AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47046

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47046.t1 MTR_5g088610 91.765 170 12 1 1 170 1 168 2.93e-109 316
MS.gene47046.t1 MTR_5g062790 67.403 181 43 3 1 170 1 176 5.34e-78 235
MS.gene47046.t1 MTR_5g488170 67.647 170 41 2 12 170 13 179 1.43e-75 227
MS.gene47046.t1 MTR_5g088080 67.647 170 41 2 12 170 13 179 4.69e-75 226
MS.gene47046.t1 MTR_5g088150 67.647 170 41 2 12 170 13 179 4.69e-75 226
MS.gene47046.t1 MTR_5g488210 67.647 170 41 2 12 170 13 179 4.69e-75 226
MS.gene47046.t1 MTR_5g088640 67.647 170 41 2 12 170 13 179 8.81e-75 226
MS.gene47046.t1 MTR_1g085880 66.480 179 50 4 1 170 1 178 3.61e-67 204
MS.gene47046.t1 MTR_1g085770 66.480 179 50 4 1 170 1 178 6.44e-66 204
MS.gene47046.t1 MTR_4g128190 62.893 159 44 3 1 158 1 145 6.85e-61 189
MS.gene47046.t1 MTR_8g042410 42.073 164 86 4 11 167 37 198 3.99e-36 132
MS.gene47046.t1 MTR_1g083630 45.399 163 82 3 11 167 12 173 2.47e-35 130
MS.gene47046.t1 MTR_3g052430 49.580 119 59 1 11 129 41 158 1.16e-34 127
MS.gene47046.t1 MTR_4g091490 49.194 124 61 2 8 130 10 132 1.40e-34 125
MS.gene47046.t1 MTR_3g011610 38.764 178 100 5 11 183 37 210 1.75e-34 127
MS.gene47046.t1 MTR_1g021230 47.581 124 64 1 11 134 57 179 1.95e-34 126
MS.gene47046.t1 MTR_3g052450 51.818 110 52 1 11 120 40 148 6.61e-34 125
MS.gene47046.t1 MTR_2g011660 51.724 116 54 2 8 122 10 124 8.80e-34 122
MS.gene47046.t1 MTR_2g089620 49.180 122 60 2 10 130 11 131 9.01e-34 122
MS.gene47046.t1 MTR_2g088170 51.304 115 55 1 10 124 28 141 3.77e-33 122
MS.gene47046.t1 MTR_1g017000 37.209 172 104 3 11 179 12 182 6.24e-33 118
MS.gene47046.t1 MTR_7g076740 50.862 116 54 3 9 122 10 124 7.18e-33 119
MS.gene47046.t1 MTR_1g100653 45.946 111 59 1 10 120 11 120 7.87e-33 119
MS.gene47046.t1 MTR_5g007370 44.755 143 76 3 1 142 2 142 9.60e-33 119
MS.gene47046.t1 MTR_1g043080 49.057 106 53 1 9 114 10 114 1.83e-32 117
MS.gene47046.t1 MTR_4g478180 40.854 164 89 4 10 167 12 173 2.87e-32 119
MS.gene47046.t1 MTR_5g029840 50.877 114 54 2 10 122 11 123 4.62e-32 117
MS.gene47046.t1 MTR_0008s0280 47.899 119 61 1 10 128 11 128 5.11e-32 115
MS.gene47046.t1 MTR_7g087130 41.060 151 80 4 10 160 11 152 1.10e-31 117
MS.gene47046.t1 MTR_1g076150 49.524 105 52 1 10 114 11 114 1.64e-31 114
MS.gene47046.t1 MTR_7g115650 47.619 105 54 1 10 114 11 114 1.64e-31 113
MS.gene47046.t1 MTR_3g461490 47.368 114 58 2 11 123 12 124 2.48e-31 115
MS.gene47046.t1 MTR_1g043050 49.057 106 53 1 9 114 10 114 3.36e-31 114
MS.gene47046.t1 MTR_6g006030 43.548 124 69 1 5 128 8 130 4.12e-31 112
MS.gene47046.t1 MTR_1g062940 50.962 104 50 1 11 114 6 108 7.03e-31 112
MS.gene47046.t1 MTR_0008s0470 38.415 164 90 5 10 173 12 164 8.04e-31 113
MS.gene47046.t1 MTR_3g074520 45.082 122 65 2 10 130 11 131 9.18e-31 114
MS.gene47046.t1 MTR_0140s0030 48.624 109 54 2 10 117 12 119 1.68e-30 114
MS.gene47046.t1 MTR_0489s0020 48.624 109 54 2 10 117 12 119 1.68e-30 114
MS.gene47046.t1 MTR_1g085040 47.788 113 57 2 11 122 12 123 2.02e-30 114
MS.gene47046.t1 MTR_6g012180 48.039 102 52 1 9 110 10 110 2.12e-30 113
MS.gene47046.t1 MTR_7g035075 43.478 115 64 1 5 119 8 121 2.22e-30 110
MS.gene47046.t1 MTR_3g039990 46.789 109 57 1 10 118 12 119 2.23e-30 113
MS.gene47046.t1 MTR_7g010210 45.455 110 59 1 9 118 10 118 2.68e-30 112
MS.gene47046.t1 MTR_2g064160 40.625 128 74 2 1 127 1 127 3.24e-30 112
MS.gene47046.t1 MTR_3g077110 46.774 124 59 3 11 128 12 134 3.60e-30 113
MS.gene47046.t1 MTR_7g110830 47.368 114 58 2 11 123 12 124 3.86e-30 113
MS.gene47046.t1 MTR_7g010210 45.455 110 59 1 9 118 10 118 3.94e-30 112
MS.gene47046.t1 MTR_0008s0390 46.667 105 55 1 10 114 12 115 4.65e-30 111
MS.gene47046.t1 MTR_1g017140 51.429 105 49 2 11 114 12 115 6.85e-30 112
MS.gene47046.t1 MTR_8g020490 49.020 102 51 1 9 110 6 106 7.17e-30 110
MS.gene47046.t1 MTR_0251s0050 45.714 105 56 1 10 114 12 115 7.33e-30 110
MS.gene47046.t1 MTR_7g011170 46.087 115 60 2 10 123 11 124 7.61e-30 111
MS.gene47046.t1 MTR_6g055910 47.222 108 56 1 12 119 15 121 1.05e-29 110
MS.gene47046.t1 MTR_1g112760 46.903 113 58 2 11 122 13 124 1.20e-29 109
MS.gene47046.t1 MTR_8g095390 48.718 117 54 3 7 122 12 123 1.33e-29 111
MS.gene47046.t1 MTR_2g089450 46.667 105 55 1 10 114 11 114 1.71e-29 109
MS.gene47046.t1 MTR_4g082290 42.336 137 76 3 10 145 11 145 1.73e-29 112
MS.gene47046.t1 MTR_4g065017 46.667 120 62 2 7 125 13 131 2.21e-29 110
MS.gene47046.t1 MTR_1g085640 46.491 114 59 2 11 123 12 124 2.26e-29 111
MS.gene47046.t1 MTR_1g086530 42.276 123 69 2 11 133 33 153 3.19e-29 109
MS.gene47046.t1 MTR_8g031360 48.113 106 53 2 10 114 12 116 3.81e-29 109
MS.gene47046.t1 MTR_7g096930 46.667 105 55 1 10 114 11 114 4.24e-29 108
MS.gene47046.t1 MTR_7g111290 51.515 99 47 1 11 109 12 109 4.56e-29 110
MS.gene47046.t1 MTR_5g079670 36.076 158 97 3 11 167 11 165 5.67e-29 107
MS.gene47046.t1 MTR_4g097570 52.000 100 46 2 11 109 12 110 5.74e-29 108
MS.gene47046.t1 MTR_5g014990 49.524 105 51 2 11 114 12 115 6.45e-29 109
MS.gene47046.t1 MTR_1g100667 44.444 117 64 1 4 120 6 121 7.17e-29 108
MS.gene47046.t1 MTR_3g103570 48.571 105 52 2 11 114 12 115 8.32e-29 109
MS.gene47046.t1 MTR_3g097450 47.009 117 56 3 7 122 12 123 9.84e-29 108
MS.gene47046.t1 MTR_4g073420 46.154 117 57 3 7 122 12 123 1.42e-28 107
MS.gene47046.t1 MTR_4g105130 46.018 113 59 2 11 122 12 123 1.43e-28 109
MS.gene47046.t1 MTR_4g485530 43.443 122 65 3 13 133 14 132 1.51e-28 105
MS.gene47046.t1 MTR_6g012690 44.348 115 62 2 10 123 11 124 1.51e-28 108
MS.gene47046.t1 MTR_4g121460 46.667 105 55 1 10 114 11 114 1.76e-28 108
MS.gene47046.t1 MTR_2g095520 51.485 101 47 2 11 110 12 111 2.50e-28 107
MS.gene47046.t1 MTR_1g110460 41.667 108 62 1 11 118 26 132 2.56e-28 107
MS.gene47046.t1 MTR_4g082230 41.176 136 77 3 11 145 12 145 2.85e-28 108
MS.gene47046.t1 MTR_4g029540 48.148 108 54 2 11 117 10 116 2.89e-28 107
MS.gene47046.t1 MTR_2g097910 45.299 117 60 2 11 124 20 135 2.91e-28 107
MS.gene47046.t1 MTR_0063s0090 46.535 101 53 1 10 110 11 110 3.62e-28 105
MS.gene47046.t1 MTR_4g057635 49.524 105 51 2 11 114 12 115 4.06e-28 107
MS.gene47046.t1 MTR_5g042030 46.491 114 59 2 10 122 6 118 6.15e-28 106
MS.gene47046.t1 MTR_4g100720 44.231 104 57 1 7 110 9 111 6.73e-28 103
MS.gene47046.t1 MTR_3g083540 42.982 114 63 2 10 122 40 152 7.06e-28 106
MS.gene47046.t1 MTR_4g128670 49.505 101 49 2 11 110 12 111 9.04e-28 107
MS.gene47046.t1 MTR_6g009430 44.737 114 61 2 11 123 12 124 1.04e-27 106
MS.gene47046.t1 MTR_1g073170 45.283 106 57 1 12 117 21 125 1.27e-27 104
MS.gene47046.t1 MTR_7g102110 48.571 105 52 2 11 114 12 115 1.34e-27 104
MS.gene47046.t1 MTR_8g017440 43.307 127 68 4 1 124 1 126 1.37e-27 106
MS.gene47046.t1 MTR_2g096380 46.154 104 55 1 11 114 6 108 1.41e-27 103
MS.gene47046.t1 MTR_4g063100 43.860 114 60 2 12 122 8 120 1.80e-27 103
MS.gene47046.t1 MTR_4g097570 51.485 101 46 3 11 109 12 111 2.38e-27 104
MS.gene47046.t1 MTR_6g090405 45.455 110 58 2 11 119 12 120 2.61e-27 103
MS.gene47046.t1 MTR_8g006470 46.667 105 54 2 11 114 10 113 2.79e-27 104
MS.gene47046.t1 MTR_1g045610 43.750 112 59 2 12 123 22 129 3.94e-27 103
MS.gene47046.t1 MTR_3g028740 45.794 107 57 1 11 117 22 127 4.08e-27 105
MS.gene47046.t1 MTR_8g027345 43.119 109 61 1 10 118 11 118 4.39e-27 103
MS.gene47046.t1 MTR_1g086510 41.284 109 63 1 10 118 20 127 7.37e-27 102
MS.gene47046.t1 MTR_3g065440 44.538 119 64 2 10 127 11 128 7.48e-27 103
MS.gene47046.t1 MTR_2g089420 44.860 107 58 1 8 114 8 113 7.67e-27 105
MS.gene47046.t1 MTR_5g078140 39.877 163 85 5 10 160 11 172 1.30e-26 103
MS.gene47046.t1 MTR_2g034790 36.538 156 93 3 10 164 11 161 1.31e-26 103
MS.gene47046.t1 MTR_5g010020 46.000 100 53 1 11 110 12 110 1.32e-26 103
MS.gene47046.t1 MTR_4g125520 45.098 102 55 1 9 110 10 110 1.35e-26 102
MS.gene47046.t1 MTR_8g098860 44.037 109 56 2 11 115 12 119 1.38e-26 103
MS.gene47046.t1 MTR_2g099740 43.478 115 63 2 1 114 1 114 1.90e-26 103
MS.gene47046.t1 MTR_0247s0040 44.231 104 57 1 10 113 6 108 2.30e-26 99.4
MS.gene47046.t1 MTR_8g017540 43.478 115 63 2 1 114 47 160 3.06e-26 103
MS.gene47046.t1 MTR_4g102380 44.348 115 62 2 10 123 11 124 3.62e-26 101
MS.gene47046.t1 MTR_2g067420 48.515 101 51 1 11 111 14 113 5.89e-26 101
MS.gene47046.t1 MTR_5g078910 43.396 106 59 1 9 114 5 109 5.90e-26 101
MS.gene47046.t1 MTR_5g016510 49.515 103 49 3 13 114 5 105 6.34e-26 101
MS.gene47046.t1 MTR_0193s0090 42.017 119 64 2 1 119 1 114 8.29e-26 98.6
MS.gene47046.t1 MTR_7g117730 40.952 105 61 1 10 114 11 114 9.83e-26 99.8
MS.gene47046.t1 MTR_5g078860 44.340 106 58 1 9 114 5 109 1.19e-25 100
MS.gene47046.t1 MTR_8g017500 41.129 124 70 3 1 122 1 123 1.36e-25 100
MS.gene47046.t1 MTR_5g079120 41.509 106 61 1 9 114 59 163 3.02e-25 99.4
MS.gene47046.t1 MTR_5g079290 41.121 107 62 1 8 114 14 119 3.19e-25 98.6
MS.gene47046.t1 MTR_3g101290 36.709 158 82 4 13 157 37 189 5.93e-25 97.1
MS.gene47046.t1 MTR_5g079220 41.121 107 62 1 8 114 18 123 1.00e-24 97.4
MS.gene47046.t1 MTR_8g017340 44.954 109 54 3 7 114 12 115 1.18e-24 99.8
MS.gene47046.t1 MTR_8g017390 44.037 109 55 3 7 114 12 115 1.25e-24 99.8
MS.gene47046.t1 MTR_8g060940 42.574 101 57 1 10 110 6 105 1.59e-24 96.3
MS.gene47046.t1 MTR_4g019370 44.954 109 56 3 13 120 38 143 1.83e-24 98.2
MS.gene47046.t1 MTR_3g045430 38.525 122 73 2 2 122 4 124 2.05e-24 97.1
MS.gene47046.t1 MTR_6g015455 48.454 97 48 2 13 109 5 99 2.49e-24 99.4
MS.gene47046.t1 MTR_7g109320 46.491 114 58 2 10 121 11 123 2.54e-24 97.8
MS.gene47046.t1 MTR_5g078800 42.453 106 60 1 9 114 5 109 3.12e-24 95.9
MS.gene47046.t1 MTR_5g078950 39.623 106 63 1 8 113 4 108 4.37e-24 95.5
MS.gene47046.t1 MTR_4g094982 40.714 140 74 4 13 145 5 142 4.97e-24 95.5
MS.gene47046.t1 MTR_0197s0010 36.691 139 79 2 16 154 6 135 6.23e-24 94.4
MS.gene47046.t1 MTR_5g010650 47.573 103 52 2 7 109 104 204 7.38e-24 97.4
MS.gene47046.t1 MTR_2g033170 41.667 108 62 1 11 118 24 130 9.69e-24 95.9
MS.gene47046.t1 MTR_3g077650 41.228 114 63 3 13 124 181 292 1.82e-23 96.3
MS.gene47046.t1 MTR_0001s0360 39.623 106 63 1 9 114 5 109 3.50e-23 92.8
MS.gene47046.t1 MTR_6g027340 36.364 121 75 2 13 133 16 134 1.55e-22 90.1
MS.gene47046.t1 MTR_5g078930 40.404 99 58 1 12 110 10 107 1.93e-22 90.1
MS.gene47046.t1 MTR_7g017260 41.121 107 60 2 10 114 24 129 2.20e-22 91.3
MS.gene47046.t1 MTR_8g017350 44.444 108 54 3 8 114 13 115 3.58e-22 93.2
MS.gene47046.t1 MTR_6g027360 35.714 126 79 2 8 133 73 196 5.68e-22 90.9
MS.gene47046.t1 MTR_6g055910 50.000 76 37 1 44 119 18 92 6.24e-22 89.7
MS.gene47046.t1 MTR_5g049190 41.346 104 59 2 11 114 17 118 6.67e-22 89.4
MS.gene47046.t1 MTR_5g082910 44.898 98 52 2 13 110 19 114 1.24e-21 89.4
MS.gene47046.t1 MTR_7g035350 45.545 101 53 2 13 113 225 323 1.42e-21 90.9
MS.gene47046.t1 MTR_4g105660 40.385 104 60 2 11 114 178 279 1.43e-21 90.9
MS.gene47046.t1 MTR_5g070020 39.286 112 66 2 7 118 116 225 2.22e-21 89.7
MS.gene47046.t1 MTR_4g123040 39.815 108 64 1 11 118 24 130 4.76e-21 88.2
MS.gene47046.t1 MTR_6g074860 40.000 95 55 2 16 110 7 99 1.02e-20 86.3
MS.gene47046.t1 MTR_7g037260 39.815 108 63 2 11 118 143 248 1.05e-20 87.8
MS.gene47046.t1 MTR_3g463400 41.284 109 60 3 11 118 131 236 1.09e-20 88.6
MS.gene47046.t1 MTR_7g451170 43.137 102 56 2 13 114 191 290 1.10e-20 88.2
MS.gene47046.t1 MTR_2g096380 51.389 72 34 1 43 114 19 89 1.58e-20 85.1
MS.gene47046.t1 MTR_7g061550 40.187 107 61 2 13 117 7 112 1.67e-20 87.4
MS.gene47046.t1 MTR_4g063100 46.988 83 40 2 43 122 10 91 5.10e-20 84.0
MS.gene47046.t1 MTR_1g026870 37.383 107 65 2 8 114 80 184 5.88e-20 87.0
MS.gene47046.t1 MTR_1g026870 34.286 105 68 1 5 109 25 128 4.49e-14 70.1
MS.gene47046.t1 MTR_3g110028 37.383 107 65 2 8 114 80 184 1.66e-19 85.5
MS.gene47046.t1 MTR_3g110028 35.238 105 67 1 5 109 25 128 2.60e-14 70.5
MS.gene47046.t1 MTR_4g088015 38.889 108 64 2 11 118 219 324 2.39e-19 84.7
MS.gene47046.t1 MTR_3g089045 36.667 120 71 3 2 118 5 122 4.20e-19 82.8
MS.gene47046.t1 MTR_4g082040 37.391 115 67 3 5 116 97 209 4.41e-19 84.0
MS.gene47046.t1 MTR_7g111290 52.239 67 31 1 43 109 2 67 5.56e-19 82.8
MS.gene47046.t1 MTR_7g037130 40.777 103 59 2 11 113 143 243 1.25e-18 82.0
MS.gene47046.t1 MTR_7g061330 39.252 107 63 2 8 114 108 212 1.37e-18 82.8
MS.gene47046.t1 MTR_7g061330 36.364 99 52 3 16 109 64 156 1.15e-12 65.9
MS.gene47046.t1 MTR_7g461410 39.252 107 63 2 8 114 108 212 1.37e-18 82.8
MS.gene47046.t1 MTR_7g461410 36.364 99 52 3 16 109 64 156 1.15e-12 65.9
MS.gene47046.t1 MTR_7g061330 39.252 107 63 2 8 114 72 176 1.48e-18 82.8
MS.gene47046.t1 MTR_7g061330 35.714 98 54 3 16 109 28 120 1.22e-12 65.5
MS.gene47046.t1 MTR_7g450950 37.168 113 65 3 1 113 149 255 2.65e-18 81.3
MS.gene47046.t1 MTR_5g041570 35.965 114 68 3 6 116 127 238 4.47e-18 81.3
MS.gene47046.t1 MTR_1g057980 40.777 103 59 2 11 113 78 178 5.23e-18 79.7
MS.gene47046.t1 MTR_5g007300 42.353 85 49 0 1 85 54 138 5.60e-18 76.6
MS.gene47046.t1 MTR_7g086960 37.719 114 68 3 6 118 82 193 1.59e-17 79.0
MS.gene47046.t1 MTR_8g468380 30.675 163 104 4 5 167 14 167 7.54e-17 77.8
MS.gene47046.t1 MTR_6g013135 53.425 73 29 1 96 168 148 215 3.33e-16 75.5
MS.gene47046.t1 MTR_6g027370 35.185 108 68 2 16 123 102 207 5.69e-16 74.7
MS.gene47046.t1 MTR_0023s0210 41.096 73 43 0 10 82 6 78 8.31e-15 66.6
MS.gene47046.t1 MTR_5g038910 37.383 107 55 3 16 117 29 128 1.98e-14 70.9
MS.gene47046.t1 MTR_5g038910 35.897 117 63 3 16 127 29 138 2.27e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47046.t1 AT2G26950 48.571 140 71 1 4 143 9 147 1.00e-40 141
MS.gene47046.t1 AT2G32460 46.154 130 64 2 9 133 4 132 3.49e-37 134
MS.gene47046.t1 AT2G32460 46.154 130 64 2 9 133 16 144 3.54e-37 134
MS.gene47046.t1 AT3G11440 47.619 126 65 1 6 131 36 160 8.04e-37 132
MS.gene47046.t1 AT3G11440 47.619 126 65 1 6 131 36 160 1.77e-36 133
MS.gene47046.t1 AT3G11440 47.619 126 65 1 6 131 36 160 1.77e-36 133
MS.gene47046.t1 AT3G11440 47.619 126 65 1 6 131 36 160 1.77e-36 133
MS.gene47046.t1 AT5G55020 49.573 117 58 1 11 127 26 141 8.57e-36 130
MS.gene47046.t1 AT5G06100 47.934 121 62 1 10 130 31 150 1.11e-35 129
MS.gene47046.t1 AT5G06100 47.934 121 62 1 10 130 31 150 1.96e-35 130
MS.gene47046.t1 AT5G06100 47.934 121 62 1 10 130 31 150 1.96e-35 130
MS.gene47046.t1 AT5G06100 47.934 121 62 1 10 130 31 150 1.96e-35 130
MS.gene47046.t1 AT5G06100 47.934 121 62 1 10 130 31 150 1.96e-35 130
MS.gene47046.t1 AT2G26960 47.059 119 62 1 9 127 18 135 3.81e-35 127
MS.gene47046.t1 AT4G26930 48.246 114 58 1 11 124 19 131 7.11e-35 126
MS.gene47046.t1 AT4G21440 51.639 122 57 2 10 130 11 131 1.10e-34 125
MS.gene47046.t1 AT4G01680 43.165 139 77 2 11 148 12 149 3.85e-33 118
MS.gene47046.t1 AT4G01680 43.478 138 76 2 11 147 12 148 5.51e-32 117
MS.gene47046.t1 AT4G05100 50.877 114 54 2 10 122 12 124 8.08e-32 117
MS.gene47046.t1 AT5G65230 46.154 130 68 2 3 131 4 132 8.69e-32 116
MS.gene47046.t1 AT3G61250 47.368 114 58 2 10 122 11 123 9.32e-32 116
MS.gene47046.t1 AT1G57560 42.038 157 87 3 11 164 12 167 1.48e-31 116
MS.gene47046.t1 AT5G10280 47.863 117 59 2 8 123 9 124 2.47e-31 116
MS.gene47046.t1 AT1G08810 48.571 105 53 1 10 114 11 114 3.00e-31 114
MS.gene47046.t1 AT5G26660 45.161 124 66 2 11 133 12 134 3.76e-31 115
MS.gene47046.t1 AT4G28110 49.565 115 56 2 10 123 11 124 3.91e-31 114
MS.gene47046.t1 AT1G57560 38.323 167 100 3 11 175 12 177 4.14e-31 114
MS.gene47046.t1 AT5G54230 47.368 114 58 2 11 123 12 124 4.51e-31 115
MS.gene47046.t1 AT3G01530 37.222 180 104 3 11 183 25 202 6.49e-31 112
MS.gene47046.t1 AT5G40330 36.875 160 93 3 12 166 13 169 6.85e-31 112
MS.gene47046.t1 AT4G38620 41.216 148 81 3 7 153 12 154 7.32e-31 113
MS.gene47046.t1 AT5G56110 44.828 116 62 2 11 125 12 126 7.79e-31 114
MS.gene47046.t1 AT1G74080 44.715 123 66 2 9 130 10 131 1.33e-30 114
MS.gene47046.t1 AT3G23250 46.667 105 55 1 10 114 11 114 2.72e-30 112
MS.gene47046.t1 AT4G37780 49.057 106 52 2 10 114 11 115 3.09e-30 112
MS.gene47046.t1 AT3G47600 45.872 109 58 1 10 118 11 118 3.35e-30 113
MS.gene47046.t1 AT5G14750 46.729 107 56 1 8 114 13 118 5.16e-30 109
MS.gene47046.t1 AT1G09540 48.673 113 56 2 11 122 12 123 5.22e-30 113
MS.gene47046.t1 AT1G74650 47.115 104 54 1 11 114 12 114 5.67e-30 112
MS.gene47046.t1 AT5G16770 48.571 105 53 1 10 114 11 114 5.71e-30 112
MS.gene47046.t1 AT5G16770 48.571 105 53 1 10 114 11 114 5.71e-30 112
MS.gene47046.t1 AT3G28910 47.619 105 54 1 10 114 11 114 6.06e-30 112
MS.gene47046.t1 AT1G18710 40.171 117 68 2 10 125 11 126 6.35e-30 110
MS.gene47046.t1 AT5G52600 37.107 159 82 5 11 152 12 169 9.45e-30 108
MS.gene47046.t1 AT5G62470 45.872 109 58 1 10 118 11 118 9.60e-30 112
MS.gene47046.t1 AT3G12720 44.068 118 64 2 11 127 22 138 1.07e-29 111
MS.gene47046.t1 AT5G16770 48.571 105 53 1 10 114 11 114 1.08e-29 111
MS.gene47046.t1 AT5G16770 48.571 105 53 1 10 114 11 114 1.08e-29 111
MS.gene47046.t1 AT5G59780 47.368 114 56 2 12 122 9 121 1.16e-29 109
MS.gene47046.t1 AT3G01140 42.424 132 72 3 10 140 54 182 1.18e-29 112
MS.gene47046.t1 AT3G27920 37.037 162 96 2 8 164 11 171 1.35e-29 108
MS.gene47046.t1 AT3G01140 42.424 132 72 3 10 140 11 139 1.36e-29 111
MS.gene47046.t1 AT5G15310 45.217 115 61 2 10 123 11 124 1.54e-29 109
MS.gene47046.t1 AT3G27810 45.370 108 58 1 11 118 20 126 1.63e-29 108
MS.gene47046.t1 AT1G22640 38.650 163 96 3 11 172 12 171 1.71e-29 109
MS.gene47046.t1 AT3G30210 46.296 108 57 1 10 117 26 132 1.99e-29 109
MS.gene47046.t1 AT1G74430 41.026 117 67 2 10 125 11 126 2.00e-29 109
MS.gene47046.t1 AT3G46130 46.154 117 59 2 9 122 7 122 2.56e-29 108
MS.gene47046.t1 AT1G18570 45.217 115 61 2 10 123 12 125 2.72e-29 110
MS.gene47046.t1 AT3G49690 51.429 105 49 2 11 114 12 115 2.75e-29 110
MS.gene47046.t1 AT3G02940 48.571 105 53 1 10 114 11 114 2.93e-29 110
MS.gene47046.t1 AT4G17785 46.903 113 59 1 2 114 4 115 3.04e-29 110
MS.gene47046.t1 AT3G12820 48.077 104 53 1 11 114 14 116 3.06e-29 108
MS.gene47046.t1 AT4G17785 46.903 113 59 1 2 114 4 115 3.07e-29 110
MS.gene47046.t1 AT1G06180 46.847 111 56 2 10 118 11 120 3.42e-29 108
MS.gene47046.t1 AT1G16490 43.357 143 74 4 11 153 14 149 3.69e-29 108
MS.gene47046.t1 AT5G15310 45.217 115 61 2 10 123 11 124 3.83e-29 110
MS.gene47046.t1 AT5G15310 45.217 115 61 2 10 123 11 124 3.92e-29 110
MS.gene47046.t1 AT1G56160 47.321 112 54 2 11 122 14 120 4.04e-29 109
MS.gene47046.t1 AT5G61420 39.869 153 80 4 9 150 10 161 5.03e-29 110
MS.gene47046.t1 AT3G02940 48.571 105 53 1 10 114 11 114 5.03e-29 109
MS.gene47046.t1 AT3G02940 48.571 105 53 1 10 114 11 114 5.03e-29 109
MS.gene47046.t1 AT3G13540 41.803 122 69 2 2 122 14 134 5.54e-29 108
MS.gene47046.t1 AT2G31180 36.872 179 83 5 10 164 11 183 6.64e-29 107
MS.gene47046.t1 AT1G35515 46.903 113 58 2 11 122 12 123 6.74e-29 107
MS.gene47046.t1 AT5G40350 44.762 105 57 1 11 115 17 120 7.00e-29 107
MS.gene47046.t1 AT3G08500 46.729 107 56 1 11 117 30 135 8.36e-29 109
MS.gene47046.t1 AT3G53200 48.598 107 54 1 11 117 9 114 8.68e-29 107
MS.gene47046.t1 AT1G34670 46.957 115 59 2 10 123 11 124 1.22e-28 109
MS.gene47046.t1 AT4G01680 40.000 150 76 3 11 147 12 160 1.36e-28 108
MS.gene47046.t1 AT5G07690 47.170 106 55 1 9 114 10 114 1.39e-28 108
MS.gene47046.t1 AT4G13480 46.154 117 58 2 12 128 7 118 1.80e-28 107
MS.gene47046.t1 AT4G34990 45.299 117 58 3 7 122 12 123 1.82e-28 107
MS.gene47046.t1 AT5G62470 45.872 109 57 2 10 118 11 117 2.27e-28 108
MS.gene47046.t1 AT5G12870 46.364 110 58 1 9 118 16 124 2.33e-28 107
MS.gene47046.t1 AT2G36890 43.590 117 64 2 11 126 12 127 4.59e-28 106
MS.gene47046.t1 AT5G07700 46.226 106 56 1 9 114 10 114 4.65e-28 107
MS.gene47046.t1 AT5G07700 46.226 106 56 1 9 114 10 114 4.65e-28 107
MS.gene47046.t1 AT5G65790 50.476 105 50 2 11 114 12 115 4.78e-28 108
MS.gene47046.t1 AT1G79180 41.007 139 77 3 11 145 14 151 4.89e-28 106
MS.gene47046.t1 AT3G60460 42.609 115 64 2 1 114 1 114 9.22e-28 105
MS.gene47046.t1 AT2G36890 43.590 117 64 2 11 126 53 168 9.29e-28 106
MS.gene47046.t1 AT1G48000 42.056 107 61 1 11 117 32 137 9.98e-28 104
MS.gene47046.t1 AT2G16720 44.248 113 61 2 11 122 12 123 1.30e-27 105
MS.gene47046.t1 AT4G09460 45.299 117 58 3 7 122 12 123 1.60e-27 103
MS.gene47046.t1 AT5G57620 48.571 105 52 2 11 114 12 115 2.03e-27 105
MS.gene47046.t1 AT3G24310 44.037 109 60 1 9 117 16 123 3.36e-27 103
MS.gene47046.t1 AT3G28470 47.000 100 52 1 11 110 12 110 3.41e-27 104
MS.gene47046.t1 AT2G47190 42.991 107 60 1 11 117 20 125 3.45e-27 103
MS.gene47046.t1 AT5G60890 43.636 110 61 1 9 118 10 118 3.83e-27 104
MS.gene47046.t1 AT3G13890 44.231 104 57 1 11 114 12 114 4.86e-27 105
MS.gene47046.t1 AT5G23000 48.571 105 52 2 11 114 12 115 5.19e-27 104
MS.gene47046.t1 AT5G16600 46.087 115 60 2 10 123 11 124 6.14e-27 104
MS.gene47046.t1 AT1G66230 46.087 115 60 2 10 123 11 124 9.12e-27 102
MS.gene47046.t1 AT1G68320 40.741 108 63 1 11 118 19 125 1.66e-26 102
MS.gene47046.t1 AT1G63910 46.154 104 55 1 11 114 12 114 2.12e-26 103
MS.gene47046.t1 AT1G25340 41.121 107 62 1 12 118 19 124 2.13e-26 102
MS.gene47046.t1 AT1G66370 43.243 111 61 2 9 118 6 115 2.39e-26 101
MS.gene47046.t1 AT3G62610 44.118 102 56 1 10 111 11 111 3.36e-26 102
MS.gene47046.t1 AT3G48920 45.631 103 55 1 12 114 19 120 3.79e-26 100
MS.gene47046.t1 AT2G47460 45.098 102 55 1 10 111 11 111 5.10e-26 102
MS.gene47046.t1 AT5G14340 42.982 114 63 2 10 122 23 135 5.33e-26 100
MS.gene47046.t1 AT5G35550 44.231 104 57 1 11 114 14 116 5.62e-26 100
MS.gene47046.t1 AT3G50060 45.872 109 57 2 13 121 6 112 8.51e-26 100
MS.gene47046.t1 AT1G56650 38.519 135 73 3 4 129 1 134 9.15e-26 99.8
MS.gene47046.t1 AT5G62320 44.628 121 58 3 10 122 12 131 1.02e-25 99.4
MS.gene47046.t1 AT5G49330 41.739 115 62 2 10 124 11 120 1.63e-25 100
MS.gene47046.t1 AT4G22680 45.217 115 61 2 10 123 11 124 2.16e-25 99.0
MS.gene47046.t1 AT1G66380 42.982 114 63 2 4 116 1 113 3.57e-25 95.1
MS.gene47046.t1 AT5G52260 46.602 103 54 1 12 114 13 114 1.55e-24 96.7
MS.gene47046.t1 AT4G25560 43.689 103 57 1 12 114 11 112 1.86e-24 97.1
MS.gene47046.t1 AT1G66390 42.105 114 64 2 4 116 1 113 2.95e-24 95.5
MS.gene47046.t1 AT3G13890 40.323 124 63 3 1 114 1 123 3.75e-24 97.4
MS.gene47046.t1 AT4G18770 37.226 137 82 3 11 145 215 349 6.12e-24 97.4
MS.gene47046.t1 AT5G67300 36.196 163 94 5 13 167 6 166 7.68e-24 95.9
MS.gene47046.t1 AT2G23290 47.573 103 51 3 13 114 13 113 9.83e-24 95.5
MS.gene47046.t1 AT4G37260 46.364 110 56 3 13 121 13 120 1.07e-23 95.5
MS.gene47046.t1 AT5G40360 34.568 162 95 4 11 163 156 315 1.49e-23 95.9
MS.gene47046.t1 AT3G27785 40.741 108 62 2 11 118 187 292 1.87e-23 96.3
MS.gene47046.t1 AT3G06490 43.519 108 60 1 11 118 19 125 2.85e-23 94.4
MS.gene47046.t1 AT1G25340 39.252 107 59 2 12 118 19 119 4.42e-23 93.2
MS.gene47046.t1 AT1G25340 39.252 107 59 2 12 118 19 119 6.94e-23 93.2
MS.gene47046.t1 AT4G12350 44.231 104 57 1 11 114 12 114 1.28e-22 92.0
MS.gene47046.t1 AT1G79180 33.721 172 76 4 11 145 14 184 1.56e-22 92.4
MS.gene47046.t1 AT2G39880 43.363 113 62 2 2 114 39 149 2.03e-22 92.8
MS.gene47046.t1 AT5G49620 40.741 108 63 1 11 118 26 132 4.77e-22 90.9
MS.gene47046.t1 AT3G53200 55.405 74 32 1 44 117 9 81 6.63e-22 88.6
MS.gene47046.t1 AT5G26660 42.268 97 54 2 38 133 8 103 1.04e-21 90.1
MS.gene47046.t1 AT4G32730 41.121 107 61 2 8 114 82 186 3.22e-21 90.5
MS.gene47046.t1 AT4G32730 36.190 105 66 1 5 109 27 130 3.33e-15 73.2
MS.gene47046.t1 AT3G46130 50.000 84 38 2 42 122 8 90 3.46e-21 87.0
MS.gene47046.t1 AT4G32730 41.121 107 61 2 8 114 82 186 3.48e-21 90.5
MS.gene47046.t1 AT4G32730 36.190 105 66 1 5 109 27 130 4.39e-15 72.8
MS.gene47046.t1 AT4G32730 41.121 107 61 2 8 114 82 186 3.48e-21 90.5
MS.gene47046.t1 AT4G32730 36.190 105 66 1 5 109 27 130 4.39e-15 72.8
MS.gene47046.t1 AT4G32730 41.121 107 61 2 8 114 82 186 3.48e-21 90.5
MS.gene47046.t1 AT4G32730 36.190 105 66 1 5 109 27 130 4.39e-15 72.8
MS.gene47046.t1 AT4G32730 41.121 107 61 2 8 114 82 186 3.48e-21 90.5
MS.gene47046.t1 AT4G32730 36.190 105 66 1 5 109 27 130 4.39e-15 72.8
MS.gene47046.t1 AT5G17800 36.620 142 84 4 1 138 80 219 3.76e-21 88.6
MS.gene47046.t1 AT5G58850 44.037 109 57 3 7 114 99 204 4.42e-21 89.7
MS.gene47046.t1 AT3G55730 43.137 102 56 2 13 114 56 155 5.96e-21 89.0
MS.gene47046.t1 AT5G59780 50.602 83 37 2 43 122 19 100 8.01e-21 85.9
MS.gene47046.t1 AT3G46130 50.602 83 37 2 43 122 19 100 1.44e-20 85.9
MS.gene47046.t1 AT5G40350 48.649 74 37 1 42 115 3 75 2.65e-20 83.6
MS.gene47046.t1 AT3G27810 49.333 75 37 1 44 118 4 77 2.66e-20 83.6
MS.gene47046.t1 AT1G17950 38.532 109 63 3 16 122 8 114 3.02e-20 85.1
MS.gene47046.t1 AT3G09230 40.196 102 59 2 13 114 55 154 5.45e-20 86.3
MS.gene47046.t1 AT2G37630 42.056 107 59 2 13 117 4 109 5.72e-20 85.9
MS.gene47046.t1 AT5G02320 39.252 107 63 2 8 114 62 166 5.90e-20 86.7
MS.gene47046.t1 AT5G02320 37.234 94 58 1 16 109 18 110 1.57e-14 71.2
MS.gene47046.t1 AT5G02320 39.252 107 63 2 8 114 122 226 5.95e-20 86.7
MS.gene47046.t1 AT5G02320 36.735 98 53 2 16 109 78 170 1.80e-14 70.9
MS.gene47046.t1 AT5G02320 39.252 107 63 2 8 114 122 226 5.95e-20 86.7
MS.gene47046.t1 AT5G02320 36.735 98 53 2 16 109 78 170 1.80e-14 70.9
MS.gene47046.t1 AT5G49620 36.364 121 64 1 11 118 26 146 7.39e-20 85.1
MS.gene47046.t1 AT3G12820 54.545 66 29 1 49 114 4 68 9.89e-20 82.4
MS.gene47046.t1 AT2G25230 40.152 132 69 5 4 127 12 141 1.31e-19 83.2
MS.gene47046.t1 AT4G00540 37.795 127 70 4 4 127 94 214 1.83e-19 85.1
MS.gene47046.t1 AT4G00540 32.743 113 69 2 4 109 37 149 9.37e-12 62.8
MS.gene47046.t1 AT4G33450 36.449 107 63 3 11 114 17 121 2.20e-19 82.8
MS.gene47046.t1 AT4G00540 37.795 127 70 4 4 127 92 212 2.21e-19 84.7
MS.gene47046.t1 AT4G00540 32.743 113 69 2 4 109 35 147 1.03e-11 62.8
MS.gene47046.t1 AT5G11510 36.449 107 66 2 8 114 76 180 3.43e-19 84.7
MS.gene47046.t1 AT5G11510 35.780 109 61 2 5 109 21 124 1.49e-14 71.2
MS.gene47046.t1 AT5G11510 36.449 107 66 2 8 114 76 180 3.57e-19 84.7
MS.gene47046.t1 AT5G11510 35.780 109 61 2 5 109 21 124 1.52e-14 71.2
MS.gene47046.t1 AT5G11510 36.449 107 66 2 8 114 76 180 3.57e-19 84.7
MS.gene47046.t1 AT5G11510 35.780 109 61 2 5 109 21 124 1.52e-14 71.2
MS.gene47046.t1 AT5G11510 36.449 107 66 2 8 114 76 180 3.57e-19 84.7
MS.gene47046.t1 AT5G11510 35.780 109 61 2 5 109 21 124 1.52e-14 71.2
MS.gene47046.t1 AT5G11510 36.449 107 66 2 8 114 76 180 3.58e-19 84.7
MS.gene47046.t1 AT5G11510 35.780 109 61 2 5 109 21 124 1.55e-14 71.2
MS.gene47046.t1 AT5G11050 41.667 108 59 3 9 115 101 205 3.63e-19 84.3
MS.gene47046.t1 AT3G09370 39.252 107 63 2 8 114 130 234 6.76e-19 83.6
MS.gene47046.t1 AT3G09370 36.082 97 55 2 16 109 86 178 7.69e-13 66.2
MS.gene47046.t1 AT3G09370 39.252 107 63 2 8 114 138 242 7.17e-19 83.6
MS.gene47046.t1 AT3G09370 35.106 94 60 1 16 109 94 186 7.58e-13 66.2
MS.gene47046.t1 AT3G09370 31.016 187 110 6 8 182 125 304 7.19e-19 83.6
MS.gene47046.t1 AT3G09370 36.082 97 55 2 16 109 81 173 8.05e-13 66.2
MS.gene47046.t1 AT1G69560 35.238 105 66 2 6 110 116 218 1.02e-18 82.4
MS.gene47046.t1 AT1G69560 35.238 105 66 2 6 110 100 202 1.03e-18 82.0
MS.gene47046.t1 AT1G73410 41.071 112 58 4 16 122 9 117 1.13e-18 80.1
MS.gene47046.t1 AT1G73410 41.071 112 58 4 16 122 9 117 1.21e-18 80.9
MS.gene47046.t1 AT1G26780 38.000 100 60 2 11 110 96 193 1.65e-18 80.9
MS.gene47046.t1 AT1G26780 39.450 109 60 4 11 115 96 202 2.92e-18 81.3
MS.gene47046.t1 AT5G14750 43.210 81 40 2 39 114 5 84 5.68e-18 77.4
MS.gene47046.t1 AT5G35550 50.704 71 34 1 44 114 50 119 1.46e-17 78.2
MS.gene47046.t1 AT3G47600 37.500 112 55 3 44 155 39 135 2.07e-17 78.6
MS.gene47046.t1 AT3G29020 34.211 114 70 3 6 116 58 169 6.40e-17 75.9
MS.gene47046.t1 AT3G29020 37.500 104 60 3 16 116 70 171 1.62e-16 75.9
MS.gene47046.t1 AT5G40430 39.815 108 54 5 11 114 52 152 2.28e-16 74.7
MS.gene47046.t1 AT1G66380 41.429 70 41 0 4 73 1 70 7.82e-15 67.4
MS.gene47046.t1 AT1G66380 46.667 75 38 2 43 116 7 80 3.82e-14 65.5
MS.gene47046.t1 AT1G14350 36.697 109 54 4 16 116 28 129 4.58e-14 69.7
MS.gene47046.t1 AT1G14350 36.697 109 54 4 16 116 28 129 4.58e-14 69.7
MS.gene47046.t1 AT2G02820 35.577 104 62 3 16 116 33 134 1.27e-13 68.6
MS.gene47046.t1 AT2G02820 35.577 104 62 3 16 116 33 134 1.42e-13 68.2
MS.gene47046.t1 AT2G02820 35.577 104 62 3 16 116 33 134 1.46e-13 67.8
MS.gene47046.t1 AT1G22640 48.485 66 32 2 58 122 2 66 1.23e-12 63.9
MS.gene47046.t1 AT5G39700 37.374 99 52 3 16 110 59 151 2.76e-12 62.8
MS.gene47046.t1 AT3G23250 47.368 57 29 1 58 114 2 57 9.06e-12 62.0
MS.gene47046.t1 AT5G14750 45.614 57 30 1 58 114 2 57 9.44e-12 60.1
MS.gene47046.t1 AT5G14750 45.614 57 30 1 58 114 2 57 9.44e-12 60.1
MS.gene47046.t1 AT3G18100 37.838 111 53 5 3 108 492 591 1.02e-11 63.2
MS.gene47046.t1 AT3G18100 33.663 101 65 2 8 108 442 540 2.31e-11 62.0
MS.gene47046.t1 AT3G18100 37.838 111 53 5 3 108 327 426 1.04e-11 63.2
MS.gene47046.t1 AT3G18100 33.663 101 65 2 8 108 277 375 3.08e-11 61.6
MS.gene47046.t1 AT3G18100 37.838 111 53 5 3 108 379 478 1.06e-11 63.2
MS.gene47046.t1 AT3G18100 33.663 101 65 2 8 108 329 427 2.99e-11 61.6
MS.gene47046.t1 AT3G18100 37.838 111 53 5 3 108 540 639 1.12e-11 63.2
MS.gene47046.t1 AT3G18100 33.663 101 65 2 8 108 490 588 2.51e-11 62.0

Find 37 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATACCTCGTCCCAATTTC+TGG 0.140194 5.1:-69912318 None:intergenic
TCAAATATGTTCTACAATAA+TGG 0.211901 5.1:+69913023 MS.gene47046:CDS
TCATTATCGGGCACTAATAA+AGG 0.254906 5.1:+69912227 MS.gene47046:CDS
CAAATATGTTCTACAATAAT+GGG 0.260074 5.1:+69913024 MS.gene47046:CDS
TCATCCAGTTCCATGTTGTT+AGG 0.283723 5.1:-69912903 None:intergenic
ATAATGACATCAAGAACTTT+TGG 0.308735 5.1:+69912835 MS.gene47046:CDS
CTTGAGAATCCTCAACTTGT+TGG 0.319214 5.1:-69912950 None:intergenic
CATCATCATGTCTTCATTAT+CGG 0.358301 5.1:+69912214 None:intergenic
ATGTCATTATCGCTTCTTCC+AGG 0.361507 5.1:-69912822 None:intergenic
TTTCAGTTACGTAAGAAGTT+TGG 0.376528 5.1:+69912452 MS.gene47046:CDS
CATTATCGGGCACTAATAAA+GGG 0.414737 5.1:+69912228 MS.gene47046:CDS
CTTCCCTAACAACATGGAAC+TGG 0.436652 5.1:+69912899 MS.gene47046:CDS
ATCATCATGTCTTCATTATC+GGG 0.444255 5.1:+69912215 None:intergenic
CATCCAGTTCCATGTTGTTA+GGG 0.446519 5.1:-69912902 None:intergenic
TGAAATATTAAAAGCATATG+TGG 0.459693 5.1:+69912283 MS.gene47046:CDS
ATCCTCAACTTGTTGGCCAC+TGG 0.467365 5.1:-69912943 None:intergenic
AACACGGGACTTGCACACTT+TGG 0.468274 5.1:+69912344 MS.gene47046:CDS
AGAAGTTTGGTGGATTCAAA+TGG 0.482331 5.1:+69912465 MS.gene47046:CDS
GGTTATTATACCATCTAAAA+CGG 0.488437 5.1:-69912376 None:intergenic
CAGTTACGTAAGAAGTTTGG+TGG 0.495477 5.1:+69912455 MS.gene47046:CDS
AAAACATGGAACCAGAAATT+GGG 0.497571 5.1:+69912307 MS.gene47046:CDS
CAGTTCCATGTTGTTAGGGA+AGG 0.499210 5.1:-69912898 None:intergenic
TTCCAGTGGCCAACAAGTTG+AGG 0.536535 5.1:+69912941 MS.gene47046:CDS
AGAAAAGTGGTCAAAAGAAG+AGG 0.545435 5.1:+69912259 MS.gene47046:CDS
AGTTCCATGTTGTTAGGGAA+GGG 0.571026 5.1:-69912897 None:intergenic
ATGGTCTAAAATCGCTCGCG+AGG 0.609431 5.1:+69912484 MS.gene47046:CDS
GTCACCCTTCCCTAACAACA+TGG 0.618204 5.1:+69912893 MS.gene47046:CDS
GAGTTGAATGGTGGTTCCAG+TGG 0.640978 5.1:+69912927 MS.gene47046:CDS
AAATATGTTCTACAATAATG+GGG 0.646582 5.1:+69913025 MS.gene47046:CDS
TGGTATAATAACCTACAACC+TGG 0.657649 5.1:+69912386 MS.gene47046:CDS
GGACGAGGTATCAAAGAACA+CGG 0.659332 5.1:+69912328 MS.gene47046:CDS
TCACCTATCAATCAATCTCG+AGG 0.669294 5.1:-69913074 None:intergenic
AAGAGAAAACATGAAAAGCG+TGG 0.670550 5.1:+69912867 MS.gene47046:CDS
CTGGATGATGAGTTGAATGG+TGG 0.697247 5.1:+69912918 MS.gene47046:CDS
GAACTGGATGATGAGTTGAA+TGG 0.699837 5.1:+69912915 MS.gene47046:CDS
TGGAACCAGAAATTGGGACG+AGG 0.701870 5.1:+69912313 MS.gene47046:CDS
GACGAGGTATCAAAGAACAC+GGG 0.719618 5.1:+69912329 MS.gene47046:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTATGATGATATATTAA+AGG + chr5.1:69912632-69912651 MS.gene47046:intron 15.0%
!! AAATATGTTCTACAATAATG+GGG + chr5.1:69913025-69913044 MS.gene47046:CDS 20.0%
!! CAAATATGTTCTACAATAAT+GGG + chr5.1:69913024-69913043 MS.gene47046:CDS 20.0%
!! TCAAATATGTTCTACAATAA+TGG + chr5.1:69913023-69913042 MS.gene47046:CDS 20.0%
!!! TCTTTTTTTCTTGAAAGAAT+TGG + chr5.1:69912534-69912553 MS.gene47046:intron 20.0%
!!! TGAAATATTAAAAGCATATG+TGG + chr5.1:69912283-69912302 MS.gene47046:CDS 20.0%
!!! TTTTCTTCTTCTTTACTAAA+TGG - chr5.1:69912425-69912444 None:intergenic 20.0%
! ATCTCTACTAAACAACTTAT+AGG - chr5.1:69912681-69912700 None:intergenic 25.0%
! ATGATGATATATTAAAGGCA+GGG + chr5.1:69912637-69912656 MS.gene47046:intron 25.0%
! GGTTATTATACCATCTAAAA+CGG - chr5.1:69912379-69912398 None:intergenic 25.0%
! TATGATGATATATTAAAGGC+AGG + chr5.1:69912636-69912655 MS.gene47046:intron 25.0%
!! ATAATGACATCAAGAACTTT+TGG + chr5.1:69912835-69912854 MS.gene47046:CDS 25.0%
!! TTAATCAACGTGTAACTTTT+TGG - chr5.1:69912604-69912623 None:intergenic 25.0%
!!! AAATCTAGCTTTACGTATTT+TGG + chr5.1:69912748-69912767 MS.gene47046:intron 25.0%
!!! ATTTTGATGTCTCAAATAAG+CGG + chr5.1:69912979-69912998 MS.gene47046:CDS 25.0%
!!! CTTTACGTATTTTGGTATTA+TGG + chr5.1:69912756-69912775 MS.gene47046:intron 25.0%
!!! TTTTAAGTTGCATGTGTATA+TGG + chr5.1:69912708-69912727 MS.gene47046:intron 25.0%
AAAAACATGGAACCAGAAAT+TGG + chr5.1:69912306-69912325 MS.gene47046:CDS 30.0%
AAAACATGGAACCAGAAATT+GGG + chr5.1:69912307-69912326 MS.gene47046:CDS 30.0%
AAAGCATATGTGGAAAAACA+TGG + chr5.1:69912293-69912312 MS.gene47046:CDS 30.0%
AAGGGTTGAAAAAAGAAAAG+TGG + chr5.1:69912246-69912265 MS.gene47046:CDS 30.0%
TACTAAACAACTTATAGGCA+TGG - chr5.1:69912676-69912695 None:intergenic 30.0%
TTTCAGTTACGTAAGAAGTT+TGG + chr5.1:69912452-69912471 MS.gene47046:CDS 30.0%
! AAATAAGCGGTTTTCAAAGT+TGG + chr5.1:69912992-69913011 MS.gene47046:CDS 30.0%
AAGAGAAAACATGAAAAGCG+TGG + chr5.1:69912867-69912886 MS.gene47046:CDS 35.0%
AGAAAAGTGGTCAAAAGAAG+AGG + chr5.1:69912259-69912278 MS.gene47046:CDS 35.0%
CATTATCGGGCACTAATAAA+GGG + chr5.1:69912228-69912247 MS.gene47046:CDS 35.0%
CTACAACCTGGTGTAAAAAA+GGG + chr5.1:69912398-69912417 MS.gene47046:CDS 35.0%
TCATTATCGGGCACTAATAA+AGG + chr5.1:69912227-69912246 MS.gene47046:CDS 35.0%
TGGTATAATAACCTACAACC+TGG + chr5.1:69912386-69912405 MS.gene47046:CDS 35.0%
!! AGAAGTTTGGTGGATTCAAA+TGG + chr5.1:69912465-69912484 MS.gene47046:CDS 35.0%
!!! TTATTTTTGTGACAGTTGCC+TGG + chr5.1:69912804-69912823 MS.gene47046:intron 35.0%
AGTTCCATGTTGTTAGGGAA+GGG - chr5.1:69912900-69912919 None:intergenic 40.0%
ATGTCATTATCGCTTCTTCC+AGG - chr5.1:69912825-69912844 None:intergenic 40.0%
CAGTTACGTAAGAAGTTTGG+TGG + chr5.1:69912455-69912474 MS.gene47046:CDS 40.0%
CATCCAGTTCCATGTTGTTA+GGG - chr5.1:69912905-69912924 None:intergenic 40.0%
CCTACAACCTGGTGTAAAAA+AGG + chr5.1:69912397-69912416 MS.gene47046:CDS 40.0%
CTTGAGAATCCTCAACTTGT+TGG - chr5.1:69912953-69912972 None:intergenic 40.0%
TCATCCAGTTCCATGTTGTT+AGG - chr5.1:69912906-69912925 None:intergenic 40.0%
! GAACTGGATGATGAGTTGAA+TGG + chr5.1:69912915-69912934 MS.gene47046:CDS 40.0%
!!! AATGGACCCTTTTTTACACC+AGG - chr5.1:69912407-69912426 None:intergenic 40.0%
!!! CCTTTTTTACACCAGGTTGT+AGG - chr5.1:69912400-69912419 None:intergenic 40.0%
!!! GAAGAAGTTGCCGTTTTAGA+TGG + chr5.1:69912366-69912385 MS.gene47046:CDS 40.0%
CAGTTCCATGTTGTTAGGGA+AGG - chr5.1:69912901-69912920 None:intergenic 45.0%
CTTCCCTAACAACATGGAAC+TGG + chr5.1:69912899-69912918 MS.gene47046:CDS 45.0%
TGATACCTCGTCCCAATTTC+TGG - chr5.1:69912321-69912340 None:intergenic 45.0%
! CTGGATGATGAGTTGAATGG+TGG + chr5.1:69912918-69912937 MS.gene47046:CDS 45.0%
! GACGAGGTATCAAAGAACAC+GGG + chr5.1:69912329-69912348 MS.gene47046:CDS 45.0%
! GGACGAGGTATCAAAGAACA+CGG + chr5.1:69912328-69912347 MS.gene47046:CDS 45.0%
AACACGGGACTTGCACACTT+TGG + chr5.1:69912344-69912363 MS.gene47046:CDS 50.0%
GAGTTGAATGGTGGTTCCAG+TGG + chr5.1:69912927-69912946 MS.gene47046:CDS 50.0%
GTCACCCTTCCCTAACAACA+TGG + chr5.1:69912893-69912912 MS.gene47046:CDS 50.0%
TGGAACCAGAAATTGGGACG+AGG + chr5.1:69912313-69912332 MS.gene47046:CDS 50.0%
TTCCAGTGGCCAACAAGTTG+AGG + chr5.1:69912941-69912960 MS.gene47046:CDS 50.0%
! ATGGTCTAAAATCGCTCGCG+AGG + chr5.1:69912484-69912503 MS.gene47046:CDS 50.0%
!! ATCCTCAACTTGTTGGCCAC+TGG - chr5.1:69912946-69912965 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 69912221 69913085 69912221 ID=MS.gene47046
chr5.1 mRNA 69912221 69913085 69912221 ID=MS.gene47046.t1;Parent=MS.gene47046
chr5.1 exon 69912221 69912505 69912221 ID=MS.gene47046.t1.exon1;Parent=MS.gene47046.t1
chr5.1 CDS 69912221 69912505 69912221 ID=cds.MS.gene47046.t1;Parent=MS.gene47046.t1
chr5.1 exon 69912819 69913085 69912819 ID=MS.gene47046.t1.exon2;Parent=MS.gene47046.t1
chr5.1 CDS 69912819 69913085 69912819 ID=cds.MS.gene47046.t1;Parent=MS.gene47046.t1
Gene Sequence

>MS.gene47046

ATGTCTTCATTATCGGGCACTAATAAAGGGTTGAAAAAAGAAAAGTGGTCAAAAGAAGAGGATGAAATATTAAAAGCATATGTGGAAAAACATGGAACCAGAAATTGGGACGAGGTATCAAAGAACACGGGACTTGCACACTTTGGAAGAAGTTGCCGTTTTAGATGGTATAATAACCTACAACCTGGTGTAAAAAAGGGTCCATTTAGTAAAGAAGAAGAAAATAAAGTCTTTCAGTTACGTAAGAAGTTTGGTGGATTCAAATGGTCTAAAATCGCTCGCGAGGTATTTTTTTTTTCAATTGATATATTTATCTTTTTTTCTTGAAAGAATTGGAAATTTTTATCTATCTTTTATCGAAGTATGATGTTATCTTTTAACCAAAAAGTTACACGTTGATTAAAAAAAAAAAAACTATGATGATATATTAAAGGCAGGGAGTTTATCAATTACCATGCCTATAAGTTGTTTAGTAGAGATTGTTAGTTTTTAAGTTGCATGTGTATATGGTTGAGAGAGTTTCTGAAAAATCTAGCTTTACGTATTTTGGTATTATGGTGATCATGTCATTAATTTGCATTCGTTATTTTTGTGACAGTTGCCTGGAAGAAGCGATAATGACATCAAGAACTTTTGGAATGCGAGAAAGAGAAAACATGAAAAGCGTGGCTTGTCACCCTTCCCTAACAACATGGAACTGGATGATGAGTTGAATGGTGGTTCCAGTGGCCAACAAGTTGAGGATTCTCAAGAAAATAATTTTGATGTCTCAAATAAGCGGTTTTCAAAGTTGGTTGATGATTCAAATATGTTCTACAATAATGGGGAAGTACTTCTACAAGCAATCATACTACCTCGAGATTGA
Protein sequence

>MS.gene47046.t1

MSSLSGTNKGLKKEKWSKEEDEILKAYVEKHGTRNWDEVSKNTGLAHFGRSCRFRWYNNLQPGVKKGPFSKEEENKVFQLRKKFGGFKWSKIARELPGRSDNDIKNFWNARKRKHEKRGLSPFPNNMELDDELNGGSSGQQVEDSQENNFDVSNKRFSKLVDDSNMFYNNGEVLLQAIILPRD