Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46336.t1 | XP_013457519.1 | 80.8 | 338 | 30 | 3 | 287 | 605 | 21 | 342 | 2.50E-135 | 492.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46336.t1 | Q1PF16 | 32.6 | 282 | 160 | 7 | 328 | 598 | 31 | 293 | 2.1e-26 | 122.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46336.t1 | A0A072V0A3 | 80.8 | 338 | 30 | 3 | 287 | 605 | 21 | 342 | 1.8e-135 | 492.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene46336.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46336.t1 | MTR_4g098035 | 81.065 | 338 | 29 | 4 | 287 | 605 | 21 | 342 | 0.0 | 532 |
MS.gene46336.t1 | MTR_0246s0050 | 81.009 | 337 | 29 | 4 | 288 | 605 | 1 | 321 | 0.0 | 530 |
MS.gene46336.t1 | MTR_0246s0020 | 48.656 | 372 | 121 | 14 | 289 | 605 | 23 | 379 | 2.26e-90 | 285 |
MS.gene46336.t1 | MTR_4g067010 | 50.156 | 321 | 130 | 13 | 289 | 603 | 23 | 319 | 3.54e-80 | 256 |
MS.gene46336.t1 | MTR_6g047570 | 47.164 | 335 | 139 | 13 | 289 | 605 | 22 | 336 | 6.15e-76 | 245 |
MS.gene46336.t1 | MTR_0246s0020 | 45.604 | 364 | 126 | 15 | 289 | 597 | 23 | 369 | 1.19e-75 | 246 |
MS.gene46336.t1 | MTR_0011s0260 | 45.977 | 348 | 146 | 13 | 289 | 604 | 22 | 359 | 6.17e-75 | 243 |
MS.gene46336.t1 | MTR_0011s0210 | 45.559 | 349 | 148 | 13 | 289 | 605 | 22 | 360 | 6.63e-75 | 243 |
MS.gene46336.t1 | MTR_4g066380 | 44.838 | 339 | 156 | 11 | 277 | 603 | 5 | 324 | 7.90e-71 | 232 |
MS.gene46336.t1 | MTR_4g066460 | 46.547 | 333 | 136 | 14 | 289 | 605 | 23 | 329 | 1.00e-69 | 229 |
MS.gene46336.t1 | MTR_0250s0040 | 49.004 | 251 | 106 | 7 | 366 | 605 | 26 | 265 | 4.99e-65 | 214 |
MS.gene46336.t1 | MTR_5g014520 | 42.453 | 318 | 156 | 8 | 297 | 604 | 33 | 333 | 3.89e-58 | 198 |
MS.gene46336.t1 | MTR_5g014560 | 51.596 | 188 | 81 | 3 | 426 | 604 | 121 | 307 | 3.10e-50 | 176 |
MS.gene46336.t1 | MTR_2g070750 | 70.079 | 127 | 34 | 2 | 32 | 158 | 1 | 123 | 3.76e-48 | 171 |
MS.gene46336.t1 | MTR_6g047550 | 48.511 | 235 | 90 | 12 | 289 | 505 | 22 | 243 | 2.07e-42 | 154 |
MS.gene46336.t1 | MTR_4g130640 | 70.192 | 104 | 28 | 2 | 1 | 101 | 1 | 104 | 2.21e-41 | 147 |
MS.gene46336.t1 | MTR_5g014600 | 42.000 | 200 | 96 | 2 | 421 | 600 | 135 | 334 | 3.27e-41 | 152 |
MS.gene46336.t1 | MTR_2g010450 | 35.135 | 296 | 156 | 4 | 342 | 603 | 60 | 353 | 1.45e-40 | 151 |
MS.gene46336.t1 | MTR_4g009540 | 37.872 | 235 | 133 | 2 | 380 | 601 | 97 | 331 | 9.88e-39 | 145 |
MS.gene46336.t1 | MTR_4g097920 | 39.884 | 173 | 99 | 2 | 428 | 595 | 133 | 305 | 2.38e-35 | 135 |
MS.gene46336.t1 | MTR_4g097920 | 39.884 | 173 | 99 | 2 | 428 | 595 | 148 | 320 | 2.91e-35 | 135 |
MS.gene46336.t1 | MTR_4g097950 | 36.255 | 251 | 138 | 3 | 372 | 602 | 3 | 251 | 3.23e-35 | 133 |
MS.gene46336.t1 | MTR_4g097940 | 41.143 | 175 | 94 | 3 | 428 | 595 | 148 | 320 | 3.38e-35 | 135 |
MS.gene46336.t1 | MTR_4g092700 | 40.678 | 177 | 98 | 1 | 434 | 603 | 157 | 333 | 1.96e-33 | 130 |
MS.gene46336.t1 | MTR_4g009110 | 36.032 | 247 | 125 | 5 | 380 | 601 | 112 | 350 | 1.35e-32 | 129 |
MS.gene46336.t1 | MTR_8g009020 | 33.610 | 241 | 138 | 4 | 376 | 596 | 80 | 318 | 1.52e-32 | 128 |
MS.gene46336.t1 | MTR_4g009540 | 37.383 | 214 | 121 | 2 | 380 | 580 | 97 | 310 | 2.62e-32 | 127 |
MS.gene46336.t1 | MTR_5g014640 | 36.158 | 177 | 109 | 1 | 428 | 600 | 147 | 323 | 6.26e-32 | 126 |
MS.gene46336.t1 | MTR_2g104560 | 33.784 | 222 | 130 | 5 | 388 | 602 | 15 | 226 | 1.66e-31 | 122 |
MS.gene46336.t1 | MTR_2g104490 | 35.433 | 254 | 134 | 9 | 364 | 595 | 57 | 302 | 5.44e-31 | 123 |
MS.gene46336.t1 | MTR_2g104550 | 34.673 | 199 | 112 | 3 | 419 | 604 | 122 | 315 | 1.63e-29 | 119 |
MS.gene46336.t1 | MTR_7g080780 | 31.418 | 261 | 162 | 6 | 345 | 601 | 69 | 316 | 5.81e-28 | 115 |
MS.gene46336.t1 | MTR_7g080780 | 31.418 | 261 | 162 | 6 | 345 | 601 | 82 | 329 | 8.44e-28 | 115 |
MS.gene46336.t1 | MTR_2g104650 | 32.000 | 225 | 123 | 6 | 399 | 599 | 49 | 267 | 1.27e-25 | 107 |
MS.gene46336.t1 | MTR_2g104490 | 34.310 | 239 | 127 | 9 | 364 | 580 | 57 | 287 | 3.01e-25 | 106 |
MS.gene46336.t1 | MTR_2g104500 | 33.824 | 204 | 119 | 4 | 407 | 601 | 76 | 272 | 9.71e-25 | 104 |
MS.gene46336.t1 | MTR_8g009010 | 29.749 | 279 | 124 | 8 | 353 | 596 | 26 | 267 | 5.22e-24 | 103 |
MS.gene46336.t1 | MTR_4g009510 | 37.662 | 154 | 91 | 3 | 446 | 598 | 53 | 202 | 7.71e-24 | 100 |
MS.gene46336.t1 | MTR_2g104530 | 32.020 | 203 | 130 | 4 | 399 | 596 | 70 | 269 | 1.38e-23 | 101 |
MS.gene46336.t1 | MTR_8g069740 | 34.807 | 181 | 106 | 5 | 409 | 579 | 87 | 265 | 1.25e-22 | 98.2 |
MS.gene46336.t1 | MTR_4g009420 | 39.855 | 138 | 72 | 2 | 461 | 598 | 68 | 194 | 3.25e-22 | 95.1 |
MS.gene46336.t1 | MTR_7g451650 | 38.849 | 139 | 80 | 3 | 461 | 598 | 60 | 194 | 1.55e-21 | 93.2 |
MS.gene46336.t1 | MTR_7g050350 | 37.778 | 135 | 79 | 3 | 465 | 598 | 2 | 132 | 1.69e-20 | 88.2 |
MS.gene46336.t1 | MTR_7g451650 | 37.778 | 135 | 79 | 3 | 465 | 598 | 2 | 132 | 1.69e-20 | 88.2 |
MS.gene46336.t1 | MTR_2g104590 | 33.673 | 196 | 108 | 8 | 409 | 599 | 44 | 222 | 2.55e-20 | 90.9 |
MS.gene46336.t1 | MTR_5g014550 | 43.443 | 122 | 60 | 2 | 465 | 578 | 54 | 174 | 5.91e-20 | 88.6 |
MS.gene46336.t1 | MTR_4g009420 | 37.903 | 124 | 66 | 2 | 461 | 584 | 68 | 180 | 2.04e-15 | 75.9 |
MS.gene46336.t1 | MTR_7g451650 | 37.190 | 121 | 71 | 3 | 461 | 580 | 60 | 176 | 4.49e-15 | 74.3 |
MS.gene46336.t1 | MTR_7g117670 | 31.373 | 153 | 95 | 4 | 435 | 582 | 402 | 549 | 3.79e-14 | 75.9 |
MS.gene46336.t1 | MTR_1g072320 | 28.485 | 165 | 98 | 3 | 416 | 560 | 446 | 610 | 1.60e-12 | 70.9 |
MS.gene46336.t1 | MTR_8g027495 | 30.061 | 163 | 102 | 5 | 435 | 592 | 458 | 613 | 5.99e-12 | 68.9 |
MS.gene46336.t1 | MTR_8g067280 | 30.070 | 143 | 82 | 2 | 435 | 559 | 462 | 604 | 2.76e-11 | 67.0 |
MS.gene46336.t1 | MTR_8g024790 | 31.061 | 132 | 76 | 5 | 435 | 553 | 291 | 420 | 6.72e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46336.t1 | AT2G22760 | 39.153 | 189 | 102 | 4 | 424 | 600 | 108 | 295 | 1.10e-35 | 136 |
MS.gene46336.t1 | AT2G22770 | 36.082 | 194 | 102 | 2 | 427 | 598 | 124 | 317 | 2.87e-32 | 127 |
MS.gene46336.t1 | AT4G37850 | 39.037 | 187 | 100 | 4 | 428 | 603 | 145 | 328 | 5.68e-32 | 126 |
MS.gene46336.t1 | AT4G37850 | 39.037 | 187 | 100 | 4 | 428 | 603 | 145 | 328 | 5.68e-32 | 126 |
MS.gene46336.t1 | AT2G22760 | 39.286 | 168 | 90 | 3 | 424 | 580 | 108 | 274 | 8.08e-31 | 122 |
MS.gene46336.t1 | AT2G22750 | 36.364 | 187 | 106 | 3 | 428 | 602 | 119 | 304 | 4.14e-27 | 112 |
MS.gene46336.t1 | AT2G22750 | 36.364 | 187 | 106 | 3 | 428 | 602 | 143 | 328 | 6.13e-27 | 112 |
MS.gene46336.t1 | AT2G22750 | 36.364 | 187 | 106 | 3 | 428 | 602 | 147 | 332 | 6.27e-27 | 112 |
MS.gene46336.t1 | AT2G22750 | 36.364 | 187 | 105 | 4 | 428 | 602 | 119 | 303 | 5.86e-26 | 108 |
MS.gene46336.t1 | AT2G22750 | 36.364 | 187 | 105 | 4 | 428 | 602 | 147 | 331 | 7.11e-26 | 109 |
MS.gene46336.t1 | AT1G79740 | 28.571 | 245 | 155 | 6 | 39 | 278 | 17 | 246 | 9.64e-21 | 97.1 |
MS.gene46336.t1 | AT1G79740 | 28.571 | 245 | 155 | 6 | 39 | 278 | 17 | 246 | 9.64e-21 | 97.1 |
MS.gene46336.t1 | AT3G13020 | 24.528 | 265 | 168 | 9 | 44 | 292 | 23 | 271 | 9.50e-17 | 84.3 |
MS.gene46336.t1 | AT3G17450 | 24.664 | 223 | 163 | 4 | 108 | 329 | 276 | 494 | 4.81e-16 | 82.4 |
MS.gene46336.t1 | AT3G17450 | 24.664 | 223 | 163 | 4 | 108 | 329 | 276 | 494 | 4.81e-16 | 82.4 |
MS.gene46336.t1 | AT1G43260 | 31.361 | 169 | 107 | 4 | 136 | 299 | 35 | 199 | 2.49e-15 | 77.4 |
MS.gene46336.t1 | AT5G46760 | 29.282 | 181 | 94 | 6 | 435 | 584 | 415 | 592 | 2.09e-13 | 73.6 |
MS.gene46336.t1 | AT1G79740 | 33.019 | 106 | 68 | 1 | 173 | 278 | 11 | 113 | 1.49e-12 | 70.9 |
MS.gene46336.t1 | AT1G79740 | 33.019 | 106 | 68 | 1 | 173 | 278 | 11 | 113 | 1.49e-12 | 70.9 |
MS.gene46336.t1 | AT3G13010 | 23.106 | 264 | 150 | 10 | 44 | 292 | 22 | 247 | 2.43e-12 | 70.1 |
MS.gene46336.t1 | AT2G46510 | 36.559 | 93 | 53 | 2 | 435 | 523 | 395 | 485 | 2.71e-12 | 70.1 |
MS.gene46336.t1 | AT4G17880 | 30.921 | 152 | 77 | 4 | 435 | 565 | 416 | 560 | 3.99e-12 | 69.7 |
MS.gene46336.t1 | AT4G09820 | 33.333 | 114 | 63 | 2 | 436 | 549 | 364 | 464 | 5.34e-12 | 68.9 |
MS.gene46336.t1 | AT1G32640 | 29.323 | 133 | 86 | 2 | 435 | 559 | 452 | 584 | 1.35e-11 | 67.8 |
MS.gene46336.t1 | AT1G01260 | 26.000 | 150 | 95 | 3 | 431 | 579 | 429 | 563 | 2.95e-11 | 66.6 |
MS.gene46336.t1 | AT1G01260 | 26.000 | 150 | 95 | 3 | 431 | 579 | 429 | 563 | 2.95e-11 | 66.6 |
MS.gene46336.t1 | AT1G01260 | 26.000 | 150 | 95 | 3 | 431 | 579 | 429 | 563 | 2.95e-11 | 66.6 |
MS.gene46336.t1 | AT1G63650 | 29.054 | 148 | 80 | 2 | 435 | 557 | 405 | 552 | 7.85e-11 | 65.5 |
MS.gene46336.t1 | AT1G63650 | 29.054 | 148 | 80 | 2 | 435 | 557 | 405 | 552 | 7.85e-11 | 65.5 |
MS.gene46336.t1 | AT1G63650 | 29.054 | 148 | 80 | 2 | 435 | 557 | 405 | 552 | 7.85e-11 | 65.5 |
Find 120 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAGTGTCATTGCCCAATT+TGG | 0.113408 | 8.4:+24536070 | MS.gene46336:CDS |
CCATATAACTCTGTTGGGTT+TGG | 0.235162 | 8.4:-24536029 | None:intergenic |
AAAATGTGTGTTTCCCAAAT+TGG | 0.240242 | 8.4:-24536084 | None:intergenic |
ATTCCTATCATCAACATTAA+AGG | 0.241813 | 8.4:-24534278 | None:intergenic |
CTAGTAACACTTTCTTCTAT+TGG | 0.245408 | 8.4:-24533905 | None:intergenic |
CAAGAAGTCCATCATGCTTT+TGG | 0.260795 | 8.4:-24537155 | None:intergenic |
CATATAACTCTGTTGGGTTT+GGG | 0.267769 | 8.4:-24536028 | None:intergenic |
TAGTGGTTTATTATCATCTT+GGG | 0.267952 | 8.4:-24533948 | None:intergenic |
CACTTTCAGTTTCACAATAA+TGG | 0.277610 | 8.4:-24537062 | None:intergenic |
ATGCTTGTCTTTATATTCAT+TGG | 0.281849 | 8.4:-24534632 | None:intergenic |
CCAAACCCAACAGAGTTATA+TGG | 0.288363 | 8.4:+24536029 | MS.gene46336:CDS |
TCTTAGATTGTGAAGATTCT+TGG | 0.298433 | 8.4:-24536112 | None:intergenic |
TTGGGGATGCTACTGCTATC+AGG | 0.300999 | 8.4:+24537085 | MS.gene46336:CDS |
AGTTACTTCTTACCTTCTTT+AGG | 0.329290 | 8.4:-24536232 | None:intergenic |
TTACATTGGTTTCTGATGGC+TGG | 0.355948 | 8.4:+24534527 | MS.gene46336:CDS |
GAAGGCAATGGAACATGTTT+AGG | 0.356160 | 8.4:-24534190 | None:intergenic |
ATGCCTTTAATGTTGATGAT+AGG | 0.358646 | 8.4:+24534275 | MS.gene46336:CDS |
CTTAGATTGTGAAGATTCTT+GGG | 0.360163 | 8.4:-24536111 | None:intergenic |
GGCTAGTGCCATTGCCTTTG+AGG | 0.361619 | 8.4:+24535803 | MS.gene46336:CDS |
AATTGTTGGTGAAGGAGTTC+AGG | 0.364290 | 8.4:+24534093 | MS.gene46336:CDS |
ATGCTGCCATGCGTAGATTC+TGG | 0.364951 | 8.4:-24539816 | None:intergenic |
TCATGTAAAAGATCACATTA+TGG | 0.390558 | 8.4:+24536145 | MS.gene46336:CDS |
CTTCTTACCTTCTTTAGGTC+AGG | 0.391987 | 8.4:-24536227 | None:intergenic |
AAAATCTTTGTGGACATTGA+AGG | 0.393468 | 8.4:+24534501 | MS.gene46336:CDS |
TGAGATTTGAGACGGTTTAG+AGG | 0.400107 | 8.4:-24534212 | None:intergenic |
TGTTTCCCATATAACTCTGT+TGG | 0.402985 | 8.4:-24536035 | None:intergenic |
ATATAAAGACAAGCATTATA+TGG | 0.412417 | 8.4:+24534639 | MS.gene46336:CDS |
ATAGTGGTTTATTATCATCT+TGG | 0.414638 | 8.4:-24533949 | None:intergenic |
TTCAACCTATAAAATCTTTG+TGG | 0.421167 | 8.4:+24534491 | MS.gene46336:CDS |
TTTCACTTATTGAAAATTGT+TGG | 0.424312 | 8.4:+24534079 | MS.gene46336:CDS |
AAATGTGTGTTTCCCAAATT+GGG | 0.425335 | 8.4:-24536083 | None:intergenic |
AGGCCTTTGATAAATTTCAT+TGG | 0.428234 | 8.4:+24534565 | MS.gene46336:CDS |
TCAGTGTCATTGCCCAATTT+GGG | 0.429779 | 8.4:+24536071 | MS.gene46336:CDS |
GTTTCCCATATAACTCTGTT+GGG | 0.433812 | 8.4:-24536034 | None:intergenic |
CTGCAGGTGGAAACAAGCTT+TGG | 0.435890 | 8.4:+24534005 | MS.gene46336:CDS |
AAGATGATAATAAACCACTA+TGG | 0.438152 | 8.4:+24533951 | MS.gene46336:CDS |
AGGGTAGAAGCAAAAGTGTC+AGG | 0.446583 | 8.4:+24537105 | MS.gene46336:CDS |
GGGGTTACATTGGTTTCTGA+TGG | 0.454194 | 8.4:+24534523 | MS.gene46336:CDS |
ATTCCCGCAGCCTTGCAAAC+AGG | 0.456455 | 8.4:-24534733 | None:intergenic |
TAAGGTTACTGATATATTGT+TGG | 0.457293 | 8.4:+24534123 | MS.gene46336:CDS |
TCAGTTTCACAATAATGGTC+TGG | 0.457881 | 8.4:-24537057 | None:intergenic |
AAATCTTTGTGGACATTGAA+GGG | 0.458169 | 8.4:+24534502 | MS.gene46336:CDS |
CATATTTAAAGATGTTATCA+AGG | 0.460474 | 8.4:+24534666 | MS.gene46336:CDS |
GATAACATCTTTAAATATGT+TGG | 0.460636 | 8.4:-24534662 | None:intergenic |
CAAACCCAACAGAGTTATAT+GGG | 0.463398 | 8.4:+24536030 | MS.gene46336:CDS |
ATTGTGAAACTGAAAGTGTT+GGG | 0.464665 | 8.4:+24537067 | MS.gene46336:CDS |
GAATAAGAACTAACATAGTA+AGG | 0.470353 | 8.4:-24534367 | None:intergenic |
ATATTCTTAAAAGCTATAGA+TGG | 0.475181 | 8.4:+24534607 | MS.gene46336:CDS |
TGCTCCTGTTTGCAAGGCTG+CGG | 0.477808 | 8.4:+24534729 | MS.gene46336:CDS |
GTAACACTTTCTTCTATTGG+AGG | 0.479958 | 8.4:-24533902 | None:intergenic |
GAGCTCTGCAAGAGCAATGA+AGG | 0.483970 | 8.4:-24536201 | None:intergenic |
TAGTTGATAACTTTGAATCT+CGG | 0.486449 | 8.4:-24537190 | None:intergenic |
CAGGTGGAAACAAGCTTTGG+AGG | 0.493929 | 8.4:+24534008 | MS.gene46336:CDS |
TGGTGGAAATGCATTGTTGT+AGG | 0.499868 | 8.4:-24535839 | None:intergenic |
TTCACAATCTAAGAGGTCTT+CGG | 0.500930 | 8.4:+24536121 | MS.gene46336:CDS |
ATTTGAGACGGTTTAGAGGA+AGG | 0.510024 | 8.4:-24534208 | None:intergenic |
AAAGATGTTATCAAGGAGGT+AGG | 0.520813 | 8.4:+24534673 | MS.gene46336:CDS |
GCTCCTGTTTGCAAGGCTGC+GGG | 0.521258 | 8.4:+24534730 | MS.gene46336:CDS |
TTCATTGGCATTTGTGAAGG+AGG | 0.524017 | 8.4:+24534580 | MS.gene46336:CDS |
AATCAACTTGCAGGAAAAGG+TGG | 0.532498 | 8.4:+24535701 | MS.gene46336:intron |
GTTCTTAGAGCATTATAACT+AGG | 0.540558 | 8.4:-24534427 | None:intergenic |
AATTTCATTGGCATTTGTGA+AGG | 0.542506 | 8.4:+24534577 | MS.gene46336:CDS |
AAGAATCTTCACAATCTAAG+AGG | 0.543878 | 8.4:+24536114 | MS.gene46336:CDS |
ATCCATTGCCAAAAGCATGA+TGG | 0.544018 | 8.4:+24537147 | MS.gene46336:CDS |
AACAATATATCAGTAACCTT+AGG | 0.552336 | 8.4:-24534121 | None:intergenic |
GCTCATTCCTGACCTAAAGA+AGG | 0.552916 | 8.4:+24536220 | MS.gene46336:CDS |
AGTGGTTTATTATCATCTTG+GGG | 0.553193 | 8.4:-24533947 | None:intergenic |
AAGAGAGAGCTAATATTGAA+AGG | 0.557059 | 8.4:+24534464 | MS.gene46336:CDS |
ACAGTGACAAATTTCCATAG+TGG | 0.558609 | 8.4:-24533965 | None:intergenic |
GAATGTTTCGCTTAGAGTGG+TGG | 0.560814 | 8.4:-24535856 | None:intergenic |
TGGGGATGCTACTGCTATCA+GGG | 0.560919 | 8.4:+24537086 | MS.gene46336:CDS |
AAGATGTTATCAAGGAGGTA+GGG | 0.562728 | 8.4:+24534674 | MS.gene46336:CDS |
TATTGTGAAACTGAAAGTGT+TGG | 0.563293 | 8.4:+24537066 | MS.gene46336:CDS |
TCTTTGTTCCTCAAAGGCAA+TGG | 0.566921 | 8.4:-24535811 | None:intergenic |
TTATTGAAAATTGTTGGTGA+AGG | 0.567521 | 8.4:+24534085 | MS.gene46336:CDS |
GGTCTCTCTTTGTTCCTCAA+AGG | 0.568777 | 8.4:-24535817 | None:intergenic |
ATTGAATGTTTCGCTTAGAG+TGG | 0.570806 | 8.4:-24535859 | None:intergenic |
GGTGGAAATGCATTGTTGTA+GGG | 0.580044 | 8.4:-24535838 | None:intergenic |
ACTCTAAGCGAAACATTCAA+TGG | 0.582474 | 8.4:+24535861 | MS.gene46336:CDS |
CAGCAATGATTGTAATGTCG+TGG | 0.584079 | 8.4:-24537254 | None:intergenic |
AATCTTTGTGGACATTGAAG+GGG | 0.584312 | 8.4:+24534503 | MS.gene46336:CDS |
AGGAGTTCAGGTATGTCCTA+AGG | 0.586312 | 8.4:+24534105 | MS.gene46336:CDS |
TCTCTCTTGCTTCAAAAGAG+TGG | 0.587468 | 8.4:-24534449 | None:intergenic |
AGAGTTTCTCTCACGTAACA+TGG | 0.590021 | 8.4:+24535782 | MS.gene46336:CDS |
GTGCAGATTAATGATTCTGC+AGG | 0.590288 | 8.4:+24533989 | MS.gene46336:CDS |
ATCAACTTGCAGGAAAAGGT+GGG | 0.593520 | 8.4:+24535702 | MS.gene46336:intron |
CAGATTAATGATTCTGCAGG+TGG | 0.593686 | 8.4:+24533992 | MS.gene46336:CDS |
ATCTTTGTGGACATTGAAGG+GGG | 0.596082 | 8.4:+24534504 | MS.gene46336:CDS |
GAGCATTATAACTAGGAGGA+AGG | 0.596395 | 8.4:-24534420 | None:intergenic |
ATGCCAATGAAATTTATCAA+AGG | 0.597845 | 8.4:-24534568 | None:intergenic |
CAGCATCAAGCAAGTTCAAG+TGG | 0.598514 | 8.4:-24535749 | None:intergenic |
GGGTAGAAGCAAAAGTGTCA+GGG | 0.600504 | 8.4:+24537106 | MS.gene46336:CDS |
CTTAGAGCATTATAACTAGG+AGG | 0.603404 | 8.4:-24534424 | None:intergenic |
GCTGGACTGATGTGCAAAGG+AGG | 0.607110 | 8.4:+24534545 | MS.gene46336:CDS |
ATTGGGCAATGACACTGAAG+TGG | 0.611878 | 8.4:-24536066 | None:intergenic |
TGATAATGCTCCTGTTTGCA+AGG | 0.612535 | 8.4:+24534723 | MS.gene46336:CDS |
GACGGTTTAGAGGAAGGCAA+TGG | 0.613977 | 8.4:-24534202 | None:intergenic |
ACTACTGGTGAGATTTGAGA+CGG | 0.614919 | 8.4:-24534220 | None:intergenic |
AAAGACGACTGAAAGGTGGA+TGG | 0.619355 | 8.4:-24535999 | None:intergenic |
TTGTGAAACTGAAAGTGTTG+GGG | 0.636827 | 8.4:+24537068 | MS.gene46336:CDS |
GTTGTCAAAAGACGACTGAA+AGG | 0.637121 | 8.4:-24536006 | None:intergenic |
ATATGTTAATTAGAAGGACA+AGG | 0.637697 | 8.4:+24536918 | MS.gene46336:intron |
ATGGCTGGACTGATGTGCAA+AGG | 0.638100 | 8.4:+24534542 | MS.gene46336:CDS |
GCTGCTAATCACAGCCTCAG+TGG | 0.642216 | 8.4:+24534394 | MS.gene46336:CDS |
CACAAAGGAAGATCAATCGA+TGG | 0.644880 | 8.4:+24537020 | MS.gene46336:CDS |
GGAGTTCATACTCTAGAGTG+AGG | 0.646319 | 8.4:+24534056 | MS.gene46336:CDS |
GAACTTGCTTGATGCTGACG+TGG | 0.647274 | 8.4:+24535755 | MS.gene46336:CDS |
GGGTGAATACATATTTGATG+AGG | 0.650159 | 8.4:+24535722 | MS.gene46336:CDS |
AGCTTAGAGAAACTATAGCA+AGG | 0.650424 | 8.4:+24534302 | MS.gene46336:CDS |
CGACATTACAATCATTGCTG+AGG | 0.658041 | 8.4:+24537257 | MS.gene46336:CDS |
GTCAAAAGACGACTGAAAGG+TGG | 0.660762 | 8.4:-24536003 | None:intergenic |
TTTGAATAGAATATGTGAAG+AGG | 0.662831 | 8.4:+24534150 | MS.gene46336:CDS |
AGAAAACGAAGAGAGAAACT+CGG | 0.672023 | 8.4:+24536173 | MS.gene46336:CDS |
ACTCGTCCAGAATCTACGCA+TGG | 0.674291 | 8.4:+24539810 | MS.gene46336:CDS |
TAGGAGGAAGGAAGCCACTG+AGG | 0.674505 | 8.4:-24534408 | None:intergenic |
ATTTAAAGATGTTATCAAGG+AGG | 0.682926 | 8.4:+24534669 | MS.gene46336:CDS |
AGAAGAAGGAAAGAACACAA+AGG | 0.683823 | 8.4:+24537005 | MS.gene46336:CDS |
AAAGGAAGATCAATCGATGG+TGG | 0.686344 | 8.4:+24537023 | MS.gene46336:CDS |
AACGCTCTTTAAGCTCTCTG+AGG | 0.694337 | 8.4:-24536969 | None:intergenic |
ACTATGGAAATTTGTCACTG+TGG | 0.767503 | 8.4:+24533967 | MS.gene46336:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATAAATAATAAAGAG+AGG | + | chr8.4:24537944-24537963 | MS.gene46336:intron | 10.0% |
!! | AAATAATATCATATAAGATA+TGG | - | chr8.4:24537632-24537651 | None:intergenic | 10.0% |
!! | ATAATTTAAGAAAATTAAAG+TGG | - | chr8.4:24536510-24536529 | None:intergenic | 10.0% |
!! | ATTTATTAACTAATAAATCT+TGG | + | chr8.4:24535037-24535056 | MS.gene46336:intron | 10.0% |
!! | TTAACTAATCATTAAATATT+GGG | + | chr8.4:24538032-24538051 | MS.gene46336:intron | 10.0% |
!! | TTTAACTAATCATTAAATAT+TGG | + | chr8.4:24538031-24538050 | MS.gene46336:intron | 10.0% |
!!! | TAAAGAATAATTGTTTATTT+TGG | - | chr8.4:24537815-24537834 | None:intergenic | 10.0% |
!!! | TCTCTTTATTATTTATTTTT+TGG | - | chr8.4:24537945-24537964 | None:intergenic | 10.0% |
!!! | TTCTTTTTTGATAAAAAATT+AGG | + | chr8.4:24539189-24539208 | MS.gene46336:intron | 10.0% |
!!! | TTTTATTGGTAAAAAAATAA+AGG | + | chr8.4:24537749-24537768 | MS.gene46336:intron | 10.0% |
!! | AAACAAATTTGAATTTACTA+GGG | + | chr8.4:24538457-24538476 | MS.gene46336:intron | 15.0% |
!! | AAACCTATTAAAATTAAGTA+AGG | + | chr8.4:24538518-24538537 | MS.gene46336:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | - | chr8.4:24538106-24538125 | None:intergenic | 15.0% |
!! | ACAAAATAAACTTTATGATA+TGG | - | chr8.4:24537378-24537397 | None:intergenic | 15.0% |
!! | AGTTAAAAGTAACAAAAATT+TGG | + | chr8.4:24538327-24538346 | MS.gene46336:intron | 15.0% |
!! | CAAAACATCAAAATATTTAA+GGG | - | chr8.4:24538591-24538610 | None:intergenic | 15.0% |
!! | CATTTAATTAATGATATATG+TGG | + | chr8.4:24539384-24539403 | MS.gene46336:intron | 15.0% |
!! | GTTTAGAAATTTCTATATAT+GGG | - | chr8.4:24539503-24539522 | None:intergenic | 15.0% |
!! | TAAACAAATTTGAATTTACT+AGG | + | chr8.4:24538456-24538475 | MS.gene46336:intron | 15.0% |
!! | TGTAAAATATGTTAATTAGA+AGG | + | chr8.4:24536912-24536931 | MS.gene46336:intron | 15.0% |
!! | TGTATATTAGTAGAAAAATA+TGG | + | chr8.4:24537657-24537676 | MS.gene46336:intron | 15.0% |
!! | TTTAGAAATTTCTATATATG+GGG | - | chr8.4:24539502-24539521 | None:intergenic | 15.0% |
!!! | ATTCTCTTTAAAATAAACAA+CGG | - | chr8.4:24539068-24539087 | None:intergenic | 15.0% |
!!! | CTTAATTTTAATAGGTTTTT+TGG | - | chr8.4:24538516-24538535 | None:intergenic | 15.0% |
!!! | GATATTTTATTAGTAAAAGA+TGG | - | chr8.4:24537356-24537375 | None:intergenic | 15.0% |
!!! | TAGAAGTTTTCAATTTTATA+GGG | - | chr8.4:24538075-24538094 | None:intergenic | 15.0% |
!!! | TAGAATCTATTTCTAAAATA+TGG | - | chr8.4:24539216-24539235 | None:intergenic | 15.0% |
!!! | TATCATGAACTTAAATTTTA+GGG | + | chr8.4:24538866-24538885 | MS.gene46336:intron | 15.0% |
!!! | TCAAATATTCATTTTTTTGT+TGG | - | chr8.4:24539270-24539289 | None:intergenic | 15.0% |
!!! | TTAGAAGTTTTCAATTTTAT+AGG | - | chr8.4:24538076-24538095 | None:intergenic | 15.0% |
!! | AAATATAAATGAGAAAACAG+TGG | - | chr8.4:24539139-24539158 | None:intergenic | 20.0% |
!! | AAGTTCATGATACAAAAAAT+AGG | - | chr8.4:24538858-24538877 | None:intergenic | 20.0% |
!! | ATAAATTAAAATAAAGCACG+TGG | - | chr8.4:24535023-24535042 | None:intergenic | 20.0% |
!! | ATATAAAGACAAGCATTATA+TGG | + | chr8.4:24534639-24534658 | MS.gene46336:CDS | 20.0% |
!! | ATATTCTTAAAAGCTATAGA+TGG | + | chr8.4:24534607-24534626 | MS.gene46336:CDS | 20.0% |
!! | ATTATTCTCTTTGTCAAAAA+AGG | + | chr8.4:24538718-24538737 | MS.gene46336:intron | 20.0% |
!! | CAAGATTAGAATATTATGAA+AGG | + | chr8.4:24538230-24538249 | MS.gene46336:intron | 20.0% |
!! | CATATTTAAAGATGTTATCA+AGG | + | chr8.4:24534666-24534685 | MS.gene46336:CDS | 20.0% |
!! | GATAACATCTTTAAATATGT+TGG | - | chr8.4:24534665-24534684 | None:intergenic | 20.0% |
!! | GCAAAACATCAAAATATTTA+AGG | - | chr8.4:24538592-24538611 | None:intergenic | 20.0% |
!! | GGTTTAGAAATTTCTATATA+TGG | - | chr8.4:24539504-24539523 | None:intergenic | 20.0% |
!! | TAAATTAAAATAAAGCACGT+GGG | - | chr8.4:24535022-24535041 | None:intergenic | 20.0% |
!! | TGCTTATAATTAAAAACAGA+GGG | + | chr8.4:24539461-24539480 | MS.gene46336:intron | 20.0% |
!! | TGCTTATAATTAAAAACGAA+TGG | - | chr8.4:24539346-24539365 | None:intergenic | 20.0% |
!! | TTAGAAATTTCTATATATGG+GGG | - | chr8.4:24539501-24539520 | None:intergenic | 20.0% |
!! | TTATTCTCTTTGTCAAAAAA+GGG | + | chr8.4:24538719-24538738 | MS.gene46336:intron | 20.0% |
!! | TTGCTTATAATTAAAAACAG+AGG | + | chr8.4:24539460-24539479 | MS.gene46336:intron | 20.0% |
!! | TTTCACTTATTGAAAATTGT+TGG | + | chr8.4:24534079-24534098 | MS.gene46336:CDS | 20.0% |
!!! | AATAATCGTATTTTAGCATT+TGG | + | chr8.4:24537222-24537241 | MS.gene46336:CDS | 20.0% |
!!! | AATTTTGAGATAATTTTGTG+TGG | + | chr8.4:24538362-24538381 | MS.gene46336:intron | 20.0% |
!!! | ACAGGTAAATATTTTTTGTA+TGG | - | chr8.4:24538135-24538154 | None:intergenic | 20.0% |
!!! | AGTCCTTACTTAATTTTAAT+AGG | - | chr8.4:24538119-24538100 | None:intergenic | 20.0% |
!!! | ATAAGCAAATTTTGACTTTT+AGG | - | chr8.4:24539448-24539467 | None:intergenic | 20.0% |
!!! | ATTTTTTTCAGTTTTTTGGT+TGG | - | chr8.4:24535927-24535946 | None:intergenic | 20.0% |
!!! | CTTAAATAATGAAAACGTTT+TGG | - | chr8.4:24538691-24538710 | None:intergenic | 20.0% |
!!! | GTATCATGAACTTAAATTTT+AGG | + | chr8.4:24538865-24538884 | MS.gene46336:intron | 20.0% |
!!! | GTCAATTTTTTTCAGTTTTT+TGG | - | chr8.4:24535931-24535950 | None:intergenic | 20.0% |
!!! | TCTATAGCTTTTAAGAATAT+AGG | - | chr8.4:24534607-24534626 | None:intergenic | 20.0% |
!!! | TCTATTATTGTTTTACAGAT+TGG | + | chr8.4:24539760-24539779 | MS.gene46336:intron | 20.0% |
!!! | TGAACTTTTCATAGTTTATA+TGG | + | chr8.4:24538937-24538956 | MS.gene46336:intron | 20.0% |
!!! | TGTCTTTTTCTTATAAAGTA+AGG | - | chr8.4:24536632-24536651 | None:intergenic | 20.0% |
!!! | TTAAGGGTTAAATATGTTTT+TGG | - | chr8.4:24538575-24538594 | None:intergenic | 20.0% |
!!! | TTAGAAAGTCCTAATTTTAT+AGG | + | chr8.4:24538548-24538567 | MS.gene46336:intron | 20.0% |
!!! | TTTTTTGACAAAGAGAATAA+TGG | - | chr8.4:24538719-24538738 | None:intergenic | 20.0% |
! | AAATTAAAATAAAGCACGTG+GGG | - | chr8.4:24535021-24535040 | None:intergenic | 25.0% |
! | AACAATATATCAGTAACCTT+AGG | - | chr8.4:24534124-24534143 | None:intergenic | 25.0% |
! | AAGATGATAATAAACCACTA+TGG | + | chr8.4:24533951-24533970 | MS.gene46336:CDS | 25.0% |
! | AAGATGATGTAGAGAATAAA+TGG | - | chr8.4:24537300-24537319 | None:intergenic | 25.0% |
! | AATGCATGTAATTAATGTCT+TGG | - | chr8.4:24537860-24537879 | None:intergenic | 25.0% |
! | ACCATAATTAGCAAGTATAT+TGG | - | chr8.4:24537886-24537905 | None:intergenic | 25.0% |
! | ATAGTGGTTTATTATCATCT+TGG | - | chr8.4:24533952-24533971 | None:intergenic | 25.0% |
! | ATATGTTAATTAGAAGGACA+AGG | + | chr8.4:24536918-24536937 | MS.gene46336:intron | 25.0% |
! | ATGCCAATGAAATTTATCAA+AGG | - | chr8.4:24534571-24534590 | None:intergenic | 25.0% |
! | ATGCTTGTCTTTATATTCAT+TGG | - | chr8.4:24534635-24534654 | None:intergenic | 25.0% |
! | ATGTTTGCTCTATAATATAG+TGG | - | chr8.4:24535119-24535138 | None:intergenic | 25.0% |
! | ATTCATACTTAGATAGTGTT+TGG | - | chr8.4:24539673-24539692 | None:intergenic | 25.0% |
! | ATTCCTATCATCAACATTAA+AGG | - | chr8.4:24534281-24534300 | None:intergenic | 25.0% |
! | ATTTAAAGATGTTATCAAGG+AGG | + | chr8.4:24534669-24534688 | MS.gene46336:CDS | 25.0% |
! | CATTCAATTAATGATGTATG+TGG | - | chr8.4:24539423-24539442 | None:intergenic | 25.0% |
! | CCATAATTAGCAAGTATATT+GGG | - | chr8.4:24537885-24537904 | None:intergenic | 25.0% |
! | CTATATTATAGAGCAAACAT+AGG | + | chr8.4:24535119-24535138 | MS.gene46336:intron | 25.0% |
! | CTTCATAATGTGATATACTA+TGG | + | chr8.4:24536820-24536839 | MS.gene46336:intron | 25.0% |
! | GAATAAGAACTAACATAGTA+AGG | - | chr8.4:24534370-24534389 | None:intergenic | 25.0% |
! | TAAGGTTACTGATATATTGT+TGG | + | chr8.4:24534123-24534142 | MS.gene46336:CDS | 25.0% |
! | TAATTCTTTAATCAACTTGC+AGG | + | chr8.4:24535692-24535711 | MS.gene46336:intron | 25.0% |
! | TAGTGGTTTATTATCATCTT+GGG | - | chr8.4:24533951-24533970 | None:intergenic | 25.0% |
! | TCATGTAAAAGATCACATTA+TGG | + | chr8.4:24536145-24536164 | MS.gene46336:CDS | 25.0% |
! | TGAATGAGAAAGTTGTTTAA+TGG | + | chr8.4:24539688-24539707 | MS.gene46336:intron | 25.0% |
! | TTCAACCTATAAAATCTTTG+TGG | + | chr8.4:24534491-24534510 | MS.gene46336:CDS | 25.0% |
! | TTGTTGGATGAAATTCATAT+GGG | - | chr8.4:24539254-24539273 | None:intergenic | 25.0% |
! | TTTGAATAGAATATGTGAAG+AGG | + | chr8.4:24534150-24534169 | MS.gene46336:CDS | 25.0% |
! | TTTGTTGGATGAAATTCATA+TGG | - | chr8.4:24539255-24539274 | None:intergenic | 25.0% |
!! | AATGTCCACAAAGATTTTAT+AGG | - | chr8.4:24534499-24534518 | None:intergenic | 25.0% |
!! | AGTGTTTTATGGAGTAATAA+TGG | - | chr8.4:24534972-24534991 | None:intergenic | 25.0% |
!! | ATAACTTTTCTCTTTTTGTG+TGG | + | chr8.4:24539300-24539319 | MS.gene46336:intron | 25.0% |
!! | TAATCAATTGCAGTGTTTTA+TGG | - | chr8.4:24534983-24535002 | None:intergenic | 25.0% |
!! | TTATTGAAAATTGTTGGTGA+AGG | + | chr8.4:24534085-24534104 | MS.gene46336:CDS | 25.0% |
!!! | AAACAAACTTTGTTTTAGCA+GGG | - | chr8.4:24538167-24538186 | None:intergenic | 25.0% |
!!! | AATCTTGGTTTTATGTTCTA+TGG | + | chr8.4:24535052-24535071 | MS.gene46336:intron | 25.0% |
!!! | AGTTTGTTTTTACAATAGTG+CGG | - | chr8.4:24539645-24539664 | None:intergenic | 25.0% |
!!! | ATCTTGGTTTTATGTTCTAT+GGG | + | chr8.4:24535053-24535072 | MS.gene46336:intron | 25.0% |
!!! | GTTTTTGGTCCTATAAAATT+AGG | - | chr8.4:24538560-24538579 | None:intergenic | 25.0% |
!!! | TAAACAAACTTTGTTTTAGC+AGG | - | chr8.4:24538168-24538187 | None:intergenic | 25.0% |
!!! | TAGGTTTTTCAATTCTTCAA+CGG | - | chr8.4:24535096-24535115 | None:intergenic | 25.0% |
!!! | TAGTTGATAACTTTGAATCT+CGG | - | chr8.4:24537193-24537212 | None:intergenic | 25.0% |
!!! | TTGACAATTTTAGAAGAAGA+AGG | + | chr8.4:24536991-24537010 | MS.gene46336:CDS | 25.0% |
!!! | TTTTGGTTATGTTGTTACTT+TGG | - | chr8.4:24535953-24535972 | None:intergenic | 25.0% |
AAAATCTTTGTGGACATTGA+AGG | + | chr8.4:24534501-24534520 | MS.gene46336:CDS | 30.0% | |
AAAATGTGTGTTTCCCAAAT+TGG | - | chr8.4:24536087-24536106 | None:intergenic | 30.0% | |
AAATCTTTGTGGACATTGAA+GGG | + | chr8.4:24534502-24534521 | MS.gene46336:CDS | 30.0% | |
AAATGTGTGTTTCCCAAATT+GGG | - | chr8.4:24536086-24536105 | None:intergenic | 30.0% | |
AAGAATCTTCACAATCTAAG+AGG | + | chr8.4:24536114-24536133 | MS.gene46336:CDS | 30.0% | |
AAGAGAGAGCTAATATTGAA+AGG | + | chr8.4:24534464-24534483 | MS.gene46336:CDS | 30.0% | |
AATTTCATTGGCATTTGTGA+AGG | + | chr8.4:24534577-24534596 | MS.gene46336:CDS | 30.0% | |
ACTAAAGTTCATTAACCACT+TGG | + | chr8.4:24535653-24535672 | MS.gene46336:intron | 30.0% | |
AGGCCTTTGATAAATTTCAT+TGG | + | chr8.4:24534565-24534584 | MS.gene46336:CDS | 30.0% | |
AGTGGTTTATTATCATCTTG+GGG | - | chr8.4:24533950-24533969 | None:intergenic | 30.0% | |
AGTTACTTCTTACCTTCTTT+AGG | - | chr8.4:24536235-24536254 | None:intergenic | 30.0% | |
ATGCATTAGGAAGTGAAATT+TGG | - | chr8.4:24539563-24539582 | None:intergenic | 30.0% | |
CACTTTCAGTTTCACAATAA+TGG | - | chr8.4:24537065-24537084 | None:intergenic | 30.0% | |
CTAGTAACACTTTCTTCTAT+TGG | - | chr8.4:24533908-24533927 | None:intergenic | 30.0% | |
CTTAGATTGTGAAGATTCTT+GGG | - | chr8.4:24536114-24536133 | None:intergenic | 30.0% | |
GGGCTTAATACAAGTAAAAA+TGG | + | chr8.4:24538886-24538905 | MS.gene46336:intron | 30.0% | |
GTTTCAGTCAAATTTGAACT+CGG | + | chr8.4:24535440-24535459 | MS.gene46336:intron | 30.0% | |
TAAATCATTTGTGAACCAAG+TGG | - | chr8.4:24535671-24535690 | None:intergenic | 30.0% | |
TCAACTGTGTCATGTATTAT+GGG | - | chr8.4:24537499-24537518 | None:intergenic | 30.0% | |
TCTTAGATTGTGAAGATTCT+TGG | - | chr8.4:24536115-24536134 | None:intergenic | 30.0% | |
TTATGGAGTAATAATGGCTT+TGG | - | chr8.4:24534966-24534985 | None:intergenic | 30.0% | |
TTCAAATGAGTCATCTATTG+CGG | + | chr8.4:24537710-24537729 | MS.gene46336:intron | 30.0% | |
TTGCTCTATAATATAGTGGT+AGG | - | chr8.4:24535115-24535134 | None:intergenic | 30.0% | |
TTTAATCAACTTGCAGGAAA+AGG | + | chr8.4:24535698-24535717 | MS.gene46336:intron | 30.0% | |
! | AAGTTGCTGTGAAAAGTTTT+TGG | - | chr8.4:24535970-24535989 | None:intergenic | 30.0% |
! | AATAAAGAGAGGAGTATGAA+GGG | + | chr8.4:24537955-24537974 | MS.gene46336:intron | 30.0% |
! | CCCAATATACTTGCTAATTA+TGG | + | chr8.4:24537882-24537901 | MS.gene46336:intron | 30.0% |
! | GAGTGCAGAAGTTTTTAATA+GGG | + | chr8.4:24538489-24538508 | MS.gene46336:intron | 30.0% |
! | GTTCTTAGAGCATTATAACT+AGG | - | chr8.4:24534430-24534449 | None:intergenic | 30.0% |
! | TAATAAAGAGAGGAGTATGA+AGG | + | chr8.4:24537954-24537973 | MS.gene46336:intron | 30.0% |
! | TATTGTGAAACTGAAAGTGT+TGG | + | chr8.4:24537066-24537085 | MS.gene46336:CDS | 30.0% |
! | TGAGTGCAGAAGTTTTTAAT+AGG | + | chr8.4:24538488-24538507 | MS.gene46336:intron | 30.0% |
! | TTGATATTGACTGTGCAAAA+CGG | - | chr8.4:24535615-24535634 | None:intergenic | 30.0% |
!! | AAGCTAGTATTTAGAGCTTT+TGG | - | chr8.4:24535552-24535571 | None:intergenic | 30.0% |
!! | AAGTGACACTCATTTTGAAA+CGG | + | chr8.4:24536751-24536770 | MS.gene46336:intron | 30.0% |
!! | ATAGCAAGGATGTTTTATTC+TGG | + | chr8.4:24534316-24534335 | MS.gene46336:CDS | 30.0% |
!! | ATGATTTGCACAACATTTTG+TGG | - | chr8.4:24534700-24534719 | None:intergenic | 30.0% |
!! | ATGCCTTTAATGTTGATGAT+AGG | + | chr8.4:24534275-24534294 | MS.gene46336:CDS | 30.0% |
!! | ATTGTGAAACTGAAAGTGTT+GGG | + | chr8.4:24537067-24537086 | MS.gene46336:CDS | 30.0% |
!! | ATTGTTTTACAGATTGGTGA+AGG | + | chr8.4:24539766-24539785 | MS.gene46336:intron | 30.0% |
!! | CGAATGGAGTATCTTTTTAT+TGG | + | chr8.4:24537735-24537754 | MS.gene46336:intron | 30.0% |
!! | TTTGAGATAATTTTGTGTGG+AGG | + | chr8.4:24538365-24538384 | MS.gene46336:intron | 30.0% |
!!! | AGTAAGGATTTTTAGCAAGA+TGG | - | chr8.4:24534354-24534373 | None:intergenic | 30.0% |
!!! | TCTTGGTTTTATGTTCTATG+GGG | + | chr8.4:24535054-24535073 | MS.gene46336:intron | 30.0% |
AAACGACACTCATTAGGAAA+CGG | - | chr8.4:24536540-24536559 | None:intergenic | 35.0% | |
AAAGATGTTATCAAGGAGGT+AGG | + | chr8.4:24534673-24534692 | MS.gene46336:CDS | 35.0% | |
AAATATGGTCAGAGTATGCT+AGG | + | chr8.4:24537672-24537691 | MS.gene46336:intron | 35.0% | |
AAATTGCGTGAGAGAAAAGT+TGG | + | chr8.4:24536670-24536689 | MS.gene46336:intron | 35.0% | |
AAGATGTTATCAAGGAGGTA+GGG | + | chr8.4:24534674-24534693 | MS.gene46336:CDS | 35.0% | |
AATCTTTGTGGACATTGAAG+GGG | + | chr8.4:24534503-24534522 | MS.gene46336:CDS | 35.0% | |
ACAGTGACAAATTTCCATAG+TGG | - | chr8.4:24533968-24533987 | None:intergenic | 35.0% | |
ACTATGGAAATTTGTCACTG+TGG | + | chr8.4:24533967-24533986 | MS.gene46336:CDS | 35.0% | |
ACTCTAAGCGAAACATTCAA+TGG | + | chr8.4:24535861-24535880 | MS.gene46336:CDS | 35.0% | |
AGAAAACGAAGAGAGAAACT+CGG | + | chr8.4:24536173-24536192 | MS.gene46336:CDS | 35.0% | |
AGAAGAAGGAAAGAACACAA+AGG | + | chr8.4:24537005-24537024 | MS.gene46336:CDS | 35.0% | |
AGCTTAGAGAAACTATAGCA+AGG | + | chr8.4:24534302-24534321 | MS.gene46336:CDS | 35.0% | |
ATTGAATGTTTCGCTTAGAG+TGG | - | chr8.4:24535862-24535881 | None:intergenic | 35.0% | |
ATTTCTAAACCCGTCACTAA+TGG | + | chr8.4:24539513-24539532 | MS.gene46336:intron | 35.0% | |
CAAACCCAACAGAGTTATAT+GGG | + | chr8.4:24536030-24536049 | MS.gene46336:CDS | 35.0% | |
CATATAACTCTGTTGGGTTT+GGG | - | chr8.4:24536031-24536050 | None:intergenic | 35.0% | |
CATTGGTAAGACTTAGTCAT+AGG | - | chr8.4:24536788-24536807 | None:intergenic | 35.0% | |
CTCTTGTCTTAGAAAGAGAT+CGG | + | chr8.4:24535373-24535392 | MS.gene46336:intron | 35.0% | |
GGGTGAATACATATTTGATG+AGG | + | chr8.4:24535722-24535741 | MS.gene46336:CDS | 35.0% | |
GTAACACTTTCTTCTATTGG+AGG | - | chr8.4:24533905-24533924 | None:intergenic | 35.0% | |
GTCAACTGTGTCATGTATTA+TGG | - | chr8.4:24537500-24537519 | None:intergenic | 35.0% | |
GTTTCCCATATAACTCTGTT+GGG | - | chr8.4:24536037-24536056 | None:intergenic | 35.0% | |
TACAATCATTGCTGAGGTAA+AGG | + | chr8.4:24537263-24537282 | MS.gene46336:intron | 35.0% | |
TAGTGTAGCTACTAGAAACA+AGG | - | chr8.4:24535190-24535209 | None:intergenic | 35.0% | |
TATCACGTCTAACATGCATT+AGG | - | chr8.4:24539576-24539595 | None:intergenic | 35.0% | |
TCAAAACATTACTAGCTGCT+TGG | + | chr8.4:24536864-24536883 | MS.gene46336:intron | 35.0% | |
TCAAATGAGTCATCTATTGC+GGG | + | chr8.4:24537711-24537730 | MS.gene46336:intron | 35.0% | |
TCAGTTTCACAATAATGGTC+TGG | - | chr8.4:24537060-24537079 | None:intergenic | 35.0% | |
TCTTGTCTTAGAAAGAGATC+GGG | + | chr8.4:24535374-24535393 | MS.gene46336:intron | 35.0% | |
TGTTTCCCATATAACTCTGT+TGG | - | chr8.4:24536038-24536057 | None:intergenic | 35.0% | |
TTCACAATCTAAGAGGTCTT+CGG | + | chr8.4:24536121-24536140 | MS.gene46336:CDS | 35.0% | |
! | AAAGCTTGCAGTGTGTATTT+TGG | - | chr8.4:24538830-24538849 | None:intergenic | 35.0% |
! | AAGCTTGCAGTGTGTATTTT+GGG | - | chr8.4:24538829-24538848 | None:intergenic | 35.0% |
! | ACTTTTGTCAAAAAGAGGTG+AGG | + | chr8.4:24534035-24534054 | MS.gene46336:CDS | 35.0% |
! | ATAAAGAGAGGAGTATGAAG+GGG | + | chr8.4:24537956-24537975 | MS.gene46336:intron | 35.0% |
! | ATGCATTGACATGCGTAATA+GGG | - | chr8.4:24537522-24537541 | None:intergenic | 35.0% |
! | ATTCTGGACGAGTTCTTTTA+AGG | - | chr8.4:24539803-24539822 | None:intergenic | 35.0% |
! | CAGGGAAAAAGATGTTGATT+CGG | + | chr8.4:24537124-24537143 | MS.gene46336:CDS | 35.0% |
! | CTACTCTTTCTTCTCTTTTG+TGG | - | chr8.4:24534247-24534266 | None:intergenic | 35.0% |
! | CTTAGAGCATTATAACTAGG+AGG | - | chr8.4:24534427-24534446 | None:intergenic | 35.0% |
! | GGGTAATTTGTAGTTCAGTT+GGG | + | chr8.4:24535394-24535413 | MS.gene46336:intron | 35.0% |
! | GTGCAACTTTTGTCAAAAAG+AGG | + | chr8.4:24534030-24534049 | MS.gene46336:CDS | 35.0% |
! | TATGCATTGACATGCGTAAT+AGG | - | chr8.4:24537523-24537542 | None:intergenic | 35.0% |
!! | AAACCTTTCTAGTTTCTCTC+TGG | - | chr8.4:24538751-24538770 | None:intergenic | 35.0% |
!! | ATTTTTCCGTATCGACGTAT+CGG | + | chr8.4:24534850-24534869 | MS.gene46336:intron | 35.0% |
!! | GAGTAATAATGGCTTTGGAT+GGG | - | chr8.4:24534961-24534980 | None:intergenic | 35.0% |
!! | GATCTCTTTCTAAGACAAGA+GGG | - | chr8.4:24535374-24535393 | None:intergenic | 35.0% |
!! | TTGTGAAACTGAAAGTGTTG+GGG | + | chr8.4:24537068-24537087 | MS.gene46336:CDS | 35.0% |
AAAGGAAGATCAATCGATGG+TGG | + | chr8.4:24537023-24537042 | MS.gene46336:CDS | 40.0% | |
AAAGTTGGAGAGGGTAAAGT+TGG | + | chr8.4:24536685-24536704 | MS.gene46336:intron | 40.0% | |
AATCAACTTGCAGGAAAAGG+TGG | + | chr8.4:24535701-24535720 | MS.gene46336:intron | 40.0% | |
ACATTACTAGCTGCTTGGTT+AGG | + | chr8.4:24536869-24536888 | MS.gene46336:intron | 40.0% | |
ACGGAGTTTGATGGAAATCA+CGG | - | chr8.4:24535596-24535615 | None:intergenic | 40.0% | |
ACTACTGGTGAGATTTGAGA+CGG | - | chr8.4:24534223-24534242 | None:intergenic | 40.0% | |
AGAGTTTCTCTCACGTAACA+TGG | + | chr8.4:24535782-24535801 | MS.gene46336:CDS | 40.0% | |
ATCAACTTGCAGGAAAAGGT+GGG | + | chr8.4:24535702-24535721 | MS.gene46336:intron | 40.0% | |
ATCTTTGTGGACATTGAAGG+GGG | + | chr8.4:24534504-24534523 | MS.gene46336:CDS | 40.0% | |
CACAAAGGAAGATCAATCGA+TGG | + | chr8.4:24537020-24537039 | MS.gene46336:CDS | 40.0% | |
CAGATTAATGATTCTGCAGG+TGG | + | chr8.4:24533992-24534011 | MS.gene46336:CDS | 40.0% | |
CAGCAATGATTGTAATGTCG+TGG | - | chr8.4:24537257-24537276 | None:intergenic | 40.0% | |
CAGTTAAACCTTGTGACTCA+TGG | + | chr8.4:24535241-24535260 | MS.gene46336:intron | 40.0% | |
CATGTGTGCAACAATCAACA+AGG | - | chr8.4:24536297-24536316 | None:intergenic | 40.0% | |
CCAAACCCAACAGAGTTATA+TGG | + | chr8.4:24536029-24536048 | MS.gene46336:CDS | 40.0% | |
CCATATAACTCTGTTGGGTT+TGG | - | chr8.4:24536032-24536051 | None:intergenic | 40.0% | |
CGACATTACAATCATTGCTG+AGG | + | chr8.4:24537257-24537276 | MS.gene46336:CDS | 40.0% | |
CTGTGTCATGTATTATGGGA+CGG | - | chr8.4:24537495-24537514 | None:intergenic | 40.0% | |
CTTCCAGAGAGAAACTAGAA+AGG | + | chr8.4:24538745-24538764 | MS.gene46336:intron | 40.0% | |
CTTCTTACCTTCTTTAGGTC+AGG | - | chr8.4:24536230-24536249 | None:intergenic | 40.0% | |
CTTGTTAACGAGTGCCTTAT+GGG | + | chr8.4:24537774-24537793 | MS.gene46336:intron | 40.0% | |
GAAATCACGACAAAACGCAT+CGG | - | chr8.4:24535530-24535549 | None:intergenic | 40.0% | |
GAAGGCAATGGAACATGTTT+AGG | - | chr8.4:24534193-24534212 | None:intergenic | 40.0% | |
GAGCATTATAACTAGGAGGA+AGG | - | chr8.4:24534423-24534442 | None:intergenic | 40.0% | |
GATCCACTCGTTGTAAATTG+GGG | + | chr8.4:24537981-24538000 | MS.gene46336:intron | 40.0% | |
GGATCCACTCGTTGTAAATT+GGG | + | chr8.4:24537980-24537999 | MS.gene46336:intron | 40.0% | |
GGTGGAAATGCATTGTTGTA+GGG | - | chr8.4:24535841-24535860 | None:intergenic | 40.0% | |
GTGCAGATTAATGATTCTGC+AGG | + | chr8.4:24533989-24534008 | MS.gene46336:CDS | 40.0% | |
GTTGTCAAAAGACGACTGAA+AGG | - | chr8.4:24536009-24536028 | None:intergenic | 40.0% | |
TCCAAACATGCCATTAGTGA+CGG | - | chr8.4:24539526-24539545 | None:intergenic | 40.0% | |
TCTCTCTTGCTTCAAAAGAG+TGG | - | chr8.4:24534452-24534471 | None:intergenic | 40.0% | |
TCTTGTTAACGAGTGCCTTA+TGG | + | chr8.4:24537773-24537792 | MS.gene46336:intron | 40.0% | |
TCTTTGTTCCTCAAAGGCAA+TGG | - | chr8.4:24535814-24535833 | None:intergenic | 40.0% | |
TGAAGAAAGTGACACGACAT+TGG | - | chr8.4:24536805-24536824 | None:intergenic | 40.0% | |
TGGCTAAAACGACACTCATT+AGG | - | chr8.4:24536546-24536565 | None:intergenic | 40.0% | |
TGGTGGAAATGCATTGTTGT+AGG | - | chr8.4:24535842-24535861 | None:intergenic | 40.0% | |
TTCATTGGCATTTGTGAAGG+AGG | + | chr8.4:24534580-24534599 | MS.gene46336:CDS | 40.0% | |
TTCCTTAATCCGTGTGCAAT+TGG | - | chr8.4:24536566-24536585 | None:intergenic | 40.0% | |
! | AATTGTTGGTGAAGGAGTTC+AGG | + | chr8.4:24534093-24534112 | MS.gene46336:CDS | 40.0% |
! | ATCCATTGCCAAAAGCATGA+TGG | + | chr8.4:24537147-24537166 | MS.gene46336:CDS | 40.0% |
! | ATGTAGCTTTTGCTTTGCCA+TGG | + | chr8.4:24539612-24539631 | MS.gene46336:intron | 40.0% |
! | ATTTGAGACGGTTTAGAGGA+AGG | - | chr8.4:24534211-24534230 | None:intergenic | 40.0% |
! | CAAGAAGTCCATCATGCTTT+TGG | - | chr8.4:24537158-24537177 | None:intergenic | 40.0% |
! | CGGGTAATTTGTAGTTCAGT+TGG | + | chr8.4:24535393-24535412 | MS.gene46336:intron | 40.0% |
! | GTATCGGTATCGTATCGTAT+CGG | + | chr8.4:24534866-24534885 | MS.gene46336:intron | 40.0% |
! | TCAGTGTCATTGCCCAATTT+GGG | + | chr8.4:24536071-24536090 | MS.gene46336:CDS | 40.0% |
! | TGAGATTTGAGACGGTTTAG+AGG | - | chr8.4:24534215-24534234 | None:intergenic | 40.0% |
! | TGATAATGCTCCTGTTTGCA+AGG | + | chr8.4:24534723-24534742 | MS.gene46336:CDS | 40.0% |
! | TGTAGCTTTTGCTTTGCCAT+GGG | + | chr8.4:24539613-24539632 | MS.gene46336:intron | 40.0% |
! | TTAGCAGGGACTAAAAGTAC+AGG | - | chr8.4:24538153-24538172 | None:intergenic | 40.0% |
! | TTCAGTGTCATTGCCCAATT+TGG | + | chr8.4:24536070-24536089 | MS.gene46336:CDS | 40.0% |
!! | ATTTTGGGTGTGGTAGTATG+TGG | - | chr8.4:24538814-24538833 | None:intergenic | 40.0% |
!! | CAGCAGCTTGTTATCTGATT+TGG | + | chr8.4:24535301-24535320 | MS.gene46336:intron | 40.0% |
!! | CGATCTCTTTCTAAGACAAG+AGG | - | chr8.4:24535375-24535394 | None:intergenic | 40.0% |
!! | GCAAGGATGTTTTATTCTGG+TGG | + | chr8.4:24534319-24534338 | MS.gene46336:CDS | 40.0% |
!! | GGAGTAATAATGGCTTTGGA+TGG | - | chr8.4:24534962-24534981 | None:intergenic | 40.0% |
!! | TAGCTTAAAGAGTGCCCATA+AGG | - | chr8.4:24537791-24537810 | None:intergenic | 40.0% |
!! | TCGTTTTAGCCAATTGCACA+CGG | + | chr8.4:24536554-24536573 | MS.gene46336:intron | 40.0% |
!! | TTACATTGGTTTCTGATGGC+TGG | + | chr8.4:24534527-24534546 | MS.gene46336:CDS | 40.0% |
!!! | GACACTCATTTTGAAACGGA+GGG | + | chr8.4:24536755-24536774 | MS.gene46336:intron | 40.0% |
!!! | TGACACTCATTTTGAAACGG+AGG | + | chr8.4:24536754-24536773 | MS.gene46336:intron | 40.0% |
AAAGACGACTGAAAGGTGGA+TGG | - | chr8.4:24536002-24536021 | None:intergenic | 45.0% | |
AAAGCACGTGGGGAAAATCT+TGG | - | chr8.4:24535011-24535030 | None:intergenic | 45.0% | |
AAATGTTAACGAGTGACCCC+GGG | - | chr8.4:24537922-24537941 | None:intergenic | 45.0% | |
AACGCTCTTTAAGCTCTCTG+AGG | - | chr8.4:24536972-24536991 | None:intergenic | 45.0% | |
AAGCTATAACCTTGCCAGCT+CGG | + | chr8.4:24538662-24538681 | MS.gene46336:intron | 45.0% | |
AATAGTGCGGTGAATTCCCA+TGG | - | chr8.4:24539632-24539651 | None:intergenic | 45.0% | |
AATTCCCGATACGATACGTC+TGG | - | chr8.4:24534824-24534843 | None:intergenic | 45.0% | |
ACGATACCGATACGTCGATA+CGG | - | chr8.4:24534859-24534878 | None:intergenic | 45.0% | |
AGGAGTTCAGGTATGTCCTA+AGG | + | chr8.4:24534105-24534124 | MS.gene46336:CDS | 45.0% | |
ATTCCCGATACGATACGTCT+GGG | - | chr8.4:24534823-24534842 | None:intergenic | 45.0% | |
ATTGGGCAATGACACTGAAG+TGG | - | chr8.4:24536069-24536088 | None:intergenic | 45.0% | |
CAGCATCAAGCAAGTTCAAG+TGG | - | chr8.4:24535752-24535771 | None:intergenic | 45.0% | |
CCAAACATGCCATTAGTGAC+GGG | - | chr8.4:24539525-24539544 | None:intergenic | 45.0% | |
CGGATCCACTCGTTGTAAAT+TGG | + | chr8.4:24537979-24537998 | MS.gene46336:intron | 45.0% | |
CGTGAGAGAAAAGTTGGAGA+GGG | + | chr8.4:24536676-24536695 | MS.gene46336:intron | 45.0% | |
CTGTCTGCTGATACGTTCAT+TGG | - | chr8.4:24535284-24535303 | None:intergenic | 45.0% | |
CTGTGCAAAACGGAGTTTGA+TGG | - | chr8.4:24535605-24535624 | None:intergenic | 45.0% | |
GAAATGTTAACGAGTGACCC+CGG | - | chr8.4:24537923-24537942 | None:intergenic | 45.0% | |
GAATGTTTCGCTTAGAGTGG+TGG | - | chr8.4:24535859-24535878 | None:intergenic | 45.0% | |
GACACTCATTAGGAAACGGA+GGG | - | chr8.4:24536536-24536555 | None:intergenic | 45.0% | |
GACATTGAAGGGGGTTACAT+TGG | + | chr8.4:24534513-24534532 | MS.gene46336:CDS | 45.0% | |
GCAAACAGAAAACCAGACAC+AGG | - | chr8.4:24535479-24535498 | None:intergenic | 45.0% | |
GCTCATTCCTGACCTAAAGA+AGG | + | chr8.4:24536220-24536239 | MS.gene46336:CDS | 45.0% | |
GGTCTCTCTTTGTTCCTCAA+AGG | - | chr8.4:24535820-24535839 | None:intergenic | 45.0% | |
GTATCCCAGACGTATCGTAT+CGG | + | chr8.4:24534816-24534835 | MS.gene46336:intron | 45.0% | |
GTCAAAAGACGACTGAAAGG+TGG | - | chr8.4:24536006-24536025 | None:intergenic | 45.0% | |
GTCATGTATTATGGGACGGA+GGG | - | chr8.4:24537491-24537510 | None:intergenic | 45.0% | |
TATCCCAGACGTATCGTATC+GGG | + | chr8.4:24534817-24534836 | MS.gene46336:intron | 45.0% | |
TATGTTCTATGGGGACTGTG+TGG | + | chr8.4:24535063-24535082 | MS.gene46336:intron | 45.0% | |
TGGCATGTTTGGATCAGCAT+TGG | + | chr8.4:24539533-24539552 | MS.gene46336:intron | 45.0% | |
TGTCATGTATTATGGGACGG+AGG | - | chr8.4:24537492-24537511 | None:intergenic | 45.0% | |
TGTCCCCAATTTACAACGAG+TGG | - | chr8.4:24537987-24538006 | None:intergenic | 45.0% | |
! | AGCCAATTGCACACGGATTA+AGG | + | chr8.4:24536561-24536580 | MS.gene46336:intron | 45.0% |
! | CTTCTCTTTTGTGGCACTAC+TGG | - | chr8.4:24534238-24534257 | None:intergenic | 45.0% |
! | GATTTGCTCCATGAGTCACA+AGG | - | chr8.4:24535252-24535271 | None:intergenic | 45.0% |
! | GTATCGTATCGGTATCGTGT+CGG | + | chr8.4:24534877-24534896 | MS.gene46336:intron | 45.0% |
! | GTCCATCATGCTTTTGGCAA+TGG | - | chr8.4:24537152-24537171 | None:intergenic | 45.0% |
! | TATCGTATCGGTATCGTGTC+GGG | + | chr8.4:24534878-24534897 | MS.gene46336:intron | 45.0% |
!! | AGGGTAGAAGCAAAAGTGTC+AGG | + | chr8.4:24537105-24537124 | MS.gene46336:CDS | 45.0% |
!! | GGAGTTCATACTCTAGAGTG+AGG | + | chr8.4:24534056-24534075 | MS.gene46336:CDS | 45.0% |
!! | GGGGTTACATTGGTTTCTGA+TGG | + | chr8.4:24534523-24534542 | MS.gene46336:CDS | 45.0% |
!! | GGGTAGAAGCAAAAGTGTCA+GGG | + | chr8.4:24537106-24537125 | MS.gene46336:CDS | 45.0% |
!! | TGCAGTGTGTATTTTGGGTG+TGG | - | chr8.4:24538824-24538843 | None:intergenic | 45.0% |
!!! | AAACGTTTTGGTTACCGAGC+TGG | - | chr8.4:24538679-24538698 | None:intergenic | 45.0% |
!! | AATTAATCTATAAAAAAAAA+AGG | - | chr8.4:24534929-24534948 | None:intergenic | 5.0% |
AATGTTAACGAGTGACCCCG+GGG | - | chr8.4:24537921-24537940 | None:intergenic | 50.0% | |
ACCAGACACAGGCAAACAAG+AGG | - | chr8.4:24535468-24535487 | None:intergenic | 50.0% | |
ACTCGTCCAGAATCTACGCA+TGG | + | chr8.4:24539810-24539829 | MS.gene46336:CDS | 50.0% | |
ATCGGTATCGTGTCGGGTAT+CGG | + | chr8.4:24534884-24534903 | MS.gene46336:intron | 50.0% | |
ATGCTGCCATGCGTAGATTC+TGG | - | chr8.4:24539819-24539838 | None:intergenic | 50.0% | |
ATGGCTGGACTGATGTGCAA+AGG | + | chr8.4:24534542-24534561 | MS.gene46336:CDS | 50.0% | |
CCCGTCACTAATGGCATGTT+TGG | + | chr8.4:24539522-24539541 | MS.gene46336:intron | 50.0% | |
CGACACTCATTAGGAAACGG+AGG | - | chr8.4:24536537-24536556 | None:intergenic | 50.0% | |
CTGCAGGTGGAAACAAGCTT+TGG | + | chr8.4:24534005-24534024 | MS.gene46336:CDS | 50.0% | |
GACGGTTTAGAGGAAGGCAA+TGG | - | chr8.4:24534205-24534224 | None:intergenic | 50.0% | |
GAGCTCTGCAAGAGCAATGA+AGG | - | chr8.4:24536204-24536223 | None:intergenic | 50.0% | |
GCGTGAGAGAAAAGTTGGAG+AGG | + | chr8.4:24536675-24536694 | MS.gene46336:intron | 50.0% | |
GTCATCTATTGCGGGACGAA+TGG | + | chr8.4:24537719-24537738 | MS.gene46336:intron | 50.0% | |
TGAGCTGTGTGAGAGTCATG+TGG | - | chr8.4:24538616-24538635 | None:intergenic | 50.0% | |
TGGGGATGCTACTGCTATCA+GGG | + | chr8.4:24537086-24537105 | MS.gene46336:CDS | 50.0% | |
TTGGGGATGCTACTGCTATC+AGG | + | chr8.4:24537085-24537104 | MS.gene46336:CDS | 50.0% | |
! | AAGAGAGGAGTATGAAGGGG+CGG | + | chr8.4:24537959-24537978 | MS.gene46336:intron | 50.0% |
! | CAGGTGGAAACAAGCTTTGG+AGG | + | chr8.4:24534008-24534027 | MS.gene46336:CDS | 50.0% |
! | GAACTTGCTTGATGCTGACG+TGG | + | chr8.4:24535755-24535774 | MS.gene46336:CDS | 50.0% |
! | TCCTCTTGTTTGCCTGTGTC+TGG | + | chr8.4:24535464-24535483 | MS.gene46336:intron | 50.0% |
!! | ATGGTCCTTAAAGAGTGCCC+CGG | + | chr8.4:24537901-24537920 | MS.gene46336:intron | 50.0% |
!! | TTTTGGTTACCGAGCTGGCA+AGG | - | chr8.4:24538674-24538693 | None:intergenic | 50.0% |
ATTCCCGCAGCCTTGCAAAC+AGG | - | chr8.4:24534736-24534755 | None:intergenic | 55.0% | |
GCTGCTAATCACAGCCTCAG+TGG | + | chr8.4:24534394-24534413 | MS.gene46336:CDS | 55.0% | |
GCTGGACTGATGTGCAAAGG+AGG | + | chr8.4:24534545-24534564 | MS.gene46336:CDS | 55.0% | |
TAGGAGGAAGGAAGCCACTG+AGG | - | chr8.4:24534411-24534430 | None:intergenic | 55.0% | |
TATGGGGACTGTGTGGCTAG+TGG | + | chr8.4:24535070-24535089 | MS.gene46336:intron | 55.0% | |
TCGGTATCGTGTCGGGTATC+GGG | + | chr8.4:24534885-24534904 | MS.gene46336:intron | 55.0% | |
TGCTCCTGTTTGCAAGGCTG+CGG | + | chr8.4:24534729-24534748 | MS.gene46336:CDS | 55.0% | |
! | GGCTAGTGCCATTGCCTTTG+AGG | + | chr8.4:24535803-24535822 | MS.gene46336:CDS | 55.0% |
!! | TGGTCCTTAAAGAGTGCCCC+GGG | + | chr8.4:24537902-24537921 | MS.gene46336:intron | 55.0% |
GCTCCTGTTTGCAAGGCTGC+GGG | + | chr8.4:24534730-24534749 | MS.gene46336:CDS | 60.0% | |
! | CGGTATCGTGTCGGGTATCG+GGG | + | chr8.4:24534886-24534905 | MS.gene46336:intron | 60.0% |
! | TGACCCCGGGGCACTCTTTA+AGG | - | chr8.4:24537909-24537928 | None:intergenic | 60.0% |
!! | GGTCCTTAAAGAGTGCCCCG+GGG | + | chr8.4:24537903-24537922 | MS.gene46336:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 24533899 | 24539858 | 24533899 | ID=MS.gene46336 |
chr8.4 | mRNA | 24533899 | 24539858 | 24533899 | ID=MS.gene46336.t1;Parent=MS.gene46336 |
chr8.4 | exon | 24533899 | 24534759 | 24533899 | ID=MS.gene46336.t1.exon1;Parent=MS.gene46336.t1 |
chr8.4 | CDS | 24533899 | 24534759 | 24533899 | ID=cds.MS.gene46336.t1;Parent=MS.gene46336.t1 |
chr8.4 | exon | 24535714 | 24536241 | 24535714 | ID=MS.gene46336.t1.exon2;Parent=MS.gene46336.t1 |
chr8.4 | CDS | 24535714 | 24536241 | 24535714 | ID=cds.MS.gene46336.t1;Parent=MS.gene46336.t1 |
chr8.4 | exon | 24536931 | 24537278 | 24536931 | ID=MS.gene46336.t1.exon3;Parent=MS.gene46336.t1 |
chr8.4 | CDS | 24536931 | 24537278 | 24536931 | ID=cds.MS.gene46336.t1;Parent=MS.gene46336.t1 |
chr8.4 | exon | 24539778 | 24539858 | 24539778 | ID=MS.gene46336.t1.exon4;Parent=MS.gene46336.t1 |
chr8.4 | CDS | 24539778 | 24539858 | 24539778 | ID=cds.MS.gene46336.t1;Parent=MS.gene46336.t1 |
Gene Sequence |
Protein sequence |