Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46550.t1 | XP_024627300.1 | 89.5 | 306 | 28 | 2 | 1 | 302 | 1 | 306 | 2.70E-146 | 528.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46550.t1 | Q6IP65 | 54.4 | 261 | 119 | 0 | 33 | 293 | 28 | 288 | 2.6e-73 | 276.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46550.t1 | A0A396GV60 | 89.5 | 306 | 28 | 2 | 1 | 302 | 1 | 306 | 1.9e-146 | 528.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene46550.t1 | TR | Rcd1-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46550.t1 | MTR_5g093460 | 66.780 | 295 | 97 | 1 | 5 | 299 | 144 | 437 | 1.31e-132 | 384 |
| MS.gene46550.t1 | MTR_5g093460 | 88.550 | 131 | 14 | 1 | 24 | 154 | 1 | 130 | 7.62e-74 | 233 |
| MS.gene46550.t1 | MTR_6g065170 | 64.000 | 300 | 108 | 0 | 1 | 300 | 11 | 310 | 2.02e-130 | 374 |
| MS.gene46550.t1 | MTR_8g106940 | 62.333 | 300 | 113 | 0 | 1 | 300 | 11 | 310 | 2.31e-129 | 371 |
| MS.gene46550.t1 | MTR_3g018640 | 64.360 | 289 | 103 | 0 | 3 | 291 | 13 | 301 | 7.73e-126 | 361 |
| MS.gene46550.t1 | MTR_3g053170 | 62.409 | 274 | 103 | 0 | 28 | 301 | 26 | 299 | 2.17e-119 | 345 |
| MS.gene46550.t1 | MTR_1g056470 | 65.812 | 234 | 80 | 0 | 14 | 247 | 20 | 253 | 2.21e-110 | 321 |
| MS.gene46550.t1 | MTR_1g043540 | 60.331 | 121 | 47 | 1 | 129 | 249 | 6 | 125 | 6.20e-41 | 139 |
| MS.gene46550.t1 | MTR_1g043520 | 40.870 | 115 | 31 | 3 | 158 | 272 | 29 | 106 | 5.46e-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46550.t1 | AT3G20800 | 57.235 | 311 | 122 | 1 | 1 | 300 | 1 | 311 | 9.24e-116 | 336 |
| MS.gene46550.t1 | AT5G12980 | 54.074 | 270 | 124 | 0 | 22 | 291 | 29 | 298 | 7.71e-101 | 298 |
| MS.gene46550.t1 | AT2G32550 | 33.955 | 268 | 167 | 4 | 31 | 288 | 53 | 320 | 4.24e-39 | 140 |
| MS.gene46550.t1 | AT2G32550 | 34.921 | 252 | 138 | 4 | 54 | 288 | 39 | 281 | 5.22e-39 | 139 |
| MS.gene46550.t1 | AT2G32550 | 37.374 | 198 | 121 | 2 | 94 | 288 | 29 | 226 | 9.20e-37 | 131 |
Find 60 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCCCAATTTGAGCATTTA+AGG | 0.127092 | 7.1:+59455493 | MS.gene46550:CDS |
| CGGAACTTGCACCTTTATTA+TGG | 0.186230 | 7.1:+59454029 | MS.gene46550:CDS |
| CAAGCCTTAAATGCTCAAAT+TGG | 0.232859 | 7.1:-59455497 | None:intergenic |
| TAAGAGGATTGGGTTATTTC+CGG | 0.242539 | 7.1:+59454009 | MS.gene46550:intron |
| ATGAAGTTGCATGAAAATAT+TGG | 0.267240 | 7.1:+59458671 | MS.gene46550:CDS |
| CCTTTATTATGGAATTCTTA+TGG | 0.279542 | 7.1:+59454040 | MS.gene46550:CDS |
| AAGGAAATCTATGCCTTCTT+TGG | 0.298112 | 7.1:-59456205 | None:intergenic |
| AATAGAGAAACTAACAGTTT+TGG | 0.311116 | 7.1:-59456286 | None:intergenic |
| TGAAGTTGCATGAAAATATT+GGG | 0.343625 | 7.1:+59458672 | MS.gene46550:CDS |
| TTTGTGCTGTGGTGCTAGAC+TGG | 0.350221 | 7.1:-59452404 | None:intergenic |
| CATAATAAAGGTGCAAGTTC+CGG | 0.352274 | 7.1:-59454028 | None:intergenic |
| GGGCTTGCAATGCATTAAAA+AGG | 0.353362 | 7.1:+59456728 | MS.gene46550:intron |
| CAATGTTCTGGAACTACTTC+AGG | 0.355418 | 7.1:+59454843 | MS.gene46550:CDS |
| ATTCCCTCCACCTGGTACTA+AGG | 0.362304 | 7.1:-59458708 | None:intergenic |
| CCATAAGAATTCCATAATAA+AGG | 0.371929 | 7.1:-59454040 | None:intergenic |
| AACTCGAGTGTGCAATGTTC+TGG | 0.374857 | 7.1:+59454831 | MS.gene46550:CDS |
| AACTCAACAATCCTGATCTC+AGG | 0.384176 | 7.1:+59452457 | MS.gene46550:CDS |
| CTTGCTAGTCTTGGAGTCAT+TGG | 0.399485 | 7.1:+59455516 | MS.gene46550:CDS |
| CATTTAAGGCTTGCTAGTCT+TGG | 0.414086 | 7.1:+59455507 | MS.gene46550:CDS |
| CTAACTCGCTTGTCGTTTGA+AGG | 0.424446 | 7.1:-59455473 | None:intergenic |
| TCGCTTGTCGTTTGAAGGAA+TGG | 0.449153 | 7.1:-59455468 | None:intergenic |
| TTCAATAACAAGGCGTTCCA+TGG | 0.458343 | 7.1:-59452436 | None:intergenic |
| TGCCTACGCAGCATGGAAAT+CGG | 0.460606 | 7.1:+59456252 | MS.gene46550:CDS |
| TACTATTGAAATATTTGTAC+AGG | 0.478947 | 7.1:+59454063 | MS.gene46550:CDS |
| AAAATTATGTCAGATGATGA+TGG | 0.481246 | 7.1:+59456465 | MS.gene46550:CDS |
| TGCTCTTCGTGTTCTCTCCA+AGG | 0.482455 | 7.1:+59452485 | MS.gene46550:CDS |
| AGATTCAACAGCGGAATAGT+AGG | 0.487502 | 7.1:-59454793 | None:intergenic |
| TTGTGCTGTGGTGCTAGACT+GGG | 0.492743 | 7.1:-59452403 | None:intergenic |
| AAGCCTTAAATGCTCAAATT+GGG | 0.502413 | 7.1:-59455496 | None:intergenic |
| GATGGTTTGATTTATGTTTG+TGG | 0.502440 | 7.1:+59456483 | MS.gene46550:CDS |
| TGAAAATATTGGGGTGAACC+AGG | 0.503360 | 7.1:+59458682 | MS.gene46550:CDS |
| AGCACAAAGCATGGCATCCA+TGG | 0.505480 | 7.1:+59452419 | MS.gene46550:CDS |
| AAGATGAAACAACTTGGAGC+TGG | 0.506447 | 7.1:+59458645 | MS.gene46550:CDS |
| GACTGGGATGAAGCAGTTCG+AGG | 0.524129 | 7.1:-59452387 | None:intergenic |
| TCACAGGTTAACACCAAAGA+AGG | 0.528410 | 7.1:+59456192 | MS.gene46550:intron |
| TCTTGGAGTCATTGGTGCAT+TGG | 0.530074 | 7.1:+59455524 | MS.gene46550:CDS |
| CACCTGGTACTAAGGGAACC+TGG | 0.533033 | 7.1:-59458700 | None:intergenic |
| TCCACTATGCCTACGCAGCA+TGG | 0.546502 | 7.1:+59456245 | MS.gene46550:CDS |
| GGATGCCATGCTTTGTGCTG+TGG | 0.548520 | 7.1:-59452415 | None:intergenic |
| TTCAGGAAGATGAAACAACT+TGG | 0.555820 | 7.1:+59458639 | MS.gene46550:intron |
| AACCAGGTTCCCTTAGTACC+AGG | 0.560044 | 7.1:+59458698 | MS.gene46550:CDS |
| ACTCAACAATCCTGATCTCA+GGG | 0.561365 | 7.1:+59452458 | MS.gene46550:CDS |
| TCCGCTGTTGAATCTTACTC+AGG | 0.564161 | 7.1:+59454801 | MS.gene46550:CDS |
| GTTCCCTTAGTACCAGGTGG+AGG | 0.568228 | 7.1:+59458704 | MS.gene46550:CDS |
| TTCCCTCCACCTGGTACTAA+GGG | 0.571710 | 7.1:-59458707 | None:intergenic |
| AGATGAAACAACTTGGAGCT+GGG | 0.578633 | 7.1:+59458646 | MS.gene46550:CDS |
| TCCATGCTGCGTAGGCATAG+TGG | 0.580220 | 7.1:-59456246 | None:intergenic |
| TTCCCTTAGTACCAGGTGGA+GGG | 0.586677 | 7.1:+59458705 | MS.gene46550:CDS |
| GAATTATCTCACTTCTCAGA+AGG | 0.602747 | 7.1:-59456224 | None:intergenic |
| TGCCGATTTCCATGCTGCGT+AGG | 0.604124 | 7.1:-59456254 | None:intergenic |
| AGTCATTGGTGCATTGGTGA+AGG | 0.613240 | 7.1:+59455530 | MS.gene46550:CDS |
| TAGCACCACAGCACAAAGCA+TGG | 0.618274 | 7.1:+59452410 | MS.gene46550:CDS |
| TATCATTGATTCCCTCCACC+TGG | 0.621495 | 7.1:-59458716 | None:intergenic |
| AGTTTGATCAATTGATGTGA+AGG | 0.628164 | 7.1:-59456573 | None:intergenic |
| AACATGGTATTGGAAAGTGT+TGG | 0.637520 | 7.1:+59456543 | MS.gene46550:CDS |
| GATTGTTGAGTTCAATAACA+AGG | 0.670356 | 7.1:-59452446 | None:intergenic |
| GAAGTTGCATGAAAATATTG+GGG | 0.686036 | 7.1:+59458673 | MS.gene46550:CDS |
| CAGGTTCCCTTAGTACCAGG+TGG | 0.694292 | 7.1:+59458701 | MS.gene46550:CDS |
| TGAGACAAAAGAGAATAACA+TGG | 0.703854 | 7.1:-59456603 | None:intergenic |
| GCCTGAGTAAGATTCAACAG+CGG | 0.773865 | 7.1:-59454802 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTAATATAAATACAATA+TGG | - | chr7.1:59457858-59457877 | None:intergenic | 10.0% |
| !! | ATGATTAACATATATTAAAA+TGG | - | chr7.1:59453817-59453836 | None:intergenic | 10.0% |
| !! | GAAATTATTATAATTAACAA+AGG | - | chr7.1:59456153-59456172 | None:intergenic | 10.0% |
| !! | TATGTTAATCATTATTAATT+AGG | + | chr7.1:59453825-59453844 | MS.gene46550:intron | 10.0% |
| !! | TGATTAACATATATTAAAAT+GGG | - | chr7.1:59453816-59453835 | None:intergenic | 10.0% |
| !! | TTGAAAACATAAATATAAAT+TGG | - | chr7.1:59454424-59454443 | None:intergenic | 10.0% |
| !!! | AAAAAATTAACTTGAATAAT+TGG | + | chr7.1:59453161-59453180 | MS.gene46550:intron | 10.0% |
| !!! | ATTAGTAACTTTAAAATTTT+TGG | + | chr7.1:59455771-59455790 | MS.gene46550:intron | 10.0% |
| !!! | ATTATTTTTATAATGTTCTT+AGG | + | chr7.1:59455867-59455886 | MS.gene46550:intron | 10.0% |
| !!! | TGTATAAATTTTAATATTTC+TGG | + | chr7.1:59457830-59457849 | MS.gene46550:intron | 10.0% |
| !!! | TTATTTTTATAATGTTCTTA+GGG | + | chr7.1:59455868-59455887 | MS.gene46550:intron | 10.0% |
| !!! | TTGATTTTCAAATATTTTAT+TGG | - | chr7.1:59454932-59454951 | None:intergenic | 10.0% |
| !!! | TTTTAAAGTTACTAATAAAT+TGG | - | chr7.1:59455767-59455786 | None:intergenic | 10.0% |
| !!! | TTTTATTGTTTTTATTTTTG+GGG | + | chr7.1:59452697-59452716 | MS.gene46550:intron | 10.0% |
| !! | AATGTGAAAAAAAAAACTAT+TGG | + | chr7.1:59456913-59456932 | MS.gene46550:intron | 15.0% |
| !! | ATCTTATATCTCATAATAAT+AGG | - | chr7.1:59457962-59457981 | None:intergenic | 15.0% |
| !! | GAAAAAAGTTATTATGTATT+TGG | + | chr7.1:59454257-59454276 | MS.gene46550:intron | 15.0% |
| !! | GTATGATAAACAAATTTAAT+AGG | - | chr7.1:59456890-59456909 | None:intergenic | 15.0% |
| !! | TAACAAAGGAAAAATAAATA+TGG | - | chr7.1:59456139-59456158 | None:intergenic | 15.0% |
| !! | TATTATTATGAGATATAAGA+TGG | + | chr7.1:59457961-59457980 | MS.gene46550:intron | 15.0% |
| !! | TTTAAAAAAAATAAGTGGTT+AGG | - | chr7.1:59456074-59456093 | None:intergenic | 15.0% |
| !!! | AATATTTTCACACTTTAATT+AGG | + | chr7.1:59458465-59458484 | MS.gene46550:intron | 15.0% |
| !!! | AATGTCTTTATATGATTTTT+TGG | + | chr7.1:59453637-59453656 | MS.gene46550:intron | 15.0% |
| !!! | AGAAAATGAAAATTTTCATT+TGG | + | chr7.1:59453743-59453762 | MS.gene46550:intron | 15.0% |
| !!! | AGATAGTTTTTAAAATAACA+AGG | - | chr7.1:59455803-59455822 | None:intergenic | 15.0% |
| !!! | ATATTGTATTTTATAACCTT+AGG | + | chr7.1:59458068-59458087 | MS.gene46550:intron | 15.0% |
| !!! | CTTGATGTTAATAATTTTTA+TGG | + | chr7.1:59455592-59455611 | MS.gene46550:intron | 15.0% |
| !!! | GATTCTTTAAAAAAAATAAG+TGG | - | chr7.1:59456079-59456098 | None:intergenic | 15.0% |
| !!! | TTATTGATAATGTACTTTTT+TGG | - | chr7.1:59457670-59457689 | None:intergenic | 15.0% |
| !!! | TTTATTGTTTTTATTTTTGG+GGG | + | chr7.1:59452698-59452717 | MS.gene46550:intron | 15.0% |
| !!! | TTTCATTTTTTAAGTTTAAG+AGG | + | chr7.1:59453993-59454012 | MS.gene46550:intron | 15.0% |
| !! | AAATTCTTTCATATTAACAC+AGG | + | chr7.1:59456707-59456726 | MS.gene46550:intron | 20.0% |
| !! | AAGACTCTGTAAAAATAAAT+TGG | - | chr7.1:59456324-59456343 | None:intergenic | 20.0% |
| !! | AATTCTTTCATATTAACACA+GGG | + | chr7.1:59456708-59456727 | MS.gene46550:intron | 20.0% |
| !! | ACTCATAACAAAATAAGAAA+AGG | + | chr7.1:59455619-59455638 | MS.gene46550:intron | 20.0% |
| !! | AGGAATGGATAAAAATATAA+AGG | - | chr7.1:59455456-59455475 | None:intergenic | 20.0% |
| !! | AGGTTTAAATTGTTTATAAG+TGG | + | chr7.1:59458369-59458388 | MS.gene46550:intron | 20.0% |
| !! | ATATTAGTAACATAAGTGAA+TGG | - | chr7.1:59456396-59456415 | None:intergenic | 20.0% |
| !! | GTTTAATATTGTAACATCAA+TGG | + | chr7.1:59454601-59454620 | MS.gene46550:intron | 20.0% |
| !! | TACTATTGAAATATTTGTAC+AGG | + | chr7.1:59454063-59454082 | MS.gene46550:CDS | 20.0% |
| !! | TCAAAAGTTAAAAAAAAGCA+AGG | - | chr7.1:59454351-59454370 | None:intergenic | 20.0% |
| !! | TTAATAGGATGAAATGAAAT+AGG | + | chr7.1:59453090-59453109 | MS.gene46550:intron | 20.0% |
| !! | TTGTTTATATGAATTTGACT+TGG | + | chr7.1:59456344-59456363 | MS.gene46550:intron | 20.0% |
| !! | TTTATGTTCTTAAGTTTGAA+GGG | - | chr7.1:59458436-59458455 | None:intergenic | 20.0% |
| !!! | AATATGATTCCTTTTTTTGT+TGG | - | chr7.1:59457616-59457635 | None:intergenic | 20.0% |
| !!! | ATATTTTCACAAAGTAAATG+AGG | + | chr7.1:59458349-59458368 | MS.gene46550:intron | 20.0% |
| !!! | ATTCCTAATATGTATTTTCA+AGG | - | chr7.1:59455989-59456008 | None:intergenic | 20.0% |
| !!! | CAAATACTCAATTACAATTT+TGG | + | chr7.1:59458535-59458554 | MS.gene46550:intron | 20.0% |
| !!! | CCATTTTTAATATCTTTCAT+GGG | + | chr7.1:59452534-59452553 | MS.gene46550:intron | 20.0% |
| !!! | GAAGATTTGTTTCAATTTTA+AGG | + | chr7.1:59452845-59452864 | MS.gene46550:intron | 20.0% |
| !!! | GGTGAGAATAATATTTTATT+AGG | + | chr7.1:59453846-59453865 | MS.gene46550:intron | 20.0% |
| !!! | TAATATTTTATTAGGTGCTA+TGG | + | chr7.1:59453854-59453873 | MS.gene46550:intron | 20.0% |
| !!! | TCCATTTTTAATATCTTTCA+TGG | + | chr7.1:59452533-59452552 | MS.gene46550:intron | 20.0% |
| !!! | TGTTTTGCATTATTTGATAT+TGG | + | chr7.1:59458600-59458619 | MS.gene46550:intron | 20.0% |
| !!! | TTTGGATAACTATGATTTTT+TGG | + | chr7.1:59453655-59453674 | MS.gene46550:intron | 20.0% |
| !!! | TTTGTTACTCAACATTTTAA+TGG | + | chr7.1:59456936-59456955 | MS.gene46550:intron | 20.0% |
| !!! | TTTTAATTACCTTTATACAG+AGG | + | chr7.1:59458563-59458582 | MS.gene46550:intron | 20.0% |
| !!! | TTTTATGTTCTTAAGTTTGA+AGG | - | chr7.1:59458437-59458456 | None:intergenic | 20.0% |
| !!! | TTTTTAAGTTTAAGAGGATT+GGG | + | chr7.1:59453999-59454018 | MS.gene46550:intron | 20.0% |
| !!! | TTTTTCTTGTTTTAAAGCTA+AGG | + | chr7.1:59458197-59458216 | MS.gene46550:intron | 20.0% |
| !!! | TTTTTTAAGTTTAAGAGGAT+TGG | + | chr7.1:59453998-59454017 | MS.gene46550:intron | 20.0% |
| !!! | TTTTTTTAAAATTGTCCAAG+AGG | + | chr7.1:59454559-59454578 | MS.gene46550:intron | 20.0% |
| ! | AAAATTATGTCAGATGATGA+TGG | + | chr7.1:59456465-59456484 | MS.gene46550:CDS | 25.0% |
| ! | AAATTGGTGAATGAATGAAA+CGG | - | chr7.1:59454408-59454427 | None:intergenic | 25.0% |
| ! | ACAAATGAGACATGATTATA+AGG | + | chr7.1:59454492-59454511 | MS.gene46550:intron | 25.0% |
| ! | ATGAAGTTGCATGAAAATAT+TGG | + | chr7.1:59458671-59458690 | MS.gene46550:CDS | 25.0% |
| ! | CAAATGAGACATGATTATAA+GGG | + | chr7.1:59454493-59454512 | MS.gene46550:intron | 25.0% |
| ! | CCATAAGAATTCCATAATAA+AGG | - | chr7.1:59454043-59454062 | None:intergenic | 25.0% |
| ! | CCCATGAAAGATATTAAAAA+TGG | - | chr7.1:59452537-59452556 | None:intergenic | 25.0% |
| ! | CCTTTATTATGGAATTCTTA+TGG | + | chr7.1:59454040-59454059 | MS.gene46550:CDS | 25.0% |
| ! | GTAAGAATGTGATAGTTAAT+AGG | + | chr7.1:59453075-59453094 | MS.gene46550:intron | 25.0% |
| ! | GTTCCTTGAAAATACATATT+AGG | + | chr7.1:59455983-59456002 | MS.gene46550:intron | 25.0% |
| ! | TAAATTGTTTATAAGTGGTG+AGG | + | chr7.1:59458374-59458393 | MS.gene46550:intron | 25.0% |
| ! | TAAGAAAGAGATGATTAGAA+AGG | + | chr7.1:59453035-59453054 | MS.gene46550:intron | 25.0% |
| ! | TAATTTCCAATAGTATCCTA+AGG | - | chr7.1:59458087-59458106 | None:intergenic | 25.0% |
| ! | TGAAGTTGCATGAAAATATT+GGG | + | chr7.1:59458672-59458691 | MS.gene46550:CDS | 25.0% |
| ! | TGTTACAAAATTGCATTAGT+TGG | + | chr7.1:59452911-59452930 | MS.gene46550:intron | 25.0% |
| ! | TTATAACCTTAGGATACTAT+TGG | + | chr7.1:59458078-59458097 | MS.gene46550:intron | 25.0% |
| ! | TTGTGATGTGAAACTATATT+TGG | + | chr7.1:59455674-59455693 | MS.gene46550:intron | 25.0% |
| ! | TTTAAACTACCTCTGTATAA+AGG | - | chr7.1:59458575-59458594 | None:intergenic | 25.0% |
| !! | AATAGAGAAACTAACAGTTT+TGG | - | chr7.1:59456289-59456308 | None:intergenic | 25.0% |
| !! | ACAAAAATGTCATTTCTCAA+TGG | + | chr7.1:59455076-59455095 | MS.gene46550:CDS | 25.0% |
| !! | AGAAATCTAGAACAATTAAG+AGG | - | chr7.1:59455121-59455140 | None:intergenic | 25.0% |
| !! | AGAAATGACATTTTTGTATC+AGG | - | chr7.1:59455073-59455092 | None:intergenic | 25.0% |
| !! | AGATTGATCATTTGTTACTA+AGG | + | chr7.1:59454184-59454203 | MS.gene46550:intron | 25.0% |
| !! | GAAATGACATTTTTGTATCA+GGG | - | chr7.1:59455072-59455091 | None:intergenic | 25.0% |
| !! | GATATATTGAAGTTATTTCC+TGG | - | chr7.1:59454774-59454793 | None:intergenic | 25.0% |
| !! | GATCTAGATTTTATGACAAA+TGG | - | chr7.1:59453338-59453357 | None:intergenic | 25.0% |
| !! | GTTCAAATATTTGTTGAGAA+AGG | - | chr7.1:59453552-59453571 | None:intergenic | 25.0% |
| !! | TGTATGTGTCTTAATTTTAG+TGG | + | chr7.1:59454231-59454250 | MS.gene46550:intron | 25.0% |
| !! | TGTGATATTCTTTATTTCGT+GGG | + | chr7.1:59452966-59452985 | MS.gene46550:intron | 25.0% |
| !! | TTGTGATATTCTTTATTTCG+TGG | + | chr7.1:59452965-59452984 | MS.gene46550:intron | 25.0% |
| !!! | ATCAATTGTCATTTTACAAC+CGG | - | chr7.1:59454648-59454667 | None:intergenic | 25.0% |
| !!! | GATATTGTTTTGATACATTC+AGG | + | chr7.1:59458622-59458641 | MS.gene46550:intron | 25.0% |
| !!! | TCTAAGAGTATTACAAACAA+GGG | - | chr7.1:59454165-59454184 | None:intergenic | 25.0% |
| !!! | TTATACAATTTTTTGCTAGC+AGG | - | chr7.1:59457817-59457836 | None:intergenic | 25.0% |
| !!! | TTATTTTTGGGGGTTTTTTT+GGG | + | chr7.1:59452708-59452727 | MS.gene46550:intron | 25.0% |
| !!! | TTTATTTTTGGGGGTTTTTT+TGG | + | chr7.1:59452707-59452726 | MS.gene46550:intron | 25.0% |
| AAAACGACTACATACACAAA+TGG | + | chr7.1:59454959-59454978 | MS.gene46550:intron | 30.0% | |
| AACATTGATCATTGCAATCA+AGG | - | chr7.1:59453302-59453321 | None:intergenic | 30.0% | |
| AAGATGCATCTTGTTGATAT+AGG | - | chr7.1:59457162-59457181 | None:intergenic | 30.0% | |
| AAGCCTTAAATGCTCAAATT+GGG | - | chr7.1:59455499-59455518 | None:intergenic | 30.0% | |
| AAGTAGATTGGTAAAAACCT+TGG | - | chr7.1:59452505-59452524 | None:intergenic | 30.0% | |
| AGATACCTCTTTAACAAGTT+TGG | + | chr7.1:59457558-59457577 | MS.gene46550:intron | 30.0% | |
| AGCTGCACATAATTAAGAAA+TGG | - | chr7.1:59455427-59455446 | None:intergenic | 30.0% | |
| AGTTGGAAAATAAAAGGTGA+TGG | + | chr7.1:59454518-59454537 | MS.gene46550:intron | 30.0% | |
| AGTTTGATCAATTGATGTGA+AGG | - | chr7.1:59456576-59456595 | None:intergenic | 30.0% | |
| GAAATTAAAGAAGTCTAGTG+TGG | + | chr7.1:59458100-59458119 | MS.gene46550:intron | 30.0% | |
| GAAGGCTTATAAGAATTGTT+TGG | + | chr7.1:59457131-59457150 | MS.gene46550:intron | 30.0% | |
| GAAGTTGCATGAAAATATTG+GGG | + | chr7.1:59458673-59458692 | MS.gene46550:CDS | 30.0% | |
| GAATGGCAAAAAAATTCAGA+AGG | - | chr7.1:59456379-59456398 | None:intergenic | 30.0% | |
| GATTGTTGAGTTCAATAACA+AGG | - | chr7.1:59452449-59452468 | None:intergenic | 30.0% | |
| GTTCATTCTTTAGTGTATCA+TGG | + | chr7.1:59452770-59452789 | MS.gene46550:intron | 30.0% | |
| GTTGTTACAAATAGCTCAAT+TGG | + | chr7.1:59457358-59457377 | MS.gene46550:intron | 30.0% | |
| TCATGGATTTGAATTCTCTA+CGG | + | chr7.1:59455313-59455332 | MS.gene46550:intron | 30.0% | |
| TGAATCTACGAAGCATAAAA+AGG | + | chr7.1:59453010-59453029 | MS.gene46550:intron | 30.0% | |
| TGACTATCATGTACAAAAGA+AGG | - | chr7.1:59456175-59456194 | None:intergenic | 30.0% | |
| TGAGACAAAAGAGAATAACA+TGG | - | chr7.1:59456606-59456625 | None:intergenic | 30.0% | |
| TGGACAAAAGAAAAGTAGAT+TGG | - | chr7.1:59452517-59452536 | None:intergenic | 30.0% | |
| TTATGACTAGAATCTCATTC+TGG | - | chr7.1:59453685-59453704 | None:intergenic | 30.0% | |
| TTCTATCATGAAAGTCAGAT+TGG | - | chr7.1:59453208-59453227 | None:intergenic | 30.0% | |
| TTGAACTATTACTTATCACC+AGG | + | chr7.1:59457394-59457413 | MS.gene46550:intron | 30.0% | |
| ! | AACAAGATGCATCTTCTTTT+CGG | + | chr7.1:59457167-59457186 | MS.gene46550:intron | 30.0% |
| ! | CAGATAGTGATAATTTTTCC+AGG | + | chr7.1:59454753-59454772 | MS.gene46550:intron | 30.0% |
| ! | GATGGTTTGATTTATGTTTG+TGG | + | chr7.1:59456483-59456502 | MS.gene46550:CDS | 30.0% |
| !! | CAGCAAAAAACTACTTTTAG+AGG | - | chr7.1:59455906-59455925 | None:intergenic | 30.0% |
| !! | CTCTAAGAGTATTACAAACA+AGG | - | chr7.1:59454166-59454185 | None:intergenic | 30.0% |
| !!! | AAGTGAGACTTTTGAAATAG+TGG | - | chr7.1:59458278-59458297 | None:intergenic | 30.0% |
| !!! | AGTAGTTCAAGTTTTGAACA+TGG | + | chr7.1:59456527-59456546 | MS.gene46550:CDS | 30.0% |
| !!! | TATTTTTGGGGGTTTTTTTG+GGG | + | chr7.1:59452709-59452728 | MS.gene46550:intron | 30.0% |
| !!! | TCAAGTTTTGAACATGGTAT+TGG | + | chr7.1:59456533-59456552 | MS.gene46550:CDS | 30.0% |
| AAGGAAATCTATGCCTTCTT+TGG | - | chr7.1:59456208-59456227 | None:intergenic | 35.0% | |
| ACAAATAGCTCAATTGGTAG+TGG | + | chr7.1:59457364-59457383 | MS.gene46550:intron | 35.0% | |
| ACATGAGAGAAAAATGCTAG+AGG | - | chr7.1:59455024-59455043 | None:intergenic | 35.0% | |
| ACATGATTATAAGGGAGAGT+TGG | + | chr7.1:59454501-59454520 | MS.gene46550:intron | 35.0% | |
| ACTATGGAGTTCTTATGGAA+TGG | - | chr7.1:59457197-59457216 | None:intergenic | 35.0% | |
| AGGGAGAGTTGGAAAATAAA+AGG | + | chr7.1:59454512-59454531 | MS.gene46550:intron | 35.0% | |
| AGTACTCTGAATAAGAGTCA+TGG | + | chr7.1:59455296-59455315 | MS.gene46550:intron | 35.0% | |
| AGTGAGTGTCCAACAAAAAA+AGG | + | chr7.1:59457604-59457623 | MS.gene46550:intron | 35.0% | |
| ATCAAAGTTATCATCTCTGC+AGG | + | chr7.1:59456422-59456441 | MS.gene46550:intron | 35.0% | |
| ATGTGACTAAGTCTACTGAA+AGG | - | chr7.1:59453603-59453622 | None:intergenic | 35.0% | |
| ATTACTTATCACCAGGTACT+AGG | + | chr7.1:59457401-59457420 | MS.gene46550:intron | 35.0% | |
| CAAGCCTTAAATGCTCAAAT+TGG | - | chr7.1:59455500-59455519 | None:intergenic | 35.0% | |
| CGCTTTACATGTTCTCATAA+AGG | + | chr7.1:59453416-59453435 | MS.gene46550:intron | 35.0% | |
| CTATGGAGTTCTTATGGAAT+GGG | - | chr7.1:59457196-59457215 | None:intergenic | 35.0% | |
| GAATTATCTCACTTCTCAGA+AGG | - | chr7.1:59456227-59456246 | None:intergenic | 35.0% | |
| GCTTAACTATGGAGTTCTTA+TGG | - | chr7.1:59457202-59457221 | None:intergenic | 35.0% | |
| GGTTAGATGTAGTCAATTGT+AGG | + | chr7.1:59455338-59455357 | MS.gene46550:intron | 35.0% | |
| TAAGTTCAAATCTCCTCAAC+CGG | + | chr7.1:59454626-59454645 | MS.gene46550:intron | 35.0% | |
| TAGATAATTCCTCGAAGAGT+TGG | - | chr7.1:59453510-59453529 | None:intergenic | 35.0% | |
| TAGCCCAATTTGAGCATTTA+AGG | + | chr7.1:59455493-59455512 | MS.gene46550:CDS | 35.0% | |
| TCTCAAGAAATCCAGATCTT+TGG | + | chr7.1:59452559-59452578 | MS.gene46550:intron | 35.0% | |
| TGAAACTTCTTAACCAACCT+AGG | - | chr7.1:59456633-59456652 | None:intergenic | 35.0% | |
| TGTGACTAAGTCTACTGAAA+GGG | - | chr7.1:59453602-59453621 | None:intergenic | 35.0% | |
| TTATGCTTCGTAGATTCACA+GGG | - | chr7.1:59453008-59453027 | None:intergenic | 35.0% | |
| TTCAGGAAGATGAAACAACT+TGG | + | chr7.1:59458639-59458658 | MS.gene46550:intron | 35.0% | |
| TTTATGCTTCGTAGATTCAC+AGG | - | chr7.1:59453009-59453028 | None:intergenic | 35.0% | |
| TTTGTGATATGCAAGTGAGA+TGG | - | chr7.1:59453362-59453381 | None:intergenic | 35.0% | |
| ! | AAACTTACCAAGAGCACAAT+AGG | - | chr7.1:59455955-59455974 | None:intergenic | 35.0% |
| ! | AACATGGTATTGGAAAGTGT+TGG | + | chr7.1:59456543-59456562 | MS.gene46550:CDS | 35.0% |
| ! | CAAATAGCTCAATTGGTAGT+GGG | + | chr7.1:59457365-59457384 | MS.gene46550:intron | 35.0% |
| ! | CATAATAAAGGTGCAAGTTC+CGG | - | chr7.1:59454031-59454050 | None:intergenic | 35.0% |
| ! | CATGTTTTCTTTACAGTGTG+TGG | + | chr7.1:59455039-59455058 | MS.gene46550:intron | 35.0% |
| ! | CTTTTGTACATGATAGTCAC+AGG | + | chr7.1:59456176-59456195 | MS.gene46550:intron | 35.0% |
| ! | TAACAACCCAGACAACTTTT+AGG | - | chr7.1:59457345-59457364 | None:intergenic | 35.0% |
| ! | TAAGAGGATTGGGTTATTTC+CGG | + | chr7.1:59454009-59454028 | MS.gene46550:intron | 35.0% |
| ! | TTGACAGTTTTCAGCATGTT+TGG | - | chr7.1:59456760-59456779 | None:intergenic | 35.0% |
| !! | TGACACCAAACTTGTTAAAG+AGG | - | chr7.1:59457566-59457585 | None:intergenic | 35.0% |
| AACTCAACAATCCTGATCTC+AGG | + | chr7.1:59452457-59452476 | MS.gene46550:CDS | 40.0% | |
| AAGATGAAACAACTTGGAGC+TGG | + | chr7.1:59458645-59458664 | MS.gene46550:CDS | 40.0% | |
| AAGCTTGTGAGTAATAGTGC+CGG | + | chr7.1:59457470-59457489 | MS.gene46550:intron | 40.0% | |
| AAGTCAAGCACGCTTAACTA+TGG | - | chr7.1:59457213-59457232 | None:intergenic | 40.0% | |
| ACATGTAATCCAACTCTTCG+AGG | + | chr7.1:59453498-59453517 | MS.gene46550:intron | 40.0% | |
| ACTCAACAATCCTGATCTCA+GGG | + | chr7.1:59452458-59452477 | MS.gene46550:CDS | 40.0% | |
| ACTTGGAGTAGTCTTTGGAT+GGG | + | chr7.1:59457229-59457248 | MS.gene46550:intron | 40.0% | |
| AGATGAAACAACTTGGAGCT+GGG | + | chr7.1:59458646-59458665 | MS.gene46550:CDS | 40.0% | |
| AGATTCAACAGCGGAATAGT+AGG | - | chr7.1:59454796-59454815 | None:intergenic | 40.0% | |
| ATAGTTAAGCGTGCTTGACT+TGG | + | chr7.1:59457212-59457231 | MS.gene46550:intron | 40.0% | |
| ATGAGATACTGTAACACCCA+CGG | + | chr7.1:59456971-59456990 | MS.gene46550:intron | 40.0% | |
| CGGAACTTGCACCTTTATTA+TGG | + | chr7.1:59454029-59454048 | MS.gene46550:CDS | 40.0% | |
| GGATTACATGTGTGTGTTCA+GGG | - | chr7.1:59453489-59453508 | None:intergenic | 40.0% | |
| GGCAATCCTAAAAGTTGTCT+GGG | + | chr7.1:59457336-59457355 | MS.gene46550:intron | 40.0% | |
| GGGCTTGCAATGCATTAAAA+AGG | + | chr7.1:59456728-59456747 | MS.gene46550:intron | 40.0% | |
| GTATGGGACTACATAGTTGA+AGG | + | chr7.1:59457109-59457128 | MS.gene46550:intron | 40.0% | |
| GTGACTAAGTCTACTGAAAG+GGG | - | chr7.1:59453601-59453620 | None:intergenic | 40.0% | |
| GTTCTTTGCTTTAGTACCTC+TGG | + | chr7.1:59454129-59454148 | MS.gene46550:intron | 40.0% | |
| TAAAGAAGTCTAGTGTGGAC+AGG | + | chr7.1:59458105-59458124 | MS.gene46550:intron | 40.0% | |
| TCACAACTTCTCCAAAGATC+TGG | - | chr7.1:59452573-59452592 | None:intergenic | 40.0% | |
| TCACAGGTTAACACCAAAGA+AGG | + | chr7.1:59456192-59456211 | MS.gene46550:intron | 40.0% | |
| TGAAAATATTGGGGTGAACC+AGG | + | chr7.1:59458682-59458701 | MS.gene46550:CDS | 40.0% | |
| TGGATTACATGTGTGTGTTC+AGG | - | chr7.1:59453490-59453509 | None:intergenic | 40.0% | |
| TTCTTAAGTTTGAAGGGTCG+TGG | - | chr7.1:59458430-59458449 | None:intergenic | 40.0% | |
| TTGCAATCCTATTGTGCTCT+TGG | + | chr7.1:59455945-59455964 | MS.gene46550:intron | 40.0% | |
| TTTGTCTCAACATCCTAGGT+TGG | + | chr7.1:59456617-59456636 | MS.gene46550:intron | 40.0% | |
| ! | CTCTTTTGTCTCAACATCCT+AGG | + | chr7.1:59456613-59456632 | MS.gene46550:CDS | 40.0% |
| ! | TGACCTACCGGGAAATTTTT+CGG | + | chr7.1:59457252-59457271 | MS.gene46550:intron | 40.0% |
| ! | TTCAATAACAAGGCGTTCCA+TGG | - | chr7.1:59452439-59452458 | None:intergenic | 40.0% |
| !! | AAAGACTCGTGTTGGTTTGT+AGG | + | chr7.1:59457306-59457325 | MS.gene46550:intron | 40.0% |
| !! | AAGACTCGTGTTGGTTTGTA+GGG | + | chr7.1:59457307-59457326 | MS.gene46550:intron | 40.0% |
| !! | CAAGTTTGGTGTCACACTTA+TGG | + | chr7.1:59457572-59457591 | MS.gene46550:intron | 40.0% |
| !! | CAATGTTCTGGAACTACTTC+AGG | + | chr7.1:59454843-59454862 | MS.gene46550:CDS | 40.0% |
| !! | CATTTAAGGCTTGCTAGTCT+TGG | + | chr7.1:59455507-59455526 | MS.gene46550:CDS | 40.0% |
| !! | GGTGAGGATTTTGAGTCTAT+TGG | + | chr7.1:59458390-59458409 | MS.gene46550:intron | 40.0% |
| !!! | TGTCATTTTACAACCGGTTG+AGG | - | chr7.1:59454642-59454661 | None:intergenic | 40.0% |
| AACTCGAGTGTGCAATGTTC+TGG | + | chr7.1:59454831-59454850 | MS.gene46550:CDS | 45.0% | |
| ACGCTCACCGAAAAATTTCC+CGG | - | chr7.1:59457262-59457281 | None:intergenic | 45.0% | |
| AGCTTGTGAGTAATAGTGCC+GGG | + | chr7.1:59457471-59457490 | MS.gene46550:intron | 45.0% | |
| ATCCTAAGGCTGTGTAGGTA+TGG | + | chr7.1:59457092-59457111 | MS.gene46550:intron | 45.0% | |
| CCTCTCATTCCGATGTGATT+CGG | - | chr7.1:59457071-59457090 | None:intergenic | 45.0% | |
| CGAATCACATCGGAATGAGA+GGG | + | chr7.1:59457069-59457088 | MS.gene46550:intron | 45.0% | |
| CGGCAATCCTAAAAGTTGTC+TGG | + | chr7.1:59457335-59457354 | MS.gene46550:intron | 45.0% | |
| CTAGAGGAACCGAATCACAT+CGG | + | chr7.1:59457059-59457078 | MS.gene46550:intron | 45.0% | |
| GACTTGGAGTAGTCTTTGGA+TGG | + | chr7.1:59457228-59457247 | MS.gene46550:intron | 45.0% | |
| GCCTGAGTAAGATTCAACAG+CGG | - | chr7.1:59454805-59454824 | None:intergenic | 45.0% | |
| GGATTTGAATTCTCTACGGC+TGG | + | chr7.1:59455317-59455336 | MS.gene46550:intron | 45.0% | |
| GGCGAAAAACACAACAGTAG+TGG | + | chr7.1:59454278-59454297 | MS.gene46550:intron | 45.0% | |
| GGGACTACATAGTTGAAGGA+AGG | + | chr7.1:59457113-59457132 | MS.gene46550:intron | 45.0% | |
| TCACCGAAAAATTTCCCGGT+AGG | - | chr7.1:59457258-59457277 | None:intergenic | 45.0% | |
| TCCGCTGTTGAATCTTACTC+AGG | + | chr7.1:59454801-59454820 | MS.gene46550:CDS | 45.0% | |
| TCCTAAGGCTGTGTAGGTAT+GGG | + | chr7.1:59457093-59457112 | MS.gene46550:intron | 45.0% | |
| TCTTGGAGTCATTGGTGCAT+TGG | + | chr7.1:59455524-59455543 | MS.gene46550:CDS | 45.0% | |
| ! | AGTCATTGGTGCATTGGTGA+AGG | + | chr7.1:59455530-59455549 | MS.gene46550:CDS | 45.0% |
| ! | CAAGGGAAATAGTTTGCCAG+AGG | - | chr7.1:59454148-59454167 | None:intergenic | 45.0% |
| ! | CTAACTCGCTTGTCGTTTGA+AGG | - | chr7.1:59455476-59455495 | None:intergenic | 45.0% |
| ! | TCGCTTGTCGTTTGAAGGAA+TGG | - | chr7.1:59455471-59455490 | None:intergenic | 45.0% |
| !! | AGAGCATTTTCCCTGAGATC+AGG | - | chr7.1:59452471-59452490 | None:intergenic | 45.0% |
| !! | CACAAGAAGTACTTACGCGA+AGG | - | chr7.1:59456795-59456814 | None:intergenic | 45.0% |
| !! | CTGCACTGTCACACTAGTTT+TGG | + | chr7.1:59452660-59452679 | MS.gene46550:intron | 45.0% |
| !! | CTTGCTAGTCTTGGAGTCAT+TGG | + | chr7.1:59455516-59455535 | MS.gene46550:CDS | 45.0% |
| !! | GCTTGACTTGGAGTAGTCTT+TGG | + | chr7.1:59457224-59457243 | MS.gene46550:intron | 45.0% |
| !! | TGTTGGTTTGTAGGGTCAGT+CGG | + | chr7.1:59457315-59457334 | MS.gene46550:intron | 45.0% |
| !!! | ATTTTATTGTTTTTATTTTT+GGG | + | chr7.1:59452696-59452715 | MS.gene46550:intron | 5.0% |
| !!! | TATTTTATTGTTTTTATTTT+TGG | + | chr7.1:59452695-59452714 | MS.gene46550:intron | 5.0% |
| AACCAGGTTCCCTTAGTACC+AGG | + | chr7.1:59458698-59458717 | MS.gene46550:CDS | 50.0% | |
| ACAACTGAGCTACAGCCTCT+TGG | - | chr7.1:59454577-59454596 | None:intergenic | 50.0% | |
| AGCACAAAGCATGGCATCCA+TGG | + | chr7.1:59452419-59452438 | MS.gene46550:CDS | 50.0% | |
| ATTCCCTCCACCTGGTACTA+AGG | - | chr7.1:59458711-59458730 | None:intergenic | 50.0% | |
| CACGCTGAAAAGACTCGTGT+TGG | + | chr7.1:59457298-59457317 | MS.gene46550:intron | 50.0% | |
| CCGAATCACATCGGAATGAG+AGG | + | chr7.1:59457068-59457087 | MS.gene46550:intron | 50.0% | |
| GCTTGTGAGTAATAGTGCCG+GGG | + | chr7.1:59457472-59457491 | MS.gene46550:intron | 50.0% | |
| GGTACTAGGTTCGATTCCCA+CGG | + | chr7.1:59457415-59457434 | MS.gene46550:intron | 50.0% | |
| GTACTAGGTTCGATTCCCAC+GGG | + | chr7.1:59457416-59457435 | MS.gene46550:intron | 50.0% | |
| GTATCTGTAACAGCCCTGCA+GGG | - | chr7.1:59457544-59457563 | None:intergenic | 50.0% | |
| TAGCACCACAGCACAAAGCA+TGG | + | chr7.1:59452410-59452429 | MS.gene46550:CDS | 50.0% | |
| TCCCATACCTACACAGCCTT+AGG | - | chr7.1:59457097-59457116 | None:intergenic | 50.0% | |
| TCGGAATGAGAGGGATCCTA+AGG | + | chr7.1:59457078-59457097 | MS.gene46550:intron | 50.0% | |
| TCTTTGGATGGGTGACCTAC+CGG | + | chr7.1:59457240-59457259 | MS.gene46550:intron | 50.0% | |
| TGCCTACGCAGCATGGAAAT+CGG | + | chr7.1:59456252-59456271 | MS.gene46550:CDS | 50.0% | |
| TGCTCTTCGTGTTCTCTCCA+AGG | + | chr7.1:59452485-59452504 | MS.gene46550:CDS | 50.0% | |
| TGGGAATCGAACCTAGTACC+TGG | - | chr7.1:59457415-59457434 | None:intergenic | 50.0% | |
| TTCCCTCCACCTGGTACTAA+GGG | - | chr7.1:59458710-59458729 | None:intergenic | 50.0% | |
| TTCCCTTAGTACCAGGTGGA+GGG | + | chr7.1:59458705-59458724 | MS.gene46550:CDS | 50.0% | |
| ! | CGGTTCCTCTAGAAACTGTC+AGG | - | chr7.1:59457051-59457070 | None:intergenic | 50.0% |
| ! | CTTGTGAGTAATAGTGCCGG+GGG | + | chr7.1:59457473-59457492 | MS.gene46550:intron | 50.0% |
| ! | TTGTGCTGTGGTGCTAGACT+GGG | - | chr7.1:59452406-59452425 | None:intergenic | 50.0% |
| ! | TTTGTGCTGTGGTGCTAGAC+TGG | - | chr7.1:59452407-59452426 | None:intergenic | 50.0% |
| !! | AGTAGTGTTTTTGCCTCCCG+TGG | - | chr7.1:59457435-59457454 | None:intergenic | 50.0% |
| !! | GTAGTGTTTTTGCCTCCCGT+GGG | - | chr7.1:59457434-59457453 | None:intergenic | 50.0% |
| CACCTGGTACTAAGGGAACC+TGG | - | chr7.1:59458703-59458722 | None:intergenic | 55.0% | |
| CAGGTTCCCTTAGTACCAGG+TGG | + | chr7.1:59458701-59458720 | MS.gene46550:CDS | 55.0% | |
| CATTGTCGTGCCTTGTGCAC+CGG | - | chr7.1:59457021-59457040 | None:intergenic | 55.0% | |
| CTTTGGATGGGTGACCTACC+GGG | + | chr7.1:59457241-59457260 | MS.gene46550:intron | 55.0% | |
| GACTGGGATGAAGCAGTTCG+AGG | - | chr7.1:59452390-59452409 | None:intergenic | 55.0% | |
| GAGGGATCCTAAGGCTGTGT+AGG | + | chr7.1:59457087-59457106 | MS.gene46550:intron | 55.0% | |
| GGATGCCATGCTTTGTGCTG+TGG | - | chr7.1:59452418-59452437 | None:intergenic | 55.0% | |
| GGTATCTGTAACAGCCCTGC+AGG | - | chr7.1:59457545-59457564 | None:intergenic | 55.0% | |
| GTTCCCTTAGTACCAGGTGG+AGG | + | chr7.1:59458704-59458723 | MS.gene46550:CDS | 55.0% | |
| TCCACTATGCCTACGCAGCA+TGG | + | chr7.1:59456245-59456264 | MS.gene46550:CDS | 55.0% | |
| TCCATGCTGCGTAGGCATAG+TGG | - | chr7.1:59456249-59456268 | None:intergenic | 55.0% | |
| ! | CGGCTCCTGACAGTTTCTAG+AGG | + | chr7.1:59457043-59457062 | MS.gene46550:intron | 55.0% |
| ! | TAATAGTGCCGGGGGTCGTA+AGG | + | chr7.1:59457481-59457500 | MS.gene46550:intron | 55.0% |
| !! | TGCCGATTTCCATGCTGCGT+AGG | - | chr7.1:59456257-59456276 | None:intergenic | 55.0% |
| CTAGGTTCGATTCCCACGGG+AGG | + | chr7.1:59457419-59457438 | MS.gene46550:intron | 60.0% | |
| CTGTAACAGCCCTGCAGGGT+GGG | - | chr7.1:59457540-59457559 | None:intergenic | 60.0% | |
| GCACAAGGCACGACAATGCG+CGG | + | chr7.1:59457023-59457042 | MS.gene46550:intron | 60.0% | |
| GTGCCACCAAGGTGTGCATG+CGG | + | chr7.1:59457512-59457531 | MS.gene46550:intron | 60.0% | |
| TCTGTAACAGCCCTGCAGGG+TGG | - | chr7.1:59457541-59457560 | None:intergenic | 60.0% | |
| TGCCACCAAGGTGTGCATGC+GGG | + | chr7.1:59457513-59457532 | MS.gene46550:intron | 60.0% | |
| TTTCGGTGAGCGTGCGAGTG+AGG | + | chr7.1:59457269-59457288 | MS.gene46550:intron | 60.0% | |
| ! | CATGCACACCTTGGTGGCAC+CGG | - | chr7.1:59457512-59457531 | None:intergenic | 60.0% |
| ACCCACGGCTGACGAGAGCA+GGG | + | chr7.1:59456986-59457005 | MS.gene46550:intron | 65.0% | |
| GAGAGCAGGGGAGTGATCGC+CGG | + | chr7.1:59456999-59457018 | MS.gene46550:intron | 65.0% | |
| GGAGTGATCGCCGGTGCACA+AGG | + | chr7.1:59457008-59457027 | MS.gene46550:intron | 65.0% | |
| GTCCCGCATGCACACCTTGG+TGG | - | chr7.1:59457518-59457537 | None:intergenic | 65.0% | |
| TGGGTCCCGCATGCACACCT+TGG | - | chr7.1:59457521-59457540 | None:intergenic | 65.0% | |
| CACCCACGGCTGACGAGAGC+AGG | + | chr7.1:59456985-59457004 | MS.gene46550:intron | 70.0% | |
| CATGCGGGACCCACCCTGCA+GGG | + | chr7.1:59457528-59457547 | MS.gene46550:intron | 70.0% | |
| CCCACGGCTGACGAGAGCAG+GGG | + | chr7.1:59456987-59457006 | MS.gene46550:intron | 70.0% | |
| CCCCTGCTCTCGTCAGCCGT+GGG | - | chr7.1:59456990-59457009 | None:intergenic | 70.0% | |
| TCCCCTGCTCTCGTCAGCCG+TGG | - | chr7.1:59456991-59457010 | None:intergenic | 70.0% | |
| CGGCCTCGCCTTACGACCCC+CGG | - | chr7.1:59457492-59457511 | None:intergenic | 75.0% | |
| CGGGGGTCGTAAGGCGAGGC+CGG | + | chr7.1:59457490-59457509 | MS.gene46550:intron | 75.0% | |
| GCATGCGGGACCCACCCTGC+AGG | + | chr7.1:59457527-59457546 | MS.gene46550:intron | 75.0% | |
| GTGCCGGGGGTCGTAAGGCG+AGG | + | chr7.1:59457486-59457505 | MS.gene46550:intron | 75.0% | |
| !! | AGGCGAGGCCGGTGCCACCA+AGG | + | chr7.1:59457501-59457520 | MS.gene46550:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 59452360 | 59458736 | 59452360 | ID=MS.gene46550 |
| chr7.1 | mRNA | 59452360 | 59458736 | 59452360 | ID=MS.gene46550.t1;Parent=MS.gene46550 |
| chr7.1 | exon | 59452360 | 59452506 | 59452360 | ID=MS.gene46550.t1.exon1;Parent=MS.gene46550.t1 |
| chr7.1 | CDS | 59452360 | 59452506 | 59452360 | ID=cds.MS.gene46550.t1;Parent=MS.gene46550.t1 |
| chr7.1 | exon | 59454013 | 59454084 | 59454013 | ID=MS.gene46550.t1.exon2;Parent=MS.gene46550.t1 |
| chr7.1 | CDS | 59454013 | 59454084 | 59454013 | ID=cds.MS.gene46550.t1;Parent=MS.gene46550.t1 |
| chr7.1 | exon | 59454775 | 59454864 | 59454775 | ID=MS.gene46550.t1.exon3;Parent=MS.gene46550.t1 |
| chr7.1 | CDS | 59454775 | 59454864 | 59454775 | ID=cds.MS.gene46550.t1;Parent=MS.gene46550.t1 |
| chr7.1 | exon | 59455055 | 59455097 | 59455055 | ID=MS.gene46550.t1.exon4;Parent=MS.gene46550.t1 |
| chr7.1 | CDS | 59455055 | 59455097 | 59455055 | ID=cds.MS.gene46550.t1;Parent=MS.gene46550.t1 |
| chr7.1 | exon | 59455445 | 59455551 | 59455445 | ID=MS.gene46550.t1.exon5;Parent=MS.gene46550.t1 |
| chr7.1 | CDS | 59455445 | 59455551 | 59455445 | ID=cds.MS.gene46550.t1;Parent=MS.gene46550.t1 |
| chr7.1 | exon | 59456198 | 59456293 | 59456198 | ID=MS.gene46550.t1.exon6;Parent=MS.gene46550.t1 |
| chr7.1 | CDS | 59456198 | 59456293 | 59456198 | ID=cds.MS.gene46550.t1;Parent=MS.gene46550.t1 |
| chr7.1 | exon | 59456444 | 59456634 | 59456444 | ID=MS.gene46550.t1.exon7;Parent=MS.gene46550.t1 |
| chr7.1 | CDS | 59456444 | 59456634 | 59456444 | ID=cds.MS.gene46550.t1;Parent=MS.gene46550.t1 |
| chr7.1 | exon | 59456729 | 59456798 | 59456729 | ID=MS.gene46550.t1.exon8;Parent=MS.gene46550.t1 |
| chr7.1 | CDS | 59456729 | 59456798 | 59456729 | ID=cds.MS.gene46550.t1;Parent=MS.gene46550.t1 |
| chr7.1 | exon | 59458644 | 59458736 | 59458644 | ID=MS.gene46550.t1.exon9;Parent=MS.gene46550.t1 |
| chr7.1 | CDS | 59458644 | 59458736 | 59458644 | ID=cds.MS.gene46550.t1;Parent=MS.gene46550.t1 |
| Gene Sequence |
| Protein sequence |
