Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46819.t1 | XP_024626574.1 | 85.8 | 162 | 23 | 0 | 84 | 245 | 99 | 260 | 6.00E-72 | 282 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46819.t1 | Q9SZL8 | 36.0 | 172 | 107 | 3 | 104 | 273 | 77 | 247 | 5.6e-18 | 94.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46819.t1 | A0A072TYR1 | 86.2 | 159 | 22 | 0 | 84 | 242 | 104 | 262 | 2.8e-71 | 279.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene46819.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46819.t1 | MTR_7g028855 | 72.321 | 224 | 49 | 2 | 20 | 242 | 51 | 262 | 3.39e-103 | 318 |
| MS.gene46819.t1 | MTR_7g446520 | 65.854 | 246 | 57 | 3 | 45 | 284 | 33 | 257 | 6.25e-103 | 313 |
| MS.gene46819.t1 | MTR_7g446480 | 45.635 | 252 | 70 | 6 | 38 | 284 | 61 | 250 | 5.95e-53 | 182 |
| MS.gene46819.t1 | MTR_7g446510 | 67.568 | 111 | 33 | 1 | 177 | 284 | 155 | 265 | 5.20e-42 | 154 |
| MS.gene46819.t1 | MTR_7g446510 | 52.727 | 110 | 21 | 1 | 275 | 353 | 48 | 157 | 1.91e-24 | 104 |
| MS.gene46819.t1 | MTR_1g070355 | 37.013 | 154 | 97 | 0 | 102 | 255 | 76 | 229 | 2.94e-26 | 113 |
| MS.gene46819.t1 | MTR_5g076070 | 32.487 | 197 | 128 | 2 | 62 | 256 | 16 | 209 | 6.00e-25 | 105 |
| MS.gene46819.t1 | MTR_8g467420 | 52.113 | 71 | 34 | 0 | 83 | 153 | 61 | 131 | 1.34e-19 | 86.7 |
| MS.gene46819.t1 | MTR_6g022080 | 26.344 | 186 | 135 | 1 | 77 | 260 | 60 | 245 | 3.70e-17 | 81.6 |
| MS.gene46819.t1 | MTR_6g053140 | 31.395 | 172 | 97 | 5 | 47 | 211 | 47 | 204 | 9.13e-15 | 73.9 |
| MS.gene46819.t1 | MTR_0060s0090 | 38.750 | 80 | 49 | 0 | 103 | 182 | 59 | 138 | 1.08e-13 | 69.3 |
| MS.gene46819.t1 | MTR_0402s0040 | 32.530 | 166 | 100 | 4 | 104 | 264 | 30 | 188 | 1.28e-13 | 73.6 |
| MS.gene46819.t1 | MTR_3g448650 | 41.250 | 80 | 47 | 0 | 96 | 175 | 78 | 157 | 1.62e-12 | 66.6 |
| MS.gene46819.t1 | MTR_2g098880 | 38.532 | 109 | 65 | 2 | 94 | 201 | 55 | 162 | 3.62e-12 | 67.0 |
| MS.gene46819.t1 | MTR_3g080590 | 49.153 | 59 | 30 | 0 | 93 | 151 | 98 | 156 | 4.35e-12 | 64.7 |
| MS.gene46819.t1 | MTR_2g098880 | 38.532 | 109 | 65 | 2 | 94 | 201 | 67 | 174 | 4.90e-12 | 67.0 |
| MS.gene46819.t1 | MTR_2g101460 | 31.746 | 126 | 86 | 0 | 96 | 221 | 51 | 176 | 9.59e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46819.t1 | AT4G38180 | 38.710 | 155 | 92 | 3 | 104 | 256 | 77 | 230 | 3.51e-16 | 82.4 |
| MS.gene46819.t1 | AT1G10240 | 30.769 | 182 | 115 | 4 | 82 | 253 | 24 | 204 | 3.05e-12 | 69.7 |
| MS.gene46819.t1 | AT1G10240 | 30.769 | 182 | 115 | 4 | 82 | 253 | 24 | 204 | 3.05e-12 | 69.7 |
| MS.gene46819.t1 | AT3G07500 | 39.806 | 103 | 58 | 3 | 104 | 205 | 37 | 136 | 9.07e-12 | 65.1 |
Find 119 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCTTCTCCCACATCTTTC+TGG | 0.071584 | 3.3:+20317780 | None:intergenic |
| ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 3.3:+20317882 | None:intergenic |
| TGTTCACTACAAACCTAAAA+AGG | 0.164672 | 3.3:-20319752 | MS.gene46819:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | 3.3:-20319593 | MS.gene46819:CDS |
| CCCACGTCTTTCTGGCTATC+AGG | 0.264446 | 3.3:+20317890 | None:intergenic |
| ATCGTTCTCCCATGTCTCTT+TGG | 0.279158 | 3.3:+20317984 | None:intergenic |
| TGCATTTACACCCTGTTTAT+CGG | 0.290641 | 3.3:-20319666 | MS.gene46819:CDS |
| TTTGTTGCGTTGGACGAAAA+AGG | 0.308114 | 3.3:-20318395 | MS.gene46819:CDS |
| TTGCAGGGAAGTGTCCAAAA+AGG | 0.313369 | 3.3:-20318272 | MS.gene46819:CDS |
| CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 3.3:-20320008 | MS.gene46819:CDS |
| TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 3.3:-20320001 | MS.gene46819:CDS |
| GGGAGGAAACCCAAAGAAAA+AGG | 0.331670 | 3.3:-20317651 | MS.gene46819:CDS |
| CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | 3.3:-20319915 | MS.gene46819:CDS |
| TCCCATGTCTCTTTGGCTAT+CGG | 0.356980 | 3.3:+20317991 | None:intergenic |
| CCCATGTCTCTTTGGCTATC+GGG | 0.370715 | 3.3:+20317992 | None:intergenic |
| CATTGGTTGGAGTAGGTTCA+TGG | 0.373380 | 3.3:+20319692 | None:intergenic |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 3.3:-20319592 | MS.gene46819:CDS |
| GCTCAGAAGGGTGGATATCC+TGG | 0.409450 | 3.3:-20319559 | MS.gene46819:CDS |
| GGAAGTAGATTCAAAATTGA+TGG | 0.410232 | 3.3:-20318338 | MS.gene46819:CDS |
| GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 3.3:-20320279 | MS.gene46819:intron |
| AGATGTGGGAGAAGGATCAA+AGG | 0.425924 | 3.3:-20317774 | MS.gene46819:CDS |
| AGCATTTATCAAGGTTAGAT+AGG | 0.434364 | 3.3:-20319825 | MS.gene46819:CDS |
| TTGATGGAGATTGCTCGATA+TGG | 0.438349 | 3.3:-20318322 | MS.gene46819:CDS |
| TTGAGACATAGGCGCAGAAC+AGG | 0.443726 | 3.3:+20317628 | None:intergenic |
| CGAAGCTGCTGAAATCTATA+CGG | 0.445905 | 3.3:-20318634 | MS.gene46819:CDS |
| TGGCTAGCATGCTGAGACAT+GGG | 0.448232 | 3.3:+20317698 | None:intergenic |
| GATATTAGGCGCAATGTTAA+CGG | 0.449906 | 3.3:-20319901 | MS.gene46819:CDS |
| TTTAGGTGTGTTATATGGTA+CGG | 0.451619 | 3.3:-20321248 | None:intergenic |
| GAGAGATGAAGCATTTATCA+AGG | 0.455085 | 3.3:-20319834 | MS.gene46819:CDS |
| AAGGGTGGATATCCTGGTGT+TGG | 0.458467 | 3.3:-20319553 | MS.gene46819:CDS |
| TATAAGTACGGTAAGTGTAA+AGG | 0.460291 | 3.3:-20319943 | MS.gene46819:CDS |
| TGGCTAGCATGCTAAGACAT+GGG | 0.460484 | 3.3:+20317515 | None:intergenic |
| TAGTGAACACGGAGCCTAGC+TGG | 0.468270 | 3.3:+20319766 | None:intergenic |
| GTAGATAAAGCACAAATTGA+TGG | 0.469140 | 3.3:-20319631 | MS.gene46819:CDS |
| TCTTGAATGTGGACTATTGT+GGG | 0.469444 | 3.3:-20318360 | MS.gene46819:CDS |
| GGGATACACGGTGGCTCAGA+AGG | 0.471778 | 3.3:-20319572 | MS.gene46819:CDS |
| TGGCTAGCATGCTGAGACGT+GGG | 0.474444 | 3.3:+20317800 | None:intergenic |
| TTGGCTATCGGGCTGAGACA+TGG | 0.475904 | 3.3:+20318003 | None:intergenic |
| AGGGTGGATATCCTGGTGTT+GGG | 0.476260 | 3.3:-20319552 | MS.gene46819:intron |
| TGGCTAGCACTTTGAGACAT+AGG | 0.478703 | 3.3:+20317617 | None:intergenic |
| TTAGGTGTGTTATATGGTAC+GGG | 0.483038 | 3.3:-20321247 | None:intergenic |
| TTCTTGAATGTGGACTATTG+TGG | 0.490201 | 3.3:-20318361 | MS.gene46819:CDS |
| CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 3.3:+20318669 | None:intergenic |
| GCAGTATGTATGTAACAAGC+AGG | 0.502107 | 3.3:-20319863 | MS.gene46819:CDS |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 3.3:-20320043 | MS.gene46819:CDS |
| TGGCTATCGGGCTGAGACAT+GGG | 0.505485 | 3.3:+20318004 | None:intergenic |
| GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 3.3:-20318594 | MS.gene46819:CDS |
| GATGTGGGAGAAGGATCAAA+GGG | 0.516814 | 3.3:-20317773 | MS.gene46819:CDS |
| GACGTAGGAGAAGGATCAAA+GGG | 0.517308 | 3.3:-20317671 | MS.gene46819:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 3.3:-20320015 | MS.gene46819:CDS |
| TGAGACATGGGCACAGAAAG+AGG | 0.521366 | 3.3:+20318016 | None:intergenic |
| AGACGTAGGAGAAGGATCAA+AGG | 0.521535 | 3.3:-20317672 | MS.gene46819:CDS |
| TTGGCTAGCATGCTGAGACA+TGG | 0.524354 | 3.3:+20317697 | None:intergenic |
| TGGCTATCAGGCTGAGACAT+GGG | 0.531630 | 3.3:+20317902 | None:intergenic |
| AGACATGGGAGAACGATCAA+AGG | 0.531745 | 3.3:-20317978 | MS.gene46819:CDS |
| CTGGCTAGCATGCTGAGACG+TGG | 0.534344 | 3.3:+20317799 | None:intergenic |
| TGATAACAATTTAGCTGAAG+AGG | 0.537684 | 3.3:-20320070 | MS.gene46819:CDS |
| GCCCGATAGCCAAAGAGACA+TGG | 0.550075 | 3.3:-20317993 | MS.gene46819:CDS |
| AATTTGTGCTTTATCTACCT+CGG | 0.554314 | 3.3:+20319636 | None:intergenic |
| TTGGCTAGCATGCTAAGACA+TGG | 0.556417 | 3.3:+20317514 | None:intergenic |
| GACATGGGAGAACGATCAAA+GGG | 0.558476 | 3.3:-20317977 | MS.gene46819:CDS |
| AGCCAGAAAGACGTGGGAGA+AGG | 0.560631 | 3.3:-20317884 | MS.gene46819:CDS |
| TGTAAATGCACAACATTGGT+TGG | 0.560698 | 3.3:+20319679 | None:intergenic |
| GAAGATTGGTTTCTTGAATG+TGG | 0.561039 | 3.3:-20318371 | MS.gene46819:CDS |
| CTGGCTATCAGGCTGAGACA+TGG | 0.561329 | 3.3:+20317901 | None:intergenic |
| GAAGAGGATGATGTAGTTGT+TGG | 0.561733 | 3.3:-20320054 | MS.gene46819:CDS |
| GCATGCTAGCCAGAAAGATG+TGG | 0.561958 | 3.3:-20317789 | MS.gene46819:CDS |
| GACGTGGCAGAAGGATCAAA+GGG | 0.564360 | 3.3:-20317590 | MS.gene46819:CDS |
| AGACGTGGCAGAAGGATCAA+AGG | 0.567488 | 3.3:-20317591 | MS.gene46819:CDS |
| TTCTTAGTGAACCCAACACC+AGG | 0.567834 | 3.3:+20319541 | None:intergenic |
| ATATGGTACGGGCGGATGCA+TGG | 0.569419 | 3.3:-20321236 | MS.gene46819:intron |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 3.3:-20320038 | MS.gene46819:CDS |
| GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 3.3:+20318670 | None:intergenic |
| GCCTGATAGCCAGAAAGACG+TGG | 0.578633 | 3.3:-20317891 | MS.gene46819:CDS |
| GATGAAAGTCAAGGTGATGA+AGG | 0.579998 | 3.3:-20320234 | MS.gene46819:CDS |
| TTGACAAAATATCTTGAGGA+AGG | 0.583257 | 3.3:-20318516 | MS.gene46819:intron |
| TACACGGTGGCTCAGAAGGG+TGG | 0.585625 | 3.3:-20319568 | MS.gene46819:CDS |
| GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 3.3:-20320174 | MS.gene46819:CDS |
| GATGAACGTGAAGGTGATGA+AGG | 0.589312 | 3.3:-20320189 | MS.gene46819:CDS |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 3.3:-20320267 | MS.gene46819:CDS |
| GAAGGTGAACGTGATGAAGG+TGG | 0.592672 | 3.3:-20320171 | MS.gene46819:CDS |
| AGCCAGAAAGATGTGGGAGA+AGG | 0.595302 | 3.3:-20317782 | MS.gene46819:CDS |
| CAGTATGTATGTAACAAGCA+GGG | 0.595708 | 3.3:-20319862 | MS.gene46819:CDS |
| GTGGGAGAAGGATCAAAGGG+AGG | 0.602463 | 3.3:-20317770 | MS.gene46819:CDS |
| GGATACACGGTGGCTCAGAA+GGG | 0.606037 | 3.3:-20319571 | MS.gene46819:CDS |
| CCCGATAGCCAAAGAGACAT+GGG | 0.611728 | 3.3:-20317992 | MS.gene46819:CDS |
| AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 3.3:-20320093 | MS.gene46819:CDS |
| AGGGTGTAAATGCACAACAT+TGG | 0.627835 | 3.3:+20319675 | None:intergenic |
| AGAAAGATATTCAGTGCTTG+CGG | 0.628965 | 3.3:+20317928 | None:intergenic |
| GGATGATGTAGTTGTTGGTG+AGG | 0.631197 | 3.3:-20320049 | MS.gene46819:CDS |
| CATGCTAGCCAGAAAGATGT+GGG | 0.633149 | 3.3:-20317788 | MS.gene46819:CDS |
| TGCACAACATTGGTTGGAGT+AGG | 0.634569 | 3.3:+20319685 | None:intergenic |
| TTGTCATATAATGGGATACA+CGG | 0.634814 | 3.3:-20319584 | MS.gene46819:CDS |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 3.3:-20319780 | MS.gene46819:CDS |
| GGTGAACGTGATGAAGGTGG+AGG | 0.647603 | 3.3:-20320168 | MS.gene46819:CDS |
| AGTATGTATGTAACAAGCAG+GGG | 0.650597 | 3.3:-20319861 | MS.gene46819:CDS |
| GAAGTTGACAAAATATCTTG+AGG | 0.651334 | 3.3:-20318520 | MS.gene46819:CDS |
| CAAAGGGAGGCAAATCAAAG+AGG | 0.651344 | 3.3:-20317961 | MS.gene46819:CDS |
| GTTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 3.3:-20320102 | MS.gene46819:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 3.3:-20320132 | MS.gene46819:CDS |
| CTTGAATGTGGACTATTGTG+GGG | 0.678410 | 3.3:-20318359 | MS.gene46819:CDS |
| CAAAGGGAGGAAAATCAAAG+AGG | 0.680357 | 3.3:-20317757 | MS.gene46819:CDS |
| TTAACGGTGAGATTGTAATG+AGG | 0.680367 | 3.3:-20319885 | MS.gene46819:CDS |
| AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 3.3:-20318574 | MS.gene46819:CDS |
| GGTGTGTTATATGGTACGGG+CGG | 0.689269 | 3.3:-20321244 | None:intergenic |
| CCTGATAGCCAGAAAGACGT+GGG | 0.690821 | 3.3:-20317890 | MS.gene46819:CDS |
| AGTGAAGTTGATGAAAGTGA+AGG | 0.694719 | 3.3:-20320108 | MS.gene46819:CDS |
| GGTGGAGGTGATGAAAGTGA+AGG | 0.700815 | 3.3:-20320153 | MS.gene46819:CDS |
| ATGGGAGAACGATCAAAGGG+AGG | 0.704421 | 3.3:-20317974 | MS.gene46819:CDS |
| TGTTTATCGGAAAATATCCG+AGG | 0.704996 | 3.3:-20319653 | MS.gene46819:CDS |
| GTAGGAGAAGGATCAAAGGG+AGG | 0.705292 | 3.3:-20317668 | MS.gene46819:CDS |
| ATTGATGGTCTTCAGTCACA+CGG | 0.717148 | 3.3:-20319616 | MS.gene46819:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 3.3:-20320138 | MS.gene46819:CDS |
| GGTGAAAGTGATGAAAGTGA+AGG | 0.717258 | 3.3:-20320213 | MS.gene46819:CDS |
| AGTGAATGTGATGAAAGTCA+AGG | 0.717258 | 3.3:-20320243 | MS.gene46819:CDS |
| GTGGCAGAAGGATCAAAGGG+AGG | 0.718660 | 3.3:-20317587 | MS.gene46819:CDS |
| AGTGAAGGTGATGAACGTGA+AGG | 0.728116 | 3.3:-20320198 | MS.gene46819:CDS |
| TCATATAATGGGATACACGG+TGG | 0.735285 | 3.3:-20319581 | MS.gene46819:CDS |
| CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 3.3:+20318671 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr3.3:20318805-20318824 | MS.gene46819:intron | 15.0% |
| !!! | TGCAATTAAAATTAGTTTAA+GGG | + | chr3.3:20317591-20317610 | None:intergenic | 15.0% |
| !!! | TTTAAATTTTGTATTCCATA+TGG | - | chr3.3:20318183-20318202 | MS.gene46819:intron | 15.0% |
| !! | AAACAATAGAAACTTATATG+TGG | - | chr3.3:20319562-20319581 | MS.gene46819:CDS | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | - | chr3.3:20319563-20319582 | MS.gene46819:CDS | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr3.3:20319167-20319186 | MS.gene46819:intron | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr3.3:20319168-20319187 | MS.gene46819:intron | 20.0% |
| !! | ATATTACATGCAGAAAAAAT+AGG | + | chr3.3:20317911-20317930 | None:intergenic | 20.0% |
| !! | TTATGGTTTATATCTTCATT+TGG | - | chr3.3:20318127-20318146 | MS.gene46819:intron | 20.0% |
| !!! | ACATTTGAAATGTCTATTTT+GGG | - | chr3.3:20319380-20319399 | MS.gene46819:intron | 20.0% |
| !!! | GTGCAATTAAAATTAGTTTA+AGG | + | chr3.3:20317592-20317611 | None:intergenic | 20.0% |
| !!! | TTTTCTGCATGTAATATTAT+CGG | - | chr3.3:20317914-20317933 | MS.gene46819:CDS | 20.0% |
| ! | AAACAACAACAATGACTTTA+CGG | - | chr3.3:20318207-20318226 | MS.gene46819:intron | 25.0% |
| ! | AAATCATAACGAGTTATGTT+AGG | - | chr3.3:20319966-20319985 | MS.gene46819:CDS | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr3.3:20318745-20318764 | MS.gene46819:intron | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | chr3.3:20319874-20319893 | MS.gene46819:CDS | 25.0% |
| ! | GAAATCAAATACGGAAATTA+GGG | - | chr3.3:20317954-20317973 | MS.gene46819:CDS | 25.0% |
| ! | TTCAATACTGAATAGAACTT+AGG | - | chr3.3:20318068-20318087 | MS.gene46819:intron | 25.0% |
| ! | TTTCTGCATGTAATATTATC+GGG | - | chr3.3:20317915-20317934 | MS.gene46819:CDS | 25.0% |
| !! | AAAAATGTGTGCTGTTATTA+AGG | - | chr3.3:20319266-20319285 | MS.gene46819:intron | 25.0% |
| !! | AATTTTACGAAGAATACTCA+AGG | - | chr3.3:20318391-20318410 | MS.gene46819:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | chr3.3:20319776-20319795 | MS.gene46819:CDS | 25.0% |
| !! | ATGTGTTTACAAATTTTTGC+AGG | - | chr3.3:20320472-20320491 | MS.gene46819:intron | 25.0% |
| !! | ATTTTACGAAGAATACTCAA+GGG | - | chr3.3:20318392-20318411 | MS.gene46819:CDS | 25.0% |
| !! | GAACATTTTCTTACAAACTT+TGG | + | chr3.3:20320672-20320691 | None:intergenic | 25.0% |
| !! | TGTGTTTACAAATTTTTGCA+GGG | - | chr3.3:20320473-20320492 | MS.gene46819:intron | 25.0% |
| !! | TGTTTAGTGTTCATTGATTA+TGG | - | chr3.3:20318110-20318129 | MS.gene46819:intron | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | chr3.3:20319870-20319889 | None:intergenic | 25.0% |
| !!! | ACTAGTTTTCTAGATTGTAT+GGG | - | chr3.3:20319591-20319610 | MS.gene46819:CDS | 25.0% |
| !!! | AGTTTTTGATTTGCTGATTA+GGG | - | chr3.3:20318012-20318031 | MS.gene46819:CDS | 25.0% |
| !!! | ATTTCTGCATAATTTTGATG+AGG | - | chr3.3:20320009-20320028 | MS.gene46819:CDS | 25.0% |
| !!! | ATTTGGTTTGATAAGTGATT+AGG | - | chr3.3:20318144-20318163 | MS.gene46819:intron | 25.0% |
| !!! | GACATTTGAAATGTCTATTT+TGG | - | chr3.3:20319379-20319398 | MS.gene46819:intron | 25.0% |
| !!! | TAGTTTTTGATTTGCTGATT+AGG | - | chr3.3:20318011-20318030 | MS.gene46819:CDS | 25.0% |
| !!! | TTAGGATTGAATAGTTTTGT+TGG | - | chr3.3:20318086-20318105 | MS.gene46819:intron | 25.0% |
| !!! | TTTGGTTTGATAAGTGATTA+GGG | - | chr3.3:20318145-20318164 | MS.gene46819:intron | 25.0% |
| AAACATATCCGATCATTGTT+GGG | - | chr3.3:20318284-20318303 | MS.gene46819:CDS | 30.0% | |
| AAATACGGAAATTAGGGATT+AGG | - | chr3.3:20317960-20317979 | MS.gene46819:CDS | 30.0% | |
| AACTTGAAATACGAATCCAA+GGG | + | chr3.3:20317858-20317877 | None:intergenic | 30.0% | |
| AATACGGAAATTAGGGATTA+GGG | - | chr3.3:20317961-20317980 | MS.gene46819:CDS | 30.0% | |
| AATTTGTGCTTTATCTACCT+CGG | + | chr3.3:20319127-20319146 | None:intergenic | 30.0% | |
| AGCATTTATCAAGGTTAGAT+AGG | - | chr3.3:20318935-20318954 | MS.gene46819:intron | 30.0% | |
| CAAATATAACTGTTTGTGAG+TGG | + | chr3.3:20319521-20319540 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr3.3:20319519-20319538 | MS.gene46819:intron | 30.0% | |
| CAGTAATAGTTGGAATTTCA+GGG | + | chr3.3:20320572-20320591 | None:intergenic | 30.0% | |
| CATATGAGAACAAAGAATTG+TGG | - | chr3.3:20319873-20319892 | MS.gene46819:CDS | 30.0% | |
| CGAAATCAAATACGGAAATT+AGG | - | chr3.3:20317953-20317972 | MS.gene46819:CDS | 30.0% | |
| GAAGTTGACAAAATATCTTG+AGG | - | chr3.3:20320240-20320259 | MS.gene46819:CDS | 30.0% | |
| GAATATTCACAAAAGGAATG+TGG | + | chr3.3:20319345-20319364 | None:intergenic | 30.0% | |
| GCAACAAAATCAAACATTCT+GGG | + | chr3.3:20320353-20320372 | None:intergenic | 30.0% | |
| GGAAGTAGATTCAAAATTGA+TGG | - | chr3.3:20320422-20320441 | MS.gene46819:intron | 30.0% | |
| GTAAGAAAATGTTCAAACTG+TGG | - | chr3.3:20320678-20320697 | MS.gene46819:intron | 30.0% | |
| GTAGATAAAGCACAAATTGA+TGG | - | chr3.3:20319129-20319148 | MS.gene46819:intron | 30.0% | |
| GTGAAAGAAGAGATTATGAA+AGG | - | chr3.3:20320166-20320185 | MS.gene46819:CDS | 30.0% | |
| GTTCACTACAAACCTAAAAA+GGG | - | chr3.3:20319009-20319028 | MS.gene46819:intron | 30.0% | |
| TAGTGATTAAGTAGATTAGC+TGG | - | chr3.3:20318045-20318064 | MS.gene46819:intron | 30.0% | |
| TATAAGTACGGTAAGTGTAA+AGG | - | chr3.3:20318817-20318836 | MS.gene46819:intron | 30.0% | |
| TATTACTGGAAACTCAACAA+TGG | - | chr3.3:20320584-20320603 | MS.gene46819:intron | 30.0% | |
| TGATAACAATTTAGCTGAAG+AGG | - | chr3.3:20318690-20318709 | MS.gene46819:intron | 30.0% | |
| TGTTCACTACAAACCTAAAA+AGG | - | chr3.3:20319008-20319027 | MS.gene46819:intron | 30.0% | |
| TTGACAAAATATCTTGAGGA+AGG | - | chr3.3:20320244-20320263 | MS.gene46819:CDS | 30.0% | |
| ! | AACAATGACTTTACGGATTT+TGG | - | chr3.3:20318214-20318233 | MS.gene46819:intron | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | - | chr3.3:20319779-20319798 | MS.gene46819:CDS | 30.0% |
| ! | ACAACATATCTACCCTTTTT+AGG | + | chr3.3:20319024-20319043 | None:intergenic | 30.0% |
| ! | CAGAACATGTCTTTTTCTTT+GGG | + | chr3.3:20321202-20321221 | None:intergenic | 30.0% |
| ! | GATTAGGGTTTATCTCATTT+TGG | - | chr3.3:20318160-20318179 | MS.gene46819:intron | 30.0% |
| ! | TTGTCATATAATGGGATACA+CGG | - | chr3.3:20319176-20319195 | MS.gene46819:intron | 30.0% |
| !! | AAATGTCTATTTTGGGAAGA+TGG | - | chr3.3:20319387-20319406 | MS.gene46819:intron | 30.0% |
| !! | AATGTTTGATTTTGTTGCGT+TGG | - | chr3.3:20320355-20320374 | MS.gene46819:intron | 30.0% |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | chr3.3:20319417-20319436 | MS.gene46819:intron | 30.0% |
| !! | AGGATGATTTTGAAGAGTTT+TGG | - | chr3.3:20319799-20319818 | MS.gene46819:CDS | 30.0% |
| !! | ATGATTTTGAAGAGTTTTGG+GGG | - | chr3.3:20319802-20319821 | MS.gene46819:CDS | 30.0% |
| !! | GATGATTTTGAAGAGTTTTG+GGG | - | chr3.3:20319801-20319820 | MS.gene46819:CDS | 30.0% |
| !! | GGATGATTTTGAAGAGTTTT+GGG | - | chr3.3:20319800-20319819 | MS.gene46819:CDS | 30.0% |
| !! | TAATATTATCGGGATTGGTT+AGG | - | chr3.3:20317925-20317944 | MS.gene46819:CDS | 30.0% |
| !! | TTGTAGCTGATTTTAAATCC+AGG | - | chr3.3:20320059-20320078 | MS.gene46819:CDS | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | chr3.3:20319744-20319763 | MS.gene46819:CDS | 30.0% |
| !!! | CATTGTTGTTGTTTTCCATA+TGG | + | chr3.3:20318201-20318220 | None:intergenic | 30.0% |
| !!! | GACTAGTTTTCTAGATTGTA+TGG | - | chr3.3:20319590-20319609 | MS.gene46819:CDS | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr3.3:20319039-20319058 | MS.gene46819:intron | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | chr3.3:20319740-20319759 | MS.gene46819:CDS | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr3.3:20319038-20319057 | MS.gene46819:intron | 30.0% |
| !!! | TTTTAGGTTTGTAGTGAACA+CGG | + | chr3.3:20319008-20319027 | None:intergenic | 30.0% |
| AAGAATACTCAAGGGAATAC+AGG | - | chr3.3:20318400-20318419 | MS.gene46819:CDS | 35.0% | |
| ACGAGTTATGTTAGGAAGAA+AGG | - | chr3.3:20319974-20319993 | MS.gene46819:CDS | 35.0% | |
| AGAAAGAAAAGGGATGAAAG+GGG | + | chr3.3:20317723-20317742 | None:intergenic | 35.0% | |
| AGAAAGATATTCAGTGCTTG+CGG | + | chr3.3:20320835-20320854 | None:intergenic | 35.0% | |
| AGAACATGATTACGGTTCTA+CGG | - | chr3.3:20318243-20318262 | MS.gene46819:intron | 35.0% | |
| AGGTCATGCGAAATCAAATA+CGG | - | chr3.3:20317945-20317964 | MS.gene46819:CDS | 35.0% | |
| AGTATGTATGTAACAAGCAG+GGG | - | chr3.3:20318899-20318918 | MS.gene46819:intron | 35.0% | |
| AGTGAATGTGATGAAAGTCA+AGG | - | chr3.3:20318517-20318536 | MS.gene46819:CDS | 35.0% | |
| AGTGGCAGAATATTCACAAA+AGG | + | chr3.3:20319352-20319371 | None:intergenic | 35.0% | |
| CAGTATGTATGTAACAAGCA+GGG | - | chr3.3:20318898-20318917 | MS.gene46819:intron | 35.0% | |
| CATTAACTGCTGAAGGAATA+AGG | - | chr3.3:20318752-20318771 | MS.gene46819:intron | 35.0% | |
| CCAGTAATAGTTGGAATTTC+AGG | + | chr3.3:20320573-20320592 | None:intergenic | 35.0% | |
| CCTGAAATTCCAACTATTAC+TGG | - | chr3.3:20320570-20320589 | MS.gene46819:intron | 35.0% | |
| CGCAACAAAATCAAACATTC+TGG | + | chr3.3:20320354-20320373 | None:intergenic | 35.0% | |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr3.3:20318845-20318864 | MS.gene46819:intron | 35.0% | |
| GAAACATATCCGATCATTGT+TGG | - | chr3.3:20318283-20318302 | MS.gene46819:CDS | 35.0% | |
| GAACTTGAAATACGAATCCA+AGG | + | chr3.3:20317859-20317878 | None:intergenic | 35.0% | |
| GACAATGAAAGTGATTATGG+TGG | - | chr3.3:20318448-20318467 | MS.gene46819:intron | 35.0% | |
| GAGAAAGAAAAGGGATGAAA+GGG | + | chr3.3:20317724-20317743 | None:intergenic | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | chr3.3:20318859-20318878 | MS.gene46819:intron | 35.0% | |
| GCATGTAATATTATCGGGAT+TGG | - | chr3.3:20317920-20317939 | MS.gene46819:CDS | 35.0% | |
| GGAGACAATGAAAGTGATTA+TGG | - | chr3.3:20318445-20318464 | MS.gene46819:intron | 35.0% | |
| GTGAAGGAAAAAGAAGTGAT+TGG | - | chr3.3:20320202-20320221 | MS.gene46819:CDS | 35.0% | |
| GTTGAGTTTCCAGTAATAGT+TGG | + | chr3.3:20320582-20320601 | None:intergenic | 35.0% | |
| TCAAGTTCAACTGTGAAGTT+AGG | - | chr3.3:20317871-20317890 | MS.gene46819:CDS | 35.0% | |
| TGCATTTACACCCTGTTTAT+CGG | - | chr3.3:20319094-20319113 | MS.gene46819:intron | 35.0% | |
| TGCTCCAAAGAAGAAGTAAA+AGG | - | chr3.3:20320644-20320663 | MS.gene46819:intron | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | - | chr3.3:20318759-20318778 | MS.gene46819:intron | 35.0% | |
| TGTAAATGCACAACATTGGT+TGG | + | chr3.3:20319084-20319103 | None:intergenic | 35.0% | |
| TGTTTATCGGAAAATATCCG+AGG | - | chr3.3:20319107-20319126 | MS.gene46819:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr3.3:20318875-20318894 | MS.gene46819:intron | 35.0% | |
| ! | ATGTGTGCTGTTATTAAGGA+TGG | - | chr3.3:20319270-20319289 | MS.gene46819:intron | 35.0% |
| ! | CGGATATTTTCCGATAAACA+GGG | + | chr3.3:20319107-20319126 | None:intergenic | 35.0% |
| ! | GAGAGATGAAGCATTTATCA+AGG | - | chr3.3:20318926-20318945 | MS.gene46819:intron | 35.0% |
| ! | GCAGAACATGTCTTTTTCTT+TGG | + | chr3.3:20321203-20321222 | None:intergenic | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | + | chr3.3:20319108-20319127 | None:intergenic | 35.0% |
| ! | TCTTGAATGTGGACTATTGT+GGG | - | chr3.3:20320400-20320419 | MS.gene46819:intron | 35.0% |
| ! | TTCTTGAATGTGGACTATTG+TGG | - | chr3.3:20320399-20320418 | MS.gene46819:intron | 35.0% |
| !! | AATTTTGATGAGGCAATGAG+AGG | - | chr3.3:20320019-20320038 | MS.gene46819:CDS | 35.0% |
| !! | AGTGAAGTTGATGAAAGTGA+AGG | - | chr3.3:20318652-20318671 | MS.gene46819:CDS | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr3.3:20319530-20319549 | MS.gene46819:intron | 35.0% |
| !! | GAAGATTGGTTTCTTGAATG+TGG | - | chr3.3:20320389-20320408 | MS.gene46819:intron | 35.0% |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr3.3:20318481-20318500 | MS.gene46819:intron | 35.0% |
| !! | TTGATTTGCTGATTAGGGTT+CGG | - | chr3.3:20318017-20318036 | MS.gene46819:CDS | 35.0% |
| !!! | AGTGTAAAGGTTTTGCTGTT+AGG | - | chr3.3:20318830-20318849 | MS.gene46819:intron | 35.0% |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | chr3.3:20319860-20319879 | None:intergenic | 35.0% |
| ACAAAATCACCAACGGATAG+TGG | + | chr3.3:20319485-20319504 | None:intergenic | 40.0% | |
| AGGGTGTAAATGCACAACAT+TGG | + | chr3.3:20319088-20319107 | None:intergenic | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr3.3:20318622-20318641 | MS.gene46819:CDS | 40.0% | |
| AGTGATTATGGTGGTTGTTC+TGG | - | chr3.3:20318457-20318476 | MS.gene46819:intron | 40.0% | |
| ATTGCCTTGAGAACAATCCA+TGG | - | chr3.3:20319840-20319859 | MS.gene46819:CDS | 40.0% | |
| CAAAATCCTTCTACTCTGGT+GGG | + | chr3.3:20317751-20317770 | None:intergenic | 40.0% | |
| CAAAGGGAGGAAAATCAAAG+AGG | - | chr3.3:20321003-20321022 | MS.gene46819:intron | 40.0% | |
| CAGGAAATTTGAATCTCGAG+GGG | - | chr3.3:20320318-20320337 | MS.gene46819:intron | 40.0% | |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr3.3:20319624-20319643 | MS.gene46819:CDS | 40.0% | |
| CGAAGCTGCTGAAATCTATA+CGG | - | chr3.3:20320126-20320145 | MS.gene46819:CDS | 40.0% | |
| GAACAAATACCACTATCCGT+TGG | - | chr3.3:20319473-20319492 | MS.gene46819:intron | 40.0% | |
| GAAGAGGATGATGTAGTTGT+TGG | - | chr3.3:20318706-20318725 | MS.gene46819:intron | 40.0% | |
| GAATATTCTGCCACTGATGA+CGG | - | chr3.3:20319357-20319376 | MS.gene46819:intron | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr3.3:20318526-20318545 | MS.gene46819:CDS | 40.0% | |
| GATGAGCGATATGATGAAAC+TGG | - | chr3.3:20318424-20318443 | MS.gene46819:intron | 40.0% | |
| GCAGGAAATTTGAATCTCGA+GGG | - | chr3.3:20320317-20320336 | MS.gene46819:intron | 40.0% | |
| GCAGTATGTATGTAACAAGC+AGG | - | chr3.3:20318897-20318916 | MS.gene46819:intron | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | - | chr3.3:20319713-20319732 | MS.gene46819:CDS | 40.0% | |
| GGAGAAAGAAAAGGGATGAA+AGG | + | chr3.3:20317725-20317744 | None:intergenic | 40.0% | |
| GGATGGCATACAAAAGCTTT+AGG | - | chr3.3:20320533-20320552 | MS.gene46819:intron | 40.0% | |
| GGTACACCAGAACATGATTA+CGG | - | chr3.3:20318235-20318254 | MS.gene46819:intron | 40.0% | |
| GGTGAAAGTGATGAAAGTGA+AGG | - | chr3.3:20318547-20318566 | MS.gene46819:CDS | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr3.3:20318493-20318512 | MS.gene46819:intron | 40.0% | |
| GTACAAGTAAGTTTGCCTGA+AGG | + | chr3.3:20317563-20317582 | None:intergenic | 40.0% | |
| GTAGAACCGTAATCATGTTC+TGG | + | chr3.3:20318244-20318263 | None:intergenic | 40.0% | |
| TACATGCGTGACGATTTCTT+TGG | - | chr3.3:20319905-20319924 | MS.gene46819:CDS | 40.0% | |
| TAGGTTTCAGCAAGAACAGA+GGG | + | chr3.3:20317700-20317719 | None:intergenic | 40.0% | |
| TGCAGGAAATTTGAATCTCG+AGG | - | chr3.3:20320316-20320335 | MS.gene46819:intron | 40.0% | |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr3.3:20318472-20318491 | MS.gene46819:intron | 40.0% | |
| TTGATGGAGATTGCTCGATA+TGG | - | chr3.3:20320438-20320457 | MS.gene46819:intron | 40.0% | |
| TTGCCTTGAGAACAATCCAT+GGG | - | chr3.3:20319841-20319860 | MS.gene46819:CDS | 40.0% | |
| TTTCAAATGTCCGTCATCAG+TGG | + | chr3.3:20319370-20319389 | None:intergenic | 40.0% | |
| TTTGTTGCGTTGGACGAAAA+AGG | - | chr3.3:20320365-20320384 | MS.gene46819:intron | 40.0% | |
| ! | AATCAAACATTCTGGGAGCA+TGG | + | chr3.3:20320346-20320365 | None:intergenic | 40.0% |
| ! | AGTGTCTGTGGAACATTTTC+TGG | + | chr3.3:20320721-20320740 | None:intergenic | 40.0% |
| ! | ATCCTTCTCCTACGTCTTTT+TGG | + | chr3.3:20321085-20321104 | None:intergenic | 40.0% |
| ! | ATTGATGGTCTTCAGTCACA+CGG | - | chr3.3:20319144-20319163 | MS.gene46819:intron | 40.0% |
| ! | CAGAACAGGCCTTTTTCTTT+GGG | + | chr3.3:20321121-20321140 | None:intergenic | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr3.3:20319627-20319646 | None:intergenic | 40.0% |
| ! | CTTGAATGTGGACTATTGTG+GGG | - | chr3.3:20320401-20320420 | MS.gene46819:intron | 40.0% |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr3.3:20318367-20318386 | MS.gene46819:CDS | 40.0% |
| ! | GGTGCCTTTTACTTCTTCTT+TGG | + | chr3.3:20320651-20320670 | None:intergenic | 40.0% |
| ! | GTTGATGAAAGTGAAGGTCA+TGG | - | chr3.3:20318658-20318677 | MS.gene46819:CDS | 40.0% |
| ! | TAACCCATGGATTGTTCTCA+AGG | + | chr3.3:20319847-20319866 | None:intergenic | 40.0% |
| ! | TCATATAATGGGATACACGG+TGG | - | chr3.3:20319179-20319198 | MS.gene46819:intron | 40.0% |
| ! | TGCATACAACCTACCCTTTT+TGG | + | chr3.3:20320505-20320524 | None:intergenic | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr3.3:20318717-20318736 | MS.gene46819:intron | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr3.3:20318722-20318741 | MS.gene46819:intron | 40.0% |
| !! | AGATGGTGATGGTTCTATGA+GGG | - | chr3.3:20319641-20319660 | MS.gene46819:CDS | 40.0% |
| !! | TGATTTGCTGATTAGGGTTC+GGG | - | chr3.3:20318018-20318037 | MS.gene46819:CDS | 40.0% |
| !! | TTATTTCTGCTTTGGCGATG+TGG | - | chr3.3:20319425-20319444 | MS.gene46819:intron | 40.0% |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr3.3:20319486-20319505 | MS.gene46819:intron | 40.0% |
| AAGTGCTAGCCAAAAAGACG+TGG | - | chr3.3:20321154-20321173 | MS.gene46819:intron | 45.0% | |
| AGAAAAGGGATGAAAGGGGT+AGG | + | chr3.3:20317719-20317738 | None:intergenic | 45.0% | |
| AGAAAGAGGTTCAGTGTCTG+TGG | + | chr3.3:20320733-20320752 | None:intergenic | 45.0% | |
| AGACATGGGAGAACGATCAA+AGG | - | chr3.3:20320782-20320801 | MS.gene46819:intron | 45.0% | |
| AGACGTAGGAGAAGGATCAA+AGG | - | chr3.3:20321088-20321107 | MS.gene46819:intron | 45.0% | |
| AGATGTGGGAGAAGGATCAA+AGG | - | chr3.3:20320986-20321005 | MS.gene46819:intron | 45.0% | |
| AGCCAAAAAGACGTAGGAGA+AGG | - | chr3.3:20321080-20321099 | MS.gene46819:intron | 45.0% | |
| AGGTTTCAGCAAGAACAGAG+GGG | + | chr3.3:20317699-20317718 | None:intergenic | 45.0% | |
| AGTACGCGTCATTGTCTATG+TGG | - | chr3.3:20319687-20319706 | MS.gene46819:CDS | 45.0% | |
| AGTGAAGGTGATGAACGTGA+AGG | - | chr3.3:20318562-20318581 | MS.gene46819:CDS | 45.0% | |
| ATCCTTCTCCCACATCTTTC+TGG | + | chr3.3:20320983-20321002 | None:intergenic | 45.0% | |
| ATCGTTCTCCCATGTCTCTT+TGG | + | chr3.3:20320779-20320798 | None:intergenic | 45.0% | |
| ATGCGTGACGATTTCTTTGG+TGG | - | chr3.3:20319908-20319927 | MS.gene46819:CDS | 45.0% | |
| CAAAGGGAGGCAAATCAAAG+AGG | - | chr3.3:20320799-20320818 | MS.gene46819:intron | 45.0% | |
| CAGCAATTCAGTGTTCATGC+AGG | - | chr3.3:20320299-20320318 | MS.gene46819:intron | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr3.3:20319492-20319511 | None:intergenic | 45.0% | |
| CATAGACAATGACGCGTACT+TGG | + | chr3.3:20319687-20319706 | None:intergenic | 45.0% | |
| CATGCTAGCCAAAAAGACGT+AGG | - | chr3.3:20321074-20321093 | MS.gene46819:intron | 45.0% | |
| CATGCTAGCCAGAAAGATGT+GGG | - | chr3.3:20320972-20320991 | MS.gene46819:intron | 45.0% | |
| CCATTGCCAGTGAAGTGTAA+AGG | - | chr3.3:20320621-20320640 | MS.gene46819:intron | 45.0% | |
| CCTTTACACTTCACTGGCAA+TGG | + | chr3.3:20320624-20320643 | None:intergenic | 45.0% | |
| GACATGGGAGAACGATCAAA+GGG | - | chr3.3:20320783-20320802 | MS.gene46819:intron | 45.0% | |
| GACGTAGGAGAAGGATCAAA+GGG | - | chr3.3:20321089-20321108 | MS.gene46819:intron | 45.0% | |
| GAGGCAAAATCCTTCTACTC+TGG | + | chr3.3:20317755-20317774 | None:intergenic | 45.0% | |
| GATGAACGTGAAGGTGATGA+AGG | - | chr3.3:20318571-20318590 | MS.gene46819:CDS | 45.0% | |
| GATGAAGGTGAACGTGATGA+AGG | - | chr3.3:20318586-20318605 | MS.gene46819:CDS | 45.0% | |
| GATGTGGGAGAAGGATCAAA+GGG | - | chr3.3:20320987-20321006 | MS.gene46819:intron | 45.0% | |
| GCAAAATCCTTCTACTCTGG+TGG | + | chr3.3:20317752-20317771 | None:intergenic | 45.0% | |
| GCAGTTGTAACAGATGGTGA+TGG | - | chr3.3:20319630-20319649 | MS.gene46819:CDS | 45.0% | |
| GGATGATGTAGTTGTTGGTG+AGG | - | chr3.3:20318711-20318730 | MS.gene46819:intron | 45.0% | |
| GGGAGGAAACCCAAAGAAAA+AGG | - | chr3.3:20321109-20321128 | MS.gene46819:intron | 45.0% | |
| GGTATGTACTGTGTTCCTTC+AGG | - | chr3.3:20317545-20317564 | MS.gene46819:CDS | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr3.3:20318628-20318647 | MS.gene46819:CDS | 45.0% | |
| GTAGGTTTCAGCAAGAACAG+AGG | + | chr3.3:20317701-20317720 | None:intergenic | 45.0% | |
| GTGGGAGAGGAGAAAGAAAA+GGG | + | chr3.3:20317733-20317752 | None:intergenic | 45.0% | |
| TAGGTTGTATGCAGATGTGC+TGG | - | chr3.3:20320512-20320531 | MS.gene46819:intron | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | - | chr3.3:20318289-20318308 | MS.gene46819:CDS | 45.0% | |
| TCCCATGTCTCTTTGGCTAT+CGG | + | chr3.3:20320772-20320791 | None:intergenic | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr3.3:20318249-20318268 | MS.gene46819:intron | 45.0% | |
| TGGACGAAAAAGGCGAAGAT+TGG | - | chr3.3:20320375-20320394 | MS.gene46819:intron | 45.0% | |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr3.3:20319653-20319672 | MS.gene46819:CDS | 45.0% | |
| TTCTTAGTGAACCCAACACC+AGG | + | chr3.3:20319222-20319241 | None:intergenic | 45.0% | |
| TTGTATGCAGATGTGCTGGA+TGG | - | chr3.3:20320516-20320535 | MS.gene46819:intron | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | - | chr3.3:20318637-20318656 | MS.gene46819:CDS | 45.0% |
| ! | ATCCTTCTGCCACGTCTTTT+TGG | + | chr3.3:20321166-20321185 | None:intergenic | 45.0% |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr3.3:20319071-20319090 | None:intergenic | 45.0% |
| ! | GCAGAACAGGCCTTTTTCTT+TGG | + | chr3.3:20321122-20321141 | None:intergenic | 45.0% |
| ! | TGCACAACATTGGTTGGAGT+AGG | + | chr3.3:20319078-20319097 | None:intergenic | 45.0% |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr3.3:20319536-20319555 | MS.gene46819:intron | 45.0% |
| !! | CAGATGGTGATGGTTCTATG+AGG | - | chr3.3:20319640-20319659 | MS.gene46819:CDS | 45.0% |
| !! | TGCAGGGAAGTGTCCAAAAA+GGG | - | chr3.3:20320489-20320508 | MS.gene46819:intron | 45.0% |
| !! | TGGCTAGCACTTTGAGACAT+AGG | + | chr3.3:20321146-20321165 | None:intergenic | 45.0% |
| !! | TTGCAGGGAAGTGTCCAAAA+AGG | - | chr3.3:20320488-20320507 | MS.gene46819:intron | 45.0% |
| !!! | TTGAAGAGTTTTGGGGGACT+TGG | - | chr3.3:20319808-20319827 | MS.gene46819:CDS | 45.0% |
| AAGGGCAACGATCGGGAAAA+GGG | + | chr3.3:20317787-20317806 | None:intergenic | 50.0% | |
| AAGGGCAACGATCGGGAAAT+AGG | + | chr3.3:20317840-20317859 | None:intergenic | 50.0% | |
| AAGGGTGGATATCCTGGTGT+TGG | - | chr3.3:20319207-20319226 | MS.gene46819:intron | 50.0% | |
| ACGAATCCAAGGGCAACGAT+CGG | + | chr3.3:20317848-20317867 | None:intergenic | 50.0% | |
| AGACGTGGCAGAAGGATCAA+AGG | - | chr3.3:20321169-20321188 | MS.gene46819:intron | 50.0% | |
| AGATTGGAGACGACGATGGA+AGG | + | chr3.3:20317806-20317825 | None:intergenic | 50.0% | |
| AGCCAAAAAGACGTGGCAGA+AGG | - | chr3.3:20321161-20321180 | MS.gene46819:intron | 50.0% | |
| AGCCAGAAAGATGTGGGAGA+AGG | - | chr3.3:20320978-20320997 | MS.gene46819:intron | 50.0% | |
| AGGGATTAGGGTAGATTCGC+TGG | - | chr3.3:20317973-20317992 | MS.gene46819:CDS | 50.0% | |
| AGGGCAACGATCGGGAAATA+GGG | + | chr3.3:20317839-20317858 | None:intergenic | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | - | chr3.3:20319208-20319227 | MS.gene46819:intron | 50.0% | |
| ATAGGGTGGAGACTGGAGAT+TGG | + | chr3.3:20317822-20317841 | None:intergenic | 50.0% | |
| ATCCTTCTCCCACGTCTTTC+TGG | + | chr3.3:20320881-20320900 | None:intergenic | 50.0% | |
| ATCGGGAAAAGGGTGGAGAT+TGG | + | chr3.3:20317777-20317796 | None:intergenic | 50.0% | |
| ATGGGAGAACGATCAAAGGG+AGG | - | chr3.3:20320786-20320805 | MS.gene46819:intron | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr3.3:20320092-20320111 | None:intergenic | 50.0% | |
| CCACCACTCCCAACAATGAT+CGG | + | chr3.3:20318295-20318314 | None:intergenic | 50.0% | |
| CCCATGTCTCTTTGGCTATC+GGG | + | chr3.3:20320771-20320790 | None:intergenic | 50.0% | |
| CCCGATAGCCAAAGAGACAT+GGG | - | chr3.3:20320768-20320787 | MS.gene46819:intron | 50.0% | |
| CCTGATAGCCAGAAAGACGT+GGG | - | chr3.3:20320870-20320889 | MS.gene46819:intron | 50.0% | |
| CGCGTCATTGTCTATGTGGT+TGG | - | chr3.3:20319691-20319710 | MS.gene46819:CDS | 50.0% | |
| CTGGCAATGGATCACGTATG+TGG | + | chr3.3:20320611-20320630 | None:intergenic | 50.0% | |
| GAAGGTGAACGTGATGAAGG+TGG | - | chr3.3:20318589-20318608 | MS.gene46819:CDS | 50.0% | |
| GACGTGGCAGAAGGATCAAA+GGG | - | chr3.3:20321170-20321189 | MS.gene46819:intron | 50.0% | |
| GATTGGAGACGACGATGGAA+GGG | + | chr3.3:20317805-20317824 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr3.3:20320093-20320112 | None:intergenic | 50.0% | |
| GCATGCTAGCCAGAAAGATG+TGG | - | chr3.3:20320971-20320990 | MS.gene46819:intron | 50.0% | |
| GGTGGAGGTGATGAAAGTGA+AGG | - | chr3.3:20318607-20318626 | MS.gene46819:CDS | 50.0% | |
| GGTGGGAGAGGAGAAAGAAA+AGG | + | chr3.3:20317734-20317753 | None:intergenic | 50.0% | |
| GTAGGAGAAGGATCAAAGGG+AGG | - | chr3.3:20321092-20321111 | MS.gene46819:intron | 50.0% | |
| TATGAGGGAGGCGATAAAGG+CGG | - | chr3.3:20319656-20319675 | MS.gene46819:CDS | 50.0% | |
| TATTTCCCGATCGTTGCCCT+TGG | - | chr3.3:20317839-20317858 | MS.gene46819:CDS | 50.0% | |
| TGAGACATGGGCACAGAAAG+AGG | + | chr3.3:20320747-20320766 | None:intergenic | 50.0% | |
| TGGCTAGCATGCTGAGACAT+GGG | + | chr3.3:20321065-20321084 | None:intergenic | 50.0% | |
| TGGCTATCAGGCTGAGACAT+GGG | + | chr3.3:20320861-20320880 | None:intergenic | 50.0% | |
| TTGAGACATAGGCGCAGAAC+AGG | + | chr3.3:20321135-20321154 | None:intergenic | 50.0% | |
| TTGGCTAGCATGCTGAGACA+TGG | + | chr3.3:20321066-20321085 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr3.3:20320186-20320205 | MS.gene46819:CDS | 50.0% |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr3.3:20318980-20318999 | MS.gene46819:intron | 50.0% |
| ! | GGAGCACCTTTACACTTCAC+TGG | + | chr3.3:20320630-20320649 | None:intergenic | 50.0% |
| !! | GGGAAGTGTCCAAAAAGGGT+AGG | - | chr3.3:20320493-20320512 | MS.gene46819:intron | 50.0% |
| !! | TGGTGATGGTTCTATGAGGG+AGG | - | chr3.3:20319644-20319663 | MS.gene46819:CDS | 50.0% |
| !!! | AGTTTTGGGGGACTTGGTGA+GGG | - | chr3.3:20319814-20319833 | MS.gene46819:CDS | 50.0% |
| ACGATGGAAGGGCAACGATC+GGG | + | chr3.3:20317794-20317813 | None:intergenic | 55.0% | |
| AGCCAGAAAGACGTGGGAGA+AGG | - | chr3.3:20320876-20320895 | MS.gene46819:intron | 55.0% | |
| CAGCACAGGGGATGAAAACC+TGG | + | chr3.3:20320080-20320099 | None:intergenic | 55.0% | |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr3.3:20318292-20318311 | MS.gene46819:CDS | 55.0% | |
| CGAATCCAAGGGCAACGATC+GGG | + | chr3.3:20317847-20317866 | None:intergenic | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | + | chr3.3:20320094-20320113 | None:intergenic | 55.0% | |
| CTGGAGATTGGAGACGACGA+TGG | + | chr3.3:20317810-20317829 | None:intergenic | 55.0% | |
| CTGGCTATCAGGCTGAGACA+TGG | + | chr3.3:20320862-20320881 | None:intergenic | 55.0% | |
| GAAGGGCAACGATCGGGAAA+AGG | + | chr3.3:20317788-20317807 | None:intergenic | 55.0% | |
| GACGATGGAAGGGCAACGAT+CGG | + | chr3.3:20317795-20317814 | None:intergenic | 55.0% | |
| GCAACGATCGGGAAATAGGG+TGG | + | chr3.3:20317836-20317855 | None:intergenic | 55.0% | |
| GCCCGATAGCCAAAGAGACA+TGG | - | chr3.3:20320767-20320786 | MS.gene46819:intron | 55.0% | |
| GCCTGATAGCCAGAAAGACG+TGG | - | chr3.3:20320869-20320888 | MS.gene46819:intron | 55.0% | |
| GCTCAGAAGGGTGGATATCC+TGG | - | chr3.3:20319201-20319220 | MS.gene46819:intron | 55.0% | |
| GGATACACGGTGGCTCAGAA+GGG | - | chr3.3:20319189-20319208 | MS.gene46819:intron | 55.0% | |
| GGGAAAAGGGTGGAGATTGG+AGG | + | chr3.3:20317774-20317793 | None:intergenic | 55.0% | |
| GGTGAACGTGATGAAGGTGG+AGG | - | chr3.3:20318592-20318611 | MS.gene46819:CDS | 55.0% | |
| GTGGCAGAAGGATCAAAGGG+AGG | - | chr3.3:20321173-20321192 | MS.gene46819:intron | 55.0% | |
| GTGGGAGAAGGATCAAAGGG+AGG | - | chr3.3:20320990-20321009 | MS.gene46819:intron | 55.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr3.3:20318997-20319016 | None:intergenic | 55.0% | |
| TCCTCTCCCACCAGAGTAGA+AGG | - | chr3.3:20317742-20317761 | MS.gene46819:CDS | 55.0% | |
| TCCTTCTACTCTGGTGGGAG+AGG | + | chr3.3:20317746-20317765 | None:intergenic | 55.0% | |
| TCGGGAAATAGGGTGGAGAC+TGG | + | chr3.3:20317829-20317848 | None:intergenic | 55.0% | |
| TGGCTAGCATGCTGAGACGT+GGG | + | chr3.3:20320963-20320982 | None:intergenic | 55.0% | |
| TGGCTATCGGGCTGAGACAT+GGG | + | chr3.3:20320759-20320778 | None:intergenic | 55.0% | |
| TTGGCTATCGGGCTGAGACA+TGG | + | chr3.3:20320760-20320779 | None:intergenic | 55.0% | |
| !! | CCCACGTCTTTCTGGCTATC+AGG | + | chr3.3:20320873-20320892 | None:intergenic | 55.0% |
| !!! | GAGTTTTGGGGGACTTGGTG+AGG | - | chr3.3:20319813-20319832 | MS.gene46819:CDS | 55.0% |
| CTGGCTAGCATGCTGAGACG+TGG | + | chr3.3:20320964-20320983 | None:intergenic | 60.0% | |
| GGCAACGATCGGGAAAAGGG+TGG | + | chr3.3:20317784-20317803 | None:intergenic | 60.0% | |
| GGGATACACGGTGGCTCAGA+AGG | - | chr3.3:20319188-20319207 | MS.gene46819:intron | 60.0% | |
| TACACGGTGGCTCAGAAGGG+TGG | - | chr3.3:20319192-20319211 | MS.gene46819:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 20317526 | 20321256 | 20317526 | ID=MS.gene46819 |
| chr3.3 | mRNA | 20317526 | 20321256 | 20317526 | ID=MS.gene46819.t1;Parent=MS.gene46819 |
| chr3.3 | exon | 20321237 | 20321256 | 20321237 | ID=MS.gene46819.t1.exon1;Parent=MS.gene46819.t1 |
| chr3.3 | CDS | 20321237 | 20321256 | 20321237 | ID=cds.MS.gene46819.t1;Parent=MS.gene46819.t1 |
| chr3.3 | exon | 20319553 | 20320293 | 20319553 | ID=MS.gene46819.t1.exon2;Parent=MS.gene46819.t1 |
| chr3.3 | CDS | 20319553 | 20320293 | 20319553 | ID=cds.MS.gene46819.t1;Parent=MS.gene46819.t1 |
| chr3.3 | exon | 20318517 | 20318701 | 20318517 | ID=MS.gene46819.t1.exon3;Parent=MS.gene46819.t1 |
| chr3.3 | CDS | 20318517 | 20318701 | 20318517 | ID=cds.MS.gene46819.t1;Parent=MS.gene46819.t1 |
| chr3.3 | exon | 20318272 | 20318427 | 20318272 | ID=MS.gene46819.t1.exon4;Parent=MS.gene46819.t1 |
| chr3.3 | CDS | 20318272 | 20318427 | 20318272 | ID=cds.MS.gene46819.t1;Parent=MS.gene46819.t1 |
| chr3.3 | exon | 20317526 | 20318046 | 20317526 | ID=MS.gene46819.t1.exon5;Parent=MS.gene46819.t1 |
| chr3.3 | CDS | 20317526 | 20318046 | 20317526 | ID=cds.MS.gene46819.t1;Parent=MS.gene46819.t1 |
| Gene Sequence |
| Protein sequence |
