Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46797.t1 | XP_003599125.1 | 96.8 | 462 | 11 | 2 | 1 | 461 | 1 | 459 | 1.30E-219 | 772.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46797.t1 | E0X9N4 | 54.9 | 319 | 129 | 7 | 1 | 307 | 1 | 316 | 1.9e-73 | 278.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46797.t1 | G7IWL7 | 96.8 | 462 | 11 | 2 | 1 | 461 | 1 | 459 | 9.5e-220 | 772.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene46797.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46797.t1 | MTR_3g028170 | 98.140 | 484 | 5 | 2 | 1 | 483 | 1 | 481 | 0.0 | 983 |
| MS.gene46797.t1 | MTR_3g028190 | 52.888 | 329 | 126 | 8 | 1 | 307 | 1 | 322 | 1.39e-106 | 321 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46797.t1 | AT3G08505 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 1.43e-99 | 302 |
| MS.gene46797.t1 | AT3G08505 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 1.43e-99 | 302 |
| MS.gene46797.t1 | AT3G08505 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 1.43e-99 | 302 |
Find 106 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCAAGAGGCCATGGTTTC+TGG | 0.092914 | 3.3:+20702734 | MS.gene46797:CDS |
| CCTGCATCCTACTGATAAAA+AGG | 0.246259 | 3.3:+20698940 | MS.gene46797:CDS |
| GTTTCTGGGATAGATGATTT+TGG | 0.250360 | 3.3:+20702749 | MS.gene46797:CDS |
| CAGAAAGGGTCTTGTGCTTA+TGG | 0.259648 | 3.3:+20698596 | MS.gene46797:CDS |
| GATTCGCTGGCTGGCGGTTC+AGG | 0.263297 | 3.3:+20702551 | MS.gene46797:CDS |
| GTGCTAAAGTAGCATCAAAT+TGG | 0.277566 | 3.3:+20698708 | MS.gene46797:CDS |
| AGCATCATCTTCAGCATCTA+TGG | 0.292528 | 3.3:+20698655 | MS.gene46797:CDS |
| TTTGAGGACTTGTGACAAAA+AGG | 0.300862 | 3.3:+20698976 | MS.gene46797:CDS |
| GCTCTTGGGATGGATGCTTT+TGG | 0.301364 | 3.3:+20702656 | MS.gene46797:CDS |
| TTGTCATTCCAAGTGGTATT+TGG | 0.301592 | 3.3:+20699239 | MS.gene46797:CDS |
| AAGCCATCAGAATGTAAGTT+TGG | 0.301620 | 3.3:+20699076 | MS.gene46797:CDS |
| TGGCGGTTCAGGTCCTTGTT+TGG | 0.314287 | 3.3:+20702562 | MS.gene46797:CDS |
| GGCGGTTCAGGTCCTTGTTT+GGG | 0.319796 | 3.3:+20702563 | MS.gene46797:CDS |
| GGAAATGGAAATTGTCCATT+TGG | 0.321258 | 3.3:+20699447 | MS.gene46797:CDS |
| ACATGTCATGCATATCAAAA+TGG | 0.329065 | 3.3:-20702421 | None:intergenic |
| TATGATAGTTTGCGGCAAAC+AGG | 0.366308 | 3.3:-20699214 | None:intergenic |
| ATGTCAGAGGCCATGGCTCT+TGG | 0.366967 | 3.3:+20702641 | MS.gene46797:CDS |
| CAGAAAGCGTGATCACATTC+TGG | 0.369919 | 3.3:-20699106 | None:intergenic |
| GAAATGGAAATTGTCCATTT+GGG | 0.373127 | 3.3:+20699448 | MS.gene46797:CDS |
| GTTTGTCATGTATTCGCAAT+TGG | 0.373825 | 3.3:+20699128 | MS.gene46797:CDS |
| CGATTTCCATTGCAGAGGTT+GGG | 0.374375 | 3.3:-20699162 | None:intergenic |
| CCCTTTACACCACGCTTGTC+AGG | 0.379427 | 3.3:-20698758 | None:intergenic |
| AAACTTACATTCTGATGGCT+TGG | 0.395562 | 3.3:-20699074 | None:intergenic |
| CCTGACAAGCGTGGTGTAAA+GGG | 0.396694 | 3.3:+20698758 | MS.gene46797:CDS |
| TGTCAGAGGCCATGGCTCTT+GGG | 0.397086 | 3.3:+20702642 | MS.gene46797:CDS |
| TGCAAGAGGCCATGGTTTCT+GGG | 0.408782 | 3.3:+20702735 | MS.gene46797:CDS |
| AACTTACATTCTGATGGCTT+GGG | 0.410250 | 3.3:-20699073 | None:intergenic |
| AATGATGATGCATTCTCATA+TGG | 0.418914 | 3.3:+20702820 | MS.gene46797:CDS |
| TCAATTCCATGAAAATCATC+AGG | 0.425647 | 3.3:-20702773 | None:intergenic |
| ACCTGACAAGCGTGGTGTAA+AGG | 0.433230 | 3.3:+20698757 | MS.gene46797:CDS |
| GATAATGCCATCATCTCAAA+TGG | 0.443626 | 3.3:-20702527 | None:intergenic |
| AAAATCTCACCATGTCCAAC+AGG | 0.444234 | 3.3:+20697637 | None:intergenic |
| AGCCATCAGAATGTAAGTTT+GGG | 0.447348 | 3.3:+20699077 | MS.gene46797:CDS |
| CCGATTTCCATTGCAGAGGT+TGG | 0.450187 | 3.3:-20699163 | None:intergenic |
| CCAACCTCTGCAATGGAAAT+CGG | 0.452415 | 3.3:+20699163 | MS.gene46797:CDS |
| TTTGCTCTTATTATCAGAAA+GGG | 0.457240 | 3.3:+20698582 | MS.gene46797:CDS |
| GATTCCGACGATGAGGATGA+TGG | 0.459396 | 3.3:+20702593 | MS.gene46797:CDS |
| ATTTGCTCTTATTATCAGAA+AGG | 0.469932 | 3.3:+20698581 | MS.gene46797:CDS |
| GGGTTTACAACGCAAGCATC+AGG | 0.478209 | 3.3:+20698778 | MS.gene46797:CDS |
| GCATTATCAGATTCGCTGGC+TGG | 0.489570 | 3.3:+20702542 | MS.gene46797:CDS |
| TGCTAAAGTAGCATCAAATT+GGG | 0.490703 | 3.3:+20698709 | MS.gene46797:CDS |
| AATGGATCCATTTGAGATGA+TGG | 0.491467 | 3.3:+20702520 | MS.gene46797:CDS |
| GATTTCCATTGCAGAGGTTG+GGG | 0.493235 | 3.3:-20699161 | None:intergenic |
| TAGAAACAGCTAGCCCCAAA+TGG | 0.494880 | 3.3:-20699462 | None:intergenic |
| GGCTGCTATGCAAGAGGCCA+TGG | 0.495488 | 3.3:+20702727 | MS.gene46797:CDS |
| TGGTCTAGCACTACCAGTAC+TGG | 0.497170 | 3.3:-20698822 | None:intergenic |
| TGTCTCCATGTGTATGAGCC+AGG | 0.499940 | 3.3:-20702368 | None:intergenic |
| GGCTGCTATGTCAGAGGCCA+TGG | 0.506366 | 3.3:+20702634 | MS.gene46797:CDS |
| GAAGGAACCTTTGTAACCTT+CGG | 0.509713 | 3.3:-20698734 | None:intergenic |
| AGGGCAGGTTCTCACTGTAT+TGG | 0.515799 | 3.3:-20699194 | None:intergenic |
| TCCTCATCGTCGGAATCAAA+AGG | 0.516909 | 3.3:-20702587 | None:intergenic |
| GATGGCATTATCAGATTCGC+TGG | 0.519486 | 3.3:+20702538 | MS.gene46797:CDS |
| TAGTTTGCGGCAAACAGGGC+AGG | 0.521329 | 3.3:-20699209 | None:intergenic |
| TGACAAAATATGATAGTTTG+CGG | 0.523339 | 3.3:-20699222 | None:intergenic |
| TTCAGATTCTGCTGTGCCTG+TGG | 0.528627 | 3.3:+20698679 | MS.gene46797:CDS |
| AAAATCTGAGTCCCTCATGA+TGG | 0.533480 | 3.3:-20702489 | None:intergenic |
| TGGGGCTAGCTGTTTCTACA+AGG | 0.535393 | 3.3:+20699467 | MS.gene46797:CDS |
| CTGATGGCTTGGGTTTCGAA+AGG | 0.535450 | 3.3:-20699063 | None:intergenic |
| GCGCGAGGCGTATGTTTGAA+AGG | 0.542739 | 3.3:+20698248 | MS.gene46797:CDS |
| TTTGCTGCTGCCAACTGCCC+CGG | 0.543300 | 3.3:+20698866 | MS.gene46797:CDS |
| ATTCCGACGATGAGGATGAT+GGG | 0.544513 | 3.3:+20702594 | MS.gene46797:CDS |
| AGAGGCCATGGCTCTTGGGA+TGG | 0.546429 | 3.3:+20702646 | MS.gene46797:CDS |
| TGGGTTTCGTGTTTCTCGAA+TGG | 0.549304 | 3.3:+20702613 | MS.gene46797:CDS |
| AACCCAAACTTACATTCTGA+TGG | 0.549424 | 3.3:-20699079 | None:intergenic |
| TTTCAGCATACAGTGAAGCC+TGG | 0.555178 | 3.3:+20702350 | MS.gene46797:intron |
| ATGATAGTTTGCGGCAAACA+GGG | 0.556192 | 3.3:-20699213 | None:intergenic |
| GATATCAAAGCTGCATCCAT+AGG | 0.558891 | 3.3:-20702797 | None:intergenic |
| AGAACATCCACCGGGGCAGT+TGG | 0.563489 | 3.3:-20698876 | None:intergenic |
| TGGTATTTGGTTTACTACAA+AGG | 0.568402 | 3.3:+20699252 | MS.gene46797:CDS |
| AGCATCAAATTGGGTTCCGA+AGG | 0.575611 | 3.3:+20698718 | MS.gene46797:CDS |
| TGCGTTGAGGTGGTGGCCTG+CGG | 0.577755 | 3.3:-20702391 | None:intergenic |
| TAGTGCCCCAACCTCTGCAA+TGG | 0.580807 | 3.3:+20699156 | MS.gene46797:CDS |
| GGTGAGGTTGATTTATCAAG+TGG | 0.582135 | 3.3:+20702455 | MS.gene46797:CDS |
| TCGAATGGCTGCTATGCAAG+AGG | 0.583412 | 3.3:+20702721 | MS.gene46797:CDS |
| AAGATGATGCTTGAGAAGCT+CGG | 0.587317 | 3.3:-20698643 | None:intergenic |
| GGTCTTGTGCTTATGGTAGT+CGG | 0.588927 | 3.3:+20698603 | MS.gene46797:CDS |
| TTGGGTTCCGAAGGTTACAA+AGG | 0.589756 | 3.3:+20698727 | MS.gene46797:CDS |
| ACACCACGCTTGTCAGGTGA+AGG | 0.590498 | 3.3:-20698752 | None:intergenic |
| GGTGGATGTTCTCGTATTCA+CGG | 0.596225 | 3.3:+20698887 | MS.gene46797:CDS |
| AGCATCCATCCCAAGAGCCA+TGG | 0.600499 | 3.3:-20702651 | None:intergenic |
| ATCATCTATCCCAGAAACCA+TGG | 0.600753 | 3.3:-20702744 | None:intergenic |
| TGAATACGAGAACATCCACC+GGG | 0.602886 | 3.3:-20698884 | None:intergenic |
| TTATCAGATTCGCTGGCTGG+CGG | 0.606192 | 3.3:+20702545 | MS.gene46797:CDS |
| GCTGCTGCCAACTGCCCCGG+TGG | 0.606750 | 3.3:+20698869 | MS.gene46797:CDS |
| TGAAGCCTGGCTCATACACA+TGG | 0.611090 | 3.3:+20702363 | MS.gene46797:CDS |
| ACTTTAGCACTACGAGCCAC+AGG | 0.613607 | 3.3:-20698695 | None:intergenic |
| AAATGGAAATTGTCCATTTG+GGG | 0.614806 | 3.3:+20699449 | MS.gene46797:CDS |
| GATGTCGGTGAATCCAGTAC+TGG | 0.616230 | 3.3:+20698809 | MS.gene46797:CDS |
| ATAACTACAAGGCAAACTGC+AGG | 0.617185 | 3.3:+20699296 | MS.gene46797:CDS |
| CATGACATGTTGGATGTGCT+CGG | 0.619477 | 3.3:+20702434 | MS.gene46797:CDS |
| CATCAGGACTCTACCGATGT+CGG | 0.621122 | 3.3:+20698794 | MS.gene46797:CDS |
| GTAGTAAACCAAATACCACT+TGG | 0.621876 | 3.3:-20699247 | None:intergenic |
| GGAAATTATTGATAACTACA+AGG | 0.622897 | 3.3:+20699285 | MS.gene46797:CDS |
| GAATCAAAAGGACCCAAACA+AGG | 0.628395 | 3.3:-20702575 | None:intergenic |
| TCGAATGGCTGCTATGTCAG+AGG | 0.632427 | 3.3:+20702628 | MS.gene46797:CDS |
| GTGAATACGAGAACATCCAC+CGG | 0.635675 | 3.3:-20698885 | None:intergenic |
| AGTACTGGATTCACCGACAT+CGG | 0.635922 | 3.3:-20698807 | None:intergenic |
| AAACCCATCATCCTCATCGT+CGG | 0.647294 | 3.3:-20702597 | None:intergenic |
| ACTACCGATTTCCATTGCAG+AGG | 0.647818 | 3.3:-20699167 | None:intergenic |
| TGAGATTTACCTGTTGGACA+TGG | 0.648362 | 3.3:-20697646 | None:intergenic |
| CATACACATGGAGACACCGC+AGG | 0.651112 | 3.3:+20702375 | MS.gene46797:CDS |
| CAATTCCATGAAAATCATCA+GGG | 0.655793 | 3.3:-20702772 | None:intergenic |
| GTTCCTTCACCTGACAAGCG+TGG | 0.673427 | 3.3:+20698749 | MS.gene46797:CDS |
| CATGTTGGATGTGCTCGGTG+AGG | 0.698239 | 3.3:+20702439 | MS.gene46797:CDS |
| AGAAGATGATGAAGAGTACG+AGG | 0.701267 | 3.3:+20702850 | MS.gene46797:CDS |
| GAATACGAGAACATCCACCG+GGG | 0.861616 | 3.3:-20698883 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATAAAATTTTAATTAAA+AGG | + | chr3.3:20702125-20702144 | MS.gene46797:intron | 0.0% |
| !! | TAAATTTATGAATTATTTCA+GGG | + | chr3.3:20698211-20698230 | MS.gene46797:intron | 10.0% |
| !! | TTAAATTTATGAATTATTTC+AGG | + | chr3.3:20698210-20698229 | MS.gene46797:intron | 10.0% |
| !! | AAGAACATAAATAATCAAAT+GGG | - | chr3.3:20697785-20697804 | None:intergenic | 15.0% |
| !! | ATTTCAGATTAAAATAATAC+TGG | + | chr3.3:20701164-20701183 | MS.gene46797:intron | 15.0% |
| !! | TAAGAACATAAATAATCAAA+TGG | - | chr3.3:20697786-20697805 | None:intergenic | 15.0% |
| !! | TTACTAGTATAATACATAAT+TGG | + | chr3.3:20701110-20701129 | MS.gene46797:intron | 15.0% |
| !!! | GTATTATTTTAATCTGAAAT+TGG | - | chr3.3:20701164-20701183 | None:intergenic | 15.0% |
| !!! | TATAGAATTTTTTTTAGCAA+GGG | - | chr3.3:20702101-20702120 | None:intergenic | 15.0% |
| !!! | TCGATATTTTATAGTATTTT+AGG | - | chr3.3:20702199-20702218 | None:intergenic | 15.0% |
| !!! | TTATAGAATTTTTTTTAGCA+AGG | - | chr3.3:20702102-20702121 | None:intergenic | 15.0% |
| !!! | TTTAGGTTGATTTAATTTTA+GGG | + | chr3.3:20697965-20697984 | MS.gene46797:intron | 15.0% |
| !! | AAATATAAAAGAAAGAGAGA+TGG | - | chr3.3:20699495-20699514 | None:intergenic | 20.0% |
| !! | AATCTCATCTAAAAAACTAA+AGG | + | chr3.3:20700888-20700907 | MS.gene46797:intron | 20.0% |
| !! | AATCTGAAAGAGAAAAAAAT+AGG | - | chr3.3:20699402-20699421 | None:intergenic | 20.0% |
| !! | ATATAATACATATGTGTGTA+CGG | - | chr3.3:20700093-20700112 | None:intergenic | 20.0% |
| !! | ATCATGAATATAAATCAGAT+TGG | - | chr3.3:20700624-20700643 | None:intergenic | 20.0% |
| !! | ATTAAAATAATACTGGTAGT+GGG | + | chr3.3:20701171-20701190 | MS.gene46797:intron | 20.0% |
| !! | TAATATAAAATGGATATGCA+AGG | - | chr3.3:20702277-20702296 | None:intergenic | 20.0% |
| !! | TATGCTATTACAATACTAAA+CGG | - | chr3.3:20701232-20701251 | None:intergenic | 20.0% |
| !! | TATTATACTAGTAACCTATA+GGG | - | chr3.3:20701104-20701123 | None:intergenic | 20.0% |
| !! | TATTTCTTATTCTTAGAAGT+AGG | + | chr3.3:20699762-20699781 | MS.gene46797:intron | 20.0% |
| !! | TCTCAAAGACTAATATAAAA+TGG | - | chr3.3:20702287-20702306 | None:intergenic | 20.0% |
| !! | TGTATTTATATTGTTCTTAC+TGG | + | chr3.3:20698538-20698557 | MS.gene46797:intron | 20.0% |
| !! | TTAAAAGGAGAAAACAAATT+AGG | + | chr3.3:20702140-20702159 | MS.gene46797:intron | 20.0% |
| !!! | AAATTGAAGAAACTATTTCT+AGG | - | chr3.3:20700393-20700412 | None:intergenic | 20.0% |
| !!! | AGAAATAGTTTCTTCAATTT+TGG | + | chr3.3:20700393-20700412 | MS.gene46797:intron | 20.0% |
| !!! | AGTAATTGAAGATTATTTCT+TGG | + | chr3.3:20698140-20698159 | MS.gene46797:intron | 20.0% |
| !!! | ATTTTCACAAATTATCACTT+TGG | + | chr3.3:20698433-20698452 | MS.gene46797:intron | 20.0% |
| !!! | CAAGTTCTTTTACAAATTTT+AGG | - | chr3.3:20699978-20699997 | None:intergenic | 20.0% |
| !!! | CTTTAATTTAGAATATGGAT+TGG | + | chr3.3:20699806-20699825 | MS.gene46797:intron | 20.0% |
| !!! | CTTTAGGTTGATTTAATTTT+AGG | + | chr3.3:20697964-20697983 | MS.gene46797:intron | 20.0% |
| !!! | TCTTTCTTTTATATTTTCCT+TGG | + | chr3.3:20699499-20699518 | MS.gene46797:intron | 20.0% |
| !!! | TGTAATAGCATACTTTATTT+TGG | + | chr3.3:20701240-20701259 | MS.gene46797:intron | 20.0% |
| !!! | TGTTTATTACATAGTGTTTT+TGG | + | chr3.3:20701793-20701812 | MS.gene46797:intron | 20.0% |
| !!! | TTACAAAACAAATTTTCATG+TGG | - | chr3.3:20698845-20698864 | None:intergenic | 20.0% |
| !!! | TTTACATTTTTTTCTTACAG+TGG | + | chr3.3:20700029-20700048 | MS.gene46797:intron | 20.0% |
| !!! | TTTTATATTAGTCTTTGAGA+TGG | + | chr3.3:20702287-20702306 | MS.gene46797:intron | 20.0% |
| ! | AATTATTAAGCGTGAATGTT+TGG | + | chr3.3:20699357-20699376 | MS.gene46797:intron | 25.0% |
| ! | AATTTATATGGCTATATGGA+TGG | - | chr3.3:20699637-20699656 | None:intergenic | 25.0% |
| ! | ACCATCAAAATTATCTTCAA+AGG | + | chr3.3:20700972-20700991 | MS.gene46797:intron | 25.0% |
| ! | ACTACTATTTAGTGGTTTAT+AGG | - | chr3.3:20700551-20700570 | None:intergenic | 25.0% |
| ! | AGGAAAAAGAAAATCATTTG+AGG | + | chr3.3:20698960-20698979 | MS.gene46797:CDS | 25.0% |
| ! | ATACAAAGTAGAAAACACAT+TGG | - | chr3.3:20698523-20698542 | None:intergenic | 25.0% |
| ! | ATACATAATTGGAATAATGC+TGG | + | chr3.3:20701121-20701140 | MS.gene46797:intron | 25.0% |
| ! | ATATTAGTAAGTTAGTGGTT+AGG | + | chr3.3:20701271-20701290 | MS.gene46797:intron | 25.0% |
| ! | ATTGGCATTTATTGAAAGAA+AGG | - | chr3.3:20699882-20699901 | None:intergenic | 25.0% |
| ! | ATTTGCTCTTATTATCAGAA+AGG | + | chr3.3:20698581-20698600 | MS.gene46797:CDS | 25.0% |
| ! | CAAATTTCAACATTCTGTAT+TGG | - | chr3.3:20699900-20699919 | None:intergenic | 25.0% |
| ! | CACTATGTAATAAACAGAAT+AGG | - | chr3.3:20701789-20701808 | None:intergenic | 25.0% |
| ! | GATCTATAGATCTAGTAAAA+TGG | - | chr3.3:20700288-20700307 | None:intergenic | 25.0% |
| ! | GATTAAAATAATACTGGTAG+TGG | + | chr3.3:20701170-20701189 | MS.gene46797:intron | 25.0% |
| ! | GCAAAATATTAGTAAGTTAG+TGG | + | chr3.3:20701266-20701285 | MS.gene46797:intron | 25.0% |
| ! | GGATAATTTATATGGCTATA+TGG | - | chr3.3:20699641-20699660 | None:intergenic | 25.0% |
| ! | GTAATAAACACTATCTTGTT+GGG | - | chr3.3:20701870-20701889 | None:intergenic | 25.0% |
| ! | GTATTATACTAGTAACCTAT+AGG | - | chr3.3:20701105-20701124 | None:intergenic | 25.0% |
| ! | TGACAAAATATGATAGTTTG+CGG | - | chr3.3:20699225-20699244 | None:intergenic | 25.0% |
| ! | TTTGCTCTTATTATCAGAAA+GGG | + | chr3.3:20698582-20698601 | MS.gene46797:CDS | 25.0% |
| !! | AGAATTTTATTCCATCATGA+GGG | + | chr3.3:20702478-20702497 | MS.gene46797:CDS | 25.0% |
| !! | ATTTTTGAACATAGACACTA+AGG | - | chr3.3:20702166-20702185 | None:intergenic | 25.0% |
| !! | GGAAATTATTGATAACTACA+AGG | + | chr3.3:20699285-20699304 | MS.gene46797:CDS | 25.0% |
| !! | TACAAAGTTATGATTTTGTC+AGG | - | chr3.3:20701983-20702002 | None:intergenic | 25.0% |
| !! | TCTTTTTCCTTTTTATCAGT+AGG | - | chr3.3:20698950-20698969 | None:intergenic | 25.0% |
| !!! | AGAGTTTAATGTTTTTCGAA+TGG | + | chr3.3:20702706-20702725 | MS.gene46797:CDS | 25.0% |
| !!! | ATAGTTTCTTCAATTTTGGT+TGG | + | chr3.3:20700397-20700416 | MS.gene46797:intron | 25.0% |
| !!! | ATCAGTTCTTTTTTCTCTTT+AGG | + | chr3.3:20697948-20697967 | MS.gene46797:intron | 25.0% |
| !!! | ATTTTTTTCTTACAGTGGAT+GGG | + | chr3.3:20700034-20700053 | MS.gene46797:intron | 25.0% |
| !!! | ATTTTTTTGTCTCATGTAGT+AGG | + | chr3.3:20700146-20700165 | MS.gene46797:intron | 25.0% |
| !!! | GATAATTTTGATGGTTTCTT+TGG | - | chr3.3:20700967-20700986 | None:intergenic | 25.0% |
| !!! | TCCTTTGAAGATAATTTTGA+TGG | - | chr3.3:20700976-20700995 | None:intergenic | 25.0% |
| !!! | TGTTGTTGTTTTTGCAATTT+AGG | + | chr3.3:20697735-20697754 | MS.gene46797:intron | 25.0% |
| !!! | TTCTTAATCTTGTTGTTTGA+TGG | + | chr3.3:20697800-20697819 | MS.gene46797:intron | 25.0% |
| AAATAGTAGTTGCTTAGTAG+AGG | + | chr3.3:20700561-20700580 | MS.gene46797:intron | 30.0% | |
| AAATGGAAATTGTCCATTTG+GGG | + | chr3.3:20699449-20699468 | MS.gene46797:CDS | 30.0% | |
| AAATTAAAGCCCCCATAAAA+GGG | - | chr3.3:20699795-20699814 | None:intergenic | 30.0% | |
| AACAACATCTACAAGGATTT+GGG | - | chr3.3:20699670-20699689 | None:intergenic | 30.0% | |
| AACAGAAAAAAGACCAAAGA+GGG | + | chr3.3:20701594-20701613 | MS.gene46797:intron | 30.0% | |
| AATAGTAGTTGCTTAGTAGA+GGG | + | chr3.3:20700562-20700581 | MS.gene46797:intron | 30.0% | |
| ACAATGTCCAAATCAATGAT+TGG | + | chr3.3:20700779-20700798 | MS.gene46797:intron | 30.0% | |
| ACATGTCATGCATATCAAAA+TGG | - | chr3.3:20702424-20702443 | None:intergenic | 30.0% | |
| ACTAAGCAACTACTATTTAG+TGG | - | chr3.3:20700559-20700578 | None:intergenic | 30.0% | |
| AGAACTAATCCAACAAAGAA+AGG | - | chr3.3:20699608-20699627 | None:intergenic | 30.0% | |
| ATAAGTCAACAACATCTACA+AGG | - | chr3.3:20699677-20699696 | None:intergenic | 30.0% | |
| ATGATAGAATGTTGTGTAAG+TGG | - | chr3.3:20700866-20700885 | None:intergenic | 30.0% | |
| ATTCAAAAGCTCAAACAGAT+TGG | - | chr3.3:20700369-20700388 | None:intergenic | 30.0% | |
| CAAATCAATGATTGGGATTA+AGG | + | chr3.3:20700787-20700806 | MS.gene46797:intron | 30.0% | |
| CAATGTCCAAATCAATGATT+GGG | + | chr3.3:20700780-20700799 | MS.gene46797:intron | 30.0% | |
| CAATTCCATGAAAATCATCA+GGG | - | chr3.3:20702775-20702794 | None:intergenic | 30.0% | |
| CAGTTAAACATAATACCTCA+TGG | + | chr3.3:20702060-20702079 | MS.gene46797:intron | 30.0% | |
| CATATGTCAGTAACAGTATA+TGG | - | chr3.3:20698339-20698358 | None:intergenic | 30.0% | |
| CGTAATAAACACTATCTTGT+TGG | - | chr3.3:20701871-20701890 | None:intergenic | 30.0% | |
| GAAATGGAAATTGTCCATTT+GGG | + | chr3.3:20699448-20699467 | MS.gene46797:CDS | 30.0% | |
| GATGCTGTGGAAATTAAATA+TGG | - | chr3.3:20700317-20700336 | None:intergenic | 30.0% | |
| TAAATTAAAGCCCCCATAAA+AGG | - | chr3.3:20699796-20699815 | None:intergenic | 30.0% | |
| TACTACAAAGGAAGAAAAAC+AGG | + | chr3.3:20699264-20699283 | MS.gene46797:CDS | 30.0% | |
| TAGTGGTTTATAGGAGAAAT+GGG | - | chr3.3:20700542-20700561 | None:intergenic | 30.0% | |
| TATAGTCACCCAAAATTTGT+AGG | + | chr3.3:20701073-20701092 | MS.gene46797:intron | 30.0% | |
| TATTCCAATGTGTTGTAACT+AGG | + | chr3.3:20700709-20700728 | MS.gene46797:intron | 30.0% | |
| TCAATTCCATGAAAATCATC+AGG | - | chr3.3:20702776-20702795 | None:intergenic | 30.0% | |
| TCGAAACAACTACTATCATA+TGG | + | chr3.3:20701524-20701543 | MS.gene46797:intron | 30.0% | |
| TCTGATGAGAAAAATCACAT+TGG | - | chr3.3:20698277-20698296 | None:intergenic | 30.0% | |
| TGCTAAAGTAGCATCAAATT+GGG | + | chr3.3:20698709-20698728 | MS.gene46797:CDS | 30.0% | |
| TTACAACACATTGGAATACA+TGG | - | chr3.3:20700707-20700726 | None:intergenic | 30.0% | |
| TTAGGTTATGGTAGTTTCTA+GGG | + | chr3.3:20701289-20701308 | MS.gene46797:intron | 30.0% | |
| TTAGTGGTTTATAGGAGAAA+TGG | - | chr3.3:20700543-20700562 | None:intergenic | 30.0% | |
| TTCAAAAGCTCAAACAGATT+GGG | - | chr3.3:20700368-20700387 | None:intergenic | 30.0% | |
| ! | AAAGTTATGATTTTGTCAGG+TGG | - | chr3.3:20701980-20701999 | None:intergenic | 30.0% |
| ! | AATGATGATGCATTCTCATA+TGG | + | chr3.3:20702820-20702839 | MS.gene46797:CDS | 30.0% |
| ! | AGTCAGCCATAAAATTTTGT+AGG | + | chr3.3:20701042-20701061 | MS.gene46797:intron | 30.0% |
| ! | ATATTTCTAACCCATCTTGT+TGG | - | chr3.3:20701839-20701858 | None:intergenic | 30.0% |
| ! | ATCTAACTGCATTTTGAATC+CGG | - | chr3.3:20701683-20701702 | None:intergenic | 30.0% |
| ! | CTTAATCCCAATCATTGATT+TGG | - | chr3.3:20700789-20700808 | None:intergenic | 30.0% |
| ! | GAGAATTTTATTCCATCATG+AGG | + | chr3.3:20702477-20702496 | MS.gene46797:CDS | 30.0% |
| ! | TAGGTTTCTTTCCCTTTTAT+GGG | + | chr3.3:20699781-20699800 | MS.gene46797:intron | 30.0% |
| ! | TCATATTTTGTCATTCCAAG+TGG | + | chr3.3:20699232-20699251 | MS.gene46797:CDS | 30.0% |
| ! | TGATTTTTCTCATCAGAGAA+AGG | + | chr3.3:20698280-20698299 | MS.gene46797:CDS | 30.0% |
| ! | TGCAATTTAGGTTTCAAAAG+AGG | + | chr3.3:20697747-20697766 | MS.gene46797:intron | 30.0% |
| ! | TGGTATTTGGTTTACTACAA+AGG | + | chr3.3:20699252-20699271 | MS.gene46797:CDS | 30.0% |
| ! | TTGATGGTTTCTTTGGATTT+GGG | - | chr3.3:20700960-20700979 | None:intergenic | 30.0% |
| ! | TTTGATGGTTTCTTTGGATT+TGG | - | chr3.3:20700961-20700980 | None:intergenic | 30.0% |
| ! | TTTTCATGGAATTGATCCTA+TGG | + | chr3.3:20702781-20702800 | MS.gene46797:CDS | 30.0% |
| ! | TTTTGATATGCATGACATGT+TGG | + | chr3.3:20702424-20702443 | MS.gene46797:CDS | 30.0% |
| !! | ACAAATTTTGGGTGACTATA+GGG | - | chr3.3:20701073-20701092 | None:intergenic | 30.0% |
| !! | AGGAGTTTTTAAGAAGTTCA+AGG | - | chr3.3:20701321-20701340 | None:intergenic | 30.0% |
| !! | ATTAACTTGCAACATACACT+AGG | - | chr3.3:20700432-20700451 | None:intergenic | 30.0% |
| !! | GCAATTTGTTAATCTGAATG+TGG | - | chr3.3:20701433-20701452 | None:intergenic | 30.0% |
| !! | TACAAATTTTGGGTGACTAT+AGG | - | chr3.3:20701074-20701093 | None:intergenic | 30.0% |
| !!! | AAACATTTTGACTCTGGAAA+TGG | + | chr3.3:20699432-20699451 | MS.gene46797:CDS | 30.0% |
| !!! | ACATAGTGTTTTTGGTGATA+GGG | + | chr3.3:20701801-20701820 | MS.gene46797:intron | 30.0% |
| !!! | CATTTTTTTCTTACAGTGGA+TGG | + | chr3.3:20700033-20700052 | MS.gene46797:intron | 30.0% |
| !!! | TACATAGTGTTTTTGGTGAT+AGG | + | chr3.3:20701800-20701819 | MS.gene46797:intron | 30.0% |
| AAACTTACATTCTGATGGCT+TGG | - | chr3.3:20699077-20699096 | None:intergenic | 35.0% | |
| AACCCAAACTTACATTCTGA+TGG | - | chr3.3:20699082-20699101 | None:intergenic | 35.0% | |
| AACTTACATTCTGATGGCTT+GGG | - | chr3.3:20699076-20699095 | None:intergenic | 35.0% | |
| AAGCCATCAGAATGTAAGTT+TGG | + | chr3.3:20699076-20699095 | MS.gene46797:CDS | 35.0% | |
| AATCAGTGCTAATTGTTGGT+TGG | + | chr3.3:20701619-20701638 | MS.gene46797:intron | 35.0% | |
| ACAACATCTACAAGGATTTG+GGG | - | chr3.3:20699669-20699688 | None:intergenic | 35.0% | |
| ACAGAAAAAAGACCAAAGAG+GGG | + | chr3.3:20701595-20701614 | MS.gene46797:intron | 35.0% | |
| AGATGAAATAAGAGATGCTG+TGG | - | chr3.3:20700330-20700349 | None:intergenic | 35.0% | |
| AGCCATCAGAATGTAAGTTT+GGG | + | chr3.3:20699077-20699096 | MS.gene46797:CDS | 35.0% | |
| AGGATTATGAACCAACAAGA+TGG | + | chr3.3:20701825-20701844 | MS.gene46797:intron | 35.0% | |
| ATACATGGAGCATAGAAAGT+AGG | - | chr3.3:20700692-20700711 | None:intergenic | 35.0% | |
| ATGATAATCAAGCTTGACCA+AGG | - | chr3.3:20699519-20699538 | None:intergenic | 35.0% | |
| ATGTAGTGATGACAATAGGA+AGG | - | chr3.3:20701568-20701587 | None:intergenic | 35.0% | |
| ATTCTTGCAAGCATACACAA+CGG | - | chr3.3:20699340-20699359 | None:intergenic | 35.0% | |
| CAAAGTAGAAAACACATTGG+CGG | - | chr3.3:20698520-20698539 | None:intergenic | 35.0% | |
| CAACAAAGAAAGGAAAAGCA+TGG | - | chr3.3:20699598-20699617 | None:intergenic | 35.0% | |
| CAACAACATCTACAAGGATT+TGG | - | chr3.3:20699671-20699690 | None:intergenic | 35.0% | |
| CATCATCATCATCATCATCA+GGG | - | chr3.3:20702682-20702701 | None:intergenic | 35.0% | |
| GAAAGTAGGGAATGTAATTG+AGG | - | chr3.3:20700678-20700697 | None:intergenic | 35.0% | |
| GAACAGAAAAAAGACCAAAG+AGG | + | chr3.3:20701593-20701612 | MS.gene46797:intron | 35.0% | |
| GAATGTTGTGTAAGTGGTAA+AGG | - | chr3.3:20700860-20700879 | None:intergenic | 35.0% | |
| GAGAAACGATCGAAGAAAAA+AGG | - | chr3.3:20697676-20697695 | None:intergenic | 35.0% | |
| GATAATGCCATCATCTCAAA+TGG | - | chr3.3:20702530-20702549 | None:intergenic | 35.0% | |
| GATGTATTCGTTTGACCAAA+TGG | - | chr3.3:20701402-20701421 | None:intergenic | 35.0% | |
| GATTATTTAATCCAGATGCG+TGG | - | chr3.3:20699709-20699728 | None:intergenic | 35.0% | |
| GGAAATGGAAATTGTCCATT+TGG | + | chr3.3:20699447-20699466 | MS.gene46797:CDS | 35.0% | |
| GGATTATGAACCAACAAGAT+GGG | + | chr3.3:20701826-20701845 | MS.gene46797:intron | 35.0% | |
| GGGAGAACGGATAATTTATA+TGG | - | chr3.3:20699649-20699668 | None:intergenic | 35.0% | |
| GTAAAATGGTGAATGTGACA+AGG | - | chr3.3:20700274-20700293 | None:intergenic | 35.0% | |
| GTAAGTTAGTGGTTAGGTTA+TGG | + | chr3.3:20701277-20701296 | MS.gene46797:intron | 35.0% | |
| GTAGTAAACCAAATACCACT+TGG | - | chr3.3:20699250-20699269 | None:intergenic | 35.0% | |
| GTGAATATCTTTCACCTCAT+AGG | + | chr3.3:20699922-20699941 | MS.gene46797:intron | 35.0% | |
| GTGCTAAAGTAGCATCAAAT+TGG | + | chr3.3:20698708-20698727 | MS.gene46797:CDS | 35.0% | |
| GTTAGGTTATGGTAGTTTCT+AGG | + | chr3.3:20701288-20701307 | MS.gene46797:intron | 35.0% | |
| GTTTGTCATGTATTCGCAAT+TGG | + | chr3.3:20699128-20699147 | MS.gene46797:CDS | 35.0% | |
| TACATGGAGCATAGAAAGTA+GGG | - | chr3.3:20700691-20700710 | None:intergenic | 35.0% | |
| TAGAGGGAAAATGAGTTCAA+AGG | + | chr3.3:20700578-20700597 | MS.gene46797:intron | 35.0% | |
| TCACCCAAAATTTGTAGGTA+TGG | + | chr3.3:20701078-20701097 | MS.gene46797:intron | 35.0% | |
| TCATCATCATCATCATCATC+AGG | - | chr3.3:20702683-20702702 | None:intergenic | 35.0% | |
| TGAAACTACTTGGAAGATCT+TGG | - | chr3.3:20700250-20700269 | None:intergenic | 35.0% | |
| TGTAGTGATGACAATAGGAA+GGG | - | chr3.3:20701567-20701586 | None:intergenic | 35.0% | |
| TGTCATGTAGTGATGACAAT+AGG | - | chr3.3:20701572-20701591 | None:intergenic | 35.0% | |
| TTCTCCTAGTTACAACACAT+TGG | - | chr3.3:20700716-20700735 | None:intergenic | 35.0% | |
| TTGTCATTCCAAGTGGTATT+TGG | + | chr3.3:20699239-20699258 | MS.gene46797:CDS | 35.0% | |
| TTTGAGGACTTGTGACAAAA+AGG | + | chr3.3:20698976-20698995 | MS.gene46797:CDS | 35.0% | |
| ! | AATGGATCCATTTGAGATGA+TGG | + | chr3.3:20702520-20702539 | MS.gene46797:CDS | 35.0% |
| ! | AGGTTTCTTTCCCTTTTATG+GGG | + | chr3.3:20699782-20699801 | MS.gene46797:intron | 35.0% |
| ! | CATGCTTTTCCTTTCTTTGT+TGG | + | chr3.3:20699596-20699615 | MS.gene46797:intron | 35.0% |
| ! | GCAGTTAGATCTGTGTTTTT+GGG | + | chr3.3:20701693-20701712 | MS.gene46797:intron | 35.0% |
| ! | GCCATAAAATTTTGTAGGCA+TGG | + | chr3.3:20701047-20701066 | MS.gene46797:intron | 35.0% |
| ! | GCCATGCCTACAAAATTTTA+TGG | - | chr3.3:20701051-20701070 | None:intergenic | 35.0% |
| ! | GGGGGCTTTAATTTAGAATA+TGG | + | chr3.3:20699801-20699820 | MS.gene46797:intron | 35.0% |
| ! | GTAGGTTTCTTTCCCTTTTA+TGG | + | chr3.3:20699780-20699799 | MS.gene46797:intron | 35.0% |
| ! | GTGAATGATTGTTGTTCAGT+TGG | - | chr3.3:20700071-20700090 | None:intergenic | 35.0% |
| ! | TAAGCTTTTACCCACCATAT+GGG | + | chr3.3:20700997-20701016 | MS.gene46797:intron | 35.0% |
| ! | TGATGATGATGATGATGATG+AGG | + | chr3.3:20702682-20702701 | MS.gene46797:CDS | 35.0% |
| ! | TGCAGTTAGATCTGTGTTTT+TGG | + | chr3.3:20701692-20701711 | MS.gene46797:intron | 35.0% |
| ! | TTAAGCTTTTACCCACCATA+TGG | + | chr3.3:20700996-20701015 | MS.gene46797:intron | 35.0% |
| !! | AATACCTCATGGACTAGATA+AGG | + | chr3.3:20702071-20702090 | MS.gene46797:intron | 35.0% |
| !! | CAAAAAGGAAAAGTACCTTC+TGG | + | chr3.3:20698991-20699010 | MS.gene46797:CDS | 35.0% |
| !! | GTCTACTAGACTTGTTAATG+AGG | + | chr3.3:20701019-20701038 | MS.gene46797:intron | 35.0% |
| !! | GTTTCAGGTGGACTAAATAA+TGG | - | chr3.3:20702034-20702053 | None:intergenic | 35.0% |
| !!! | AGGGACTCAGATTTTTTTGA+GGG | + | chr3.3:20702497-20702516 | MS.gene46797:CDS | 35.0% |
| !!! | CTCAGATTTTTTTGAGGGAA+TGG | + | chr3.3:20702502-20702521 | MS.gene46797:CDS | 35.0% |
| !!! | GACACTCTTGTTTTTCCATT+TGG | + | chr3.3:20701384-20701403 | MS.gene46797:intron | 35.0% |
| !!! | GATTGCAAACATTTTGACTC+TGG | + | chr3.3:20699426-20699445 | MS.gene46797:CDS | 35.0% |
| !!! | GTTTCTGGGATAGATGATTT+TGG | + | chr3.3:20702749-20702768 | MS.gene46797:CDS | 35.0% |
| AAAATCTGAGTCCCTCATGA+TGG | - | chr3.3:20702492-20702511 | None:intergenic | 40.0% | |
| AAGATGATGCTTGAGAAGCT+CGG | - | chr3.3:20698646-20698665 | None:intergenic | 40.0% | |
| AATAGGAAGGGTCTGGATAT+AGG | - | chr3.3:20701555-20701574 | None:intergenic | 40.0% | |
| ACAAGTCTAGTAGACCCATA+TGG | - | chr3.3:20701014-20701033 | None:intergenic | 40.0% | |
| ACCAACTGAGCTACTTACTT+GGG | + | chr3.3:20701358-20701377 | MS.gene46797:intron | 40.0% | |
| AGCATCATCTTCAGCATCTA+TGG | + | chr3.3:20698655-20698674 | MS.gene46797:CDS | 40.0% | |
| ATAACTACAAGGCAAACTGC+AGG | + | chr3.3:20699296-20699315 | MS.gene46797:CDS | 40.0% | |
| ATCATCTATCCCAGAAACCA+TGG | - | chr3.3:20702747-20702766 | None:intergenic | 40.0% | |
| ATTTAGTCCACCTGAAACAC+AGG | + | chr3.3:20702036-20702055 | MS.gene46797:intron | 40.0% | |
| ATTTGTAGGTATGGCCCTAT+AGG | + | chr3.3:20701087-20701106 | MS.gene46797:intron | 40.0% | |
| CAATGCGTCATAACTCAAAG+AGG | - | chr3.3:20700917-20700936 | None:intergenic | 40.0% | |
| CCTGAAACAGATCTGAGAAT+GGG | + | chr3.3:20701717-20701736 | MS.gene46797:intron | 40.0% | |
| CCTGCATCCTACTGATAAAA+AGG | + | chr3.3:20698940-20698959 | MS.gene46797:CDS | 40.0% | |
| CTCATAGGAAGATGATGTAG+AGG | + | chr3.3:20699937-20699956 | MS.gene46797:intron | 40.0% | |
| CTCTACATCATCTTCCTATG+AGG | - | chr3.3:20699939-20699958 | None:intergenic | 40.0% | |
| GAAGGAACCTTTGTAACCTT+CGG | - | chr3.3:20698737-20698756 | None:intergenic | 40.0% | |
| GAATCAAAAGGACCCAAACA+AGG | - | chr3.3:20702578-20702597 | None:intergenic | 40.0% | |
| GATATCAAAGCTGCATCCAT+AGG | - | chr3.3:20702800-20702819 | None:intergenic | 40.0% | |
| GGGAAATCAGTGCTAATTGT+TGG | + | chr3.3:20701615-20701634 | MS.gene46797:intron | 40.0% | |
| GTGACAAGGATGAAACTACT+TGG | - | chr3.3:20700260-20700279 | None:intergenic | 40.0% | |
| TATCACTTTGGTCGATGTGT+CGG | + | chr3.3:20698445-20698464 | MS.gene46797:intron | 40.0% | |
| TCCTGAAACAGATCTGAGAA+TGG | + | chr3.3:20701716-20701735 | MS.gene46797:intron | 40.0% | |
| TGAGTTATGACGCATTGCAT+TGG | + | chr3.3:20700920-20700939 | MS.gene46797:intron | 40.0% | |
| TGGTTTATAGGAGAAATGGG+TGG | - | chr3.3:20700539-20700558 | None:intergenic | 40.0% | |
| TTATAGGAGAAATGGGTGGA+GGG | - | chr3.3:20700535-20700554 | None:intergenic | 40.0% | |
| TTGGCTGGAAATGATACTAG+AGG | + | chr3.3:20701638-20701657 | MS.gene46797:intron | 40.0% | |
| TTTAGTCCACCTGAAACACA+GGG | + | chr3.3:20702037-20702056 | MS.gene46797:intron | 40.0% | |
| TTTATAGGAGAAATGGGTGG+AGG | - | chr3.3:20700536-20700555 | None:intergenic | 40.0% | |
| ! | ACACTTGTAGCTTTACACGT+TGG | - | chr3.3:20701462-20701481 | None:intergenic | 40.0% |
| ! | AGAAGATGATGAAGAGTACG+AGG | + | chr3.3:20702850-20702869 | MS.gene46797:CDS | 40.0% |
| ! | AGGGCCATACCTACAAATTT+TGG | - | chr3.3:20701085-20701104 | None:intergenic | 40.0% |
| ! | ATGATAGTTTGCGGCAAACA+GGG | - | chr3.3:20699216-20699235 | None:intergenic | 40.0% |
| ! | CCTTTTTATCAGTAGGATGC+AGG | - | chr3.3:20698943-20698962 | None:intergenic | 40.0% |
| ! | GGGCCATACCTACAAATTTT+GGG | - | chr3.3:20701084-20701103 | None:intergenic | 40.0% |
| ! | GGTGAGGTTGATTTATCAAG+TGG | + | chr3.3:20702455-20702474 | MS.gene46797:CDS | 40.0% |
| ! | GGTTTCTTTCCCTTTTATGG+GGG | + | chr3.3:20699783-20699802 | MS.gene46797:intron | 40.0% |
| ! | GTAGTAGGCAAGTGGTATTT+TGG | + | chr3.3:20700161-20700180 | MS.gene46797:intron | 40.0% |
| ! | GTTATGATTTTGTCAGGTGG+AGG | - | chr3.3:20701977-20701996 | None:intergenic | 40.0% |
| ! | TATGATAGTTTGCGGCAAAC+AGG | - | chr3.3:20699217-20699236 | None:intergenic | 40.0% |
| ! | TTTGGCCCTGATGATTTTCA+TGG | + | chr3.3:20702767-20702786 | MS.gene46797:CDS | 40.0% |
| !! | GCAAGTGGTATTTTGGACTT+TGG | + | chr3.3:20700168-20700187 | MS.gene46797:intron | 40.0% |
| !! | GGTTGATGAGATTTACCTGT+TGG | - | chr3.3:20697655-20697674 | None:intergenic | 40.0% |
| !!! | AAATGGTTTTGTCTGCGTTG+AGG | - | chr3.3:20702407-20702426 | None:intergenic | 40.0% |
| !!! | GAGGGACTCAGATTTTTTTG+AGG | + | chr3.3:20702496-20702515 | MS.gene46797:CDS | 40.0% |
| AAACCCATCATCCTCATCGT+CGG | - | chr3.3:20702600-20702619 | None:intergenic | 45.0% | |
| AGCATCAAATTGGGTTCCGA+AGG | + | chr3.3:20698718-20698737 | MS.gene46797:CDS | 45.0% | |
| AGGACAATGCTAGCAACTAG+CGG | - | chr3.3:20700840-20700859 | None:intergenic | 45.0% | |
| AGTCTAGTAGACCCATATGG+TGG | - | chr3.3:20701011-20701030 | None:intergenic | 45.0% | |
| ATTCCGACGATGAGGATGAT+GGG | + | chr3.3:20702594-20702613 | MS.gene46797:CDS | 45.0% | |
| CAACTAGCGGCTCTGTATTA+GGG | - | chr3.3:20700827-20700846 | None:intergenic | 45.0% | |
| CACAAACACAGACACCAGAA+AGG | - | chr3.3:20698486-20698505 | None:intergenic | 45.0% | |
| CACCAACTGAGCTACTTACT+TGG | + | chr3.3:20701357-20701376 | MS.gene46797:intron | 45.0% | |
| CATGACATGTTGGATGTGCT+CGG | + | chr3.3:20702434-20702453 | MS.gene46797:CDS | 45.0% | |
| CCAACCTCTGCAATGGAAAT+CGG | + | chr3.3:20699163-20699182 | MS.gene46797:CDS | 45.0% | |
| CCCATTCTCAGATCTGTTTC+AGG | - | chr3.3:20701720-20701739 | None:intergenic | 45.0% | |
| CGATTTCCATTGCAGAGGTT+GGG | - | chr3.3:20699165-20699184 | None:intergenic | 45.0% | |
| CTACAAGGATTTGGGGAGAA+CGG | - | chr3.3:20699662-20699681 | None:intergenic | 45.0% | |
| GATACTAGAGGCTAGTGCTA+TGG | + | chr3.3:20701650-20701669 | MS.gene46797:intron | 45.0% | |
| GATGGCATTATCAGATTCGC+TGG | + | chr3.3:20702538-20702557 | MS.gene46797:CDS | 45.0% | |
| GATTTCCATTGCAGAGGTTG+GGG | - | chr3.3:20699164-20699183 | None:intergenic | 45.0% | |
| GGACAAGTTGCTAAAGCTTG+TGG | - | chr3.3:20699861-20699880 | None:intergenic | 45.0% | |
| GGTGGATGTTCTCGTATTCA+CGG | + | chr3.3:20698887-20698906 | MS.gene46797:CDS | 45.0% | |
| GTCTAGTAGACCCATATGGT+GGG | - | chr3.3:20701010-20701029 | None:intergenic | 45.0% | |
| GTGAATACGAGAACATCCAC+CGG | - | chr3.3:20698888-20698907 | None:intergenic | 45.0% | |
| GTTTAACTGCCCTGTGTTTC+AGG | - | chr3.3:20702049-20702068 | None:intergenic | 45.0% | |
| TAGAAACAGCTAGCCCCAAA+TGG | - | chr3.3:20699465-20699484 | None:intergenic | 45.0% | |
| TATAGGAGAAATGGGTGGAG+GGG | - | chr3.3:20700534-20700553 | None:intergenic | 45.0% | |
| TCCCAAGTAAGTAGCTCAGT+TGG | - | chr3.3:20701362-20701381 | None:intergenic | 45.0% | |
| TCCTCATCGTCGGAATCAAA+AGG | - | chr3.3:20702590-20702609 | None:intergenic | 45.0% | |
| TGAATACGAGAACATCCACC+GGG | - | chr3.3:20698887-20698906 | None:intergenic | 45.0% | |
| TGATGACAATAGGAAGGGTC+TGG | - | chr3.3:20701562-20701581 | None:intergenic | 45.0% | |
| TGCAACATACACTAGGCAGT+AGG | - | chr3.3:20700425-20700444 | None:intergenic | 45.0% | |
| TGCTCCTTATCTAGTCCATG+AGG | - | chr3.3:20702078-20702097 | None:intergenic | 45.0% | |
| TGGGTTTCGTGTTTCTCGAA+TGG | + | chr3.3:20702613-20702632 | MS.gene46797:CDS | 45.0% | |
| TGTCTCATGTAGTAGGCAAG+TGG | + | chr3.3:20700153-20700172 | MS.gene46797:intron | 45.0% | |
| TTGGAAGATCTTGGAGACGA+TGG | - | chr3.3:20700241-20700260 | None:intergenic | 45.0% | |
| TTGGAATAATGCTGGACTGC+TGG | + | chr3.3:20701129-20701148 | MS.gene46797:intron | 45.0% | |
| TTGGGTTCCGAAGGTTACAA+AGG | + | chr3.3:20698727-20698746 | MS.gene46797:CDS | 45.0% | |
| TTTCAGCATACAGTGAAGCC+TGG | + | chr3.3:20702350-20702369 | MS.gene46797:intron | 45.0% | |
| ! | AGTACTGGATTCACCGACAT+CGG | - | chr3.3:20698810-20698829 | None:intergenic | 45.0% |
| ! | AGTGCTAATTGTTGGTTGGC+TGG | + | chr3.3:20701623-20701642 | MS.gene46797:intron | 45.0% |
| ! | ATGACGCATTGCATTGGTGA+TGG | + | chr3.3:20700926-20700945 | MS.gene46797:intron | 45.0% |
| ! | ATGATTTTGTCAGGTGGAGG+TGG | - | chr3.3:20701974-20701993 | None:intergenic | 45.0% |
| ! | CAGAAAGCGTGATCACATTC+TGG | - | chr3.3:20699109-20699128 | None:intergenic | 45.0% |
| ! | CAGAAAGGGTCTTGTGCTTA+TGG | + | chr3.3:20698596-20698615 | MS.gene46797:CDS | 45.0% |
| ! | GGTCTTGTGCTTATGGTAGT+CGG | + | chr3.3:20698603-20698622 | MS.gene46797:CDS | 45.0% |
| ! | GTGTCGGTGATTAGAGGTAT+TGG | - | chr3.3:20698374-20698393 | None:intergenic | 45.0% |
| ! | TAGTGGGTAAGAGTGGAAGT+AGG | + | chr3.3:20701187-20701206 | MS.gene46797:intron | 45.0% |
| !! | ACTACCGATTTCCATTGCAG+AGG | - | chr3.3:20699170-20699189 | None:intergenic | 45.0% |
| !! | ATACTGGTAGTGGGTAAGAG+TGG | + | chr3.3:20701180-20701199 | MS.gene46797:intron | 45.0% |
| !! | CAGGTGGACTAAATAATGGC+AGG | - | chr3.3:20702030-20702049 | None:intergenic | 45.0% |
| !! | GTTTGCAAGTTTTATGCGCG+AGG | + | chr3.3:20698233-20698252 | MS.gene46797:CDS | 45.0% |
| !! | TAGCACTGATTTCCCCTCTT+TGG | - | chr3.3:20701610-20701629 | None:intergenic | 45.0% |
| !! | TAGCTCAGTTGGTGAGCTAA+GGG | - | chr3.3:20701351-20701370 | None:intergenic | 45.0% |
| !! | TCCTTTTGATTCCGACGATG+AGG | + | chr3.3:20702586-20702605 | MS.gene46797:CDS | 45.0% |
| !!! | AGTGTTTTTGGTGATAGGGC+AGG | + | chr3.3:20701805-20701824 | MS.gene46797:intron | 45.0% |
| !!! | CGCTGTTTTTCAAAGCCAGA+AGG | - | chr3.3:20699009-20699028 | None:intergenic | 45.0% |
| !!! | ATTTTTGAAATTTAATTTTT+AGG | + | chr3.3:20698013-20698032 | MS.gene46797:intron | 5.0% |
| !!! | TTTTTGAAATTTAATTTTTA+GGG | + | chr3.3:20698014-20698033 | MS.gene46797:intron | 5.0% |
| ACCTGACAAGCGTGGTGTAA+AGG | + | chr3.3:20698757-20698776 | MS.gene46797:CDS | 50.0% | |
| ACTTTAGCACTACGAGCCAC+AGG | - | chr3.3:20698698-20698717 | None:intergenic | 50.0% | |
| AGGGCAGGTTCTCACTGTAT+TGG | - | chr3.3:20699197-20699216 | None:intergenic | 50.0% | |
| ATGCAAGAGGCCATGGTTTC+TGG | + | chr3.3:20702734-20702753 | MS.gene46797:CDS | 50.0% | |
| CATCAGGACTCTACCGATGT+CGG | + | chr3.3:20698794-20698813 | MS.gene46797:CDS | 50.0% | |
| CCGATTTCCATTGCAGAGGT+TGG | - | chr3.3:20699166-20699185 | None:intergenic | 50.0% | |
| CCTGACAAGCGTGGTGTAAA+GGG | + | chr3.3:20698758-20698777 | MS.gene46797:CDS | 50.0% | |
| GAATACGAGAACATCCACCG+GGG | - | chr3.3:20698886-20698905 | None:intergenic | 50.0% | |
| GATGTCGGTGAATCCAGTAC+TGG | + | chr3.3:20698809-20698828 | MS.gene46797:CDS | 50.0% | |
| GATTCCGACGATGAGGATGA+TGG | + | chr3.3:20702593-20702612 | MS.gene46797:CDS | 50.0% | |
| GCAACTAGCGGCTCTGTATT+AGG | - | chr3.3:20700828-20700847 | None:intergenic | 50.0% | |
| GCATTATCAGATTCGCTGGC+TGG | + | chr3.3:20702542-20702561 | MS.gene46797:CDS | 50.0% | |
| GGGTTTACAACGCAAGCATC+AGG | + | chr3.3:20698778-20698797 | MS.gene46797:CDS | 50.0% | |
| GGTGAGCTAAGGGACATCAA+AGG | - | chr3.3:20701341-20701360 | None:intergenic | 50.0% | |
| GTCGTTGTCAGTGTCCTTTC+TGG | + | chr3.3:20698469-20698488 | MS.gene46797:intron | 50.0% | |
| GTGGCAGTGGTTAAGGGTTT+CGG | - | chr3.3:20701923-20701942 | None:intergenic | 50.0% | |
| TAACTGCCCTGTGTTTCAGG+TGG | - | chr3.3:20702046-20702065 | None:intergenic | 50.0% | |
| TAATGCTGGACTGCTGGTAG+TGG | + | chr3.3:20701135-20701154 | MS.gene46797:intron | 50.0% | |
| TCGAATGGCTGCTATGCAAG+AGG | + | chr3.3:20702721-20702740 | MS.gene46797:CDS | 50.0% | |
| TCGAATGGCTGCTATGTCAG+AGG | + | chr3.3:20702628-20702647 | MS.gene46797:CDS | 50.0% | |
| TGAAGCCTGGCTCATACACA+TGG | + | chr3.3:20702363-20702382 | MS.gene46797:CDS | 50.0% | |
| TGCAAGAGGCCATGGTTTCT+GGG | + | chr3.3:20702735-20702754 | MS.gene46797:CDS | 50.0% | |
| TGCTTGTTCAGCAGCTAGCT+AGG | + | chr3.3:20701754-20701773 | MS.gene46797:intron | 50.0% | |
| TGGCAGTGGTTAAGGGTTTC+GGG | - | chr3.3:20701922-20701941 | None:intergenic | 50.0% | |
| TGGTCTAGCACTACCAGTAC+TGG | - | chr3.3:20698825-20698844 | None:intergenic | 50.0% | |
| TGTCTCCATGTGTATGAGCC+AGG | - | chr3.3:20702371-20702390 | None:intergenic | 50.0% | |
| TTCAGATTCTGCTGTGCCTG+TGG | + | chr3.3:20698679-20698698 | MS.gene46797:CDS | 50.0% | |
| ! | ATTTTGTCAGGTGGAGGTGG+TGG | - | chr3.3:20701971-20701990 | None:intergenic | 50.0% |
| ! | CTAGTGCTATGGCTTGTAGC+CGG | + | chr3.3:20701661-20701680 | MS.gene46797:intron | 50.0% |
| ! | CTGATGGCTTGGGTTTCGAA+AGG | - | chr3.3:20699066-20699085 | None:intergenic | 50.0% |
| ! | GCTCTTGGGATGGATGCTTT+TGG | + | chr3.3:20702656-20702675 | MS.gene46797:CDS | 50.0% |
| ! | TTATCAGATTCGCTGGCTGG+CGG | + | chr3.3:20702545-20702564 | MS.gene46797:CDS | 50.0% |
| ! | TTTTGTCTGCGTTGAGGTGG+TGG | - | chr3.3:20702401-20702420 | None:intergenic | 50.0% |
| !! | GTAGCTCAGTTGGTGAGCTA+AGG | - | chr3.3:20701352-20701371 | None:intergenic | 50.0% |
| !! | TGGGGCTAGCTGTTTCTACA+AGG | + | chr3.3:20699467-20699486 | MS.gene46797:CDS | 50.0% |
| !! | TGGTGGTGATGGAAGATGCT+TGG | - | chr3.3:20701954-20701973 | None:intergenic | 50.0% |
| !!! | TGGTTTTGTCTGCGTTGAGG+TGG | - | chr3.3:20702404-20702423 | None:intergenic | 50.0% |
| ACACCACGCTTGTCAGGTGA+AGG | - | chr3.3:20698755-20698774 | None:intergenic | 55.0% | |
| AGCATCCATCCCAAGAGCCA+TGG | - | chr3.3:20702654-20702673 | None:intergenic | 55.0% | |
| ATGTCAGAGGCCATGGCTCT+TGG | + | chr3.3:20702641-20702660 | MS.gene46797:CDS | 55.0% | |
| CAGTGGTTAAGGGTTTCGGG+AGG | - | chr3.3:20701919-20701938 | None:intergenic | 55.0% | |
| CATACACATGGAGACACCGC+AGG | + | chr3.3:20702375-20702394 | MS.gene46797:CDS | 55.0% | |
| CCCTTTACACCACGCTTGTC+AGG | - | chr3.3:20698761-20698780 | None:intergenic | 55.0% | |
| GAGTCAGTGTCGTGTCGTGT+CGG | - | chr3.3:20698390-20698409 | None:intergenic | 55.0% | |
| GCGCGAGGCGTATGTTTGAA+AGG | + | chr3.3:20698248-20698267 | MS.gene46797:CDS | 55.0% | |
| GTTAAGGGTTTCGGGAGGCT+AGG | - | chr3.3:20701914-20701933 | None:intergenic | 55.0% | |
| GTTCCTTCACCTGACAAGCG+TGG | + | chr3.3:20698749-20698768 | MS.gene46797:CDS | 55.0% | |
| GTTTCGGGAGGCTAGGACAA+TGG | - | chr3.3:20701907-20701926 | None:intergenic | 55.0% | |
| TAGTGCCCCAACCTCTGCAA+TGG | + | chr3.3:20699156-20699175 | MS.gene46797:CDS | 55.0% | |
| TGGCGGTTCAGGTCCTTGTT+TGG | + | chr3.3:20702562-20702581 | MS.gene46797:CDS | 55.0% | |
| TGTCAGAGGCCATGGCTCTT+GGG | + | chr3.3:20702642-20702661 | MS.gene46797:CDS | 55.0% | |
| ! | CATGTTGGATGTGCTCGGTG+AGG | + | chr3.3:20702439-20702458 | MS.gene46797:CDS | 55.0% |
| ! | CGTGTCGTGTCGGTGATTAG+AGG | - | chr3.3:20698380-20698399 | None:intergenic | 55.0% |
| ! | GGCGGTTCAGGTCCTTGTTT+GGG | + | chr3.3:20702563-20702582 | MS.gene46797:CDS | 55.0% |
| ! | TAGTTTGCGGCAAACAGGGC+AGG | - | chr3.3:20699212-20699231 | None:intergenic | 55.0% |
| AGAACATCCACCGGGGCAGT+TGG | - | chr3.3:20698879-20698898 | None:intergenic | 60.0% | |
| AGAGGCCATGGCTCTTGGGA+TGG | + | chr3.3:20702646-20702665 | MS.gene46797:CDS | 60.0% | |
| ATGCGCGCTAACCACGCATC+TGG | + | chr3.3:20699695-20699714 | MS.gene46797:intron | 60.0% | |
| GGCTGCTATGCAAGAGGCCA+TGG | + | chr3.3:20702727-20702746 | MS.gene46797:CDS | 60.0% | |
| GGCTGCTATGTCAGAGGCCA+TGG | + | chr3.3:20702634-20702653 | MS.gene46797:CDS | 60.0% | |
| GGGTGGAGGGGAGATGAAGT+TGG | - | chr3.3:20700522-20700541 | None:intergenic | 60.0% | |
| TCGGGAGGCTAGGACAATGG+TGG | - | chr3.3:20701904-20701923 | None:intergenic | 60.0% | |
| TTTGCTGCTGCCAACTGCCC+CGG | + | chr3.3:20698866-20698885 | MS.gene46797:CDS | 60.0% | |
| ! | TCAGGTGGAGGTGGTGGTGA+TGG | - | chr3.3:20701965-20701984 | None:intergenic | 60.0% |
| ! | GATTCGCTGGCTGGCGGTTC+AGG | + | chr3.3:20702551-20702570 | MS.gene46797:CDS | 65.0% |
| ! | TGCGTTGAGGTGGTGGCCTG+CGG | - | chr3.3:20702394-20702413 | None:intergenic | 65.0% |
| GCTGCTGCCAACTGCCCCGG+TGG | + | chr3.3:20698869-20698888 | MS.gene46797:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 20697648 | 20702904 | 20697648 | ID=MS.gene46797 |
| chr3.3 | mRNA | 20697648 | 20702904 | 20697648 | ID=MS.gene46797.t1;Parent=MS.gene46797 |
| chr3.3 | exon | 20697648 | 20697658 | 20697648 | ID=MS.gene46797.t1.exon1;Parent=MS.gene46797.t1 |
| chr3.3 | CDS | 20697648 | 20697658 | 20697648 | ID=cds.MS.gene46797.t1;Parent=MS.gene46797.t1 |
| chr3.3 | exon | 20698232 | 20698316 | 20698232 | ID=MS.gene46797.t1.exon2;Parent=MS.gene46797.t1 |
| chr3.3 | CDS | 20698232 | 20698316 | 20698232 | ID=cds.MS.gene46797.t1;Parent=MS.gene46797.t1 |
| chr3.3 | exon | 20698581 | 20699317 | 20698581 | ID=MS.gene46797.t1.exon3;Parent=MS.gene46797.t1 |
| chr3.3 | CDS | 20698581 | 20699317 | 20698581 | ID=cds.MS.gene46797.t1;Parent=MS.gene46797.t1 |
| chr3.3 | exon | 20699419 | 20699488 | 20699419 | ID=MS.gene46797.t1.exon4;Parent=MS.gene46797.t1 |
| chr3.3 | CDS | 20699419 | 20699488 | 20699419 | ID=cds.MS.gene46797.t1;Parent=MS.gene46797.t1 |
| chr3.3 | exon | 20702356 | 20702904 | 20702356 | ID=MS.gene46797.t1.exon5;Parent=MS.gene46797.t1 |
| chr3.3 | CDS | 20702356 | 20702904 | 20702356 | ID=cds.MS.gene46797.t1;Parent=MS.gene46797.t1 |
| Gene Sequence |
| Protein sequence |
