergenic | 35.0% | |
| TTTGTTTGTGTTCTGTTCCA+TGG | + | chr5.3:67145582-67145601 | MS.gene46221:intron | 35.0% | |
| ! | CTCTCACTATTGTTTCTTAG+GGG | - | chr5.3:67143650-67143669 | None:intergenic | 35.0% |
| ! | CTGCAATGCTATATGTTTTC+AGG | + | chr5.3:67145072-67145091 | MS.gene46221:intron | 35.0% |
| ! | CTGTATGTTTTGCCTTATAC+AGG | + | chr5.3:67142484-67142503 | MS.gene46221:CDS | 35.0% |
| ! | TTGAAGGGACTGACTTTAAT+TGG | + | chr5.3:67145683-67145702 | MS.gene46221:CDS | 35.0% |
| !! | AACTTGCTGATAGTTTGTTG+AGG | + | chr5.3:67142776-67142795 | MS.gene46221:CDS | 35.0% |
| !! | AGAATCTATCGATTTACCTG+CGG | + | chr5.3:67144663-67144682 | MS.gene46221:intron | 35.0% |
| !! | CTTCAAGGTGTTCTTTTCTT+TGG | - | chr5.3:67146689-67146708 | None:intergenic | 35.0% |
| !! | GAGTTTTGTATGACCAGAAT+TGG | - | chr5.3:67144963-67144982 | None:intergenic | 35.0% |
| !! | TATCATGGAAGCATTTGTGA+TGG | - | chr5.3:67143921-67143940 | None:intergenic | 35.0% |
| !! | TGATAGTTTGTTGAGGCATT+TGG | + | chr5.3:67142783-67142802 | MS.gene46221:CDS | 35.0% |
| !!! | GCGATTTTTTTGAAGCTTTG+TGG | + | chr5.3:67145935-67145954 | MS.gene46221:intron | 35.0% |
| !!! | TATGTGGTTTTATTGGACAG+AGG | - | chr5.3:67144304-67144323 | None:intergenic | 35.0% |
| AAAATCCGCAAGTAATCCTG+CGG | - | chr5.3:67144709-67144728 | None:intergenic | 40.0% | |
| AAAGGGCTTATTAGGTGCAA+GGG | + | chr5.3:67145401-67145420 | MS.gene46221:intron | 40.0% | |
| AAGTTGCATGAGATGCTCAT+TGG | + | chr5.3:67143314-67143333 | MS.gene46221:CDS | 40.0% | |
| ACAGTCCAGCAATAGTGATT+CGG | - | chr5.3:67143352-67143371 | None:intergenic | 40.0% | |
| AGCTGCTGAAATTTCACTTG+CGG | + | chr5.3:67142690-67142709 | MS.gene46221:CDS | 40.0% | |
| CAAGAATGTCACCAATTTCG+AGG | + | chr5.3:67143238-67143257 | MS.gene46221:CDS | 40.0% | |
| CACTATTGCTGGACTGTTTA+TGG | + | chr5.3:67143355-67143374 | MS.gene46221:CDS | 40.0% | |
| CAGCGTAACAAGAACCAAAA+TGG | - | chr5.3:67142467-67142486 | None:intergenic | 40.0% | |
| CCAGAATTGGATTCCACAAT+CGG | - | chr5.3:67144950-67144969 | None:intergenic | 40.0% | |
| CCAGATCAGAAAAATGCATG+AGG | - | chr5.3:67143528-67143547 | None:intergenic | 40.0% | |
| CGTAACAAGAACCAAAATGG+CGG | - | chr5.3:67142464-67142483 | None:intergenic | 40.0% | |
| CGTGTTCTGATACTTGTATC+AGG | + | chr5.3:67142515-67142534 | MS.gene46221:CDS | 40.0% | |
| CTCAATCTTAGGACTGTTTC+AGG | + | chr5.3:67145803-67145822 | MS.gene46221:intron | 40.0% | |
| CTCCAAGGATGTCATCAAAT+TGG | - | chr5.3:67143852-67143871 | None:intergenic | 40.0% | |
| CTCTTCAGCTGCAATTTCTA+AGG | - | chr5.3:67143720-67143739 | None:intergenic | 40.0% | |
| CTGAGGATGAGAATCACAAA+GGG | + | chr5.3:67142716-67142735 | MS.gene46221:CDS | 40.0% | |
| CTGCACTTAACATTAACACC+TGG | - | chr5.3:67146639-67146658 | None:intergenic | 40.0% | |
| CTGTCATTGAAAGGAAGGTT+TGG | + | chr5.3:67144982-67145001 | MS.gene46221:intron | 40.0% | |
| GACAAGGAAATGGTGTTTGA+AGG | + | chr5.3:67143076-67143095 | MS.gene46221:intron | 40.0% | |
| GAGATTCACTGACAAGGAAA+TGG | + | chr5.3:67143066-67143085 | MS.gene46221:intron | 40.0% | |
| GCAAAAGTTAGAGTTACCTG+AGG | - | chr5.3:67144790-67144809 | None:intergenic | 40.0% | |
| GCTTTCCATGGCAGTATATA+AGG | - | chr5.3:67146254-67146273 | None:intergenic | 40.0% | |
| GGACAAGAACTAGAATGGAT+TGG | + | chr5.3:67142961-67142980 | MS.gene46221:CDS | 40.0% | |
| GGCGAAGTACAAACTATGAA+AGG | - | chr5.3:67146580-67146599 | None:intergenic | 40.0% | |
| GTTCAACAAAGGACAAGCAA+GGG | - | chr5.3:67142830-67142849 | None:intergenic | 40.0% | |
| TAAAGGGCTTATTAGGTGCA+AGG | + | chr5.3:67145400-67145419 | MS.gene46221:intron | 40.0% | |
| TCACTTGTGCACCAATAAGA+AGG | - | chr5.3:67146308-67146327 | None:intergenic | 40.0% | |
| TCAGGGTAAACTTAAGCTAG+CGG | + | chr5.3:67146416-67146435 | MS.gene46221:intron | 40.0% | |
| TCCTAAAACAGCCCCAAAAA+TGG | - | chr5.3:67144020-67144039 | None:intergenic | 40.0% | |
| TCGTGTTCATTGTTTGTTCC+AGG | + | chr5.3:67146618-67146637 | MS.gene46221:intron | 40.0% | |
| TCTGAGGATGAGAATCACAA+AGG | + | chr5.3:67142715-67142734 | MS.gene46221:CDS | 40.0% | |
| TGCAAGGAATCTCTTAACCA+TGG | - | chr5.3:67145602-67145621 | None:intergenic | 40.0% | |
| TGGAACAAACAATGAACACG+AGG | - | chr5.3:67146619-67146638 | None:intergenic | 40.0% | |
| TGTGTATGACATGCTTTCCA+TGG | - | chr5.3:67146266-67146285 | None:intergenic | 40.0% | |
| TGTTCAACAAAGGACAAGCA+AGG | - | chr5.3:67142831-67142850 | None:intergenic | 40.0% | |
| TTATGTTAGGTGTACTTCGC+AGG | + | chr5.3:67146550-67146569 | MS.gene46221:intron | 40.0% | |
| TTCAAAAATGAGGAAGCCAC+TGG | + | chr5.3:67143380-67143399 | MS.gene46221:CDS | 40.0% | |
| TTCACTTAGCATTGCTCAAG+AGG | - | chr5.3:67144861-67144880 | None:intergenic | 40.0% | |
| TTGAAAGGAAGGTTTGGATG+CGG | + | chr5.3:67144988-67145007 | MS.gene46221:intron | 40.0% | |
| TTTATCCGCAGGATTACTTG+CGG | + | chr5.3:67144701-67144720 | MS.gene46221:intron | 40.0% | |
| ! | ATGGAAAGCATGTCATACAC+AGG | + | chr5.3:67146265-67146284 | MS.gene46221:CDS | 40.0% |
| ! | ATTGGATTGCTTGTTGCTTG+AGG | + | chr5.3:67144185-67144204 | MS.gene46221:intron | 40.0% |
| ! | CAATTTGATGACATCCTTGG+AGG | + | chr5.3:67143850-67143869 | MS.gene46221:intron | 40.0% |
| ! | CATGAATTCTTCCGCCATTT+TGG | + | chr5.3:67142450-67142469 | MS.gene46221:CDS | 40.0% |
| ! | CCTCATGCATTTTTCTGATC+TGG | + | chr5.3:67143525-67143544 | MS.gene46221:intron | 40.0% |
| ! | CTCCAATTTGATGACATCCT+TGG | + | chr5.3:67143847-67143866 | MS.gene46221:intron | 40.0% |
| ! | GAAGGCTGTCTTTGTTATGT+AGG | + | chr5.3:67145650-67145669 | MS.gene46221:intron | 40.0% |
| ! | GAATCTAAGGCCTTAATGCA+AGG | - | chr5.3:67145618-67145637 | None:intergenic | 40.0% |
| ! | GGTAACTCTAACTTTTGCTG+AGG | + | chr5.3:67144792-67144811 | MS.gene46221:intron | 40.0% |
| ! | TCAGCATCGAGTTTAGGTTT+AGG | - | chr5.3:67142403-67142422 | None:intergenic | 40.0% |
| ! | TGGAAAGCATGTCATACACA+GGG | + | chr5.3:67146266-67146285 | MS.gene46221:CDS | 40.0% |
| !! | AAACTTAAGCTAGCGGACTT+TGG | + | chr5.3:67146423-67146442 | MS.gene46221:CDS | 40.0% |
| !! | CACGCCTTATTTCCTGTATA+AGG | - | chr5.3:67142499-67142518 | None:intergenic | 40.0% |
| !! | CTCTTTGAAACGAAAACAGC+AGG | - | chr5.3:67144732-67144751 | None:intergenic | 40.0% |
| !! | GTGCCACTGTGTTTTCATTA+TGG | + | chr5.3:67145776-67145795 | MS.gene46221:intron | 40.0% |
| !! | GTTTTGGTAACCTTTTCCTG+CGG | + | chr5.3:67144830-67144849 | MS.gene46221:intron | 40.0% |
| !! | TCTTGTTTGATCTTTTGGGC+CGG | - | chr5.3:67143451-67143470 | None:intergenic | 40.0% |
| !!! | AAGCTTTTTTAGTCCCTGTG+TGG | + | chr5.3:67142866-67142885 | MS.gene46221:CDS | 40.0% |
| !!! | ACCATTTTTGGGGCTGTTTT+AGG | + | chr5.3:67144016-67144035 | MS.gene46221:intron | 40.0% |
| !!! | CTGCTGTTTTCGTTTCAAAG+AGG | + | chr5.3:67144730-67144749 | MS.gene46221:CDS | 40.0% |
| AACAAAGGACAAGCAAGGGA+AGG | - | chr5.3:67142826-67142845 | None:intergenic | 45.0% | |
| AAGAATCCACTGATGCTCGT+CGG | - | chr5.3:67143213-67143232 | None:intergenic | 45.0% | |
| ACAAAGGACAAGCAAGGGAA+GGG | - | chr5.3:67142825-67142844 | None:intergenic | 45.0% | |
| ACACTTGAACTGTTCTGCCA+AGG | - | chr5.3:67146072-67146091 | None:intergenic | 45.0% | |
| AGAGGAAAATCCGCAGGAAA+AGG | - | chr5.3:67144843-67144862 | None:intergenic | 45.0% | |
| AGCCATGTTGCCAGATGAAA+TGG | + | chr5.3:67146045-67146064 | MS.gene46221:intron | 45.0% | |
| AGGTTACCAAAACAATCCGC+AGG | - | chr5.3:67144823-67144842 | None:intergenic | 45.0% | |
| ATCGAAGACGTTTCATACGC+AGG | + | chr5.3:67142567-67142586 | MS.gene46221:CDS | 45.0% | |
| ATGTCACCAATTTCGAGGCT+AGG | + | chr5.3:67143243-67143262 | MS.gene46221:CDS | 45.0% | |
| ATTGGACAGAGGTGGCTATT+TGG | - | chr5.3:67144293-67144312 | None:intergenic | 45.0% | |
| CAAGCAACGGTTGAGGTAAA+GGG | + | chr5.3:67145469-67145488 | MS.gene46221:intron | 45.0% | |
| CAGCAGGACAAGAACTAGAA+TGG | + | chr5.3:67142956-67142975 | MS.gene46221:CDS | 45.0% | |
| CAGTCCAGCAATAGTGATTC+GGG | - | chr5.3:67143351-67143370 | None:intergenic | 45.0% | |
| CCAAGGACTATCATGGTAGA+GGG | + | chr5.3:67144364-67144383 | MS.gene46221:intron | 45.0% | |
| CCGATTGTGGAATCCAATTC+TGG | + | chr5.3:67144947-67144966 | MS.gene46221:intron | 45.0% | |
| CTCGTAGTCTTCTTTCACCT+CGG | - | chr5.3:67143294-67143313 | None:intergenic | 45.0% | |
| GAAATTGCAGCTGAAGAGTG+AGG | + | chr5.3:67143722-67143741 | MS.gene46221:intron | 45.0% | |
| GCCATGTTGCCAGATGAAAT+GGG | + | chr5.3:67146046-67146065 | MS.gene46221:intron | 45.0% | |
| GCTGAAGAGTGAGGATTTAG+TGG | + | chr5.3:67143731-67143750 | MS.gene46221:intron | 45.0% | |
| GGACAAGAGATTCACTGACA+AGG | + | chr5.3:67143060-67143079 | MS.gene46221:intron | 45.0% | |
| GGATGAGAATCACAAAGGGT+TGG | + | chr5.3:67142720-67142739 | MS.gene46221:CDS | 45.0% | |
| TCAAGCAACGGTTGAGGTAA+AGG | + | chr5.3:67145468-67145487 | MS.gene46221:intron | 45.0% | |
| TCCAAGGACTATCATGGTAG+AGG | + | chr5.3:67144363-67144382 | MS.gene46221:intron | 45.0% | |
| TCCACTGCAAGAAAATCCTC+AGG | + | chr5.3:67144771-67144790 | MS.gene46221:CDS | 45.0% | |
| TCGTAGTCTTCTTTCACCTC+GGG | - | chr5.3:67143293-67143312 | None:intergenic | 45.0% | |
| TGAAGTTCAAGCAACGGTTG+AGG | + | chr5.3:67145462-67145481 | MS.gene46221:CDS | 45.0% | |
| TGCAAAGAGAGGACTGACTA+AGG | + | chr5.3:67144424-67144443 | MS.gene46221:intron | 45.0% | |
| TGCATACATTCAATCGCAGC+CGG | + | chr5.3:67146454-67146473 | MS.gene46221:CDS | 45.0% | |
| TGCTGCGAAAATTTATCCGC+AGG | + | chr5.3:67144690-67144709 | MS.gene46221:intron | 45.0% | |
| TGTTCCCGAATCACTATTGC+TGG | + | chr5.3:67143344-67143363 | MS.gene46221:CDS | 45.0% | |
| ! | ACCTGAGGATTTTCTTGCAG+TGG | - | chr5.3:67144775-67144794 | None:intergenic | 45.0% |
| ! | ATTTTCGCAGCAAAATCCGC+AGG | - | chr5.3:67144682-67144701 | None:intergenic | 45.0% |
| ! | CTTAGGACTGTTTCAGGTGA+TGG | + | chr5.3:67145809-67145828 | MS.gene46221:intron | 45.0% |
| ! | GAGGCATTTGGATTTGAGCA+TGG | + | chr5.3:67142795-67142814 | MS.gene46221:CDS | 45.0% |
| ! | GCAGAATCAGCATCGAGTTT+AGG | - | chr5.3:67142409-67142428 | None:intergenic | 45.0% |
| ! | TTAGTGGCAAAAAGCGTGTG+TGG | - | chr5.3:67144135-67144154 | None:intergenic | 45.0% |
| ! | TTTTGCTGAGGCTTTTCCTG+CGG | + | chr5.3:67144804-67144823 | MS.gene46221:intron | 45.0% |
| !! | GAATCACAAAGGGTTGGTGT+TGG | + | chr5.3:67142726-67142745 | MS.gene46221:CDS | 45.0% |
| !! | GCTTTTCCTGCGGATTGTTT+TGG | + | chr5.3:67144814-67144833 | MS.gene46221:intron | 45.0% |
| !! | TTAAGCTAGCGGACTTTGGA+TGG | + | chr5.3:67146427-67146446 | MS.gene46221:CDS | 45.0% |
| !! | TTTTTAGTCCCTGTGTGGAC+TGG | + | chr5.3:67142871-67142890 | MS.gene46221:CDS | 45.0% |
| !!! | GTGGTTTTATTGGACAGAGG+TGG | - | chr5.3:67144301-67144320 | None:intergenic | 45.0% |
| AATTTCACTTGCGGCGTCTG+AGG | + | chr5.3:67142699-67142718 | MS.gene46221:CDS | 50.0% | |
| ACACAGGATTACCTTCCACC+TGG | + | chr5.3:67146489-67146508 | MS.gene46221:CDS | 50.0% | |
| AGGTGGCTATTTGGACCCAA+TGG | - | chr5.3:67144284-67144303 | None:intergenic | 50.0% | |
| ATGCCTCCTAGCCTCGAAAT+TGG | - | chr5.3:67143252-67143271 | None:intergenic | 50.0% | |
| ATGCGGTGAAGCATGCTGAT+GGG | + | chr5.3:67145005-67145024 | MS.gene46221:CDS | 50.0% | |
| CAAAGGACAAGCAAGGGAAG+GGG | - | chr5.3:67142824-67142843 | None:intergenic | 50.0% | |
| CAACTGAACATACCCATCCC+AGG | - | chr5.3:67146510-67146529 | None:intergenic | 50.0% | |
| CACAGGATTACCTTCCACCT+GGG | + | chr5.3:67146490-67146509 | MS.gene46221:CDS | 50.0% | |
| CACCTCGGGGAATATCATCA+CGG | - | chr5.3:67143279-67143298 | None:intergenic | 50.0% | |
| CATGAGATGCTCATTGGCAG+GGG | + | chr5.3:67143320-67143339 | MS.gene46221:CDS | 50.0% | |
| CCCTCTACCATGATAGTCCT+TGG | - | chr5.3:67144367-67144386 | None:intergenic | 50.0% | |
| CGTAGTCTTCTTTCACCTCG+GGG | - | chr5.3:67143292-67143311 | None:intergenic | 50.0% | |
| CGTGCCCTTATATACTGCCA+TGG | + | chr5.3:67146246-67146265 | MS.gene46221:CDS | 50.0% | |
| CTGGGATGGGTATGTTCAGT+TGG | + | chr5.3:67146508-67146527 | MS.gene46221:intron | 50.0% | |
| CTTGCAGTGGAAGAATCCGT+AGG | - | chr5.3:67144762-67144781 | None:intergenic | 50.0% | |
| GATTACCTTCCACCTGGGAT+GGG | + | chr5.3:67146495-67146514 | MS.gene46221:CDS | 50.0% | |
| GCATGAGATGCTCATTGGCA+GGG | + | chr5.3:67143319-67143338 | MS.gene46221:CDS | 50.0% | |
| GCCCATTTCATCTGGCAACA+TGG | - | chr5.3:67146050-67146069 | None:intergenic | 50.0% | |
| GGTAAAGGGCTTCTGAACGT+TGG | + | chr5.3:67145483-67145502 | MS.gene46221:intron | 50.0% | |
| GGTGGTAAGCAACACAACCA+TGG | - | chr5.3:67142934-67142953 | None:intergenic | 50.0% | |
| GTAATCCTGTGTGCTGCACA+TGG | - | chr5.3:67146481-67146500 | None:intergenic | 50.0% | |
| GTTCAGTCGACGTGAACAAC+TGG | + | chr5.3:67144529-67144548 | MS.gene46221:intron | 50.0% | |
| TCACCAATTTCGAGGCTAGG+AGG | + | chr5.3:67143246-67143265 | MS.gene46221:CDS | 50.0% | |
| TGCATGAGATGCTCATTGGC+AGG | + | chr5.3:67143318-67143337 | MS.gene46221:CDS | 50.0% | |
| TGCTCAAGAGGAAAATCCGC+AGG | - | chr5.3:67144849-67144868 | None:intergenic | 50.0% | |
| TGTCACTCTGTATTTGCGGC+AGG | + | chr5.3:67144340-67144359 | MS.gene46221:intron | 50.0% | |
| TTGCCAGATGAAATGGGCCT+TGG | + | chr5.3:67146052-67146071 | MS.gene46221:intron | 50.0% | |
| ! | TGGCAAAAAGCGTGTGTGGT+TGG | - | chr5.3:67144131-67144150 | None:intergenic | 50.0% |
| !! | AGGTGATGGTGCTGCATCAT+TGG | + | chr5.3:67145823-67145842 | MS.gene46221:CDS | 50.0% |
| !! | CAAAGGGTTGGTGTTGGTTC+AGG | + | chr5.3:67142732-67142751 | MS.gene46221:CDS | 50.0% |
| !! | TCTAGTTCTTGTCCTGCTGC+TGG | - | chr5.3:67142955-67142974 | None:intergenic | 50.0% |
| ACATACCCATCCCAGGTGGA+AGG | - | chr5.3:67146503-67146522 | None:intergenic | 55.0% | |
| AGCCGTGATGATATTCCCCG+AGG | + | chr5.3:67143274-67143293 | MS.gene46221:CDS | 55.0% | |
| AGTTCTTGTCCTGCTGCTGG+TGG | - | chr5.3:67142952-67142971 | None:intergenic | 55.0% | |
| CACTGGAATCGAGCAGCAAC+AGG | + | chr5.3:67142904-67142923 | MS.gene46221:CDS | 55.0% | |
| CTGAACATACCCATCCCAGG+TGG | - | chr5.3:67146507-67146526 | None:intergenic | 55.0% | |
| CTGCCAAGGCCCATTTCATC+TGG | - | chr5.3:67146058-67146077 | None:intergenic | 55.0% | |
| CTGTATTTGCGGCAGGTCCA+AGG | + | chr5.3:67144347-67144366 | MS.gene46221:intron | 55.0% | |
| GATGCGGTGAAGCATGCTGA+TGG | + | chr5.3:67145004-67145023 | MS.gene46221:CDS | 55.0% | |
| GCTCGATTCCAGTCCACACA+GGG | - | chr5.3:67142882-67142901 | None:intergenic | 55.0% | |
| GCTGATCGGTCAACAGACGA+AGG | - | chr5.3:67143006-67143025 | None:intergenic | 55.0% | |
| GGATTACCTTCCACCTGGGA+TGG | + | chr5.3:67146494-67146513 | MS.gene46221:CDS | 55.0% | |
| GGCAGGTCCAAGGACTATCA+TGG | + | chr5.3:67144357-67144376 | MS.gene46221:intron | 55.0% | |
| TCATACGCAGGCTGCACATG+TGG | + | chr5.3:67142579-67142598 | MS.gene46221:CDS | 55.0% | |
| TGCGGTGAAGCATGCTGATG+GGG | + | chr5.3:67145006-67145025 | MS.gene46221:CDS | 55.0% | |
| TGCTCGATTCCAGTCCACAC+AGG | - | chr5.3:67142883-67142902 | None:intergenic | 55.0% | |
| TGGTGGGAGAGAGCTTGATG+CGG | + | chr5.3:67145520-67145539 | MS.gene46221:intron | 55.0% | |
| ! | GCTGAGGGAGTGGTCTCTTT+TGG | + | chr5.3:67143412-67143431 | MS.gene46221:intron | 55.0% |
| ! | TGTTGCTTACCACCAGCAGC+AGG | + | chr5.3:67142940-67142959 | MS.gene46221:CDS | 55.0% |
| AAGCATGCTGATGGGGCTGC+TGG | + | chr5.3:67145013-67145032 | MS.gene46221:CDS | 60.0% | |
| AATGAGGAAGCCACTGGCCC+CGG | + | chr5.3:67143386-67143405 | MS.gene46221:CDS | 60.0% | |
| AGACCACTCCCTCAGCACAC+CGG | - | chr5.3:67143408-67143427 | None:intergenic | 60.0% | |
| CCTGTGTGCTGCACATGGTC+CGG | - | chr5.3:67146476-67146495 | None:intergenic | 60.0% | |
| GAGCAGCAACAGGCTCTCCA+TGG | + | chr5.3:67142914-67142933 | MS.gene46221:CDS | 60.0% | |
| GGACTGGAATCGAGCAGCAC+TGG | + | chr5.3:67142887-67142906 | MS.gene46221:CDS | 60.0% | |
| ! | CGTTGGCGACTGACTCACTG+TGG | + | chr5.3:67145500-67145519 | MS.gene46221:intron | 60.0% |
| ! | GGCGACTGACTCACTGTGGT+GGG | + | chr5.3:67145504-67145523 | MS.gene46221:intron | 60.0% |
| ! | TGGCGACTGACTCACTGTGG+TGG | + | chr5.3:67145503-67145522 | MS.gene46221:intron | 60.0% |
| ACCACTCCCTCAGCACACCG+GGG | - | chr5.3:67143406-67143425 | None:intergenic | 65.0% | |
| AGAGGGCCGACGAGCATCAG+TGG | + | chr5.3:67143204-67143223 | MS.gene46221:CDS | 65.0% | |
| CCGGACCATGTGCAGCACAC+AGG | + | chr5.3:67146473-67146492 | MS.gene46221:CDS | 65.0% | |
| GACCACTCCCTCAGCACACC+GGG | - | chr5.3:67143407-67143426 | None:intergenic | 65.0% | |
| GCAGGCTGCACATGTGGCGT+TGG | + | chr5.3:67142585-67142604 | MS.gene46221:CDS | 65.0% | |
| GCTGATGGGGCTGCTGGAAG+TGG | + | chr5.3:67145019-67145038 | MS.gene46221:CDS | 65.0% | |
| CACTGGCCCCGGTGTGCTGA+GGG | + | chr5.3:67143397-67143416 | MS.gene46221:intron | 70.0% | |
| CCACTGGCCCCGGTGTGCTG+AGG | + | chr5.3:67143396-67143415 | MS.gene46221:intron | 75.0% | |
| CCTCAGCACACCGGGGCCAG+TGG | - | chr5.3:67143399-67143418 | None:intergenic | 75.0% | |
| GCCCCGGTGTGCTGAGGGAG+TGG | + | chr5.3:67143402-67143421 | MS.gene46221:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 67142301 | 67146722 | 67142301 | ID=MS.gene46221 |
| chr5.3 | mRNA | 67142301 | 67146722 | 67142301 | ID=MS.gene46221.t1;Parent=MS.gene46221 |
| chr5.3 | exon | 67142301 | 67142982 | 67142301 | ID=MS.gene46221.t1.exon1;Parent=MS.gene46221.t1 |
| chr5.3 | CDS | 67142301 | 67142982 | 67142301 | ID=cds.MS.gene46221.t1;Parent=MS.gene46221.t1 |
| chr5.3 | exon | 67143138 | 67143407 | 67143138 | ID=MS.gene46221.t1.exon2;Parent=MS.gene46221.t1 |
| chr5.3 | CDS | 67143138 | 67143407 | 67143138 | ID=cds.MS.gene46221.t1;Parent=MS.gene46221.t1 |
| chr5.3 | exon | 67144712 | 67144792 | 67144712 | ID=MS.gene46221.t1.exon3;Parent=MS.gene46221.t1 |
| chr5.3 | CDS | 67144712 | 67144792 | 67144712 | ID=cds.MS.gene46221.t1;Parent=MS.gene46221.t1 |
| chr5.3 | exon | 67144999 | 67145058 | 67144999 | ID=MS.gene46221.t1.exon4;Parent=MS.gene46221.t1 |
| chr5.3 | CDS | 67144999 | 67145058 | 67144999 | ID=cds.MS.gene46221.t1;Parent=MS.gene46221.t1 |
| chr5.3 | exon | 67145405 | 67145483 | 67145405 | ID=MS.gene46221.t1.exon5;Parent=MS.gene46221.t1 |
| chr5.3 | CDS | 67145405 | 67145483 | 67145405 | ID=cds.MS.gene46221.t1;Parent=MS.gene46221.t1 |
| chr5.3 | exon | 67145672 | 67145704 | 67145672 | ID=MS.gene46221.t1.exon6;Parent=MS.gene46221.t1 |
| chr5.3 | CDS | 67145672 | 67145704 | 67145672 | ID=cds.MS.gene46221.t1;Parent=MS.gene46221.t1 |
| chr5.3 | exon | 67145814 | 67145893 | 67145814 | ID=MS.gene46221.t1.exon7;Parent=MS.gene46221.t1 |
| chr5.3 | CDS | 67145814 | 67145893 | 67145814 | ID=cds.MS.gene46221.t1;Parent=MS.gene46221.t1 |
| chr5.3 | exon | 67146214 | 67146323 | 67146214 | ID=MS.gene46221.t1.exon8;Parent=MS.gene46221.t1 |
| chr5.3 | CDS | 67146214 | 67146323 | 67146214 | ID=cds.MS.gene46221.t1;Parent=MS.gene46221.t1 |
| chr5.3 | exon | 67146420 | 67146516 | 67146420 | ID=MS.gene46221.t1.exon9;Parent=MS.gene46221.t1 |
| chr5.3 | CDS | 67146420 | 67146516 | 67146420 | ID=cds.MS.gene46221.t1;Parent=MS.gene46221.t1 |
| chr5.3 | exon | 67146640 | 67146722 | 67146640 | ID=MS.gene46221.t1.exon10;Parent=MS.gene46221.t1 |
| chr5.3 | CDS | 67146640 | 67146722 | 67146640 | ID=cds.MS.gene46221.t1;Parent=MS.gene46221.t1 |
| Gene Sequence |
| Protein sequence |
