AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene46586

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene46586.t1 MTR_5g078140 72.973 148 37 1 2 146 1 148 8.62e-75 226
MS.gene46586.t1 MTR_3g065440 77.536 138 26 1 2 134 1 138 2.29e-73 223
MS.gene46586.t1 MTR_4g102380 74.242 132 34 0 2 133 1 132 8.15e-70 212
MS.gene46586.t1 MTR_7g076740 68.182 132 41 1 2 132 1 132 3.12e-63 196
MS.gene46586.t1 MTR_8g031360 68.889 135 40 2 2 134 1 135 3.00e-62 194
MS.gene46586.t1 MTR_7g011170 61.806 144 55 0 2 145 1 144 9.02e-62 193
MS.gene46586.t1 MTR_4g478180 62.179 156 50 2 2 150 2 155 1.26e-61 194
MS.gene46586.t1 MTR_6g012690 67.969 128 41 0 2 129 1 128 2.33e-61 193
MS.gene46586.t1 MTR_3g074520 66.406 128 43 0 2 129 1 128 3.23e-60 190
MS.gene46586.t1 MTR_1g085040 56.173 162 68 2 2 163 1 159 9.66e-60 189
MS.gene46586.t1 MTR_4g073420 58.108 148 60 1 2 147 1 148 3.36e-59 186
MS.gene46586.t1 MTR_4g082290 66.406 128 43 0 2 129 1 128 4.71e-59 189
MS.gene46586.t1 MTR_4g091490 66.667 129 42 1 2 129 1 129 9.81e-59 187
MS.gene46586.t1 MTR_5g029840 55.556 162 67 1 2 158 1 162 1.56e-58 185
MS.gene46586.t1 MTR_3g461490 62.595 131 49 0 2 132 1 131 1.73e-58 185
MS.gene46586.t1 MTR_2g011660 65.891 129 43 1 2 129 1 129 2.35e-58 185
MS.gene46586.t1 MTR_3g097450 62.222 135 51 0 2 136 1 135 2.45e-58 184
MS.gene46586.t1 MTR_2g089620 66.406 128 43 0 2 129 1 128 4.76e-58 184
MS.gene46586.t1 MTR_8g095390 62.308 130 49 0 2 131 1 130 3.19e-57 181
MS.gene46586.t1 MTR_7g110830 58.904 146 60 0 2 147 1 146 3.56e-57 183
MS.gene46586.t1 MTR_6g009430 57.639 144 61 0 2 145 1 144 1.47e-56 180
MS.gene46586.t1 MTR_3g077110 61.765 136 52 0 2 137 1 136 2.73e-56 180
MS.gene46586.t1 MTR_1g112760 64.567 127 45 0 4 130 4 130 2.91e-56 176
MS.gene46586.t1 MTR_4g082230 64.062 128 46 0 2 129 1 128 5.56e-56 181
MS.gene46586.t1 MTR_4g105130 63.359 131 48 0 2 132 1 131 7.29e-56 179
MS.gene46586.t1 MTR_1g085640 58.865 141 58 0 2 142 1 141 1.04e-55 179
MS.gene46586.t1 MTR_1g076150 68.966 116 36 0 2 117 1 116 1.43e-55 176
MS.gene46586.t1 MTR_5g007370 57.718 149 63 0 2 150 1 149 2.58e-55 176
MS.gene46586.t1 MTR_1g100653 55.705 149 57 1 2 150 1 140 3.10e-55 176
MS.gene46586.t1 MTR_7g111290 60.403 149 57 1 2 150 1 147 4.66e-55 178
MS.gene46586.t1 MTR_7g096930 61.314 137 53 0 2 138 1 137 2.06e-54 173
MS.gene46586.t1 MTR_5g079670 60.800 125 49 0 4 128 2 126 1.03e-53 169
MS.gene46586.t1 MTR_3g083540 64.800 125 44 0 6 130 34 158 1.19e-53 172
MS.gene46586.t1 MTR_2g034790 61.719 128 48 1 2 129 1 127 1.53e-53 172
MS.gene46586.t1 MTR_7g117730 65.812 117 40 0 2 118 1 117 1.43e-52 168
MS.gene46586.t1 MTR_1g043080 65.517 116 40 0 2 117 1 116 1.58e-52 167
MS.gene46586.t1 MTR_2g099740 67.241 116 38 0 2 117 1 116 2.55e-52 171
MS.gene46586.t1 MTR_7g115650 59.829 117 47 0 2 118 1 117 2.26e-51 163
MS.gene46586.t1 MTR_4g121460 64.655 116 41 0 2 117 1 116 2.83e-51 167
MS.gene46586.t1 MTR_2g067420 70.642 109 32 0 3 111 4 112 2.95e-51 166
MS.gene46586.t1 MTR_8g017440 60.976 123 48 0 2 124 1 123 5.92e-51 166
MS.gene46586.t1 MTR_8g027345 63.248 117 43 0 2 118 1 117 1.16e-50 164
MS.gene46586.t1 MTR_1g043050 60.938 128 46 1 2 129 1 124 1.20e-50 163
MS.gene46586.t1 MTR_2g064160 63.636 121 44 0 7 127 5 125 2.06e-50 164
MS.gene46586.t1 MTR_2g089450 62.069 116 44 0 2 117 1 116 3.34e-50 161
MS.gene46586.t1 MTR_0251s0050 49.324 148 74 1 2 148 1 148 4.63e-50 162
MS.gene46586.t1 MTR_7g010210 64.957 117 41 0 2 118 1 117 5.60e-50 162
MS.gene46586.t1 MTR_7g010210 64.957 117 41 0 2 118 1 117 5.63e-50 163
MS.gene46586.t1 MTR_4g485530 61.600 125 47 1 4 127 2 126 6.71e-50 159
MS.gene46586.t1 MTR_1g017000 51.592 157 66 4 2 151 1 154 7.47e-50 160
MS.gene46586.t1 MTR_0008s0390 60.345 116 45 1 2 116 1 116 1.23e-49 160
MS.gene46586.t1 MTR_7g087130 56.164 146 62 2 2 145 1 146 1.30e-49 162
MS.gene46586.t1 MTR_7g109320 60.606 132 51 1 2 132 1 132 1.57e-49 163
MS.gene46586.t1 MTR_8g098860 62.393 117 44 0 2 118 1 117 2.27e-49 161
MS.gene46586.t1 MTR_8g017540 63.793 116 42 0 2 117 47 162 2.32e-49 163
MS.gene46586.t1 MTR_0008s0470 58.621 116 47 1 2 116 1 116 2.56e-49 160
MS.gene46586.t1 MTR_4g065017 58.462 130 51 1 13 142 17 143 5.89e-49 160
MS.gene46586.t1 MTR_0140s0030 61.207 116 45 0 2 117 2 117 6.18e-49 160
MS.gene46586.t1 MTR_0489s0020 61.207 116 45 0 2 117 2 117 6.18e-49 160
MS.gene46586.t1 MTR_3g039990 61.538 117 45 0 2 118 2 118 1.13e-48 159
MS.gene46586.t1 MTR_8g017500 59.350 123 50 0 2 124 1 123 1.46e-48 160
MS.gene46586.t1 MTR_4g125520 63.866 119 43 0 2 120 1 119 2.29e-48 159
MS.gene46586.t1 MTR_2g089420 62.069 116 43 1 2 117 1 115 1.04e-47 160
MS.gene46586.t1 MTR_5g042030 59.664 119 48 0 11 129 5 123 2.94e-47 155
MS.gene46586.t1 MTR_5g014990 59.829 117 46 1 2 117 1 117 3.53e-47 155
MS.gene46586.t1 MTR_8g017390 62.393 117 43 1 2 117 1 117 6.41e-47 159
MS.gene46586.t1 MTR_5g010020 62.727 110 41 0 2 111 1 110 1.34e-46 155
MS.gene46586.t1 MTR_1g017140 50.318 157 72 3 2 157 1 152 2.57e-46 154
MS.gene46586.t1 MTR_2g097910 56.489 131 56 1 13 143 20 149 2.90e-46 153
MS.gene46586.t1 MTR_6g012180 62.727 110 41 0 2 111 1 110 4.09e-46 153
MS.gene46586.t1 MTR_3g103570 59.829 117 46 1 2 117 1 117 4.53e-46 154
MS.gene46586.t1 MTR_8g017340 62.393 117 43 1 2 117 1 117 7.45e-46 156
MS.gene46586.t1 MTR_4g057635 54.688 128 57 1 2 128 1 128 1.83e-45 151
MS.gene46586.t1 MTR_6g090405 60.345 116 45 1 2 116 1 116 2.19e-45 149
MS.gene46586.t1 MTR_8g017350 62.393 117 43 1 2 117 1 117 1.69e-44 155
MS.gene46586.t1 MTR_7g102110 57.265 117 49 1 2 117 1 117 3.82e-44 147
MS.gene46586.t1 MTR_8g042410 59.055 127 48 3 11 137 35 157 1.53e-43 151
MS.gene46586.t1 MTR_7g035075 61.321 106 41 0 13 118 14 119 2.18e-43 143
MS.gene46586.t1 MTR_0063s0090 57.522 113 48 0 2 114 1 113 2.39e-43 143
MS.gene46586.t1 MTR_1g100667 59.829 117 46 1 2 117 1 117 2.78e-43 144
MS.gene46586.t1 MTR_3g028740 60.909 110 43 0 9 118 18 127 3.12e-43 146
MS.gene46586.t1 MTR_6g006030 56.303 119 50 1 2 118 1 119 6.78e-43 142
MS.gene46586.t1 MTR_4g128670 58.559 111 45 1 2 111 1 111 9.59e-43 145
MS.gene46586.t1 MTR_1g110460 53.782 119 55 0 13 131 26 144 1.84e-42 143
MS.gene46586.t1 MTR_0008s0280 55.263 114 51 0 2 115 1 114 2.39e-42 141
MS.gene46586.t1 MTR_4g097570 59.091 110 44 1 2 110 1 110 5.41e-42 142
MS.gene46586.t1 MTR_1g086510 56.667 120 51 1 9 128 17 135 1.16e-41 140
MS.gene46586.t1 MTR_6g055910 47.973 148 74 2 2 147 1 147 1.44e-41 140
MS.gene46586.t1 MTR_2g095520 57.658 111 46 1 2 111 1 111 1.87e-41 141
MS.gene46586.t1 MTR_4g097570 58.559 111 44 2 2 110 1 111 3.96e-41 139
MS.gene46586.t1 MTR_2g033170 53.488 129 59 1 9 137 20 147 2.38e-40 138
MS.gene46586.t1 MTR_3g011610 57.407 108 46 0 11 118 35 142 8.21e-40 140
MS.gene46586.t1 MTR_1g045610 60.952 105 41 0 14 118 22 126 9.56e-40 135
MS.gene46586.t1 MTR_1g073170 60.952 105 41 0 14 118 21 125 1.10e-39 135
MS.gene46586.t1 MTR_4g100720 55.556 117 52 0 10 126 10 126 4.37e-39 131
MS.gene46586.t1 MTR_3g052450 54.630 108 49 0 9 116 36 143 4.95e-39 139
MS.gene46586.t1 MTR_1g086530 53.043 115 54 0 9 123 29 143 1.06e-38 133
MS.gene46586.t1 MTR_3g052430 55.769 104 46 0 13 116 41 144 1.21e-38 138
MS.gene46586.t1 MTR_3g045430 49.242 132 66 1 2 132 1 132 3.42e-38 132
MS.gene46586.t1 MTR_4g063100 56.311 103 45 0 14 116 8 110 4.59e-38 130
MS.gene46586.t1 MTR_4g123040 51.938 129 61 1 9 137 20 147 1.97e-37 130
MS.gene46586.t1 MTR_7g111290 65.000 100 33 1 44 143 1 98 5.01e-37 130
MS.gene46586.t1 MTR_2g096380 53.774 106 49 0 13 118 6 111 2.23e-36 125
MS.gene46586.t1 MTR_2g088170 57.009 107 46 0 10 116 26 132 2.66e-36 130
MS.gene46586.t1 MTR_1g021230 56.731 104 45 0 13 116 57 160 5.48e-36 129
MS.gene46586.t1 MTR_8g020490 55.660 106 47 0 13 118 8 113 8.13e-36 125
MS.gene46586.t1 MTR_0197s0010 57.009 107 46 0 17 123 5 111 1.20e-35 124
MS.gene46586.t1 MTR_1g062940 53.774 106 49 0 13 118 6 111 1.38e-35 123
MS.gene46586.t1 MTR_5g079120 53.211 109 51 0 9 117 57 165 2.60e-35 125
MS.gene46586.t1 MTR_0247s0040 49.533 107 54 0 8 114 2 108 1.81e-34 119
MS.gene46586.t1 MTR_5g078800 53.774 106 49 0 12 117 6 111 5.46e-34 120
MS.gene46586.t1 MTR_5g079290 52.830 106 50 0 12 117 16 121 5.69e-34 120
MS.gene46586.t1 MTR_7g017260 52.252 111 51 1 9 117 21 131 8.65e-34 120
MS.gene46586.t1 MTR_5g079220 50.909 110 54 0 8 117 16 125 8.75e-34 120
MS.gene46586.t1 MTR_5g062790 47.500 120 61 2 7 125 3 121 1.74e-33 120
MS.gene46586.t1 MTR_5g488170 44.138 145 70 5 14 152 13 152 2.43e-33 118
MS.gene46586.t1 MTR_0193s0090 48.113 106 55 0 12 117 6 111 2.53e-33 117
MS.gene46586.t1 MTR_5g088080 44.138 145 70 5 14 152 13 152 3.23e-33 118
MS.gene46586.t1 MTR_5g088150 44.138 145 70 5 14 152 13 152 3.23e-33 118
MS.gene46586.t1 MTR_5g488210 44.138 145 70 5 14 152 13 152 3.23e-33 118
MS.gene46586.t1 MTR_5g088640 44.138 145 70 5 14 152 13 152 5.09e-33 118
MS.gene46586.t1 MTR_5g078860 52.830 106 50 0 12 117 6 111 1.22e-32 118
MS.gene46586.t1 MTR_8g060940 40.373 161 86 1 12 162 6 166 3.09e-32 115
MS.gene46586.t1 MTR_5g078910 52.830 106 50 0 12 117 6 111 5.03e-32 116
MS.gene46586.t1 MTR_0001s0360 52.830 106 50 0 12 117 6 111 5.41e-32 115
MS.gene46586.t1 MTR_1g083630 47.934 121 62 1 2 122 1 120 5.66e-32 120
MS.gene46586.t1 MTR_5g078950 53.398 103 48 0 12 114 6 108 6.16e-32 115
MS.gene46586.t1 MTR_5g078930 50.450 111 54 1 7 116 2 112 2.02e-30 110
MS.gene46586.t1 MTR_5g007300 57.955 88 37 0 2 89 53 140 1.88e-29 105
MS.gene46586.t1 MTR_6g055910 65.753 73 25 0 44 116 16 88 2.57e-29 108
MS.gene46586.t1 MTR_5g016510 43.333 120 65 2 15 133 5 122 5.11e-29 108
MS.gene46586.t1 MTR_8g006470 45.133 113 61 1 9 120 6 118 2.74e-28 106
MS.gene46586.t1 MTR_4g063100 63.014 73 27 0 44 116 9 81 3.74e-28 104
MS.gene46586.t1 MTR_5g088610 45.000 120 64 2 7 125 3 121 4.31e-28 107
MS.gene46586.t1 MTR_5g049190 39.583 144 75 4 8 142 4 144 3.01e-27 102
MS.gene46586.t1 MTR_7g061330 49.074 108 52 2 13 119 111 216 3.29e-27 106
MS.gene46586.t1 MTR_7g461410 49.074 108 52 2 13 119 111 216 3.29e-27 106
MS.gene46586.t1 MTR_3g101290 41.406 128 72 2 15 140 37 163 3.47e-27 102
MS.gene46586.t1 MTR_6g074860 44.628 121 60 3 15 130 4 122 4.32e-27 102
MS.gene46586.t1 MTR_7g061330 49.074 108 52 2 13 119 75 180 6.31e-27 105
MS.gene46586.t1 MTR_6g015455 45.536 112 58 2 15 125 5 114 7.26e-27 105
MS.gene46586.t1 MTR_3g463400 44.444 117 61 3 2 116 119 233 8.08e-27 104
MS.gene46586.t1 MTR_4g094982 43.103 116 64 2 15 129 5 119 9.50e-27 102
MS.gene46586.t1 MTR_4g128190 46.667 105 42 2 12 115 10 101 1.15e-26 100
MS.gene46586.t1 MTR_4g029540 45.192 104 56 1 13 115 10 113 1.32e-26 102
MS.gene46586.t1 MTR_2g096380 58.667 75 31 0 44 118 18 92 7.13e-26 98.6
MS.gene46586.t1 MTR_5g070020 46.667 105 53 2 13 116 120 222 1.03e-25 100
MS.gene46586.t1 MTR_4g019370 44.737 114 56 3 15 127 38 145 1.03e-25 100
MS.gene46586.t1 MTR_3g110028 44.340 106 56 2 13 117 83 186 8.74e-25 100
MS.gene46586.t1 MTR_4g105660 43.636 110 59 2 10 118 175 282 1.86e-24 98.2
MS.gene46586.t1 MTR_5g041570 46.667 105 53 2 15 118 134 236 2.93e-24 97.8
MS.gene46586.t1 MTR_3g077650 41.284 109 61 2 10 117 176 282 5.43e-24 97.1
MS.gene46586.t1 MTR_1g026870 42.453 106 58 2 13 117 83 186 1.60e-23 96.3
MS.gene46586.t1 MTR_4g082040 44.340 106 56 2 14 118 104 207 1.99e-23 95.5
MS.gene46586.t1 MTR_5g082910 45.283 106 52 3 9 113 16 116 2.53e-23 93.2
MS.gene46586.t1 MTR_7g451170 43.689 103 55 2 15 116 191 291 1.65e-22 92.8
MS.gene46586.t1 MTR_6g027340 44.211 95 50 2 18 111 19 111 3.11e-22 88.6
MS.gene46586.t1 MTR_6g027360 44.000 100 53 2 13 111 76 173 4.20e-22 90.5
MS.gene46586.t1 MTR_7g037260 41.176 102 59 1 15 116 145 245 6.67e-22 90.5
MS.gene46586.t1 MTR_1g057980 42.424 99 56 1 13 111 78 175 9.65e-22 89.4
MS.gene46586.t1 MTR_1g085880 46.667 105 54 2 13 115 11 115 1.50e-21 86.7
MS.gene46586.t1 MTR_6g027370 42.991 107 58 2 15 120 99 203 2.18e-21 89.0
MS.gene46586.t1 MTR_4g088015 44.898 98 51 2 15 111 221 316 2.24e-21 89.7
MS.gene46586.t1 MTR_1g085770 46.667 105 54 2 13 115 11 115 5.15e-21 87.4
MS.gene46586.t1 MTR_7g035350 44.211 95 50 2 18 111 228 320 5.46e-21 88.6
MS.gene46586.t1 MTR_3g089045 44.954 109 57 2 9 116 10 116 2.58e-20 85.5
MS.gene46586.t1 MTR_7g450950 41.905 105 57 3 15 118 157 258 3.03e-20 85.9
MS.gene46586.t1 MTR_7g086960 40.171 117 62 3 1 116 80 189 1.44e-19 84.0
MS.gene46586.t1 MTR_5g010650 43.434 99 53 2 13 110 108 204 3.20e-19 84.0
MS.gene46586.t1 MTR_7g037130 38.144 97 59 1 15 111 145 240 3.12e-18 80.5
MS.gene46586.t1 MTR_0023s0210 50.000 78 39 0 12 89 6 83 3.67e-18 74.7
MS.gene46586.t1 MTR_7g061550 36.800 125 71 3 15 131 7 131 3.85e-16 74.7
MS.gene46586.t1 MTR_5g038910 35.780 109 69 1 18 126 29 136 7.27e-15 71.2
MS.gene46586.t1 MTR_5g038910 35.455 110 70 1 18 127 29 137 7.77e-15 71.2
MS.gene46586.t1 MTR_8g017480 55.769 52 23 0 2 53 1 52 4.84e-14 63.2
MS.gene46586.t1 MTR_8g468380 37.624 101 62 1 18 118 25 124 1.98e-13 67.0
MS.gene46586.t1 MTR_6g055910 58.696 46 19 0 71 116 2 47 4.33e-13 64.7
MS.gene46586.t1 MTR_4g063100 56.522 46 20 0 71 116 1 46 1.38e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene46586.t1 AT5G14340 73.292 161 40 1 1 161 12 169 1.22e-85 253
MS.gene46586.t1 AT5G16600 75.556 135 33 0 2 136 1 135 8.11e-75 227
MS.gene46586.t1 AT1G66230 65.823 158 51 1 2 159 1 155 6.63e-73 220
MS.gene46586.t1 AT4G22680 69.014 142 44 0 2 143 1 142 2.03e-70 214
MS.gene46586.t1 AT4G12350 70.229 131 39 0 2 132 1 131 3.74e-65 201
MS.gene46586.t1 AT3G61250 68.992 129 40 0 2 130 1 129 3.05e-62 194
MS.gene46586.t1 AT3G02940 67.969 128 41 0 2 129 1 128 1.03e-61 193
MS.gene46586.t1 AT3G02940 67.969 128 41 0 2 129 1 128 2.64e-61 192
MS.gene46586.t1 AT3G02940 67.969 128 41 0 2 129 1 128 2.64e-61 192
MS.gene46586.t1 AT5G15310 67.969 128 41 0 2 129 1 128 2.68e-61 190
MS.gene46586.t1 AT5G62320 60.784 153 51 2 3 148 3 153 3.65e-61 189
MS.gene46586.t1 AT5G15310 67.969 128 41 0 2 129 1 128 4.53e-61 192
MS.gene46586.t1 AT5G15310 67.969 128 41 0 2 129 1 128 6.76e-61 191
MS.gene46586.t1 AT3G01140 64.748 139 46 1 2 140 1 136 1.00e-60 191
MS.gene46586.t1 AT4G28110 65.625 128 44 0 2 129 1 128 3.26e-60 188
MS.gene46586.t1 AT4G38620 61.594 138 53 0 2 139 1 138 3.52e-60 188
MS.gene46586.t1 AT5G16770 66.406 128 43 0 2 129 1 128 4.83e-60 189
MS.gene46586.t1 AT5G16770 66.406 128 43 0 2 129 1 128 4.83e-60 189
MS.gene46586.t1 AT1G09540 65.000 140 49 0 2 141 1 140 4.85e-60 190
MS.gene46586.t1 AT5G16770 66.406 128 43 0 2 129 1 128 1.02e-59 189
MS.gene46586.t1 AT5G16770 66.406 128 43 0 2 129 1 128 1.02e-59 189
MS.gene46586.t1 AT4G21440 66.406 128 43 0 2 129 1 128 2.07e-59 188
MS.gene46586.t1 AT5G26660 57.669 163 64 2 2 163 1 159 5.02e-59 187
MS.gene46586.t1 AT2G16720 56.688 157 67 1 2 157 1 157 5.89e-59 184
MS.gene46586.t1 AT4G09460 63.158 133 49 0 2 134 1 133 9.97e-59 183
MS.gene46586.t1 AT4G34990 57.143 147 63 0 2 148 1 147 1.68e-58 183
MS.gene46586.t1 AT1G57560 62.222 135 51 0 2 136 1 135 1.71e-58 184
MS.gene46586.t1 AT4G17785 65.116 129 44 1 2 129 1 129 1.97e-58 186
MS.gene46586.t1 AT4G17785 65.116 129 44 1 2 129 1 129 2.68e-58 186
MS.gene46586.t1 AT5G65230 64.844 128 45 0 2 129 1 128 2.96e-58 184
MS.gene46586.t1 AT3G23250 60.690 145 55 1 2 146 1 143 5.02e-58 182
MS.gene46586.t1 AT1G34670 64.844 128 45 0 2 129 1 128 5.33e-58 185
MS.gene46586.t1 AT4G01680 61.594 138 53 0 2 139 1 138 8.22e-58 181
MS.gene46586.t1 AT5G56110 62.595 131 49 0 2 132 1 131 1.03e-57 183
MS.gene46586.t1 AT3G01140 63.971 136 46 1 5 140 47 179 1.40e-57 184
MS.gene46586.t1 AT1G57560 60.140 143 55 1 2 142 1 143 2.64e-57 182
MS.gene46586.t1 AT4G05100 64.341 129 45 1 2 129 1 129 5.57e-57 181
MS.gene46586.t1 AT5G10280 63.281 128 47 0 2 129 1 128 6.24e-57 181
MS.gene46586.t1 AT4G01680 61.594 138 53 0 2 139 1 138 7.82e-57 181
MS.gene46586.t1 AT3G13540 65.873 126 43 0 6 131 16 141 1.12e-56 178
MS.gene46586.t1 AT1G22640 61.364 132 51 0 2 133 1 132 3.33e-56 177
MS.gene46586.t1 AT1G35515 60.000 135 54 0 2 136 1 135 4.82e-56 175
MS.gene46586.t1 AT1G06180 69.828 116 35 0 2 117 1 116 6.79e-56 176
MS.gene46586.t1 AT1G16490 56.129 155 59 2 3 154 4 152 1.31e-55 176
MS.gene46586.t1 AT3G12820 71.053 114 33 0 4 117 5 118 1.66e-54 172
MS.gene46586.t1 AT2G31180 58.741 143 59 0 2 144 1 143 1.87e-54 172
MS.gene46586.t1 AT5G61420 56.552 145 62 1 2 145 1 145 3.18e-54 175
MS.gene46586.t1 AT5G60890 57.778 135 57 0 2 136 1 135 5.43e-54 172
MS.gene46586.t1 AT1G56160 56.129 155 67 1 3 157 4 157 6.08e-54 172
MS.gene46586.t1 AT1G79180 68.696 115 36 0 3 117 4 118 1.59e-53 171
MS.gene46586.t1 AT4G01680 56.667 150 53 1 2 139 1 150 3.28e-53 172
MS.gene46586.t1 AT5G07690 61.240 129 50 0 2 130 1 129 6.98e-53 171
MS.gene46586.t1 AT5G54230 63.281 128 47 0 2 129 1 128 2.43e-52 169
MS.gene46586.t1 AT5G49330 62.205 127 47 1 2 127 1 127 2.60e-52 170
MS.gene46586.t1 AT3G28470 59.542 131 53 0 2 132 1 131 6.24e-52 168
MS.gene46586.t1 AT2G47460 66.379 116 39 0 2 117 1 116 1.56e-51 168
MS.gene46586.t1 AT1G18570 58.219 146 57 2 2 143 1 146 2.14e-51 167
MS.gene46586.t1 AT5G07700 58.915 129 53 0 2 130 1 129 2.83e-51 167
MS.gene46586.t1 AT5G07700 58.915 129 53 0 2 130 1 129 2.83e-51 167
MS.gene46586.t1 AT1G74080 61.240 129 50 0 2 130 1 129 3.49e-51 166
MS.gene46586.t1 AT3G47600 52.597 154 71 1 2 153 1 154 4.42e-51 166
MS.gene46586.t1 AT3G62610 59.231 130 53 0 2 131 1 130 5.48e-51 166
MS.gene46586.t1 AT1G74430 56.204 137 60 0 2 138 1 137 8.62e-51 164
MS.gene46586.t1 AT3G13890 65.517 116 40 0 2 117 1 116 1.15e-50 166
MS.gene46586.t1 AT1G08810 64.655 116 41 0 2 117 1 116 2.92e-50 162
MS.gene46586.t1 AT5G62470 64.103 117 42 0 2 118 1 117 3.13e-50 164
MS.gene46586.t1 AT3G12720 62.205 127 47 1 1 127 11 136 4.39e-50 163
MS.gene46586.t1 AT1G18710 57.364 129 55 0 2 130 1 129 1.64e-49 160
MS.gene46586.t1 AT1G74650 62.185 119 45 0 2 120 1 119 4.84e-49 161
MS.gene46586.t1 AT3G28910 62.295 122 46 0 2 123 1 122 6.00e-49 160
MS.gene46586.t1 AT5G62470 64.103 117 41 1 2 118 1 116 7.59e-49 161
MS.gene46586.t1 AT1G63910 61.538 117 45 0 2 118 1 117 2.74e-48 160
MS.gene46586.t1 AT3G01530 61.207 116 45 0 13 128 25 140 4.67e-48 155
MS.gene46586.t1 AT3G13890 60.800 125 40 1 2 117 1 125 1.74e-47 158
MS.gene46586.t1 AT3G49690 59.829 117 46 1 2 117 1 117 1.38e-46 154
MS.gene46586.t1 AT1G79180 53.378 148 36 1 3 117 4 151 1.40e-46 154
MS.gene46586.t1 AT5G12870 66.981 106 35 0 13 118 18 123 1.46e-46 153
MS.gene46586.t1 AT2G36890 57.031 128 54 1 1 127 41 168 2.16e-46 154
MS.gene46586.t1 AT2G36890 57.480 127 53 1 2 127 1 127 2.18e-46 153
MS.gene46586.t1 AT5G65790 58.974 117 47 1 2 117 1 117 2.61e-46 155
MS.gene46586.t1 AT5G23000 61.017 118 43 2 2 117 1 117 2.53e-45 151
MS.gene46586.t1 AT4G37780 58.120 117 48 1 2 117 1 117 2.92e-45 150
MS.gene46586.t1 AT5G57620 58.974 117 47 1 2 117 1 117 5.58e-45 150
MS.gene46586.t1 AT3G08500 64.151 106 38 0 13 118 30 135 5.72e-45 150
MS.gene46586.t1 AT5G40350 60.952 105 41 0 13 117 17 121 5.90e-43 142
MS.gene46586.t1 AT3G27810 60.377 106 42 0 13 118 20 125 8.24e-43 142
MS.gene46586.t1 AT1G25340 53.390 118 55 0 14 131 19 136 1.14e-42 143
MS.gene46586.t1 AT1G68320 56.034 116 51 0 13 128 19 134 1.65e-42 143
MS.gene46586.t1 AT1G48000 55.372 121 53 1 11 131 30 149 9.35e-42 140
MS.gene46586.t1 AT3G06490 55.039 129 57 1 9 137 15 142 1.48e-41 141
MS.gene46586.t1 AT3G27920 58.654 104 43 0 14 117 15 118 3.24e-41 138
MS.gene46586.t1 AT5G55020 59.259 108 44 0 11 118 24 131 6.85e-41 144
MS.gene46586.t1 AT5G52260 59.483 116 44 1 1 116 3 115 8.07e-41 138
MS.gene46586.t1 AT5G06100 54.630 108 49 0 9 116 28 135 8.55e-41 143
MS.gene46586.t1 AT5G06100 54.630 108 49 0 9 116 28 135 8.55e-41 143
MS.gene46586.t1 AT5G06100 54.630 108 49 0 9 116 28 135 8.55e-41 143
MS.gene46586.t1 AT5G06100 54.630 108 49 0 9 116 28 135 8.55e-41 143
MS.gene46586.t1 AT5G14750 59.615 104 42 0 14 117 17 120 1.89e-40 135
MS.gene46586.t1 AT2G32460 53.488 129 58 2 12 140 17 143 2.22e-40 142
MS.gene46586.t1 AT2G32460 53.488 129 58 2 12 140 5 131 2.44e-40 141
MS.gene46586.t1 AT5G06100 54.630 108 49 0 9 116 28 135 3.41e-40 140
MS.gene46586.t1 AT3G11440 54.808 104 47 0 13 116 41 144 4.65e-40 142
MS.gene46586.t1 AT3G11440 54.808 104 47 0 13 116 41 144 4.65e-40 142
MS.gene46586.t1 AT3G11440 54.808 104 47 0 13 116 41 144 4.65e-40 142
MS.gene46586.t1 AT5G26660 58.824 119 44 2 46 163 14 128 5.08e-40 137
MS.gene46586.t1 AT3G24310 60.748 107 42 0 12 118 17 123 9.03e-40 135
MS.gene46586.t1 AT3G30210 51.969 127 61 0 12 138 26 152 1.74e-39 135
MS.gene46586.t1 AT4G13480 61.905 105 40 0 14 118 7 111 1.81e-39 134
MS.gene46586.t1 AT5G40330 57.692 104 44 0 14 117 13 116 3.10e-39 132
MS.gene46586.t1 AT3G11440 54.808 104 47 0 13 116 41 144 7.12e-39 137
MS.gene46586.t1 AT2G47190 54.955 111 50 0 13 123 20 130 9.63e-39 133
MS.gene46586.t1 AT2G26960 55.752 113 49 1 10 122 17 128 1.22e-38 136
MS.gene46586.t1 AT4G26930 47.183 142 67 2 11 151 17 151 1.50e-38 135
MS.gene46586.t1 AT1G25340 50.847 118 53 1 14 131 19 131 3.14e-38 132
MS.gene46586.t1 AT1G25340 50.847 118 53 1 14 131 19 131 4.67e-38 132
MS.gene46586.t1 AT4G25560 59.223 103 42 0 14 116 11 113 5.37e-38 131
MS.gene46586.t1 AT5G49620 50.388 129 63 1 9 137 22 149 1.01e-37 131
MS.gene46586.t1 AT5G35550 59.048 105 43 0 13 117 14 118 1.98e-37 129
MS.gene46586.t1 AT5G59780 57.547 106 45 0 13 118 8 113 1.99e-37 128
MS.gene46586.t1 AT3G46130 57.009 107 46 0 12 118 8 114 2.88e-37 129
MS.gene46586.t1 AT3G48920 54.902 102 46 0 14 115 19 120 7.46e-36 125
MS.gene46586.t1 AT3G53200 57.692 104 44 0 13 116 9 112 2.51e-34 120
MS.gene46586.t1 AT5G52600 46.923 130 60 1 10 130 9 138 2.97e-34 119
MS.gene46586.t1 AT5G49620 45.455 143 63 2 9 137 22 163 6.18e-34 122
MS.gene46586.t1 AT3G12820 77.143 70 16 0 48 117 1 70 3.15e-33 116
MS.gene46586.t1 AT5G14750 61.905 84 27 1 39 117 3 86 3.09e-32 113
MS.gene46586.t1 AT1G66370 51.304 115 52 1 2 116 1 111 8.89e-32 114
MS.gene46586.t1 AT3G47600 43.571 140 73 2 16 153 13 148 1.15e-31 116
MS.gene46586.t1 AT2G26950 46.875 128 64 3 10 137 13 136 1.74e-31 116
MS.gene46586.t1 AT1G66380 55.238 105 47 0 12 116 7 111 2.66e-31 110
MS.gene46586.t1 AT5G40350 68.056 72 23 0 46 117 5 76 2.67e-30 108
MS.gene46586.t1 AT3G27810 67.123 73 24 0 46 118 4 76 2.87e-30 108
MS.gene46586.t1 AT1G56650 54.286 105 48 0 12 116 7 111 1.15e-29 108
MS.gene46586.t1 AT5G35550 55.789 95 39 1 26 117 27 121 1.47e-29 108
MS.gene46586.t1 AT3G60460 44.954 109 59 1 13 120 11 119 4.66e-29 108
MS.gene46586.t1 AT1G66390 54.286 105 48 0 12 116 7 111 1.09e-28 106
MS.gene46586.t1 AT1G18960 44.444 117 62 2 14 130 9 122 1.23e-27 105
MS.gene46586.t1 AT3G46130 63.514 74 27 0 45 118 9 82 1.58e-27 102
MS.gene46586.t1 AT2G23290 49.515 103 49 2 15 116 13 113 2.04e-27 104
MS.gene46586.t1 AT5G58850 47.619 105 52 2 13 116 103 205 3.07e-27 105
MS.gene46586.t1 AT5G59780 64.384 73 26 0 46 118 20 92 3.46e-27 101
MS.gene46586.t1 AT1G22640 62.667 75 28 0 59 133 1 75 3.62e-27 101
MS.gene46586.t1 AT3G46130 64.384 73 26 0 46 118 20 92 4.16e-27 102
MS.gene46586.t1 AT1G69560 39.041 146 79 3 10 154 102 238 6.97e-27 103
MS.gene46586.t1 AT1G69560 38.776 147 80 3 9 154 117 254 8.62e-27 103
MS.gene46586.t1 AT5G02320 46.789 109 55 2 13 120 65 171 2.54e-26 103
MS.gene46586.t1 AT5G02320 47.222 108 54 2 13 119 125 230 3.60e-26 103
MS.gene46586.t1 AT5G02320 47.222 108 54 2 13 119 125 230 3.60e-26 103
MS.gene46586.t1 AT3G53200 66.197 71 24 0 46 116 9 79 4.04e-26 99.0
MS.gene46586.t1 AT3G09230 47.115 104 52 2 15 117 55 156 4.90e-26 102
MS.gene46586.t1 AT3G09370 46.296 108 55 2 13 119 141 246 8.01e-26 102
MS.gene46586.t1 AT4G37260 44.444 108 57 2 15 121 13 118 9.11e-26 100
MS.gene46586.t1 AT3G09370 46.296 108 55 2 13 119 133 238 1.22e-25 102
MS.gene46586.t1 AT3G09370 46.296 108 55 2 13 119 128 233 1.40e-25 102
MS.gene46586.t1 AT1G71030 55.844 77 34 0 52 128 5 81 1.65e-25 96.7
MS.gene46586.t1 AT1G71030 55.844 77 34 0 52 128 19 95 1.87e-25 96.7
MS.gene46586.t1 AT5G11050 36.691 139 76 3 15 152 105 232 2.48e-25 100
MS.gene46586.t1 AT1G17950 48.077 104 51 2 14 116 4 105 6.09e-25 96.7
MS.gene46586.t1 AT1G26780 46.729 107 54 2 13 118 96 200 1.20e-24 96.7
MS.gene46586.t1 AT3G27785 46.296 108 55 2 10 116 184 289 1.30e-24 98.6
MS.gene46586.t1 AT2G39880 47.573 103 51 2 15 116 50 150 1.49e-24 97.8
MS.gene46586.t1 AT1G26780 46.729 107 54 2 13 118 96 200 2.63e-24 97.1
MS.gene46586.t1 AT5G67300 43.689 103 55 2 15 116 6 106 2.97e-24 96.3
MS.gene46586.t1 AT3G55730 45.794 107 55 2 15 120 56 160 4.06e-24 97.1
MS.gene46586.t1 AT4G18770 42.202 109 60 2 10 117 212 318 5.20e-24 97.1
MS.gene46586.t1 AT5G11510 44.340 106 56 2 13 117 79 182 1.34e-23 96.7
MS.gene46586.t1 AT5G11510 44.340 106 56 2 13 117 79 182 1.34e-23 96.7
MS.gene46586.t1 AT5G11510 44.340 106 56 2 13 117 79 182 1.34e-23 96.7
MS.gene46586.t1 AT5G11510 44.340 106 56 2 13 117 79 182 1.40e-23 96.7
MS.gene46586.t1 AT3G50060 42.718 103 56 2 15 116 6 106 3.27e-23 93.2
MS.gene46586.t1 AT1G66380 58.904 73 30 0 44 116 6 78 6.35e-23 87.8
MS.gene46586.t1 AT4G32730 41.509 106 59 2 13 117 85 188 9.20e-23 94.4
MS.gene46586.t1 AT4G32730 41.509 106 59 2 13 117 85 188 9.20e-23 94.4
MS.gene46586.t1 AT4G32730 41.509 106 59 2 13 117 85 188 9.20e-23 94.4
MS.gene46586.t1 AT4G32730 41.509 106 59 2 13 117 85 188 9.20e-23 94.4
MS.gene46586.t1 AT4G32730 41.509 106 59 2 13 117 85 188 9.34e-23 94.4
MS.gene46586.t1 AT1G73410 47.170 106 53 2 14 118 5 108 1.70e-22 90.1
MS.gene46586.t1 AT1G73410 47.170 106 53 2 14 118 5 108 2.13e-22 89.0
MS.gene46586.t1 AT5G11510 44.340 106 56 2 13 117 79 182 2.52e-22 92.8
MS.gene46586.t1 AT3G23250 66.667 60 20 0 59 118 1 60 3.31e-22 89.4
MS.gene46586.t1 AT5G14750 66.102 59 20 0 59 117 1 59 4.61e-22 86.7
MS.gene46586.t1 AT5G14750 66.102 59 20 0 59 117 1 59 4.61e-22 86.7
MS.gene46586.t1 AT3G29020 33.813 139 87 3 14 151 64 198 5.34e-22 88.6
MS.gene46586.t1 AT3G29020 33.566 143 80 3 14 143 66 206 1.24e-21 89.0
MS.gene46586.t1 AT5G17800 40.952 105 61 1 14 118 92 195 1.54e-21 89.0
MS.gene46586.t1 AT4G33450 40.351 114 60 3 4 116 13 119 4.53e-21 86.7
MS.gene46586.t1 AT5G40360 40.404 99 58 1 13 111 156 253 8.92e-21 87.4
MS.gene46586.t1 AT5G14340 58.904 73 27 1 89 161 10 79 1.12e-20 84.3
MS.gene46586.t1 AT2G25230 40.777 103 58 2 10 111 21 121 1.14e-19 82.8
MS.gene46586.t1 AT1G66380 44.898 98 54 0 12 109 7 104 1.92e-19 79.0
MS.gene46586.t1 AT5G39700 36.893 103 64 1 16 118 57 158 8.37e-18 76.6
MS.gene46586.t1 AT4G00540 41.441 111 59 3 12 118 100 208 8.63e-18 79.7
MS.gene46586.t1 AT4G00540 41.441 111 59 3 12 118 98 206 1.17e-17 79.3
MS.gene46586.t1 AT5G61420 55.385 65 28 1 82 145 2 66 1.97e-16 74.7
MS.gene46586.t1 AT2G37630 38.000 100 60 1 14 111 3 102 2.57e-15 72.4
MS.gene46586.t1 AT5G40430 34.314 102 65 1 10 111 49 148 5.39e-15 70.5
MS.gene46586.t1 AT2G02820 34.862 109 70 1 18 126 33 140 1.89e-14 69.7
MS.gene46586.t1 AT2G02820 35.238 105 67 1 18 122 33 136 2.45e-14 69.7
MS.gene46586.t1 AT2G02820 35.238 105 67 1 18 122 33 136 2.79e-14 69.7
MS.gene46586.t1 AT4G28110 68.293 41 13 0 89 129 4 44 6.72e-14 66.6
MS.gene46586.t1 AT1G14350 36.634 101 63 1 18 118 28 127 7.33e-14 68.6
MS.gene46586.t1 AT1G14350 36.634 101 63 1 18 118 28 127 7.33e-14 68.6
MS.gene46586.t1 AT5G15310 68.293 41 13 0 89 129 9 49 1.26e-13 66.6
MS.gene46586.t1 AT5G59780 58.333 48 20 0 71 118 1 48 8.19e-13 63.2
MS.gene46586.t1 AT3G46130 58.333 48 20 0 71 118 1 48 1.50e-12 62.8
MS.gene46586.t1 AT1G74430 44.828 58 32 0 81 138 11 68 6.65e-12 61.2
MS.gene46586.t1 AT3G18100 32.292 96 64 1 14 109 332 426 7.41e-12 62.8
MS.gene46586.t1 AT1G74650 64.286 42 15 0 79 120 2 43 7.86e-12 62.0
MS.gene46586.t1 AT3G18100 32.292 96 64 1 14 109 384 478 8.43e-12 62.8
MS.gene46586.t1 AT3G18100 32.292 96 64 1 14 109 497 591 9.23e-12 62.8
MS.gene46586.t1 AT3G18100 32.292 96 64 1 14 109 545 639 1.03e-11 62.4
MS.gene46586.t1 AT4G25560 59.524 42 17 0 75 116 6 47 1.06e-11 60.8
MS.gene46586.t1 AT1G22640 60.000 45 18 0 89 133 16 60 1.63e-11 60.1
MS.gene46586.t1 AT3G28910 58.696 46 19 0 79 124 2 47 1.75e-11 60.8

Find 36 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAACCCTCTTGGAATATT+TGG 0.126877 7.4:+62240712 None:intergenic
CTCTTGGAATATTTGGTTCT+TGG 0.210662 7.4:+62240719 None:intergenic
AACAATGAATCCCATTATTA+AGG 0.275432 7.4:+62241720 None:intergenic
TCAATTGGCTTGTGGTTCAC+TGG 0.298740 7.4:+62240784 None:intergenic
ATTTCATTGTCTGTTCTTCC+AGG 0.318010 7.4:+62240862 None:intergenic
AAATATTTACCTGCAAGTTT+AGG 0.344140 7.4:+62241686 None:intergenic
CAGTAAAACCACCTCTCTTA+AGG 0.350372 7.4:+62241517 None:intergenic
TACATGCCCGTCTTGGTAAC+AGG 0.388478 7.4:-62241467 MS.gene46586:intron
TTAATAATGGGATTCATTGT+TGG 0.399119 7.4:-62241718 MS.gene46586:CDS
AGAATGGTTCCTAAACTTGC+AGG 0.410051 7.4:-62241695 MS.gene46586:intron
AAATGTGGAGATTAAATCCT+TGG 0.423182 7.4:-62240686 MS.gene46586:CDS
ACAATGAAATTAAGAATCAT+TGG 0.430588 7.4:-62240849 MS.gene46586:CDS
TGGGATTCATTGTTGGAGAA+TGG 0.443481 7.4:-62241711 MS.gene46586:CDS
AAGAAGAAGCTGAAGTTCCT+TGG 0.445609 7.4:-62240814 MS.gene46586:CDS
CAATTGGCTTGTGGTTCACT+GGG 0.446040 7.4:+62240785 None:intergenic
TGAGATGGATTAATTATTTG+AGG 0.448610 7.4:-62241545 MS.gene46586:CDS
TTAAGAGGTTCAAAGAAAAT+GGG 0.482047 7.4:-62241824 None:intergenic
AAACCACCTCTCTTAAGGTC+TGG 0.517152 7.4:+62241522 None:intergenic
TTTGAAGGTCTTCTAAGATG+TGG 0.533534 7.4:-62241582 MS.gene46586:intron
TGATCTTCCTCAATAGTCCA+TGG 0.541020 7.4:+62241761 None:intergenic
AAGAGGGTTTAAAGAAAATG+TGG 0.542279 7.4:-62240701 MS.gene46586:CDS
ATACAACTACATGCCCGTCT+TGG 0.546437 7.4:-62241474 MS.gene46586:CDS
GTTGTACCTGTTACCAAGAC+GGG 0.553249 7.4:+62241461 None:intergenic
CAACCATGTTGTGATAAGGT+TGG 0.554200 7.4:-62241797 MS.gene46586:CDS
GAAAGAGTTGTAGATTGAGA+TGG 0.557753 7.4:-62241560 MS.gene46586:CDS
GATAAGGTTGGTTTGAAGAG+AGG 0.562058 7.4:-62241785 MS.gene46586:CDS
GAGAGGACCATGGACTATTG+AGG 0.574885 7.4:-62241768 MS.gene46586:CDS
AGGCCAGACCTTAAGAGAGG+TGG 0.579334 7.4:-62241525 MS.gene46586:CDS
AAGACAACCATGTTGTGATA+AGG 0.590627 7.4:-62241801 MS.gene46586:CDS
TTGAGGCCAGACCTTAAGAG+AGG 0.617024 7.4:-62241528 MS.gene46586:CDS
AAGAACCAAATATTCCAAGA+GGG 0.640702 7.4:-62240717 MS.gene46586:CDS
AAACCAACCTTATCACAACA+TGG 0.641918 7.4:+62241794 None:intergenic
TGTTGTACCTGTTACCAAGA+CGG 0.646872 7.4:+62241460 None:intergenic
CAAGAACCAAATATTCCAAG+AGG 0.654416 7.4:-62240718 MS.gene46586:CDS
TTGGTTTGAAGAGAGGACCA+TGG 0.663165 7.4:-62241778 MS.gene46586:CDS
GGTTCACTGGGTCTAAACCA+AGG 0.715541 7.4:+62240797 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTTATCATCATCAA+GGG + chr7.4:62241748-62241767 None:intergenic 15.0%
!!! TAATATTTTTATCATCATCA+AGG + chr7.4:62241749-62241768 None:intergenic 15.0%
!!! TGAATTTTATCCTTAATAAT+GGG - chr7.4:62240762-62240781 MS.gene46586:CDS 15.0%
!! ACAATGAAATTAAGAATCAT+TGG - chr7.4:62241643-62241662 MS.gene46586:intron 20.0%
!! ATAGATAAGTTTCATTGAAA+AGG - chr7.4:62240865-62240884 MS.gene46586:CDS 20.0%
!! CTTTATATTGTAGTAAAATG+CGG - chr7.4:62241379-62241398 MS.gene46586:intron 20.0%
!! GTGAAATTTGAATCTAATAT+TGG - chr7.4:62241517-62241536 MS.gene46586:CDS 20.0%
!!! ATAATGAAGCACATTTTTTT+AGG - chr7.4:62241583-62241602 MS.gene46586:intron 20.0%
!!! GTGAATTTTATCCTTAATAA+TGG - chr7.4:62240761-62240780 MS.gene46586:CDS 20.0%
!!! TGGTTTTAAAACAATATCAA+TGG - chr7.4:62241537-62241556 MS.gene46586:CDS 20.0%
!!! TTACAATTGTTGTTATACTA+CGG - chr7.4:62241176-62241195 MS.gene46586:intron 20.0%
! AAAGTCAAATCGTTATATTG+TGG - chr7.4:62241254-62241273 MS.gene46586:intron 25.0%
! AAATATTTACCTGCAAGTTT+AGG + chr7.4:62240809-62240828 None:intergenic 25.0%
! AACAATGAATCCCATTATTA+AGG + chr7.4:62240775-62240794 None:intergenic 25.0%
! TGTTATACTACGGTAAATTA+TGG - chr7.4:62241186-62241205 MS.gene46586:intron 25.0%
! TTCTAATGTTTGCATATATG+AGG - chr7.4:62241079-62241098 MS.gene46586:intron 25.0%
!! CGCATTTTACTACAATATAA+AGG + chr7.4:62241381-62241400 None:intergenic 25.0%
!! TTAATAATGGGATTCATTGT+TGG - chr7.4:62240774-62240793 MS.gene46586:CDS 25.0%
!!! TGAGATGGATTAATTATTTG+AGG - chr7.4:62240947-62240966 MS.gene46586:intron 25.0%
AAATGTGGAGATTAAATCCT+TGG - chr7.4:62241806-62241825 MS.gene46586:CDS 30.0%
AAGAACCAAATATTCCAAGA+GGG - chr7.4:62241775-62241794 MS.gene46586:CDS 30.0%
AAGAGGGTTTAAAGAAAATG+TGG - chr7.4:62241791-62241810 MS.gene46586:CDS 30.0%
AAGTAAAGTGTGATAGTTTG+CGG - chr7.4:62241343-62241362 MS.gene46586:intron 30.0%
AGACTATTGCGAATAACTTA+GGG + chr7.4:62241106-62241125 None:intergenic 30.0%
TTAAACCCTCTTGGAATATT+TGG + chr7.4:62241783-62241802 None:intergenic 30.0%
! AAACCATAGTCTTAAAAGTG+CGG + chr7.4:62241299-62241318 None:intergenic 30.0%
! ACATTTTCTTTAAACCCTCT+TGG + chr7.4:62241792-62241811 None:intergenic 30.0%
! TATAACGATTTGACTTTGAG+AGG + chr7.4:62241251-62241270 None:intergenic 30.0%
!! AACATGGTGCATATTTTTGA+AGG - chr7.4:62240895-62240914 MS.gene46586:intron 30.0%
!! TTGAAAAGGTGTTTCTAACA+TGG - chr7.4:62240879-62240898 MS.gene46586:CDS 30.0%
!!! ATGAAGCACATTTTTTTAGG+TGG - chr7.4:62241586-62241605 MS.gene46586:intron 30.0%
AAACCAACCTTATCACAACA+TGG + chr7.4:62240701-62240720 None:intergenic 35.0%
AAGACAACCATGTTGTGATA+AGG - chr7.4:62240691-62240710 MS.gene46586:CDS 35.0%
ATTTCATTGTCTGTTCTTCC+AGG + chr7.4:62241633-62241652 None:intergenic 35.0%
CAAGAACCAAATATTCCAAG+AGG - chr7.4:62241774-62241793 MS.gene46586:CDS 35.0%
CCTCTCAAATTGCAATGTTA+CGG - chr7.4:62241436-62241455 MS.gene46586:intron 35.0%
GAAAGAGTTGTAGATTGAGA+TGG - chr7.4:62240932-62240951 MS.gene46586:intron 35.0%
GACTATTGCGAATAACTTAG+GGG + chr7.4:62241105-62241124 None:intergenic 35.0%
GAGACTATTGCGAATAACTT+AGG + chr7.4:62241107-62241126 None:intergenic 35.0%
! AAGATTGCTTCACATTTTCC+TGG - chr7.4:62241612-62241631 MS.gene46586:intron 35.0%
!! CTCTTGGAATATTTGGTTCT+TGG + chr7.4:62241776-62241795 None:intergenic 35.0%
!! TGGTTTTACTGAAATGGAAG+AGG - chr7.4:62240987-62241006 MS.gene46586:intron 35.0%
!! TTTGAAGGTCTTCTAAGATG+TGG - chr7.4:62240910-62240929 MS.gene46586:intron 35.0%
!!! GTTTGTTGCTTTTGCTCAAT+TGG + chr7.4:62241726-62241745 None:intergenic 35.0%
AAGAAGAAGCTGAAGTTCCT+TGG - chr7.4:62241678-62241697 MS.gene46586:intron 40.0%
AGAATGGTTCCTAAACTTGC+AGG - chr7.4:62240797-62240816 MS.gene46586:CDS 40.0%
CAACCATGTTGTGATAAGGT+TGG - chr7.4:62240695-62240714 MS.gene46586:CDS 40.0%
CAGTAAAACCACCTCTCTTA+AGG + chr7.4:62240978-62240997 None:intergenic 40.0%
CCGTAACATTGCAATTTGAG+AGG + chr7.4:62241439-62241458 None:intergenic 40.0%
TGATCTTCCTCAATAGTCCA+TGG + chr7.4:62240734-62240753 None:intergenic 40.0%
TGGGATTCATTGTTGGAGAA+TGG - chr7.4:62240781-62240800 MS.gene46586:CDS 40.0%
TGTTGTACCTGTTACCAAGA+CGG + chr7.4:62241035-62241054 None:intergenic 40.0%
! AGTGTGATAGTTTGCGGTTA+TGG - chr7.4:62241349-62241368 MS.gene46586:intron 40.0%
!! GAGAGGTGGTTTTACTGAAA+TGG - chr7.4:62240981-62241000 MS.gene46586:intron 40.0%
!! GATAAGGTTGGTTTGAAGAG+AGG - chr7.4:62240707-62240726 MS.gene46586:CDS 40.0%
!!! TGTCCGCACTTTTAAGACTA+TGG - chr7.4:62241293-62241312 MS.gene46586:intron 40.0%
AAACCACCTCTCTTAAGGTC+TGG + chr7.4:62240973-62240992 None:intergenic 45.0%
ATACAACTACATGCCCGTCT+TGG - chr7.4:62241018-62241037 MS.gene46586:intron 45.0%
CGTTATATTGTGGTCGCACT+TGG - chr7.4:62241264-62241283 MS.gene46586:intron 45.0%
GTTGTACCTGTTACCAAGAC+GGG + chr7.4:62241034-62241053 None:intergenic 45.0%
! TTGGTTTGAAGAGAGGACCA+TGG - chr7.4:62240714-62240733 MS.gene46586:CDS 45.0%
!! CAATTGGCTTGTGGTTCACT+GGG + chr7.4:62241710-62241729 None:intergenic 45.0%
!! TCAATTGGCTTGTGGTTCAC+TGG + chr7.4:62241711-62241730 None:intergenic 45.0%
!!! GCTTTTGCTCAATTGGCTTG+TGG + chr7.4:62241719-62241738 None:intergenic 45.0%
GGTGTCTGCAACTACAATCG+TGG + chr7.4:62241230-62241249 None:intergenic 50.0%
GGTTCACTGGGTCTAAACCA+AGG + chr7.4:62241698-62241717 None:intergenic 50.0%
TTGAGGCCAGACCTTAAGAG+AGG - chr7.4:62240964-62240983 MS.gene46586:intron 50.0%
! GAGAGGACCATGGACTATTG+AGG - chr7.4:62240724-62240743 MS.gene46586:CDS 50.0%
! TACATGCCCGTCTTGGTAAC+AGG - chr7.4:62241025-62241044 MS.gene46586:intron 50.0%
AGGCCAGACCTTAAGAGAGG+TGG - chr7.4:62240967-62240986 MS.gene46586:intron 55.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 62240683 62241831 62240683 ID=MS.gene46586
chr7.4 mRNA 62240683 62241831 62240683 ID=MS.gene46586.t1;Parent=MS.gene46586
chr7.4 exon 62241696 62241831 62241696 ID=MS.gene46586.t1.exon1;Parent=MS.gene46586.t1
chr7.4 CDS 62241696 62241831 62241696 ID=cds.MS.gene46586.t1;Parent=MS.gene46586.t1
chr7.4 exon 62241468 62241597 62241468 ID=MS.gene46586.t1.exon2;Parent=MS.gene46586.t1
chr7.4 CDS 62241468 62241597 62241468 ID=cds.MS.gene46586.t1;Parent=MS.gene46586.t1
chr7.4 exon 62240683 62240909 62240683 ID=MS.gene46586.t1.exon3;Parent=MS.gene46586.t1
chr7.4 CDS 62240683 62240909 62240683 ID=cds.MS.gene46586.t1;Parent=MS.gene46586.t1
Gene Sequence

>MS.gene46586

AAAATGGGAAGACAACCATGTTGTGATAAGGTTGGTTTGAAGAGAGGACCATGGACTATTGAGGAAGATCACAAGCTTGTGAATTTTATCCTTAATAATGGGATTCATTGTTGGAGAATGGTTCCTAAACTTGCAGGTAAATATTTTCATTAAATTTTTCTTTTTCACATGCTTTTTAGTTGATAGATAAGTTTCATTGAAAAGGTGTTTCTAACATGGTGCATATTTTTGAAGGTCTTCTAAGATGTGGAAAGAGTTGTAGATTGAGATGGATTAATTATTTGAGGCCAGACCTTAAGAGAGGTGGTTTTACTGAAATGGAAGAGGATCAAATTATACAACTACATGCCCGTCTTGGTAACAGGTACAACATGCTTTCTAAAATTTCATTATGCTTTCTAATGTTTGCATATATGAGGCCCCTAAGTTATTCGCAATAGTCTCTTAAAATTTTATACATAGTCTAAAAAAATGTTGAGTGCATCGTTTTAAATTACAATTGTTGTTATACTACGGTAAATTATGGATAAATGCAAAGATGAAACCACGATTGTAGTTGCAGACACCTCTCAAAGTCAAATCGTTATATTGTGGTCGCACTTGGAATTTTTGTCCGCACTTTTAAGACTATGGTTTAGTATTTTTGACATCGTGTATGCGAAGTAAAGTGTGATAGTTTGCGGTTATGGTGCAATCCTTTATATTGTAGTAAAATGCGGTCAGATGACGACAATTAGAATGTAGTTGCATAGACCTCTCAAATTGCAATGTTACGGTTACAAATCACAATTTAAAAGTATAGTCAAGTTTTAGAACTTGTGTATGCGAAATAGTGTGAAATTTGAATCTAATATTGGTTTTAAAACAATATCAATGGATGCATAATGTATGTTTTTTAACATAATGAAGCACATTTTTTTAGGTGGTCAAAGATTGCTTCACATTTTCCTGGAAGAACAGACAATGAAATTAAGAATCATTGGAACACAAAAATCAAGAAGAAGCTGAAGTTCCTTGGTTTAGACCCAGTGAACCACAAGCCAATTGAGCAAAAGCAACAAACCCTTGATGATGATAAAAATATTATTAACCAAGAACCAAATATTCCAAGAGGGTTTAAAGAAAATGTGGAGATTAAATCCTTGGAAA
Protein sequence

>MS.gene46586.t1

KMGRQPCCDKVGLKRGPWTIEEDHKLVNFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQIIQLHARLGNRWSKIASHFPGRTDNEIKNHWNTKIKKKLKFLGLDPVNHKPIEQKQQTLDDDKNIINQEPNIPRGFKENVEIKSLE