Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46394.t1 | XP_013457575.1 | 90.4 | 156 | 15 | 0 | 1 | 156 | 1 | 156 | 4.90E-75 | 290.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46394.t1 | Q9STS6 | 60.8 | 79 | 30 | 1 | 2 | 80 | 36 | 113 | 9.1e-22 | 104.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46394.t1 | A0A072UQH1 | 90.4 | 156 | 15 | 0 | 1 | 156 | 1 | 156 | 3.5e-75 | 290.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene46394.t1 | TF | LOB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46394.t1 | MTR_4g099230 | 90.385 | 156 | 15 | 0 | 1 | 156 | 1 | 156 | 2.87e-104 | 295 |
| MS.gene46394.t1 | MTR_5g085390 | 64.925 | 134 | 42 | 1 | 2 | 130 | 9 | 142 | 1.69e-52 | 166 |
| MS.gene46394.t1 | MTR_6g011250 | 50.331 | 151 | 74 | 1 | 2 | 151 | 9 | 159 | 3.86e-48 | 154 |
| MS.gene46394.t1 | MTR_6g011200 | 47.312 | 186 | 56 | 3 | 2 | 146 | 9 | 193 | 5.04e-48 | 155 |
| MS.gene46394.t1 | MTR_6g011230 | 50.993 | 151 | 64 | 3 | 2 | 143 | 11 | 160 | 1.73e-46 | 150 |
| MS.gene46394.t1 | MTR_6g004550 | 67.059 | 85 | 25 | 1 | 30 | 111 | 1 | 85 | 2.73e-34 | 117 |
| MS.gene46394.t1 | MTR_8g017090 | 53.398 | 103 | 47 | 1 | 2 | 104 | 12 | 113 | 5.03e-30 | 110 |
| MS.gene46394.t1 | MTR_4g107450 | 49.057 | 106 | 53 | 1 | 2 | 107 | 10 | 114 | 9.28e-30 | 110 |
| MS.gene46394.t1 | MTR_2g100020 | 48.113 | 106 | 54 | 1 | 2 | 107 | 19 | 123 | 2.62e-28 | 105 |
| MS.gene46394.t1 | MTR_4g105170 | 34.868 | 152 | 91 | 2 | 3 | 154 | 12 | 155 | 6.33e-27 | 100 |
| MS.gene46394.t1 | MTR_8g040900 | 52.500 | 80 | 37 | 1 | 3 | 82 | 8 | 86 | 6.62e-27 | 101 |
| MS.gene46394.t1 | MTR_4g083680 | 33.333 | 141 | 92 | 2 | 3 | 142 | 16 | 155 | 6.32e-26 | 97.1 |
| MS.gene46394.t1 | MTR_7g033800 | 34.459 | 148 | 73 | 4 | 3 | 149 | 12 | 136 | 2.09e-25 | 95.9 |
| MS.gene46394.t1 | MTR_5g017950 | 39.394 | 132 | 75 | 3 | 3 | 130 | 9 | 139 | 2.34e-25 | 99.0 |
| MS.gene46394.t1 | MTR_3g077240 | 44.211 | 95 | 52 | 1 | 3 | 97 | 11 | 104 | 2.39e-25 | 96.3 |
| MS.gene46394.t1 | MTR_2g068760 | 37.838 | 111 | 68 | 1 | 3 | 113 | 14 | 123 | 3.89e-25 | 94.7 |
| MS.gene46394.t1 | MTR_7g028905 | 37.963 | 108 | 66 | 1 | 3 | 110 | 6 | 112 | 3.98e-25 | 93.6 |
| MS.gene46394.t1 | MTR_3g073690 | 43.137 | 102 | 57 | 1 | 3 | 104 | 10 | 110 | 8.63e-25 | 95.1 |
| MS.gene46394.t1 | MTR_6g005070 | 43.158 | 95 | 53 | 1 | 3 | 97 | 10 | 103 | 9.31e-24 | 90.9 |
| MS.gene46394.t1 | MTR_8g079660 | 44.118 | 102 | 56 | 1 | 3 | 104 | 9 | 109 | 4.50e-23 | 92.0 |
| MS.gene46394.t1 | MTR_6g005080 | 41.053 | 95 | 55 | 1 | 3 | 97 | 11 | 104 | 5.63e-23 | 88.6 |
| MS.gene46394.t1 | MTR_3g452660 | 42.157 | 102 | 58 | 1 | 3 | 104 | 8 | 108 | 6.77e-23 | 92.0 |
| MS.gene46394.t1 | MTR_3g031660 | 47.500 | 80 | 41 | 1 | 3 | 82 | 8 | 86 | 7.83e-23 | 89.4 |
| MS.gene46394.t1 | MTR_2g093310 | 37.349 | 166 | 72 | 7 | 3 | 143 | 34 | 192 | 1.11e-22 | 89.4 |
| MS.gene46394.t1 | MTR_5g083010 | 35.385 | 130 | 75 | 3 | 2 | 127 | 11 | 135 | 1.24e-22 | 88.6 |
| MS.gene46394.t1 | MTR_8g079620 | 42.157 | 102 | 58 | 1 | 3 | 104 | 9 | 109 | 3.77e-22 | 89.0 |
| MS.gene46394.t1 | MTR_4g060950 | 45.263 | 95 | 46 | 3 | 3 | 96 | 25 | 114 | 4.20e-22 | 87.8 |
| MS.gene46394.t1 | MTR_5g083230 | 45.000 | 80 | 43 | 1 | 3 | 82 | 7 | 85 | 4.44e-22 | 87.0 |
| MS.gene46394.t1 | MTR_5g083960 | 37.755 | 98 | 60 | 1 | 3 | 100 | 40 | 136 | 1.69e-21 | 86.3 |
| MS.gene46394.t1 | MTR_1g095850 | 39.640 | 111 | 64 | 2 | 3 | 111 | 73 | 182 | 2.95e-21 | 86.3 |
| MS.gene46394.t1 | MTR_5g093010 | 34.314 | 102 | 66 | 1 | 3 | 104 | 6 | 106 | 7.80e-21 | 83.2 |
| MS.gene46394.t1 | MTR_5g075020 | 35.246 | 122 | 78 | 1 | 3 | 124 | 44 | 164 | 3.91e-20 | 83.6 |
| MS.gene46394.t1 | MTR_5g075020 | 35.246 | 122 | 78 | 1 | 3 | 124 | 48 | 168 | 4.37e-20 | 83.6 |
| MS.gene46394.t1 | MTR_3g071420 | 38.144 | 97 | 55 | 2 | 2 | 98 | 14 | 105 | 1.14e-19 | 81.3 |
| MS.gene46394.t1 | MTR_3g071590 | 43.750 | 80 | 44 | 1 | 3 | 82 | 9 | 87 | 1.21e-19 | 80.5 |
| MS.gene46394.t1 | MTR_3g094690 | 38.462 | 104 | 62 | 2 | 3 | 105 | 48 | 150 | 1.66e-19 | 82.0 |
| MS.gene46394.t1 | MTR_8g036105 | 37.391 | 115 | 70 | 2 | 3 | 116 | 19 | 132 | 5.60e-19 | 80.1 |
| MS.gene46394.t1 | MTR_8g036085 | 37.864 | 103 | 62 | 2 | 3 | 104 | 24 | 125 | 9.26e-19 | 79.7 |
| MS.gene46394.t1 | MTR_3g094690 | 37.500 | 104 | 62 | 2 | 3 | 105 | 48 | 149 | 1.36e-18 | 79.3 |
| MS.gene46394.t1 | MTR_7g096530 | 37.500 | 104 | 63 | 2 | 3 | 105 | 15 | 117 | 1.36e-18 | 79.3 |
| MS.gene46394.t1 | MTR_6g027710 | 37.255 | 102 | 62 | 2 | 3 | 103 | 41 | 141 | 3.84e-17 | 75.5 |
| MS.gene46394.t1 | MTR_8g079580 | 39.216 | 102 | 60 | 2 | 3 | 103 | 9 | 109 | 8.36e-17 | 74.7 |
| MS.gene46394.t1 | MTR_7g074990 | 36.000 | 100 | 62 | 2 | 3 | 101 | 21 | 119 | 6.47e-16 | 72.4 |
| MS.gene46394.t1 | MTR_4g088035 | 36.667 | 90 | 56 | 1 | 2 | 91 | 6 | 94 | 7.27e-16 | 72.8 |
| MS.gene46394.t1 | MTR_6g027700 | 34.653 | 101 | 64 | 2 | 1 | 100 | 6 | 105 | 1.83e-15 | 70.9 |
| MS.gene46394.t1 | MTR_8g009730 | 29.012 | 162 | 98 | 5 | 1 | 156 | 9 | 159 | 3.66e-15 | 69.7 |
| MS.gene46394.t1 | MTR_1g070220 | 35.354 | 99 | 62 | 2 | 3 | 100 | 16 | 113 | 3.87e-15 | 69.7 |
| MS.gene46394.t1 | MTR_5g080470 | 30.769 | 104 | 70 | 2 | 2 | 104 | 7 | 109 | 1.37e-14 | 68.2 |
| MS.gene46394.t1 | MTR_1g070205 | 31.313 | 99 | 66 | 2 | 3 | 100 | 13 | 110 | 6.19e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46394.t1 | AT3G47870 | 51.961 | 102 | 48 | 1 | 2 | 103 | 36 | 136 | 7.10e-30 | 111 |
| MS.gene46394.t1 | AT3G13850 | 49.515 | 103 | 51 | 1 | 2 | 104 | 36 | 137 | 9.63e-28 | 104 |
| MS.gene46394.t1 | AT5G63090 | 42.718 | 103 | 58 | 1 | 3 | 105 | 12 | 113 | 2.50e-25 | 95.9 |
| MS.gene46394.t1 | AT5G63090 | 42.718 | 103 | 58 | 1 | 3 | 105 | 12 | 113 | 2.50e-25 | 95.9 |
| MS.gene46394.t1 | AT5G63090 | 42.718 | 103 | 58 | 1 | 3 | 105 | 12 | 113 | 2.50e-25 | 95.9 |
| MS.gene46394.t1 | AT5G63090 | 42.718 | 103 | 58 | 1 | 3 | 105 | 12 | 113 | 2.50e-25 | 95.9 |
| MS.gene46394.t1 | AT1G65620 | 47.500 | 80 | 41 | 1 | 3 | 82 | 10 | 88 | 7.41e-24 | 92.4 |
| MS.gene46394.t1 | AT1G65620 | 47.500 | 80 | 41 | 1 | 3 | 82 | 10 | 88 | 7.41e-24 | 92.4 |
| MS.gene46394.t1 | AT1G65620 | 47.500 | 80 | 41 | 1 | 3 | 82 | 10 | 88 | 7.41e-24 | 92.4 |
| MS.gene46394.t1 | AT1G65620 | 47.500 | 80 | 41 | 1 | 3 | 82 | 10 | 88 | 7.41e-24 | 92.4 |
| MS.gene46394.t1 | AT1G65620 | 47.500 | 80 | 41 | 1 | 3 | 82 | 10 | 88 | 7.41e-24 | 92.4 |
| MS.gene46394.t1 | AT1G31320 | 44.828 | 87 | 47 | 1 | 3 | 89 | 14 | 99 | 7.72e-24 | 91.7 |
| MS.gene46394.t1 | AT5G66870 | 41.176 | 102 | 59 | 1 | 3 | 104 | 8 | 108 | 9.59e-24 | 94.7 |
| MS.gene46394.t1 | AT3G27650 | 42.857 | 98 | 52 | 2 | 3 | 97 | 40 | 136 | 1.81e-23 | 90.5 |
| MS.gene46394.t1 | AT1G72980 | 36.667 | 150 | 88 | 3 | 2 | 151 | 13 | 155 | 5.09e-23 | 90.9 |
| MS.gene46394.t1 | AT3G26660 | 39.216 | 102 | 61 | 1 | 3 | 104 | 6 | 106 | 6.76e-23 | 87.8 |
| MS.gene46394.t1 | AT3G26620 | 39.216 | 102 | 61 | 1 | 3 | 104 | 6 | 106 | 9.56e-23 | 87.4 |
| MS.gene46394.t1 | AT1G07900 | 44.681 | 94 | 47 | 2 | 3 | 96 | 34 | 122 | 2.06e-22 | 88.6 |
| MS.gene46394.t1 | AT2G30130 | 38.136 | 118 | 69 | 3 | 3 | 120 | 9 | 122 | 6.68e-22 | 87.4 |
| MS.gene46394.t1 | AT3G11090 | 40.206 | 97 | 53 | 2 | 2 | 98 | 11 | 102 | 2.66e-21 | 85.1 |
| MS.gene46394.t1 | AT2G28500 | 43.617 | 94 | 48 | 2 | 3 | 96 | 56 | 144 | 4.35e-21 | 85.9 |
| MS.gene46394.t1 | AT2G23660 | 42.553 | 94 | 53 | 1 | 3 | 96 | 6 | 98 | 7.56e-21 | 86.7 |
| MS.gene46394.t1 | AT2G23660 | 42.553 | 94 | 53 | 1 | 3 | 96 | 6 | 98 | 7.56e-21 | 86.7 |
| MS.gene46394.t1 | AT2G23660 | 42.553 | 94 | 53 | 1 | 3 | 96 | 6 | 98 | 7.56e-21 | 86.7 |
| MS.gene46394.t1 | AT1G16530 | 40.741 | 108 | 55 | 3 | 3 | 102 | 15 | 121 | 9.40e-21 | 83.6 |
| MS.gene46394.t1 | AT2G40470 | 38.679 | 106 | 64 | 1 | 3 | 108 | 21 | 125 | 1.91e-20 | 83.6 |
| MS.gene46394.t1 | AT2G40470 | 38.679 | 106 | 64 | 1 | 3 | 108 | 46 | 150 | 3.23e-20 | 83.6 |
| MS.gene46394.t1 | AT2G30340 | 35.294 | 119 | 76 | 1 | 3 | 121 | 54 | 171 | 3.62e-20 | 84.3 |
| MS.gene46394.t1 | AT2G30340 | 35.294 | 119 | 76 | 1 | 3 | 121 | 53 | 170 | 4.39e-20 | 84.0 |
| MS.gene46394.t1 | AT3G50510 | 34.746 | 118 | 75 | 2 | 3 | 119 | 13 | 129 | 1.00e-19 | 81.6 |
| MS.gene46394.t1 | AT3G50510 | 34.746 | 118 | 75 | 2 | 3 | 119 | 13 | 129 | 1.00e-19 | 81.6 |
| MS.gene46394.t1 | AT5G35900 | 36.275 | 102 | 64 | 1 | 3 | 104 | 6 | 106 | 2.50e-19 | 80.9 |
| MS.gene46394.t1 | AT1G06280 | 39.326 | 89 | 53 | 1 | 2 | 90 | 24 | 111 | 5.17e-18 | 77.4 |
| MS.gene46394.t1 | AT5G15060 | 44.595 | 74 | 40 | 1 | 3 | 75 | 18 | 91 | 1.12e-17 | 75.1 |
| MS.gene46394.t1 | AT4G00220 | 36.634 | 101 | 62 | 2 | 5 | 104 | 20 | 119 | 1.64e-16 | 73.9 |
| MS.gene46394.t1 | AT2G45420 | 35.644 | 101 | 63 | 2 | 5 | 104 | 40 | 139 | 4.96e-16 | 73.2 |
| MS.gene46394.t1 | AT2G19820 | 37.363 | 91 | 55 | 1 | 3 | 91 | 13 | 103 | 7.22e-16 | 69.7 |
| MS.gene46394.t1 | AT5G06080 | 30.263 | 152 | 92 | 5 | 2 | 148 | 7 | 149 | 1.45e-15 | 70.5 |
| MS.gene46394.t1 | AT3G03760 | 36.275 | 102 | 63 | 2 | 3 | 103 | 52 | 152 | 3.03e-15 | 71.2 |
| MS.gene46394.t1 | AT2G42430 | 37.500 | 88 | 53 | 2 | 3 | 89 | 16 | 102 | 4.14e-15 | 70.5 |
| MS.gene46394.t1 | AT4G00210 | 32.031 | 128 | 78 | 3 | 3 | 122 | 12 | 138 | 1.19e-14 | 68.9 |
| MS.gene46394.t1 | AT3G58190 | 31.429 | 140 | 78 | 4 | 3 | 139 | 12 | 136 | 1.56e-14 | 68.6 |
| MS.gene46394.t1 | AT2G45410 | 34.545 | 110 | 70 | 2 | 5 | 113 | 19 | 127 | 3.29e-14 | 67.0 |
| MS.gene46394.t1 | AT2G31310 | 34.091 | 88 | 56 | 2 | 3 | 89 | 8 | 94 | 3.91e-13 | 64.3 |
| MS.gene46394.t1 | AT2G42440 | 34.694 | 98 | 59 | 3 | 3 | 96 | 8 | 104 | 1.70e-12 | 63.2 |
Find 22 sgRNAs with CRISPR-Local
Find 25 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCACCAATTGGAGTATT+TGG | 0.086453 | 8.4:+23768968 | None:intergenic |
| TGAGCTTTGGCGAAGATTTC+TGG | 0.170855 | 8.4:+23769250 | None:intergenic |
| GGCGAAGATTTCTGGTTTAT+CGG | 0.252911 | 8.4:+23769258 | None:intergenic |
| GGTTTATCGGCTGGAAAATA+AGG | 0.292366 | 8.4:+23769271 | None:intergenic |
| TAAGGAGCTAAAGCGCAATT+TGG | 0.321462 | 8.4:+23769289 | None:intergenic |
| GCCAAAGCTCATCGTTTGTT+TGG | 0.367005 | 8.4:-23769238 | MS.gene46394:CDS |
| GTATTCAAATTTGCACCAAT+TGG | 0.386142 | 8.4:+23768959 | None:intergenic |
| CAATGGTGGTGTTGATCTAC+AGG | 0.439474 | 8.4:-23768894 | MS.gene46394:CDS |
| CGTGCAAGATTCCCTGCTAC+TGG | 0.446694 | 8.4:-23769124 | MS.gene46394:CDS |
| ACCAAACAAACGATGAGCTT+TGG | 0.449673 | 8.4:+23769237 | None:intergenic |
| GGAAAATGAGAACTAGTAGA+AGG | 0.455012 | 8.4:+23768989 | None:intergenic |
| TTCCCTGCTACTGGATGTCT+TGG | 0.455177 | 8.4:-23769115 | MS.gene46394:CDS |
| AAGATTTCTGGTTTATCGGC+TGG | 0.457749 | 8.4:+23769262 | None:intergenic |
| GCACCAAGACATCCAGTAGC+AGG | 0.478218 | 8.4:+23769112 | None:intergenic |
| CTTTAGCATCTTCACCATGT+TGG | 0.486560 | 8.4:+23769210 | None:intergenic |
| ACAAAGGAAGCACAGTTGAA+TGG | 0.540751 | 8.4:-23768920 | MS.gene46394:CDS |
| CTTGGTGCTATTCTTACATA+CGG | 0.548699 | 8.4:-23769097 | MS.gene46394:CDS |
| TTTGTTTGGTGTTTCCAACA+TGG | 0.590911 | 8.4:-23769224 | MS.gene46394:CDS |
| CACCAAGACATCCAGTAGCA+GGG | 0.617241 | 8.4:+23769113 | None:intergenic |
| GCACAGTTGAATGGTGACAA+TGG | 0.678663 | 8.4:-23768911 | MS.gene46394:CDS |
| AATGGTGGTGTTGATCTACA+GGG | 0.760945 | 8.4:-23768893 | MS.gene46394:CDS |
| CAGTTGAATGGTGACAATGG+TGG | 0.764452 | 8.4:-23768908 | MS.gene46394:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTGAATACAAGTTTTA+TGG | - | chr8.4:23769266-23769285 | MS.gene46394:CDS | 15.0% |
| !!! | AAGTTTTATGGATTCAACAA+AGG | - | chr8.4:23769278-23769297 | MS.gene46394:CDS | 25.0% |
| GTATTCAAATTTGCACCAAT+TGG | + | chr8.4:23769258-23769277 | None:intergenic | 30.0% | |
| ! | CATTTTCCAAATACTCCAAT+TGG | - | chr8.4:23769240-23769259 | MS.gene46394:CDS | 30.0% |
| GGAAAATGAGAACTAGTAGA+AGG | + | chr8.4:23769228-23769247 | None:intergenic | 35.0% | |
| ! | TTTGCACCAATTGGAGTATT+TGG | + | chr8.4:23769249-23769268 | None:intergenic | 35.0% |
| !! | CTTGGTGCTATTCTTACATA+CGG | - | chr8.4:23769117-23769136 | MS.gene46394:CDS | 35.0% |
| !! | TTTGTTTGGTGTTTCCAACA+TGG | - | chr8.4:23768990-23769009 | MS.gene46394:CDS | 35.0% |
| ACCAAACAAACGATGAGCTT+TGG | + | chr8.4:23768980-23768999 | None:intergenic | 40.0% | |
| CTTTAGCATCTTCACCATGT+TGG | + | chr8.4:23769007-23769026 | None:intergenic | 40.0% | |
| TAAGGAGCTAAAGCGCAATT+TGG | + | chr8.4:23768928-23768947 | None:intergenic | 40.0% | |
| ! | ACAAAGGAAGCACAGTTGAA+TGG | - | chr8.4:23769294-23769313 | MS.gene46394:CDS | 40.0% |
| ! | GGTTTATCGGCTGGAAAATA+AGG | + | chr8.4:23768946-23768965 | None:intergenic | 40.0% |
| !! | AAGATTTCTGGTTTATCGGC+TGG | + | chr8.4:23768955-23768974 | None:intergenic | 40.0% |
| !! | AATGGTGGTGTTGATCTACA+GGG | - | chr8.4:23769321-23769340 | MS.gene46394:CDS | 40.0% |
| !! | GGCGAAGATTTCTGGTTTAT+CGG | + | chr8.4:23768959-23768978 | None:intergenic | 40.0% |
| CAGTTGAATGGTGACAATGG+TGG | - | chr8.4:23769306-23769325 | MS.gene46394:CDS | 45.0% | |
| GCACAGTTGAATGGTGACAA+TGG | - | chr8.4:23769303-23769322 | MS.gene46394:CDS | 45.0% | |
| GCCAAAGCTCATCGTTTGTT+TGG | - | chr8.4:23768976-23768995 | MS.gene46394:CDS | 45.0% | |
| ! | TGAGCTTTGGCGAAGATTTC+TGG | + | chr8.4:23768967-23768986 | None:intergenic | 45.0% |
| !! | CAATGGTGGTGTTGATCTAC+AGG | - | chr8.4:23769320-23769339 | MS.gene46394:CDS | 45.0% |
| CACCAAGACATCCAGTAGCA+GGG | + | chr8.4:23769104-23769123 | None:intergenic | 50.0% | |
| TTCCCTGCTACTGGATGTCT+TGG | - | chr8.4:23769099-23769118 | MS.gene46394:CDS | 50.0% | |
| CGTGCAAGATTCCCTGCTAC+TGG | - | chr8.4:23769090-23769109 | MS.gene46394:CDS | 55.0% | |
| GCACCAAGACATCCAGTAGC+AGG | + | chr8.4:23769105-23769124 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 23768883 | 23769353 | 23768883 | ID=MS.gene46394 |
| chr8.4 | mRNA | 23768883 | 23769353 | 23768883 | ID=MS.gene46394.t1;Parent=MS.gene46394 |
| chr8.4 | exon | 23768883 | 23769353 | 23768883 | ID=MS.gene46394.t1.exon1;Parent=MS.gene46394.t1 |
| chr8.4 | CDS | 23768883 | 23769353 | 23768883 | ID=cds.MS.gene46394.t1;Parent=MS.gene46394.t1 |
| Gene Sequence |
| Protein sequence |
