Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46472.t1 | XP_024638206.1 | 94.6 | 314 | 14 | 1 | 1 | 311 | 1 | 314 | 3.20E-158 | 567.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46472.t1 | Q9FG08 | 58.5 | 282 | 111 | 1 | 36 | 311 | 44 | 325 | 1.4e-90 | 334.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46472.t1 | A0A396JSM6 | 94.6 | 314 | 14 | 1 | 1 | 311 | 1 | 314 | 2.3e-158 | 567.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene46472.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46472.t1 | MTR_1g054665 | 96.377 | 276 | 7 | 1 | 1 | 273 | 1 | 276 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46472.t1 | AT5G06620 | 58.947 | 285 | 111 | 1 | 33 | 311 | 41 | 325 | 3.28e-121 | 351 |
| MS.gene46472.t1 | AT5G06620 | 46.821 | 173 | 85 | 2 | 33 | 198 | 41 | 213 | 1.93e-49 | 165 |
Find 89 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGATGGGAGGTGGCTTC+TGG | 0.135824 | 1.4:+45113349 | None:intergenic |
| GGGTTTAAAATTTCCCTTTC+TGG | 0.140471 | 1.4:-45110296 | MS.gene46472:CDS |
| ATCCCAATGCACACATTATA+TGG | 0.261658 | 1.4:-45109042 | MS.gene46472:CDS |
| GGAGGAGAGGTTGGGGAGTC+TGG | 0.287375 | 1.4:+45113188 | None:intergenic |
| GAACTATTGTTTCAAGGTTT+CGG | 0.298888 | 1.4:-45107673 | MS.gene46472:CDS |
| ACAATGGTACATCAATGTTT+TGG | 0.342044 | 1.4:-45109456 | MS.gene46472:CDS |
| AACATTGATGTACCATTGTT+TGG | 0.348129 | 1.4:+45109460 | None:intergenic |
| TTGGATGGGAGGTGGCTTCT+GGG | 0.349084 | 1.4:+45113350 | None:intergenic |
| AGGGTGGCAGACGGCGGGTT+CGG | 0.369692 | 1.4:+45113251 | None:intergenic |
| CTGCTATATTGATGCCAGTC+TGG | 0.385411 | 1.4:-45107713 | MS.gene46472:CDS |
| TATGTCAAGACTGTCACTTC+TGG | 0.385509 | 1.4:+45110237 | None:intergenic |
| CGCGACCCACTGTGTCTGTA+AGG | 0.392626 | 1.4:+45113322 | None:intergenic |
| CGCATTGAGTTGGCTGGTGG+TGG | 0.393454 | 1.4:-45109410 | MS.gene46472:CDS |
| AGCATTTCCAACAGCAGCTT+CGG | 0.399684 | 1.4:+45109343 | None:intergenic |
| ATGAGATCTCCGGTAGGGAT+TGG | 0.413522 | 1.4:+45113282 | None:intergenic |
| TTGGCTTGCATGATCATATC+AGG | 0.415237 | 1.4:-45110265 | MS.gene46472:CDS |
| AATCATCTCAGGTGTCAAAC+TGG | 0.423936 | 1.4:+45110204 | None:intergenic |
| CGGAGAGAACTATTGTTTCA+AGG | 0.423978 | 1.4:-45107679 | MS.gene46472:CDS |
| ACCGCAGTCATGATTATAGA+AGG | 0.432694 | 1.4:+45109304 | None:intergenic |
| TGAGATCTCCGGTAGGGATT+GGG | 0.438167 | 1.4:+45113283 | None:intergenic |
| ATCCATATAATGTGTGCATT+GGG | 0.443622 | 1.4:+45109040 | None:intergenic |
| CCGAGCATCGCGGTCCAGAC+TGG | 0.445983 | 1.4:+45107699 | None:intergenic |
| GCGGCAACGGTGAGAACAAA+AGG | 0.450722 | 1.4:+45113164 | None:intergenic |
| TCCCTTTCTGGTAAAGCGGT+TGG | 0.454495 | 1.4:-45110284 | MS.gene46472:CDS |
| TATCCATATAATGTGTGCAT+TGG | 0.459802 | 1.4:+45109039 | None:intergenic |
| CAAGAGTAACAGACGGGGTG+GGG | 0.468116 | 1.4:+45113216 | None:intergenic |
| GTAACAGACGGGGTGGGGAG+CGG | 0.477249 | 1.4:+45113221 | None:intergenic |
| TAATGCAGTGGCAAAATTGA+AGG | 0.480874 | 1.4:-45109014 | MS.gene46472:CDS |
| GGGTGGGGAGCGGAAGGTGA+AGG | 0.481274 | 1.4:+45113231 | None:intergenic |
| CAATGCATTTCGCATTGAGT+TGG | 0.481923 | 1.4:-45109420 | MS.gene46472:CDS |
| ATGTTGAGATGAAAGCAAAT+TGG | 0.485216 | 1.4:-45111410 | MS.gene46472:CDS |
| GGTGAAGGGTGGCAGACGGC+GGG | 0.490528 | 1.4:+45113246 | None:intergenic |
| GCCAACCGCTTTACCAGAAA+GGG | 0.492202 | 1.4:+45110283 | None:intergenic |
| GGGGAGCGGAAGGTGAAGGG+TGG | 0.498761 | 1.4:+45113235 | None:intergenic |
| CTCACCTCTAAAATCATCTC+AGG | 0.503309 | 1.4:+45110193 | None:intergenic |
| ATCTCAGGTGTCAAACTGGC+AGG | 0.503541 | 1.4:+45110208 | None:intergenic |
| AGCCAACCGCTTTACCAGAA+AGG | 0.512299 | 1.4:+45110282 | None:intergenic |
| CCTGGGTATGAGTGCGGCAA+CGG | 0.512600 | 1.4:+45113151 | None:intergenic |
| GCCCTCCGTGACATTGATGA+AGG | 0.515818 | 1.4:-45108992 | MS.gene46472:intron |
| CTGTGTCTGTAAGGGAGACT+TGG | 0.516340 | 1.4:+45113331 | None:intergenic |
| CAGACGGGGTGGGGAGCGGA+AGG | 0.517375 | 1.4:+45113225 | None:intergenic |
| GTCTGTAAGGGAGACTTGGA+TGG | 0.522858 | 1.4:+45113335 | None:intergenic |
| GATTGGGCGAGTTGCGAAGA+CGG | 0.524161 | 1.4:+45113299 | None:intergenic |
| CGGCAACGGTGAGAACAAAA+GGG | 0.524300 | 1.4:+45113165 | None:intergenic |
| GCATTTCGCATTGAGTTGGC+TGG | 0.527315 | 1.4:-45109416 | MS.gene46472:CDS |
| GCAAGAGTAACAGACGGGGT+GGG | 0.527595 | 1.4:+45113215 | None:intergenic |
| CCAGTCTGGACCGCGATGCT+CGG | 0.532344 | 1.4:-45107699 | MS.gene46472:CDS |
| TGCAATAAGTGCCTTTGTGA+AGG | 0.535808 | 1.4:+45109611 | None:intergenic |
| GTAGAAGCCGAAGCTGCTGT+TGG | 0.536645 | 1.4:-45109350 | MS.gene46472:CDS |
| AGGTGAAGGGTGGCAGACGG+CGG | 0.540257 | 1.4:+45113245 | None:intergenic |
| GGTGGGGAGCGGAAGGTGAA+GGG | 0.543915 | 1.4:+45113232 | None:intergenic |
| ATGAAAATGAGAATGAGAAG+AGG | 0.544556 | 1.4:+45113379 | None:intergenic |
| AGGGAGACTTGGATGGGAGG+TGG | 0.545421 | 1.4:+45113342 | None:intergenic |
| GAGAATGAGAAGAGGTGAAG+TGG | 0.546791 | 1.4:+45113387 | None:intergenic |
| GGCGGTGTGGATGAGATCTC+CGG | 0.553490 | 1.4:+45113272 | None:intergenic |
| GTGGCAGACGGCGGGTTCGG+CGG | 0.556828 | 1.4:+45113254 | None:intergenic |
| GCAACTCGCCCAATCCCTAC+CGG | 0.564096 | 1.4:-45113291 | MS.gene46472:CDS |
| AGAGGTTGGGGAGTCTGGCG+AGG | 0.565084 | 1.4:+45113193 | None:intergenic |
| GGAAGGTGAAGGGTGGCAGA+CGG | 0.565497 | 1.4:+45113242 | None:intergenic |
| AGACGGCGGGTTCGGCGGTG+TGG | 0.568637 | 1.4:+45113259 | None:intergenic |
| GCGAGGCAAGAGTAACAGAC+GGG | 0.569516 | 1.4:+45113210 | None:intergenic |
| GTAAGGGAGACTTGGATGGG+AGG | 0.571978 | 1.4:+45113339 | None:intergenic |
| CCGTTGCCGCACTCATACCC+AGG | 0.574155 | 1.4:-45113151 | MS.gene46472:intron |
| AAGAGGGGTTCAACTTGCTA+AGG | 0.581272 | 1.4:-45109638 | MS.gene46472:CDS |
| GCGACCCACTGTGTCTGTAA+GGG | 0.587365 | 1.4:+45113323 | None:intergenic |
| AATTTCCCTTTCTGGTAAAG+CGG | 0.590443 | 1.4:-45110288 | MS.gene46472:CDS |
| TGAGATGAAAGCAAATTGGA+TGG | 0.592174 | 1.4:-45111406 | MS.gene46472:CDS |
| CAGTCATGATTATAGAAGGA+AGG | 0.596544 | 1.4:+45109308 | None:intergenic |
| GGCAAGAGTAACAGACGGGG+TGG | 0.597153 | 1.4:+45113214 | None:intergenic |
| GGCAACGGTGAGAACAAAAG+GGG | 0.605661 | 1.4:+45113166 | None:intergenic |
| ACCTTCATCAATGTCACGGA+GGG | 0.613577 | 1.4:+45108991 | None:intergenic |
| AATTGTAGCAGGTGCTTGCA+TGG | 0.613839 | 1.4:-45107640 | MS.gene46472:CDS |
| TCTGTAAGGGAGACTTGGAT+GGG | 0.618328 | 1.4:+45113336 | None:intergenic |
| TGTGGATGAGATCTCCGGTA+GGG | 0.624968 | 1.4:+45113277 | None:intergenic |
| GGCGAGGCAAGAGTAACAGA+CGG | 0.631575 | 1.4:+45113209 | None:intergenic |
| GTGTGGATGAGATCTCCGGT+AGG | 0.635646 | 1.4:+45113276 | None:intergenic |
| GTCTCCCTTACAGACACAGT+GGG | 0.636656 | 1.4:-45113327 | MS.gene46472:CDS |
| TTTCGCATTGAGTTGGCTGG+TGG | 0.638184 | 1.4:-45109413 | MS.gene46472:CDS |
| ACAAACCTTCATCAATGTCA+CGG | 0.645369 | 1.4:+45108987 | None:intergenic |
| CACGCACCTGGGTATGAGTG+CGG | 0.671142 | 1.4:+45113145 | None:intergenic |
| GCTAAGGAATGCCTTCACAA+AGG | 0.678500 | 1.4:-45109622 | MS.gene46472:CDS |
| TATATGGATAGATAATGCAG+TGG | 0.693112 | 1.4:-45109026 | MS.gene46472:CDS |
| TCCTTCTATAATCATGACTG+CGG | 0.694740 | 1.4:-45109305 | MS.gene46472:intron |
| TAAAACGTGAAGAAGCTAAG+CGG | 0.700660 | 1.4:+45113415 | None:intergenic |
| GCAACGGTGAGAACAAAAGG+GGG | 0.716047 | 1.4:+45113167 | None:intergenic |
| CGAGGCAAGAGTAACAGACG+GGG | 0.716735 | 1.4:+45113211 | None:intergenic |
| ATAGTTCTCTCCGAGCATCG+CGG | 0.724853 | 1.4:+45107689 | None:intergenic |
| AACCTTCATCAATGTCACGG+AGG | 0.727757 | 1.4:+45108990 | None:intergenic |
| AGTCTCCCTTACAGACACAG+TGG | 0.739651 | 1.4:-45113328 | MS.gene46472:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATTTAATCAAATAAAAT+AGG | + | chr1.4:45112117-45112136 | None:intergenic | 10.0% |
| !!! | TGTTTTTTTCTTTAAATAAT+TGG | - | chr1.4:45108514-45108533 | MS.gene46472:intron | 10.0% |
| !! | AAAAATTTGACTGAAAATTA+AGG | + | chr1.4:45113072-45113091 | None:intergenic | 15.0% |
| !! | AAATAAAATGAATCATCAAA+AGG | - | chr1.4:45109888-45109907 | MS.gene46472:intron | 15.0% |
| !!! | AATTTATTGACTAAATTTGT+TGG | + | chr1.4:45108448-45108467 | None:intergenic | 15.0% |
| !!! | TGAGATTTTGATTTATTTAT+AGG | - | chr1.4:45109629-45109648 | MS.gene46472:CDS | 15.0% |
| !!! | TGAGTTTTTTATTTTAAACT+CGG | + | chr1.4:45108185-45108204 | None:intergenic | 15.0% |
| !! | AAAACATAAAAACACTAACA+AGG | + | chr1.4:45110049-45110068 | None:intergenic | 20.0% |
| !! | AAAAGAAATGGTATAGTTTA+GGG | - | chr1.4:45108755-45108774 | MS.gene46472:intron | 20.0% |
| !! | AAACATAAAAACACTAACAA+GGG | + | chr1.4:45110048-45110067 | None:intergenic | 20.0% |
| !! | AATCAAATAAAATAGGATTG+AGG | + | chr1.4:45112110-45112129 | None:intergenic | 20.0% |
| !! | AGAAAATATGCATTAATTGA+AGG | + | chr1.4:45111057-45111076 | None:intergenic | 20.0% |
| !! | AGATAACAACATTCTATAAT+TGG | + | chr1.4:45112993-45113012 | None:intergenic | 20.0% |
| !! | ATAAAACGTAGAACTTAATT+AGG | - | chr1.4:45113128-45113147 | MS.gene46472:intron | 20.0% |
| !! | ATGATTGATGTTATAAAAGA+TGG | + | chr1.4:45112378-45112397 | None:intergenic | 20.0% |
| !! | CAATAAAACTGTTAAGAAAA+AGG | + | chr1.4:45112434-45112453 | None:intergenic | 20.0% |
| !! | GAAAATATGCATTAATTGAA+GGG | + | chr1.4:45111056-45111075 | None:intergenic | 20.0% |
| !! | GTTTCAGTAATTTATCATTA+GGG | + | chr1.4:45110652-45110671 | None:intergenic | 20.0% |
| !! | TAAATAGTTGTTTATGAAGT+AGG | + | chr1.4:45108544-45108563 | None:intergenic | 20.0% |
| !! | TAACTCATTAATCAAACAAA+TGG | - | chr1.4:45112888-45112907 | MS.gene46472:intron | 20.0% |
| !! | TGATTGATGTTATAAAAGAT+GGG | + | chr1.4:45112377-45112396 | None:intergenic | 20.0% |
| !! | TGTTTCAGTAATTTATCATT+AGG | + | chr1.4:45110653-45110672 | None:intergenic | 20.0% |
| !! | TTCAATTTGAACATCAATAA+TGG | + | chr1.4:45111341-45111360 | None:intergenic | 20.0% |
| !! | TTGATCTTATAGTGTTAAAA+AGG | + | chr1.4:45107969-45107988 | None:intergenic | 20.0% |
| !!! | AATTGTCATTTAGGTAATTT+TGG | + | chr1.4:45110730-45110749 | None:intergenic | 20.0% |
| !!! | AGACTTGTTTAATAAACTAT+AGG | + | chr1.4:45108952-45108971 | None:intergenic | 20.0% |
| !!! | ATTGAAGTTTGATAAAGTTT+TGG | - | chr1.4:45111355-45111374 | MS.gene46472:intron | 20.0% |
| !!! | ATTTTTTGGTTCAAGAATTA+TGG | + | chr1.4:45109867-45109886 | None:intergenic | 20.0% |
| !!! | GTTAAGAAAAAGGTTTTAAA+AGG | + | chr1.4:45112424-45112443 | None:intergenic | 20.0% |
| !!! | TATAAACATCATTTTTCAGA+TGG | - | chr1.4:45111410-45111429 | MS.gene46472:CDS | 20.0% |
| !!! | TTTAAGTTTTAACCAAACAA+TGG | - | chr1.4:45111599-45111618 | MS.gene46472:intron | 20.0% |
| !!! | TTTTCACTTATAATCAATAC+CGG | - | chr1.4:45111189-45111208 | MS.gene46472:intron | 20.0% |
| !!! | TTTTTCCCTTTTAATTTTGT+TGG | - | chr1.4:45112135-45112154 | MS.gene46472:intron | 20.0% |
| ! | AAACAACACTTTATTCACTT+TGG | - | chr1.4:45110126-45110145 | MS.gene46472:intron | 25.0% |
| ! | AAAGAAATGGTATAGTTTAG+GGG | - | chr1.4:45108756-45108775 | MS.gene46472:intron | 25.0% |
| ! | AACAAAATGTTCCTAAAAGA+AGG | + | chr1.4:45111506-45111525 | None:intergenic | 25.0% |
| ! | AACTACAAGTAGAAAATAGA+TGG | + | chr1.4:45109491-45109510 | None:intergenic | 25.0% |
| ! | AATTCAGTGTCAATTTCAAT+AGG | - | chr1.4:45108087-45108106 | MS.gene46472:intron | 25.0% |
| ! | AATTGGATGATTAACTACAT+TGG | + | chr1.4:45112976-45112995 | None:intergenic | 25.0% |
| ! | ATAGTCCATATAAATAGCAA+TGG | - | chr1.4:45108338-45108357 | MS.gene46472:intron | 25.0% |
| ! | ATTGATGCAATATATTAGTC+GGG | + | chr1.4:45112834-45112853 | None:intergenic | 25.0% |
| ! | CAAAAGTAGAAAAATTGTCT+TGG | - | chr1.4:45108818-45108837 | MS.gene46472:intron | 25.0% |
| ! | CATTGATATCATAAACAATG+TGG | + | chr1.4:45109433-45109452 | None:intergenic | 25.0% |
| ! | CATTGATGCAATATATTAGT+CGG | + | chr1.4:45112835-45112854 | None:intergenic | 25.0% |
| ! | CTAAAGAAAAATTCTCATAC+CGG | + | chr1.4:45109707-45109726 | None:intergenic | 25.0% |
| ! | GAAAAGAAATGGTATAGTTT+AGG | - | chr1.4:45108754-45108773 | MS.gene46472:intron | 25.0% |
| ! | GAAATACAATGATTTACAGA+AGG | + | chr1.4:45111304-45111323 | None:intergenic | 25.0% |
| ! | TAAACAGATAAGTGAACTTA+GGG | + | chr1.4:45109918-45109937 | None:intergenic | 25.0% |
| ! | TACTCTCAAATTTATTGAGA+AGG | - | chr1.4:45112766-45112785 | MS.gene46472:intron | 25.0% |
| ! | TAGTAGCTTAATATGTTCTA+TGG | - | chr1.4:45109840-45109859 | MS.gene46472:intron | 25.0% |
| ! | TTAAACAGATAAGTGAACTT+AGG | + | chr1.4:45109919-45109938 | None:intergenic | 25.0% |
| ! | TTAAAGATTATTGAAACCCA+TGG | + | chr1.4:45109742-45109761 | None:intergenic | 25.0% |
| ! | TTAACACTATAAGATCAACA+GGG | - | chr1.4:45107971-45107990 | MS.gene46472:intron | 25.0% |
| ! | TTCTCAAACAAACACAAAAA+GGG | + | chr1.4:45108030-45108049 | None:intergenic | 25.0% |
| ! | TTTAACACTATAAGATCAAC+AGG | - | chr1.4:45107970-45107989 | MS.gene46472:intron | 25.0% |
| ! | TTTCTCAAACAAACACAAAA+AGG | + | chr1.4:45108031-45108050 | None:intergenic | 25.0% |
| !! | CAAGACAATTTTTCTACTTT+TGG | + | chr1.4:45108820-45108839 | None:intergenic | 25.0% |
| !! | TCATTGATACATTTGATAAC+AGG | + | chr1.4:45108295-45108314 | None:intergenic | 25.0% |
| !! | TGCAATTTGAAGAATCATTT+TGG | - | chr1.4:45108387-45108406 | MS.gene46472:intron | 25.0% |
| !! | TTTGGAATATTAACAATGCA+GGG | - | chr1.4:45108405-45108424 | MS.gene46472:intron | 25.0% |
| !!! | AAATCGAAAGTCTTGTTATT+TGG | - | chr1.4:45109043-45109062 | MS.gene46472:CDS | 25.0% |
| !!! | ACTCATTTTTAACACAATGA+TGG | - | chr1.4:45108200-45108219 | MS.gene46472:intron | 25.0% |
| !!! | CATTAATTGAAGGGTATTTT+AGG | + | chr1.4:45111047-45111066 | None:intergenic | 25.0% |
| !!! | CATTATTTCTAACATTCACT+TGG | + | chr1.4:45108244-45108263 | None:intergenic | 25.0% |
| !!! | CTCATTTCATCAGTTTTAAT+GGG | - | chr1.4:45109794-45109813 | MS.gene46472:intron | 25.0% |
| !!! | CTCATTTTTAACACAATGAT+GGG | - | chr1.4:45108201-45108220 | MS.gene46472:intron | 25.0% |
| !!! | GAATTTTCTAATTTAGCTTG+CGG | - | chr1.4:45110182-45110201 | MS.gene46472:intron | 25.0% |
| !!! | GGTAACATTTTAGTAAAAAG+TGG | + | chr1.4:45108882-45108901 | None:intergenic | 25.0% |
| !!! | TATATTTGTTCTGAAAGTGA+AGG | - | chr1.4:45108574-45108593 | MS.gene46472:intron | 25.0% |
| !!! | TCTCATTTCATCAGTTTTAA+TGG | - | chr1.4:45109793-45109812 | MS.gene46472:intron | 25.0% |
| !!! | TGGATTTTAATAACTATTGC+CGG | - | chr1.4:45109685-45109704 | MS.gene46472:intron | 25.0% |
| !!! | TTTTGGAATATTAACAATGC+AGG | - | chr1.4:45108404-45108423 | MS.gene46472:intron | 25.0% |
| AAACAGATAAGTGAACTTAG+GGG | + | chr1.4:45109917-45109936 | None:intergenic | 30.0% | |
| AAACCGATGTTGTCAAATAA+CGG | + | chr1.4:45109369-45109388 | None:intergenic | 30.0% | |
| AAATAACGGCTATAGCATAA+TGG | + | chr1.4:45109355-45109374 | None:intergenic | 30.0% | |
| AAATACTACATGATAAGCTG+AGG | + | chr1.4:45110700-45110719 | None:intergenic | 30.0% | |
| AAATCTCTTTGGTAAATTGC+AGG | - | chr1.4:45113320-45113339 | MS.gene46472:CDS | 30.0% | |
| AAATGAACAATCTCACTCAT+TGG | - | chr1.4:45111998-45112017 | MS.gene46472:intron | 30.0% | |
| AAATTTCAAACCACCAAAAC+AGG | + | chr1.4:45110077-45110096 | None:intergenic | 30.0% | |
| AACATTGATGTACCATTGTT+TGG | + | chr1.4:45111614-45111633 | None:intergenic | 30.0% | |
| AACTACATTGGTATATTGCA+TGG | + | chr1.4:45112964-45112983 | None:intergenic | 30.0% | |
| AATATTTGCCTTCCATGTTT+AGG | - | chr1.4:45111907-45111926 | MS.gene46472:intron | 30.0% | |
| ACACATGCATAAAGAAATCA+TGG | - | chr1.4:45111545-45111564 | MS.gene46472:intron | 30.0% | |
| ACATAAGAGAATGACTATGA+AGG | + | chr1.4:45113103-45113122 | None:intergenic | 30.0% | |
| AGCCAACCAACAAAATTAAA+AGG | + | chr1.4:45112144-45112163 | None:intergenic | 30.0% | |
| ATAAACAGGATTGGGAAATT+CGG | - | chr1.4:45110287-45110306 | MS.gene46472:CDS | 30.0% | |
| ATCCATATAATGTGTGCATT+GGG | + | chr1.4:45112034-45112053 | None:intergenic | 30.0% | |
| ATGAAAATGAGAATGAGAAG+AGG | + | chr1.4:45107695-45107714 | None:intergenic | 30.0% | |
| ATGAGTTTGCAGAAAAGAAA+TGG | - | chr1.4:45108743-45108762 | MS.gene46472:intron | 30.0% | |
| ATGTTGAGATGAAAGCAAAT+TGG | - | chr1.4:45109661-45109680 | MS.gene46472:intron | 30.0% | |
| ATGTTGTTAATTCCAGATAG+TGG | - | chr1.4:45109229-45109248 | MS.gene46472:intron | 30.0% | |
| ATTATATACAGCCCTATGAT+CGG | - | chr1.4:45110618-45110637 | MS.gene46472:intron | 30.0% | |
| ATTGAACATAAAACCTTGAG+AGG | + | chr1.4:45108066-45108085 | None:intergenic | 30.0% | |
| CACGAGTAATGCATAATATA+TGG | - | chr1.4:45109008-45109027 | MS.gene46472:CDS | 30.0% | |
| CATTTCTATTCTCTGACTAA+TGG | - | chr1.4:45108639-45108658 | MS.gene46472:intron | 30.0% | |
| CTTGTGTTAAAAACAAGGTA+AGG | + | chr1.4:45110580-45110599 | None:intergenic | 30.0% | |
| GAACTATTGTTTCAAGGTTT+CGG | - | chr1.4:45113398-45113417 | MS.gene46472:CDS | 30.0% | |
| GCCAACCAACAAAATTAAAA+GGG | + | chr1.4:45112143-45112162 | None:intergenic | 30.0% | |
| GGAATTAAAAGTTAGCTGTA+AGG | - | chr1.4:45112909-45112928 | MS.gene46472:intron | 30.0% | |
| GTGTTCTTGCTAAATAAAGT+TGG | - | chr1.4:45113031-45113050 | MS.gene46472:intron | 30.0% | |
| TACATTACATTTGCATGCAT+AGG | + | chr1.4:45109556-45109575 | None:intergenic | 30.0% | |
| TATAGCGCCCTAAAAAAAAA+GGG | - | chr1.4:45110480-45110499 | MS.gene46472:intron | 30.0% | |
| TATATGGATAGATAATGCAG+TGG | - | chr1.4:45112045-45112064 | MS.gene46472:intron | 30.0% | |
| TATCCATATAATGTGTGCAT+TGG | + | chr1.4:45112035-45112054 | None:intergenic | 30.0% | |
| TCAGATAAAGATCTCATCAT+GGG | - | chr1.4:45110257-45110276 | MS.gene46472:CDS | 30.0% | |
| TCCATATAAATAGCAATGGA+GGG | - | chr1.4:45108342-45108361 | MS.gene46472:intron | 30.0% | |
| TGATCAACAACAAATCTCTT+TGG | - | chr1.4:45113309-45113328 | MS.gene46472:CDS | 30.0% | |
| TGATGTTATAAAAGATGGGT+TGG | + | chr1.4:45112373-45112392 | None:intergenic | 30.0% | |
| TGCAATTTCAACAACCAAAA+TGG | + | chr1.4:45112598-45112617 | None:intergenic | 30.0% | |
| TGTTGAGAGATTACTTATCT+TGG | - | chr1.4:45111573-45111592 | MS.gene46472:intron | 30.0% | |
| TTATTGCTTAGAGTGCAAAA+GGG | + | chr1.4:45110400-45110419 | None:intergenic | 30.0% | |
| TTGGAATATTAACAATGCAG+GGG | - | chr1.4:45108406-45108425 | MS.gene46472:intron | 30.0% | |
| TTTATTGCTTAGAGTGCAAA+AGG | + | chr1.4:45110401-45110420 | None:intergenic | 30.0% | |
| TTTCTTACATTTGCACTAGA+AGG | - | chr1.4:45113213-45113232 | MS.gene46472:CDS | 30.0% | |
| ! | AACTACTATTTTCCACTATC+TGG | + | chr1.4:45109244-45109263 | None:intergenic | 30.0% |
| ! | ACAATGGTACATCAATGTTT+TGG | - | chr1.4:45111615-45111634 | MS.gene46472:intron | 30.0% |
| ! | AGGTTAGGTAATTGTCATTT+AGG | + | chr1.4:45110739-45110758 | None:intergenic | 30.0% |
| ! | ATGGGACTAATTTTTCTCTT+TGG | - | chr1.4:45109812-45109831 | MS.gene46472:intron | 30.0% |
| ! | ATTACCTAACCTCTTTTCAA+AGG | - | chr1.4:45110747-45110766 | MS.gene46472:intron | 30.0% |
| ! | ATTGCTTGTATCCTTCTTTT+AGG | - | chr1.4:45111492-45111511 | MS.gene46472:intron | 30.0% |
| ! | CAATGACTCTTTTATTCTCA+TGG | - | chr1.4:45111081-45111100 | MS.gene46472:intron | 30.0% |
| ! | CATGTTTTATCACCAAAATC+TGG | - | chr1.4:45112271-45112290 | MS.gene46472:intron | 30.0% |
| ! | GATGTTATAAAAGATGGGTT+GGG | + | chr1.4:45112372-45112391 | None:intergenic | 30.0% |
| ! | TACATTTTGAATCATGCAAG+AGG | + | chr1.4:45109766-45109785 | None:intergenic | 30.0% |
| ! | TAGAACAAAGTGTCAAACAT+CGG | + | chr1.4:45109294-45109313 | None:intergenic | 30.0% |
| ! | TGTTGATCAACGATAGTTTT+AGG | + | chr1.4:45113298-45113317 | None:intergenic | 30.0% |
| ! | TTGGTGATAAAACATGGTAT+AGG | + | chr1.4:45112267-45112286 | None:intergenic | 30.0% |
| ! | TTTTCATCTACCCTTTTTCT+CGG | - | chr1.4:45111243-45111262 | MS.gene46472:intron | 30.0% |
| !! | AGTTGAATGCTTTGTTTGTT+GGG | - | chr1.4:45110365-45110384 | MS.gene46472:intron | 30.0% |
| !! | ATCATTTTTCAGATGGAAGA+GGG | - | chr1.4:45111417-45111436 | MS.gene46472:CDS | 30.0% |
| !! | CAGATTTTGGTGATAAAACA+TGG | + | chr1.4:45112273-45112292 | None:intergenic | 30.0% |
| !!! | ATTGAAGGGTATTTTAGGAT+AGG | + | chr1.4:45111042-45111061 | None:intergenic | 30.0% |
| !!! | CTCTTGTTTTGTTATTTCTC+AGG | + | chr1.4:45109199-45109218 | None:intergenic | 30.0% |
| !!! | TACCTTGTTTTTAACACAAG+AGG | - | chr1.4:45110580-45110599 | MS.gene46472:intron | 30.0% |
| !!! | TCCCTTTTAATTTTGTTGGT+TGG | - | chr1.4:45112139-45112158 | MS.gene46472:intron | 30.0% |
| AAAACCATTTGCTTATCCCT+TGG | - | chr1.4:45112686-45112705 | MS.gene46472:intron | 35.0% | |
| AAATTGCATCCTTGAAAGGT+TGG | - | chr1.4:45112610-45112629 | MS.gene46472:intron | 35.0% | |
| AACTAATCACCCCAAACTTA+GGG | - | chr1.4:45109157-45109176 | MS.gene46472:intron | 35.0% | |
| AAGATTATGCCAACCTTTCA+AGG | + | chr1.4:45112622-45112641 | None:intergenic | 35.0% | |
| ACAAACCTTCATCAATGTCA+CGG | + | chr1.4:45112087-45112106 | None:intergenic | 35.0% | |
| AGAGTAGAAGAAACGCATAT+GGG | + | chr1.4:45112752-45112771 | None:intergenic | 35.0% | |
| AGCCTCTTGTGTTAAAAACA+AGG | + | chr1.4:45110585-45110604 | None:intergenic | 35.0% | |
| AGTGAGATTGTTCATTTCTC+AGG | + | chr1.4:45111995-45112014 | None:intergenic | 35.0% | |
| AGTTTCTGCAACTTAATGGA+AGG | - | chr1.4:45112233-45112252 | MS.gene46472:intron | 35.0% | |
| ATAGAAATGCATCCTAGCTT+TGG | + | chr1.4:45108628-45108647 | None:intergenic | 35.0% | |
| ATCCCAATGCACACATTATA+TGG | - | chr1.4:45112029-45112048 | MS.gene46472:intron | 35.0% | |
| ATGGAACAACTTCTCATGAA+GGG | - | chr1.4:45111100-45111119 | MS.gene46472:intron | 35.0% | |
| ATTGGTTAAGCAGCTAAAAG+AGG | + | chr1.4:45108903-45108922 | None:intergenic | 35.0% | |
| CAAATGCAAGTAGTCAAAGA+AGG | - | chr1.4:45110158-45110177 | MS.gene46472:intron | 35.0% | |
| CAGATAAAGATCTCATCATG+GGG | - | chr1.4:45110258-45110277 | MS.gene46472:CDS | 35.0% | |
| CAGTCATGATTATAGAAGGA+AGG | + | chr1.4:45111766-45111785 | None:intergenic | 35.0% | |
| CATGTACCAAACAACACTAT+AGG | + | chr1.4:45112482-45112501 | None:intergenic | 35.0% | |
| CTCAGATAAAGATCTCATCA+TGG | - | chr1.4:45110256-45110275 | MS.gene46472:CDS | 35.0% | |
| CTTATCTGTTTAACAGTGTC+AGG | - | chr1.4:45109926-45109945 | MS.gene46472:intron | 35.0% | |
| GAATCATTGAGAACTACTAG+TGG | + | chr1.4:45111008-45111027 | None:intergenic | 35.0% | |
| GTATAGCGCCCTAAAAAAAA+AGG | - | chr1.4:45110479-45110498 | MS.gene46472:intron | 35.0% | |
| GTCCATATAAATAGCAATGG+AGG | - | chr1.4:45108341-45108360 | MS.gene46472:intron | 35.0% | |
| GTGAGATTGTTCATTTCTCA+GGG | + | chr1.4:45111994-45112013 | None:intergenic | 35.0% | |
| GTTGAAATTGCATCCTTGAA+AGG | - | chr1.4:45112606-45112625 | MS.gene46472:intron | 35.0% | |
| TAAAACGTGAAGAAGCTAAG+CGG | + | chr1.4:45107659-45107678 | None:intergenic | 35.0% | |
| TAAACAGGATTGGGAAATTC+GGG | - | chr1.4:45110288-45110307 | MS.gene46472:CDS | 35.0% | |
| TAAAGCACAGTTGTCTTAAC+TGG | - | chr1.4:45111866-45111885 | MS.gene46472:intron | 35.0% | |
| TAATGCAGTGGCAAAATTGA+AGG | - | chr1.4:45112057-45112076 | MS.gene46472:intron | 35.0% | |
| TAATTATACCGACCTCACAT+TGG | + | chr1.4:45109409-45109428 | None:intergenic | 35.0% | |
| TAGCCGTTATTTGACAACAT+CGG | - | chr1.4:45109363-45109382 | MS.gene46472:CDS | 35.0% | |
| TATTGCTTAGAGTGCAAAAG+GGG | + | chr1.4:45110399-45110418 | None:intergenic | 35.0% | |
| TCACTTATAATCAATACCGG+AGG | - | chr1.4:45111192-45111211 | MS.gene46472:intron | 35.0% | |
| TCCTTCTATAATCATGACTG+CGG | - | chr1.4:45111766-45111785 | MS.gene46472:intron | 35.0% | |
| TCTCAGGGTTAAAAATGACA+AGG | + | chr1.4:45111979-45111998 | None:intergenic | 35.0% | |
| TGACAGTTTCTGCAACTTAA+TGG | - | chr1.4:45112229-45112248 | MS.gene46472:intron | 35.0% | |
| TGAGATGAAAGCAAATTGGA+TGG | - | chr1.4:45109665-45109684 | MS.gene46472:intron | 35.0% | |
| TGTGAAAGTTCCCTAAGTTT+GGG | + | chr1.4:45109170-45109189 | None:intergenic | 35.0% | |
| TGTTTAACAGTGTCAGGTTT+GGG | - | chr1.4:45109932-45109951 | MS.gene46472:intron | 35.0% | |
| TTACTATAAGATAGCAGACC+TGG | - | chr1.4:45113241-45113260 | MS.gene46472:CDS | 35.0% | |
| TTAGCATCTTCAATTGCCAT+GGG | - | chr1.4:45109723-45109742 | MS.gene46472:intron | 35.0% | |
| TTCCTTCGAAAACTAATGAG+TGG | + | chr1.4:45111276-45111295 | None:intergenic | 35.0% | |
| TTCGAAAACTAATGAGTGGT+AGG | + | chr1.4:45111272-45111291 | None:intergenic | 35.0% | |
| TTGTGAAAGTTCCCTAAGTT+TGG | + | chr1.4:45109171-45109190 | None:intergenic | 35.0% | |
| TTTAGCATCTTCAATTGCCA+TGG | - | chr1.4:45109722-45109741 | MS.gene46472:intron | 35.0% | |
| ! | AACAAGAGCATATGAAAGCA+TGG | + | chr1.4:45109076-45109095 | None:intergenic | 35.0% |
| ! | AATTTCCCTTTCTGGTAAAG+CGG | - | chr1.4:45110783-45110802 | MS.gene46472:intron | 35.0% |
| ! | ATTGAGAACTACTAGTGGAT+TGG | + | chr1.4:45111003-45111022 | None:intergenic | 35.0% |
| ! | GAAAGGGAAATTTTAAACCC+CGG | + | chr1.4:45110775-45110794 | None:intergenic | 35.0% |
| ! | GGGTTTAAAATTTCCCTTTC+TGG | - | chr1.4:45110775-45110794 | MS.gene46472:intron | 35.0% |
| ! | GGTTGGTTATAAACAGGATT+GGG | - | chr1.4:45110279-45110298 | MS.gene46472:CDS | 35.0% |
| ! | GTTTTCAATGCAATTGTAGC+AGG | - | chr1.4:45113420-45113439 | MS.gene46472:CDS | 35.0% |
| ! | TAACCTCTTTTCAAAGGAAC+CGG | - | chr1.4:45110753-45110772 | MS.gene46472:intron | 35.0% |
| ! | TATGTTTTCGTTGCCTGTTT+TGG | - | chr1.4:45110061-45110080 | MS.gene46472:intron | 35.0% |
| ! | TCATTGAATGCACTACGTTT+TGG | + | chr1.4:45112170-45112189 | None:intergenic | 35.0% |
| !! | ATCGGTTTTCCAAACATGAA+GGG | - | chr1.4:45109381-45109400 | MS.gene46472:CDS | 35.0% |
| !! | ATTGAACACCTTGGATTAGT+CGG | - | chr1.4:45108154-45108173 | MS.gene46472:intron | 35.0% |
| !! | CATCATTTTTCAGATGGAAG+AGG | - | chr1.4:45111416-45111435 | MS.gene46472:CDS | 35.0% |
| !! | CTTTATTCACTTTGGTTCTC+TGG | - | chr1.4:45110134-45110153 | MS.gene46472:intron | 35.0% |
| !! | GAGTTGAATGCTTTGTTTGT+TGG | - | chr1.4:45110364-45110383 | MS.gene46472:intron | 35.0% |
| !! | TCATTTTTCAGATGGAAGAG+GGG | - | chr1.4:45111418-45111437 | MS.gene46472:CDS | 35.0% |
| !! | TCCCTCCATTGCTATTTATA+TGG | + | chr1.4:45108346-45108365 | None:intergenic | 35.0% |
| !!! | TACCACTCATTAGTTTTCGA+AGG | - | chr1.4:45111271-45111290 | MS.gene46472:intron | 35.0% |
| !!! | TTTTCTAATTTAGCTTGCGG+TGG | - | chr1.4:45110185-45110204 | MS.gene46472:intron | 35.0% |
| AAAAAAAAAACGCACGCACC+TGG | + | chr1.4:45107941-45107960 | None:intergenic | 40.0% | |
| AAAAAAAAACGCACGCACCT+GGG | + | chr1.4:45107940-45107959 | None:intergenic | 40.0% | |
| AATCATCTCAGGTGTCAAAC+TGG | + | chr1.4:45110870-45110889 | None:intergenic | 40.0% | |
| AATCTCATTGTCCACTTGTG+GGG | + | chr1.4:45108137-45108156 | None:intergenic | 40.0% | |
| ACATTGGAACCCTTCATGTT+TGG | + | chr1.4:45109393-45109412 | None:intergenic | 40.0% | |
| ACCGCAGTCATGATTATAGA+AGG | + | chr1.4:45111770-45111789 | None:intergenic | 40.0% | |
| ACCTATTACGCAATCACCAA+GGG | + | chr1.4:45112705-45112724 | None:intergenic | 40.0% | |
| ATCACCAAGGGATAAGCAAA+TGG | + | chr1.4:45112693-45112712 | None:intergenic | 40.0% | |
| ATCCTCTTCTATCCAGGTTA+TGG | + | chr1.4:45112298-45112317 | None:intergenic | 40.0% | |
| CAATCTCATTGTCCACTTGT+GGG | + | chr1.4:45108138-45108157 | None:intergenic | 40.0% | |
| CAATGCATTTCGCATTGAGT+TGG | - | chr1.4:45111651-45111670 | MS.gene46472:intron | 40.0% | |
| CATGGAACAACTTCTCATGA+AGG | - | chr1.4:45111099-45111118 | MS.gene46472:intron | 40.0% | |
| CGGAGAGAACTATTGTTTCA+AGG | - | chr1.4:45113392-45113411 | MS.gene46472:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr1.4:45110554-45110573 | None:intergenic | 40.0% | |
| CTGTTTAACAGTGTCAGGTT+TGG | - | chr1.4:45109931-45109950 | MS.gene46472:intron | 40.0% | |
| GAACTAATCACCCCAAACTT+AGG | - | chr1.4:45109156-45109175 | MS.gene46472:intron | 40.0% | |
| GACAATGAGATTGAACACCT+TGG | - | chr1.4:45108145-45108164 | MS.gene46472:intron | 40.0% | |
| GAGAGTAGAAGAAACGCATA+TGG | + | chr1.4:45112753-45112772 | None:intergenic | 40.0% | |
| GATGCAATATATTAGTCGGG+CGG | + | chr1.4:45112831-45112850 | None:intergenic | 40.0% | |
| GGGCTGTATATAATAATCCC+TGG | + | chr1.4:45110612-45110631 | None:intergenic | 40.0% | |
| GTCTGATTCAGACATTACAG+TGG | - | chr1.4:45109978-45109997 | MS.gene46472:intron | 40.0% | |
| GTGAAAGTTCCCTAAGTTTG+GGG | + | chr1.4:45109169-45109188 | None:intergenic | 40.0% | |
| GTTAGCTGTAAGGAGCTTAA+AGG | - | chr1.4:45112919-45112938 | MS.gene46472:intron | 40.0% | |
| TAAAGATCTCATCATGGGGT+TGG | - | chr1.4:45110262-45110281 | MS.gene46472:CDS | 40.0% | |
| TAGAAGAGGATGCTTGTCTT+AGG | - | chr1.4:45112307-45112326 | MS.gene46472:intron | 40.0% | |
| TATAAGATAGCAGACCTGGA+TGG | - | chr1.4:45113245-45113264 | MS.gene46472:CDS | 40.0% | |
| TATAGAGTTGTCTATGCGTG+TGG | + | chr1.4:45111956-45111975 | None:intergenic | 40.0% | |
| TCAATCTCATTGTCCACTTG+TGG | + | chr1.4:45108139-45108158 | None:intergenic | 40.0% | |
| TGAGAAGGAAATGCTTGTGA+CGG | - | chr1.4:45112781-45112800 | MS.gene46472:intron | 40.0% | |
| TGCAATAAGTGCCTTTGTGA+AGG | + | chr1.4:45111463-45111482 | None:intergenic | 40.0% | |
| TGGACAAACAATACTTCCTC+CGG | + | chr1.4:45111211-45111230 | None:intergenic | 40.0% | |
| ! | AACCTCTTTTCAAAGGAACC+GGG | - | chr1.4:45110754-45110773 | MS.gene46472:intron | 40.0% |
| ! | ACGAAGCCTATAGTGTTGTT+TGG | - | chr1.4:45112473-45112492 | MS.gene46472:intron | 40.0% |
| ! | ATATCTGACTTGTGAAGCTG+TGG | - | chr1.4:45109462-45109481 | MS.gene46472:CDS | 40.0% |
| ! | ATGTTAGAGCTTTAGTGCAC+TGG | + | chr1.4:45110510-45110529 | None:intergenic | 40.0% |
| ! | GACACCTGAGATGATTTTAG+AGG | - | chr1.4:45110874-45110893 | MS.gene46472:intron | 40.0% |
| ! | GCTAAGTCCATAGCCTTAAA+TGG | - | chr1.4:45108109-45108128 | MS.gene46472:intron | 40.0% |
| ! | GGTTCCTTTGAAAAGAGGTT+AGG | + | chr1.4:45110754-45110773 | None:intergenic | 40.0% |
| ! | TATGTCAAGACTGTCACTTC+TGG | + | chr1.4:45110837-45110856 | None:intergenic | 40.0% |
| ! | TCTATGCGTGTGGAATTTTC+TGG | + | chr1.4:45111946-45111965 | None:intergenic | 40.0% |
| !! | CTCACCTCTAAAATCATCTC+AGG | + | chr1.4:45110881-45110900 | None:intergenic | 40.0% |
| !! | GATGAAAAGTGCTTGCTAGT+TGG | + | chr1.4:45111231-45111250 | None:intergenic | 40.0% |
| !! | GGGTTGGTTATAAACAGGAT+TGG | - | chr1.4:45110278-45110297 | MS.gene46472:CDS | 40.0% |
| !! | TAAAAGATGGGTTGGGACAA+AGG | + | chr1.4:45112365-45112384 | None:intergenic | 40.0% |
| !! | TCATGGGGTTGGTTATAAAC+AGG | - | chr1.4:45110273-45110292 | MS.gene46472:CDS | 40.0% |
| !! | TTGGCTTGCATGATCATATC+AGG | - | chr1.4:45110806-45110825 | MS.gene46472:intron | 40.0% |
| !!! | CATCGGTTTTCCAAACATGA+AGG | - | chr1.4:45109380-45109399 | MS.gene46472:CDS | 40.0% |
| !!! | TGGCCTGCCCTTTTTTTTTA+GGG | + | chr1.4:45110490-45110509 | None:intergenic | 40.0% |
| AAATGTCACGTGCCAAAGCT+AGG | - | chr1.4:45108613-45108632 | MS.gene46472:intron | 45.0% | |
| AACCTTCATCAATGTCACGG+AGG | + | chr1.4:45112084-45112103 | None:intergenic | 45.0% | |
| AATTGTAGCAGGTGCTTGCA+TGG | - | chr1.4:45113431-45113450 | MS.gene46472:CDS | 45.0% | |
| ACAAGCATCCTCTTCTATCC+AGG | + | chr1.4:45112304-45112323 | None:intergenic | 45.0% | |
| ACATGAAGGGTTCCAATGTG+AGG | - | chr1.4:45109394-45109413 | MS.gene46472:CDS | 45.0% | |
| ACCTTCATCAATGTCACGGA+GGG | + | chr1.4:45112083-45112102 | None:intergenic | 45.0% | |
| AGCATTTCCAACAGCAGCTT+CGG | + | chr1.4:45111731-45111750 | None:intergenic | 45.0% | |
| AGCGTAACGAACCCAAAGAT+TGG | + | chr1.4:45112553-45112572 | None:intergenic | 45.0% | |
| ATATATTAGTCGGGCGGATC+TGG | + | chr1.4:45112825-45112844 | None:intergenic | 45.0% | |
| ATTCCTTAACCAGTGCCTAG+GGG | + | chr1.4:45108797-45108816 | None:intergenic | 45.0% | |
| CACCTATTACGCAATCACCA+AGG | + | chr1.4:45112706-45112725 | None:intergenic | 45.0% | |
| CCAAAATCTGGTCCATAACC+TGG | - | chr1.4:45112283-45112302 | MS.gene46472:intron | 45.0% | |
| CTGCTATATTGATGCCAGTC+TGG | - | chr1.4:45113358-45113377 | MS.gene46472:CDS | 45.0% | |
| GAGAATGAGAAGAGGTGAAG+TGG | + | chr1.4:45107687-45107706 | None:intergenic | 45.0% | |
| GATTCCTTAACCAGTGCCTA+GGG | + | chr1.4:45108798-45108817 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr1.4:45110555-45110574 | None:intergenic | 45.0% | |
| GCTAAGGAATGCCTTCACAA+AGG | - | chr1.4:45111449-45111468 | MS.gene46472:intron | 45.0% | |
| GCTCTTTATGCCAAGCTTGA+GGG | - | chr1.4:45112570-45112589 | MS.gene46472:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr1.4:45110558-45110577 | None:intergenic | 45.0% | |
| GTCCATAACCTGGATAGAAG+AGG | - | chr1.4:45112293-45112312 | MS.gene46472:intron | 45.0% | |
| GTGCTTTGCTGCCAATCTTT+GGG | - | chr1.4:45112539-45112558 | MS.gene46472:intron | 45.0% | |
| TAGCTGCTTAACCAATGCTC+CGG | - | chr1.4:45108907-45108926 | MS.gene46472:intron | 45.0% | |
| TCTGTAAGGGAGACTTGGAT+GGG | + | chr1.4:45107738-45107757 | None:intergenic | 45.0% | |
| TGGTAGGCATCCGAGAAAAA+GGG | + | chr1.4:45111256-45111275 | None:intergenic | 45.0% | |
| ! | AACACAAGAGGCTGTTTCCA+GGG | - | chr1.4:45110592-45110611 | MS.gene46472:intron | 45.0% |
| ! | ACCTCTTTTCAAAGGAACCG+GGG | - | chr1.4:45110755-45110774 | MS.gene46472:intron | 45.0% |
| ! | CCAGGTTATGGACCAGATTT+TGG | + | chr1.4:45112286-45112305 | None:intergenic | 45.0% |
| ! | CTTGGTGATTGCGTAATAGG+TGG | - | chr1.4:45112704-45112723 | MS.gene46472:intron | 45.0% |
| ! | TAACACAAGAGGCTGTTTCC+AGG | - | chr1.4:45110591-45110610 | MS.gene46472:intron | 45.0% |
| ! | TCCCTTGGTGATTGCGTAAT+AGG | - | chr1.4:45112701-45112720 | MS.gene46472:intron | 45.0% |
| !! | AAGAGGGGTTCAACTTGCTA+AGG | - | chr1.4:45111433-45111452 | MS.gene46472:intron | 45.0% |
| !! | GAACTACTAGTGGATTGGAG+AGG | + | chr1.4:45110998-45111017 | None:intergenic | 45.0% |
| !! | GTGTGCAATTTGCTGATTGG+TGG | - | chr1.4:45110310-45110329 | MS.gene46472:intron | 45.0% |
| !! | GTTTTCGTTGCCTGTTTTGG+TGG | - | chr1.4:45110064-45110083 | MS.gene46472:intron | 45.0% |
| !! | TAATTTAGCTTGCGGTGGTG+TGG | - | chr1.4:45110190-45110209 | MS.gene46472:intron | 45.0% |
| !! | TGTGGTGTCTCTGAGATGTA+AGG | - | chr1.4:45110208-45110227 | MS.gene46472:CDS | 45.0% |
| !!! | CTGGCCTGCCCTTTTTTTTT+AGG | + | chr1.4:45110491-45110510 | None:intergenic | 45.0% |
| !!! | ATTCATTTTATTTTATTTTT+TGG | + | chr1.4:45109881-45109900 | None:intergenic | 5.0% |
| AGAATGTTAACCAGTGCCCC+CGG | + | chr1.4:45108929-45108948 | None:intergenic | 50.0% | |
| AGCCAACCGCTTTACCAGAA+AGG | + | chr1.4:45110792-45110811 | None:intergenic | 50.0% | |
| AGCTGCTTAACCAATGCTCC+GGG | - | chr1.4:45108908-45108927 | MS.gene46472:intron | 50.0% | |
| AGGGTGACATTGCCGATCAT+AGG | + | chr1.4:45110633-45110652 | None:intergenic | 50.0% | |
| AGTCTCCCTTACAGACACAG+TGG | - | chr1.4:45107743-45107762 | MS.gene46472:intron | 50.0% | |
| ATCTCAGGTGTCAAACTGGC+AGG | + | chr1.4:45110866-45110885 | None:intergenic | 50.0% | |
| ATGAGATCTCCGGTAGGGAT+TGG | + | chr1.4:45107792-45107811 | None:intergenic | 50.0% | |
| ATTCGAGTGTGCTCCTCTCA+AGG | - | chr1.4:45108050-45108069 | MS.gene46472:intron | 50.0% | |
| CAAAATGGCACCCTCAAGCT+TGG | + | chr1.4:45112583-45112602 | None:intergenic | 50.0% | |
| CACTTGTGGGGCTCCATTTA+AGG | + | chr1.4:45108125-45108144 | None:intergenic | 50.0% | |
| CGCTCTTTATGCCAAGCTTG+AGG | - | chr1.4:45112569-45112588 | MS.gene46472:intron | 50.0% | |
| CGGCAACGGTGAGAACAAAA+GGG | + | chr1.4:45107909-45107928 | None:intergenic | 50.0% | |
| CTCTAACATAAGCAGCGTCC+GGG | - | chr1.4:45110521-45110540 | MS.gene46472:intron | 50.0% | |
| CTGTGTCTGTAAGGGAGACT+TGG | + | chr1.4:45107743-45107762 | None:intergenic | 50.0% | |
| CTTAAATGGAGCCCCACAAG+TGG | - | chr1.4:45108123-45108142 | MS.gene46472:intron | 50.0% | |
| GAAGGGTTCCAATGTGAGGT+CGG | - | chr1.4:45109398-45109417 | MS.gene46472:CDS | 50.0% | |
| GCAACGGTGAGAACAAAAGG+GGG | + | chr1.4:45107907-45107926 | None:intergenic | 50.0% | |
| GCCAACCGCTTTACCAGAAA+GGG | + | chr1.4:45110791-45110810 | None:intergenic | 50.0% | |
| GCGCCCTAAAAAAAAAGGGC+AGG | - | chr1.4:45110484-45110503 | MS.gene46472:intron | 50.0% | |
| GCTCTAACATAAGCAGCGTC+CGG | - | chr1.4:45110520-45110539 | MS.gene46472:intron | 50.0% | |
| GGATTCCTTAACCAGTGCCT+AGG | + | chr1.4:45108799-45108818 | None:intergenic | 50.0% | |
| GGCAACGGTGAGAACAAAAG+GGG | + | chr1.4:45107908-45107927 | None:intergenic | 50.0% | |
| GGGTGACATTGCCGATCATA+GGG | + | chr1.4:45110632-45110651 | None:intergenic | 50.0% | |
| GGTGCTTTGCTGCCAATCTT+TGG | - | chr1.4:45112538-45112557 | MS.gene46472:intron | 50.0% | |
| GTCTCCCTTACAGACACAGT+GGG | - | chr1.4:45107744-45107763 | MS.gene46472:intron | 50.0% | |
| GTCTGTAAGGGAGACTTGGA+TGG | + | chr1.4:45107739-45107758 | None:intergenic | 50.0% | |
| GTGGTAGGCATCCGAGAAAA+AGG | + | chr1.4:45111257-45111276 | None:intergenic | 50.0% | |
| TCTTGTTAACCAGTGCCCCT+AGG | - | chr1.4:45108779-45108798 | MS.gene46472:intron | 50.0% | |
| TGAGATCTCCGGTAGGGATT+GGG | + | chr1.4:45107791-45107810 | None:intergenic | 50.0% | |
| TGAGTGTGACTCCTCTCTAG+TGG | - | chr1.4:45112647-45112666 | MS.gene46472:intron | 50.0% | |
| TGTGGATGAGATCTCCGGTA+GGG | + | chr1.4:45107797-45107816 | None:intergenic | 50.0% | |
| ! | ACCCCGGTTCCTTTGAAAAG+AGG | + | chr1.4:45110759-45110778 | None:intergenic | 50.0% |
| ! | AGATTGGCAGCAAAGCACCA+AGG | + | chr1.4:45112537-45112556 | None:intergenic | 50.0% |
| ! | ATAGTTCTCTCCGAGCATCG+CGG | + | chr1.4:45113385-45113404 | None:intergenic | 50.0% |
| ! | CGGTATCACCGACTAATCCA+AGG | + | chr1.4:45108165-45108184 | None:intergenic | 50.0% |
| ! | GATTGGCAGCAAAGCACCAA+GGG | + | chr1.4:45112536-45112555 | None:intergenic | 50.0% |
| ! | TCCCTTTCTGGTAAAGCGGT+TGG | - | chr1.4:45110787-45110806 | MS.gene46472:intron | 50.0% |
| ! | TGGGGCTCCATTTAAGGCTA+TGG | + | chr1.4:45108119-45108138 | None:intergenic | 50.0% |
| !! | CGGGTGTGCAATTTGCTGAT+TGG | - | chr1.4:45110307-45110326 | MS.gene46472:intron | 50.0% |
| !! | GCATTTCGCATTGAGTTGGC+TGG | - | chr1.4:45111655-45111674 | MS.gene46472:intron | 50.0% |
| !! | TTTCGCATTGAGTTGGCTGG+TGG | - | chr1.4:45111658-45111677 | MS.gene46472:intron | 50.0% |
| !!! | CAAGCTTGAGGGTGCCATTT+TGG | - | chr1.4:45112581-45112600 | MS.gene46472:intron | 50.0% |
| AAAAGGGGGAGGAGAGGTTG+GGG | + | chr1.4:45107893-45107912 | None:intergenic | 55.0% | |
| AACATAAGCAGCGTCCGGGA+AGG | - | chr1.4:45110525-45110544 | MS.gene46472:intron | 55.0% | |
| ACAAAAGGGGGAGGAGAGGT+TGG | + | chr1.4:45107895-45107914 | None:intergenic | 55.0% | |
| ACATAAGCAGCGTCCGGGAA+GGG | - | chr1.4:45110526-45110545 | MS.gene46472:intron | 55.0% | |
| ACGGTGAGAACAAAAGGGGG+AGG | + | chr1.4:45107904-45107923 | None:intergenic | 55.0% | |
| CAAAAGGGGGAGGAGAGGTT+GGG | + | chr1.4:45107894-45107913 | None:intergenic | 55.0% | |
| CAAGAGTAACAGACGGGGTG+GGG | + | chr1.4:45107858-45107877 | None:intergenic | 55.0% | |
| CATCGGCAATTGCAGTGCAG+TGG | + | chr1.4:45109277-45109296 | None:intergenic | 55.0% | |
| CCTGGATGGTAGCAAGTTGC+TGG | - | chr1.4:45113259-45113278 | MS.gene46472:CDS | 55.0% | |
| CGAGGCAAGAGTAACAGACG+GGG | + | chr1.4:45107863-45107882 | None:intergenic | 55.0% | |
| CTAGATAGTGCAGCCACCCT+TGG | - | chr1.4:45112517-45112536 | MS.gene46472:intron | 55.0% | |
| CTGCTTAACCAATGCTCCGG+GGG | - | chr1.4:45108910-45108929 | MS.gene46472:intron | 55.0% | |
| GAGAACAAAAGGGGGAGGAG+AGG | + | chr1.4:45107899-45107918 | None:intergenic | 55.0% | |
| GAGTGCAGAGACCACTAGAG+AGG | + | chr1.4:45112661-45112680 | None:intergenic | 55.0% | |
| GATTGGGCGAGTTGCGAAGA+CGG | + | chr1.4:45107775-45107794 | None:intergenic | 55.0% | |
| GCAAGAGTAACAGACGGGGT+GGG | + | chr1.4:45107859-45107878 | None:intergenic | 55.0% | |
| GCCCTCCGTGACATTGATGA+AGG | - | chr1.4:45112079-45112098 | MS.gene46472:intron | 55.0% | |
| GCGACCCACTGTGTCTGTAA+GGG | + | chr1.4:45107751-45107770 | None:intergenic | 55.0% | |
| GCGAGGCAAGAGTAACAGAC+GGG | + | chr1.4:45107864-45107883 | None:intergenic | 55.0% | |
| GCGGCAACGGTGAGAACAAA+AGG | + | chr1.4:45107910-45107929 | None:intergenic | 55.0% | |
| GCTGCTTAACCAATGCTCCG+GGG | - | chr1.4:45108909-45108928 | MS.gene46472:intron | 55.0% | |
| GGCGAGGCAAGAGTAACAGA+CGG | + | chr1.4:45107865-45107884 | None:intergenic | 55.0% | |
| GTAAGGGAGACTTGGATGGG+AGG | + | chr1.4:45107735-45107754 | None:intergenic | 55.0% | |
| GTAGAAGCCGAAGCTGCTGT+TGG | - | chr1.4:45111721-45111740 | MS.gene46472:intron | 55.0% | |
| GTGTGGATGAGATCTCCGGT+AGG | + | chr1.4:45107798-45107817 | None:intergenic | 55.0% | |
| TATTAGTCGGGCGGATCTGG+AGG | + | chr1.4:45112822-45112841 | None:intergenic | 55.0% | |
| TTGGATGGGAGGTGGCTTCT+GGG | + | chr1.4:45107724-45107743 | None:intergenic | 55.0% | |
| !! | CCAGCAACTTGCTACCATCC+AGG | + | chr1.4:45113262-45113281 | None:intergenic | 55.0% |
| AGGGAGACTTGGATGGGAGG+TGG | + | chr1.4:45107732-45107751 | None:intergenic | 60.0% | |
| CACGCACCTGGGTATGAGTG+CGG | + | chr1.4:45107929-45107948 | None:intergenic | 60.0% | |
| CATAAGCAGCGTCCGGGAAG+GGG | - | chr1.4:45110527-45110546 | MS.gene46472:intron | 60.0% | |
| CCTGGGTATGAGTGCGGCAA+CGG | + | chr1.4:45107923-45107942 | None:intergenic | 60.0% | |
| CGCGACCCACTGTGTCTGTA+AGG | + | chr1.4:45107752-45107771 | None:intergenic | 60.0% | |
| CTTGGATGGGAGGTGGCTTC+TGG | + | chr1.4:45107725-45107744 | None:intergenic | 60.0% | |
| GCAACTCGCCCAATCCCTAC+CGG | - | chr1.4:45107780-45107799 | MS.gene46472:intron | 60.0% | |
| GGAAGGTGAAGGGTGGCAGA+CGG | + | chr1.4:45107832-45107851 | None:intergenic | 60.0% | |
| GGCAAGAGTAACAGACGGGG+TGG | + | chr1.4:45107860-45107879 | None:intergenic | 60.0% | |
| GGCGGTGTGGATGAGATCTC+CGG | + | chr1.4:45107802-45107821 | None:intergenic | 60.0% | |
| TAACCAGTGCCCCTAGGCAC+TGG | - | chr1.4:45108785-45108804 | MS.gene46472:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr1.4:45110542-45110561 | None:intergenic | 60.0% |
| ! | TAACCAGTGCCTAGGGGCAC+TGG | + | chr1.4:45108791-45108810 | None:intergenic | 60.0% |
| ! | TGGCAGCAAAGCACCAAGGG+TGG | + | chr1.4:45112533-45112552 | None:intergenic | 60.0% |
| !! | CGCATTGAGTTGGCTGGTGG+TGG | - | chr1.4:45111661-45111680 | MS.gene46472:intron | 60.0% |
| !! | GTGCCCCTAGGCACTGGTTA+AGG | - | chr1.4:45108791-45108810 | MS.gene46472:intron | 60.0% |
| AACCAGTGCCCCCGGAGCAT+TGG | + | chr1.4:45108921-45108940 | None:intergenic | 65.0% | |
| AGAGGTTGGGGAGTCTGGCG+AGG | + | chr1.4:45107881-45107900 | None:intergenic | 65.0% | |
| AGGTGAAGGGTGGCAGACGG+CGG | + | chr1.4:45107829-45107848 | None:intergenic | 65.0% | |
| AGTCGGGCGGATCTGGAGGT+AGG | + | chr1.4:45112818-45112837 | None:intergenic | 65.0% | |
| CCAGTCTGGACCGCGATGCT+CGG | - | chr1.4:45113372-45113391 | MS.gene46472:CDS | 65.0% | |
| CCGTTGCCGCACTCATACCC+AGG | - | chr1.4:45107920-45107939 | MS.gene46472:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr1.4:45110540-45110559 | MS.gene46472:intron | 65.0% | |
| GGAGGAGAGGTTGGGGAGTC+TGG | + | chr1.4:45107886-45107905 | None:intergenic | 65.0% | |
| GGTGGGGAGCGGAAGGTGAA+GGG | + | chr1.4:45107842-45107861 | None:intergenic | 65.0% | |
| GTAACAGACGGGGTGGGGAG+CGG | + | chr1.4:45107853-45107872 | None:intergenic | 65.0% | |
| ! | AACCAATGCTCCGGGGGCAC+TGG | - | chr1.4:45108916-45108935 | MS.gene46472:intron | 65.0% |
| GGGGAGCGGAAGGTGAAGGG+TGG | + | chr1.4:45107839-45107858 | None:intergenic | 70.0% | |
| GGGTGGGGAGCGGAAGGTGA+AGG | + | chr1.4:45107843-45107862 | None:intergenic | 70.0% | |
| GGTGAAGGGTGGCAGACGGC+GGG | + | chr1.4:45107828-45107847 | None:intergenic | 70.0% | |
| ! | AGGGTGGCAGACGGCGGGTT+CGG | + | chr1.4:45107823-45107842 | None:intergenic | 70.0% |
| ! | CCGAGCATCGCGGTCCAGAC+TGG | + | chr1.4:45113375-45113394 | None:intergenic | 70.0% |
| CAGACGGGGTGGGGAGCGGA+AGG | + | chr1.4:45107849-45107868 | None:intergenic | 75.0% | |
| ! | AGACGGCGGGTTCGGCGGTG+TGG | + | chr1.4:45107815-45107834 | None:intergenic | 75.0% |
| ! | GTGGCAGACGGCGGGTTCGG+CGG | + | chr1.4:45107820-45107839 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 45107633 | 45113460 | 45107633 | ID=MS.gene46472 |
| chr1.4 | mRNA | 45107633 | 45113460 | 45107633 | ID=MS.gene46472.t1;Parent=MS.gene46472 |
| chr1.4 | exon | 45113152 | 45113460 | 45113152 | ID=MS.gene46472.t1.exon1;Parent=MS.gene46472.t1 |
| chr1.4 | CDS | 45113152 | 45113460 | 45113152 | ID=cds.MS.gene46472.t1;Parent=MS.gene46472.t1 |
| chr1.4 | exon | 45111387 | 45111442 | 45111387 | ID=MS.gene46472.t1.exon2;Parent=MS.gene46472.t1 |
| chr1.4 | CDS | 45111387 | 45111442 | 45111387 | ID=cds.MS.gene46472.t1;Parent=MS.gene46472.t1 |
| chr1.4 | exon | 45110198 | 45110324 | 45110198 | ID=MS.gene46472.t1.exon3;Parent=MS.gene46472.t1 |
| chr1.4 | CDS | 45110198 | 45110324 | 45110198 | ID=cds.MS.gene46472.t1;Parent=MS.gene46472.t1 |
| chr1.4 | exon | 45109595 | 45109664 | 45109595 | ID=MS.gene46472.t1.exon4;Parent=MS.gene46472.t1 |
| chr1.4 | CDS | 45109595 | 45109664 | 45109595 | ID=cds.MS.gene46472.t1;Parent=MS.gene46472.t1 |
| chr1.4 | exon | 45109306 | 45109488 | 45109306 | ID=MS.gene46472.t1.exon5;Parent=MS.gene46472.t1 |
| chr1.4 | CDS | 45109306 | 45109488 | 45109306 | ID=cds.MS.gene46472.t1;Parent=MS.gene46472.t1 |
| chr1.4 | exon | 45108993 | 45109064 | 45108993 | ID=MS.gene46472.t1.exon6;Parent=MS.gene46472.t1 |
| chr1.4 | CDS | 45108993 | 45109064 | 45108993 | ID=cds.MS.gene46472.t1;Parent=MS.gene46472.t1 |
| chr1.4 | exon | 45107633 | 45107751 | 45107633 | ID=MS.gene46472.t1.exon7;Parent=MS.gene46472.t1 |
| chr1.4 | CDS | 45107633 | 45107751 | 45107633 | ID=cds.MS.gene46472.t1;Parent=MS.gene46472.t1 |
| Gene Sequence |
| Protein sequence |
