Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47245.t1 | GAU33477.1 | 39.1 | 522 | 277 | 13 | 5 | 490 | 12 | 528 | 3.10E-82 | 316.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47245.t1 | Q9SZL8 | 34.3 | 207 | 127 | 5 | 4 | 202 | 35 | 240 | 2.8e-20 | 101.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47245.t1 | A0A2Z6NTS8 | 39.1 | 522 | 277 | 13 | 5 | 490 | 12 | 528 | 2.2e-82 | 316.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene47245.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47245.t1 | MTR_7g446520 | 40.594 | 202 | 95 | 3 | 6 | 198 | 47 | 232 | 9.88e-39 | 145 |
| MS.gene47245.t1 | MTR_8g035530 | 76.316 | 76 | 17 | 1 | 28 | 102 | 1 | 76 | 4.48e-32 | 118 |
| MS.gene47245.t1 | MTR_7g028855 | 44.079 | 152 | 80 | 1 | 33 | 179 | 112 | 263 | 1.73e-31 | 127 |
| MS.gene47245.t1 | MTR_7g446480 | 53.409 | 88 | 41 | 0 | 113 | 200 | 140 | 227 | 7.03e-27 | 111 |
| MS.gene47245.t1 | MTR_7g446510 | 52.273 | 88 | 42 | 0 | 113 | 200 | 155 | 242 | 9.55e-25 | 105 |
| MS.gene47245.t1 | MTR_5g076070 | 30.120 | 166 | 111 | 2 | 38 | 198 | 50 | 215 | 1.16e-24 | 104 |
| MS.gene47245.t1 | MTR_3g080590 | 54.651 | 86 | 39 | 0 | 5 | 90 | 69 | 154 | 7.12e-24 | 98.6 |
| MS.gene47245.t1 | MTR_1g070355 | 30.303 | 165 | 110 | 1 | 41 | 200 | 74 | 238 | 4.06e-21 | 97.4 |
| MS.gene47245.t1 | MTR_6g022080 | 29.240 | 171 | 114 | 2 | 34 | 198 | 78 | 247 | 4.83e-21 | 93.2 |
| MS.gene47245.t1 | MTR_0402s0040 | 32.500 | 160 | 103 | 3 | 45 | 200 | 30 | 188 | 5.07e-18 | 87.4 |
| MS.gene47245.t1 | MTR_6g051425 | 27.326 | 172 | 116 | 3 | 40 | 203 | 16 | 186 | 1.71e-14 | 75.5 |
| MS.gene47245.t1 | MTR_7g061980 | 33.945 | 109 | 66 | 2 | 44 | 148 | 13 | 119 | 8.55e-14 | 68.6 |
| MS.gene47245.t1 | MTR_5g015480 | 33.077 | 130 | 80 | 3 | 45 | 167 | 60 | 189 | 3.66e-13 | 70.1 |
| MS.gene47245.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 59 | 158 | 1.16e-12 | 68.2 |
| MS.gene47245.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 59 | 158 | 1.27e-12 | 68.2 |
| MS.gene47245.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 77 | 176 | 1.97e-12 | 67.8 |
| MS.gene47245.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 79 | 178 | 2.04e-12 | 67.8 |
| MS.gene47245.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 79 | 178 | 2.20e-12 | 67.8 |
| MS.gene47245.t1 | MTR_2g098920 | 35.514 | 107 | 67 | 2 | 39 | 143 | 78 | 184 | 2.23e-12 | 68.2 |
| MS.gene47245.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 119 | 218 | 2.52e-12 | 68.2 |
| MS.gene47245.t1 | MTR_7g074790 | 26.263 | 198 | 116 | 5 | 44 | 233 | 13 | 188 | 1.88e-11 | 64.7 |
| MS.gene47245.t1 | MTR_1g008290 | 30.000 | 120 | 73 | 3 | 81 | 200 | 1 | 109 | 2.33e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47245.t1 | AT4G38180 | 34.762 | 210 | 127 | 6 | 2 | 202 | 32 | 240 | 1.42e-21 | 99.8 |
| MS.gene47245.t1 | AT3G07500 | 35.616 | 146 | 81 | 5 | 22 | 157 | 8 | 150 | 3.48e-15 | 75.5 |
| MS.gene47245.t1 | AT3G59470 | 35.514 | 107 | 67 | 2 | 39 | 143 | 68 | 174 | 1.51e-12 | 68.2 |
| MS.gene47245.t1 | AT3G59470 | 35.514 | 107 | 67 | 2 | 39 | 143 | 68 | 174 | 1.51e-12 | 68.2 |
| MS.gene47245.t1 | AT3G59470 | 35.514 | 107 | 67 | 2 | 39 | 143 | 80 | 186 | 1.80e-12 | 68.2 |
| MS.gene47245.t1 | AT4G12850 | 38.235 | 102 | 61 | 2 | 39 | 139 | 9 | 109 | 5.67e-12 | 63.9 |
| MS.gene47245.t1 | AT4G12850 | 36.522 | 115 | 68 | 3 | 39 | 152 | 9 | 119 | 1.25e-11 | 63.2 |
| MS.gene47245.t1 | AT1G10240 | 28.324 | 173 | 115 | 5 | 44 | 207 | 51 | 223 | 5.67e-11 | 65.9 |
| MS.gene47245.t1 | AT1G10240 | 28.324 | 173 | 115 | 5 | 44 | 207 | 51 | 223 | 5.67e-11 | 65.9 |
| MS.gene47245.t1 | AT4G12850 | 35.246 | 122 | 74 | 3 | 39 | 156 | 9 | 129 | 8.03e-11 | 62.0 |
Find 119 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTAATAAGTGGAGAGTTTC+TGG | 0.119642 | 6.3:+18537490 | MS.gene47245:CDS |
| TGTTAGAACCTGTCATATTT+TGG | 0.145212 | 6.3:+18537630 | MS.gene47245:CDS |
| AATTGTCTGCTCGTGGAAAT+TGG | 0.180295 | 6.3:-18539955 | None:intergenic |
| GTCTCATGGCACAAATAATA+TGG | 0.183652 | 6.3:-18538817 | None:intergenic |
| GTAATCATCCTTTGCTGATT+TGG | 0.196309 | 6.3:-18538888 | None:intergenic |
| CATCTTTCCATGTTACATTT+TGG | 0.217563 | 6.3:-18539793 | None:intergenic |
| CTCTATTTATGTTAGTTTAT+GGG | 0.247034 | 6.3:+18540118 | MS.gene47245:intron |
| AACGTAGATGCAATTTGATT+TGG | 0.260815 | 6.3:-18539893 | None:intergenic |
| AAAATTGATGCACCTTGATT+TGG | 0.276898 | 6.3:-18539929 | None:intergenic |
| TCACTCAATTGACGGTTCTT+AGG | 0.285255 | 6.3:-18537568 | None:intergenic |
| AAGACCAATCCATCTGTTAT+TGG | 0.288862 | 6.3:+18539103 | MS.gene47245:CDS |
| CATTCAAGTTCGGTTGGATA+TGG | 0.312603 | 6.3:+18539986 | MS.gene47245:CDS |
| CCTTTGGCCTTGGCTTTGAT+AGG | 0.324333 | 6.3:-18539130 | None:intergenic |
| TTGGCGCCGGTAAAATAATT+AGG | 0.326324 | 6.3:-18539830 | None:intergenic |
| TTGCTTGTGATTCGAGAGTT+TGG | 0.328361 | 6.3:-18540200 | None:intergenic |
| ATTGTCTGCTCGTGGAAATT+GGG | 0.337604 | 6.3:-18539954 | None:intergenic |
| ACGAGGGGCACCTTTGGCCT+TGG | 0.345904 | 6.3:-18539140 | None:intergenic |
| TGAAGAAGGAAAAGAGGATA+TGG | 0.353695 | 6.3:+18537186 | MS.gene47245:CDS |
| TGGATACTTACAAGAAGATT+AGG | 0.354642 | 6.3:+18537206 | MS.gene47245:CDS |
| TCCAACCCGTTATGCTCATT+TGG | 0.356553 | 6.3:+18537543 | MS.gene47245:CDS |
| GCAAGGAGGTCATGAGAGTC+TGG | 0.365097 | 6.3:+18537669 | MS.gene47245:CDS |
| GCAATTTGATTTGGAAATTG+AGG | 0.377041 | 6.3:-18539884 | None:intergenic |
| CTTCTTACGAGGGGCACCTT+TGG | 0.378868 | 6.3:-18539146 | None:intergenic |
| AAGATCGGAACACTTTGAAT+TGG | 0.379246 | 6.3:-18539860 | None:intergenic |
| GCAAACGATGGAGACATAAA+TGG | 0.387588 | 6.3:+18537130 | MS.gene47245:CDS |
| ACATCACGTCCAGCTAGTTC+TGG | 0.392972 | 6.3:-18539238 | None:intergenic |
| ATAGCCTCTTTATAATCATC+TGG | 0.427795 | 6.3:-18539019 | None:intergenic |
| TCTGATAAAGCCCTTGTTGA+TGG | 0.437123 | 6.3:+18537592 | MS.gene47245:CDS |
| TATCAGATTCACTCAATTGA+CGG | 0.439464 | 6.3:-18537576 | None:intergenic |
| CTGATAGTCTAATTTGCAAA+AGG | 0.440681 | 6.3:+18538861 | MS.gene47245:CDS |
| TGTAGACAGTTTGAACGGAT+TGG | 0.441359 | 6.3:+18538782 | MS.gene47245:intron |
| AGAAGAAATCATCTAGGAAA+AGG | 0.452672 | 6.3:+18539167 | MS.gene47245:CDS |
| GGATACTTACAAGAAGATTA+GGG | 0.465987 | 6.3:+18537207 | MS.gene47245:CDS |
| CAAGAAGATTAGGGAATTGA+CGG | 0.467663 | 6.3:+18537216 | MS.gene47245:CDS |
| AGGAACCAAATGAGCATAAC+GGG | 0.471013 | 6.3:-18537548 | None:intergenic |
| ACTCAAAATTATCATCACTT+TGG | 0.472391 | 6.3:-18540235 | None:intergenic |
| CAATAAAAGAAGATCAAAAC+AGG | 0.473627 | 6.3:+18539485 | MS.gene47245:CDS |
| ATTTATGTCTCCATCGTTTG+CGG | 0.473976 | 6.3:-18537128 | None:intergenic |
| TTTCCCATCACATTCAAGTT+CGG | 0.475541 | 6.3:+18539976 | MS.gene47245:CDS |
| AATGGTGTGTTTAATGAAGA+AGG | 0.477078 | 6.3:+18537172 | MS.gene47245:CDS |
| GAAGATTTAGCCAGCGGTAA+TGG | 0.477870 | 6.3:+18537154 | MS.gene47245:CDS |
| TAAATGTTGATACTAATAAG+TGG | 0.482914 | 6.3:+18537479 | MS.gene47245:CDS |
| CCATCACATTCAAGTTCGGT+TGG | 0.483093 | 6.3:+18539980 | MS.gene47245:CDS |
| GTTTATGGGTGCCTTGGAGA+TGG | 0.483103 | 6.3:+18540132 | MS.gene47245:intron |
| AACTCTCGAATCACAAGCAA+TGG | 0.493257 | 6.3:+18540203 | MS.gene47245:CDS |
| TCTCATGGCACAAATAATAT+GGG | 0.494840 | 6.3:-18538816 | None:intergenic |
| AGTCATGTGCTCGTGTCTCA+TGG | 0.495705 | 6.3:-18538831 | None:intergenic |
| ATGTTAGTTTATGGGTGCCT+TGG | 0.495975 | 6.3:+18540126 | MS.gene47245:intron |
| GGATGATGATATAAGAGGAT+TGG | 0.496802 | 6.3:+18537237 | MS.gene47245:CDS |
| TTGACGGATGATGATATAAG+AGG | 0.497315 | 6.3:+18537232 | MS.gene47245:CDS |
| GAAATCTATGCAGATTGTCA+TGG | 0.498853 | 6.3:+18537295 | MS.gene47245:CDS |
| TATAACTACTTATACAATGA+AGG | 0.501991 | 6.3:+18537712 | MS.gene47245:CDS |
| TTGCACTAGATTGAAAATGA+AGG | 0.505947 | 6.3:+18539570 | MS.gene47245:intron |
| TTTGGAAATTGAGGAAAGAT+CGG | 0.506335 | 6.3:-18539875 | None:intergenic |
| ATCACCAATAACAGATGGAT+TGG | 0.508027 | 6.3:-18539107 | None:intergenic |
| GATGTAAACAAAGATGATGA+TGG | 0.508994 | 6.3:+18537337 | MS.gene47245:CDS |
| TAGATTGAAAATGAAGGGAT+TGG | 0.509056 | 6.3:+18539576 | MS.gene47245:intron |
| AGATGATTATAAAGAGGCTA+TGG | 0.524840 | 6.3:+18539021 | MS.gene47245:CDS |
| AATTGGAACACCGTTGGCGC+CGG | 0.526797 | 6.3:-18539843 | None:intergenic |
| AGAAACAAAGTACATATTCG+AGG | 0.529955 | 6.3:+18537413 | MS.gene47245:CDS |
| ACTTTGAATTGGAACACCGT+TGG | 0.530199 | 6.3:-18539849 | None:intergenic |
| TGCAGATTGTCATGGGTTTG+TGG | 0.531824 | 6.3:+18537303 | MS.gene47245:CDS |
| AAATCTATGCAGATTGTCAT+GGG | 0.533515 | 6.3:+18537296 | MS.gene47245:CDS |
| ATAGTCTAATTTGCAAAAGG+TGG | 0.533689 | 6.3:+18538864 | MS.gene47245:CDS |
| CAAAATGTAACATGGAAAGA+TGG | 0.535009 | 6.3:+18539794 | MS.gene47245:CDS |
| GTAAGAAGAAGAAATCATCT+AGG | 0.537292 | 6.3:+18539161 | MS.gene47245:CDS |
| TGCTAATCGTTCCATCTCCA+AGG | 0.539064 | 6.3:-18540143 | None:intergenic |
| TTGTCTGCTCGTGGAAATTG+GGG | 0.539211 | 6.3:-18539953 | None:intergenic |
| ATTTAAATGGCCGCAAACGA+TGG | 0.539363 | 6.3:+18537118 | None:intergenic |
| TGCAGAACACTTAGTTCGAA+TGG | 0.539821 | 6.3:-18537440 | None:intergenic |
| TGCACTAGATTGAAAATGAA+GGG | 0.542557 | 6.3:+18539571 | MS.gene47245:intron |
| TAGGAACCAAATGAGCATAA+CGG | 0.549503 | 6.3:-18537549 | None:intergenic |
| CAACCGAACTTGAATGTGAT+GGG | 0.551023 | 6.3:-18539979 | None:intergenic |
| CATAAAACCCAAAATATGAC+AGG | 0.552239 | 6.3:-18537638 | None:intergenic |
| CCAACCGAACTTGAATGTGA+TGG | 0.552349 | 6.3:-18539980 | None:intergenic |
| ACATCCAGATGATTATAAAG+AGG | 0.553282 | 6.3:+18539015 | MS.gene47245:CDS |
| ATTAAACACACCATTACCGC+TGG | 0.561779 | 6.3:-18537164 | None:intergenic |
| ACTCTCGAATCACAAGCAAT+GGG | 0.562552 | 6.3:+18540204 | MS.gene47245:CDS |
| TGATTATAAAGAGGCTATGG+AGG | 0.565059 | 6.3:+18539024 | MS.gene47245:CDS |
| CAAAACTGTCCAGAACTAGC+TGG | 0.566062 | 6.3:+18539229 | MS.gene47245:CDS |
| GTTTAATGAAGAAGGAAAAG+AGG | 0.567512 | 6.3:+18537180 | MS.gene47245:CDS |
| ATAGGATCACCAATAACAGA+TGG | 0.568307 | 6.3:-18539112 | None:intergenic |
| ATGATTTCTTCTTCTTACGA+GGG | 0.569773 | 6.3:-18539156 | None:intergenic |
| GATGATTTCTTCTTCTTACG+AGG | 0.571136 | 6.3:-18539157 | None:intergenic |
| AACGGGTTGGAGTTAACTCA+TGG | 0.579913 | 6.3:-18537531 | None:intergenic |
| CTACTTATACAATGAAGGAA+AGG | 0.580957 | 6.3:+18537717 | MS.gene47245:CDS |
| AATGTCCAGAGTCAAGATCA+AGG | 0.583155 | 6.3:+18539734 | MS.gene47245:intron |
| ATGTAAACAAAGATGATGAT+GGG | 0.584402 | 6.3:+18537338 | MS.gene47245:CDS |
| GTGATTGTAGACAGTTTGAA+CGG | 0.585179 | 6.3:+18538777 | MS.gene47245:intron |
| TCTAAATGCAGTCAATGAAG+AGG | 0.588445 | 6.3:+18539261 | MS.gene47245:CDS |
| AGTTAACTCATGGTTGTGTG+AGG | 0.591294 | 6.3:-18537521 | None:intergenic |
| GATTATAAAGAGGCTATGGA+GGG | 0.593735 | 6.3:+18539025 | MS.gene47245:CDS |
| ACCAAATGAGCATAACGGGT+TGG | 0.596668 | 6.3:-18537544 | None:intergenic |
| GTTTGTGTGAGAAAATAAAG+AGG | 0.597142 | 6.3:+18539056 | MS.gene47245:CDS |
| CAAGGAGGTCATGAGAGTCT+GGG | 0.599621 | 6.3:+18537670 | MS.gene47245:CDS |
| TCGATTAGTATGTAATAGAG+AGG | 0.600970 | 6.3:+18537375 | MS.gene47245:CDS |
| ATAAAGAGGCGTCGTGAGAG+TGG | 0.603066 | 6.3:+18539070 | MS.gene47245:CDS |
| CCTATCAAAGCCAAGGCCAA+AGG | 0.609665 | 6.3:+18539130 | MS.gene47245:CDS |
| TGGAAGACCAAAATGTAACA+TGG | 0.612794 | 6.3:+18539786 | MS.gene47245:CDS |
| GTGTTGATAAGAGTTGTGAC+AGG | 0.616075 | 6.3:+18539415 | MS.gene47245:CDS |
| TACTCACAGGTGTATGATGA+GGG | 0.616777 | 6.3:-18540024 | None:intergenic |
| TGGTGATCCTATCAAAGCCA+AGG | 0.618217 | 6.3:+18539123 | MS.gene47245:CDS |
| GTGCATGAAGACCATCAACA+AGG | 0.624046 | 6.3:-18537603 | None:intergenic |
| AAAATGTTCATGTTCTGTCG+AGG | 0.625769 | 6.3:+18538947 | MS.gene47245:CDS |
| AAAATGGATGAGAATACATG+TGG | 0.630779 | 6.3:+18540166 | MS.gene47245:CDS |
| GTTAACTCATGGTTGTGTGA+GGG | 0.630795 | 6.3:-18537520 | None:intergenic |
| CGATTAGTATGTAATAGAGA+GGG | 0.642038 | 6.3:+18537376 | MS.gene47245:CDS |
| GCACAAATAATATGGGAACA+TGG | 0.643217 | 6.3:-18538809 | None:intergenic |
| TGATTTCTTCTTCTTACGAG+GGG | 0.643305 | 6.3:-18539155 | None:intergenic |
| ATACTCACAGGTGTATGATG+AGG | 0.644284 | 6.3:-18540025 | None:intergenic |
| AAGGTGGACCAAATCAGCAA+AGG | 0.645642 | 6.3:+18538880 | MS.gene47245:CDS |
| GATGGGAAATTGTCTGCTCG+TGG | 0.649132 | 6.3:-18539962 | None:intergenic |
| ATTATAAAGAGGCTATGGAG+GGG | 0.655805 | 6.3:+18539026 | MS.gene47245:CDS |
| TTCGAACTAAGTGTTCTGCA+AGG | 0.661356 | 6.3:+18537443 | MS.gene47245:CDS |
| TGCATGAAGACCATCAACAA+GGG | 0.667132 | 6.3:-18537602 | None:intergenic |
| AATGGTGAAGATTTAGCCAG+CGG | 0.677055 | 6.3:+18537148 | MS.gene47245:CDS |
| GTTGATGGTCTTCATGCACA+CGG | 0.677402 | 6.3:+18537607 | MS.gene47245:CDS |
| TGTCTGCTCGTGGAAATTGG+GGG | 0.715334 | 6.3:-18539952 | None:intergenic |
| TTTATGATGGCTCAGCAAGG+AGG | 0.716579 | 6.3:+18537655 | MS.gene47245:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAGAAAATTTATTTTGGT+CGG | + | chr6.3:18537845-18537864 | MS.gene47245:intron | 15.0% |
| !! | ATAATTAGCATAAATCAATG+AGG | - | chr6.3:18538237-18538256 | None:intergenic | 20.0% |
| !! | TAAATGTTGATACTAATAAG+TGG | + | chr6.3:18537479-18537498 | MS.gene47245:CDS | 20.0% |
| !! | TATAACTACTTATACAATGA+AGG | + | chr6.3:18537712-18537731 | MS.gene47245:CDS | 20.0% |
| !!! | AAGTTTAAGATGAATAGATT+TGG | + | chr6.3:18538698-18538717 | MS.gene47245:intron | 20.0% |
| !!! | AATTATAATTTGTTTGCACA+GGG | + | chr6.3:18539393-18539412 | MS.gene47245:intron | 20.0% |
| !!! | CTCTATTTATGTTAGTTTAT+GGG | + | chr6.3:18540118-18540137 | MS.gene47245:intron | 20.0% |
| !!! | GACGTTTAGAAAATTTATTT+TGG | + | chr6.3:18537841-18537860 | MS.gene47245:intron | 20.0% |
| !!! | TAATTATAATTTGTTTGCAC+AGG | + | chr6.3:18539392-18539411 | MS.gene47245:intron | 20.0% |
| !!! | TATGTTCCTAATTATTTTAC+CGG | + | chr6.3:18539824-18539843 | MS.gene47245:CDS | 20.0% |
| !!! | TCTCTATTTATGTTAGTTTA+TGG | + | chr6.3:18540117-18540136 | MS.gene47245:intron | 20.0% |
| !!! | TTATCTATCATGTTTTCATT+AGG | - | chr6.3:18539606-18539625 | None:intergenic | 20.0% |
| ! | ACAATTTATCAGACAATACA+TGG | + | chr6.3:18538303-18538322 | MS.gene47245:intron | 25.0% |
| ! | AGTAGTTTCTCATAGTTAAT+TGG | + | chr6.3:18539654-18539673 | MS.gene47245:intron | 25.0% |
| ! | ATAGATAAAAACATGCACAT+AGG | + | chr6.3:18539618-18539637 | MS.gene47245:CDS | 25.0% |
| ! | ATGTAAACAAAGATGATGAT+GGG | + | chr6.3:18537338-18537357 | MS.gene47245:CDS | 25.0% |
| ! | CAATAAAAGAAGATCAAAAC+AGG | + | chr6.3:18539485-18539504 | MS.gene47245:CDS | 25.0% |
| ! | CAATTTATCAGACAATACAT+GGG | + | chr6.3:18538304-18538323 | MS.gene47245:intron | 25.0% |
| !! | GTATCTAGTTTATCTTGATA+AGG | + | chr6.3:18538736-18538755 | MS.gene47245:intron | 25.0% |
| !!! | AAGATACTTGATACTTTTTG+TGG | + | chr6.3:18539514-18539533 | MS.gene47245:intron | 25.0% |
| !!! | TCATATTTTGGGTTTTATGA+TGG | + | chr6.3:18537642-18537661 | MS.gene47245:CDS | 25.0% |
| AAAATGGATGAGAATACATG+TGG | + | chr6.3:18540166-18540185 | MS.gene47245:CDS | 30.0% | |
| AAAATTGATGCACCTTGATT+TGG | - | chr6.3:18539932-18539951 | None:intergenic | 30.0% | |
| AAATCTATGCAGATTGTCAT+GGG | + | chr6.3:18537296-18537315 | MS.gene47245:CDS | 30.0% | |
| AAATTATAGTTCCTCCATGA+TGG | - | chr6.3:18537980-18537999 | None:intergenic | 30.0% | |
| AACGTAGATGCAATTTGATT+TGG | - | chr6.3:18539896-18539915 | None:intergenic | 30.0% | |
| AAGCTTCAAAAATCTTTACG+AGG | + | chr6.3:18538591-18538610 | MS.gene47245:intron | 30.0% | |
| AATGGTGTGTTTAATGAAGA+AGG | + | chr6.3:18537172-18537191 | MS.gene47245:CDS | 30.0% | |
| AATTGACTATGAGTGATTTG+GGG | + | chr6.3:18537881-18537900 | MS.gene47245:intron | 30.0% | |
| ACATCCAGATGATTATAAAG+AGG | + | chr6.3:18539015-18539034 | MS.gene47245:CDS | 30.0% | |
| AGAAACAAAGTACATATTCG+AGG | + | chr6.3:18537413-18537432 | MS.gene47245:CDS | 30.0% | |
| AGAAGAAATCATCTAGGAAA+AGG | + | chr6.3:18539167-18539186 | MS.gene47245:CDS | 30.0% | |
| AGATGATTATAAAGAGGCTA+TGG | + | chr6.3:18539021-18539040 | MS.gene47245:CDS | 30.0% | |
| ATAGAGCTGTAAAAGAATAC+AGG | + | chr6.3:18538489-18538508 | MS.gene47245:intron | 30.0% | |
| ATAGCCTCTTTATAATCATC+TGG | - | chr6.3:18539022-18539041 | None:intergenic | 30.0% | |
| ATATGAGATGAAGACAATGT+GGG | + | chr6.3:18538337-18538356 | MS.gene47245:intron | 30.0% | |
| ATGATTTCTTCTTCTTACGA+GGG | - | chr6.3:18539159-18539178 | None:intergenic | 30.0% | |
| CAAAAACACATTTAACACGA+TGG | - | chr6.3:18539342-18539361 | None:intergenic | 30.0% | |
| CAAAATGTAACATGGAAAGA+TGG | + | chr6.3:18539794-18539813 | MS.gene47245:CDS | 30.0% | |
| CAAATCACTCATAGTCAATT+CGG | - | chr6.3:18537881-18537900 | None:intergenic | 30.0% | |
| CATAAAACCCAAAATATGAC+AGG | - | chr6.3:18537641-18537660 | None:intergenic | 30.0% | |
| CGATTAGTATGTAATAGAGA+GGG | + | chr6.3:18537376-18537395 | MS.gene47245:CDS | 30.0% | |
| CTACTTATACAATGAAGGAA+AGG | + | chr6.3:18537717-18537736 | MS.gene47245:CDS | 30.0% | |
| CTCAATTTCAAATTTGTCCA+CGG | - | chr6.3:18538261-18538280 | None:intergenic | 30.0% | |
| GAAGTTTACACAACAGAATA+AGG | + | chr6.3:18537819-18537838 | MS.gene47245:intron | 30.0% | |
| GAATTGACTATGAGTGATTT+GGG | + | chr6.3:18537880-18537899 | MS.gene47245:intron | 30.0% | |
| GATGTAAACAAAGATGATGA+TGG | + | chr6.3:18537337-18537356 | MS.gene47245:CDS | 30.0% | |
| GATTTATGCTAATTATACCG+TGG | + | chr6.3:18538241-18538260 | MS.gene47245:intron | 30.0% | |
| GGATACTTACAAGAAGATTA+GGG | + | chr6.3:18537207-18537226 | MS.gene47245:CDS | 30.0% | |
| GTAAACTTCGAAAAGAACAT+TGG | - | chr6.3:18537808-18537827 | None:intergenic | 30.0% | |
| GTAAGAAGAAGAAATCATCT+AGG | + | chr6.3:18539161-18539180 | MS.gene47245:CDS | 30.0% | |
| GTATCATAAACAGCCTAAAT+GGG | + | chr6.3:18538073-18538092 | MS.gene47245:intron | 30.0% | |
| GTTTAATGAAGAAGGAAAAG+AGG | + | chr6.3:18537180-18537199 | MS.gene47245:CDS | 30.0% | |
| GTTTGTGTGAGAAAATAAAG+AGG | + | chr6.3:18539056-18539075 | MS.gene47245:CDS | 30.0% | |
| TAGATTGAAAATGAAGGGAT+TGG | + | chr6.3:18539576-18539595 | MS.gene47245:intron | 30.0% | |
| TATCAGATTCACTCAATTGA+CGG | - | chr6.3:18537579-18537598 | None:intergenic | 30.0% | |
| TCGATTAGTATGTAATAGAG+AGG | + | chr6.3:18537375-18537394 | MS.gene47245:CDS | 30.0% | |
| TCTCATGGCACAAATAATAT+GGG | - | chr6.3:18538819-18538838 | None:intergenic | 30.0% | |
| TGCACTAGATTGAAAATGAA+GGG | + | chr6.3:18539571-18539590 | MS.gene47245:intron | 30.0% | |
| TGGATACTTACAAGAAGATT+AGG | + | chr6.3:18537206-18537225 | MS.gene47245:CDS | 30.0% | |
| TGTATCATAAACAGCCTAAA+TGG | + | chr6.3:18538072-18538091 | MS.gene47245:intron | 30.0% | |
| TGTGAAGAATCCAAAATTCT+TGG | + | chr6.3:18538202-18538221 | MS.gene47245:intron | 30.0% | |
| TGTTGACAACAAAGTTACAT+AGG | + | chr6.3:18538558-18538577 | MS.gene47245:intron | 30.0% | |
| TTGCACTAGATTGAAAATGA+AGG | + | chr6.3:18539570-18539589 | MS.gene47245:intron | 30.0% | |
| TTTGGAAATTGAGGAAAGAT+CGG | - | chr6.3:18539878-18539897 | None:intergenic | 30.0% | |
| ! | AATTTGAAATTGAGTGGAAG+AGG | + | chr6.3:18538267-18538286 | MS.gene47245:intron | 30.0% |
| ! | ATAGTCTAATTTGCAAAAGG+TGG | + | chr6.3:18538864-18538883 | MS.gene47245:CDS | 30.0% |
| ! | ATTTGAAATTGAGTGGAAGA+GGG | + | chr6.3:18538268-18538287 | MS.gene47245:intron | 30.0% |
| ! | CATCTTTCCATGTTACATTT+TGG | - | chr6.3:18539796-18539815 | None:intergenic | 30.0% |
| ! | CATGGAGGAACTATAATTTT+TGG | + | chr6.3:18537981-18538000 | MS.gene47245:intron | 30.0% |
| ! | CTGATAGTCTAATTTGCAAA+AGG | + | chr6.3:18538861-18538880 | MS.gene47245:CDS | 30.0% |
| ! | CTTTTGCAAATTAGACTATC+AGG | - | chr6.3:18538863-18538882 | None:intergenic | 30.0% |
| ! | GAAAAGTCTTCCAAGAATTT+TGG | - | chr6.3:18538215-18538234 | None:intergenic | 30.0% |
| ! | GTTAGAACCTGTCATATTTT+GGG | + | chr6.3:18537631-18537650 | MS.gene47245:CDS | 30.0% |
| ! | TGGACAAATTTGAAATTGAG+TGG | + | chr6.3:18538261-18538280 | MS.gene47245:intron | 30.0% |
| ! | TGTTAGAACCTGTCATATTT+TGG | + | chr6.3:18537630-18537649 | MS.gene47245:CDS | 30.0% |
| !! | CCTTGATTTGGAAAAAATTG+TGG | - | chr6.3:18539920-18539939 | None:intergenic | 30.0% |
| !! | GCAATTTGATTTGGAAATTG+AGG | - | chr6.3:18539887-18539906 | None:intergenic | 30.0% |
| !! | TTTGGTCTTCCATTTTAACA+GGG | - | chr6.3:18539778-18539797 | None:intergenic | 30.0% |
| !! | TTTTGGTCTTCCATTTTAAC+AGG | - | chr6.3:18539779-18539798 | None:intergenic | 30.0% |
| !!! | AAGCCTCTTGTTATTTTTTC+TGG | + | chr6.3:18537948-18537967 | MS.gene47245:intron | 30.0% |
| !!! | AGCCTCTTGTTATTTTTTCT+GGG | + | chr6.3:18537949-18537968 | MS.gene47245:intron | 30.0% |
| !!! | ATGCGAGAAAACTTTTTTTG+TGG | + | chr6.3:18538371-18538390 | MS.gene47245:intron | 30.0% |
| !!! | CCACAATTTTTTCCAAATCA+AGG | + | chr6.3:18539917-18539936 | MS.gene47245:CDS | 30.0% |
| AAAATGTTCATGTTCTGTCG+AGG | + | chr6.3:18538947-18538966 | MS.gene47245:CDS | 35.0% | |
| AAGACCAATCCATCTGTTAT+TGG | + | chr6.3:18539103-18539122 | MS.gene47245:CDS | 35.0% | |
| AAGATCGGAACACTTTGAAT+TGG | - | chr6.3:18539863-18539882 | None:intergenic | 35.0% | |
| AATGAGAGAAGCTATCAAAG+AGG | + | chr6.3:18538118-18538137 | MS.gene47245:intron | 35.0% | |
| ACTAATAAGTGGAGAGTTTC+TGG | + | chr6.3:18537490-18537509 | MS.gene47245:CDS | 35.0% | |
| ATACAGGCAGAAAGAGTTAA+TGG | + | chr6.3:18538505-18538524 | MS.gene47245:intron | 35.0% | |
| ATAGGATCACCAATAACAGA+TGG | - | chr6.3:18539115-18539134 | None:intergenic | 35.0% | |
| ATCACCAATAACAGATGGAT+TGG | - | chr6.3:18539110-18539129 | None:intergenic | 35.0% | |
| ATTATAAAGAGGCTATGGAG+GGG | + | chr6.3:18539026-18539045 | MS.gene47245:CDS | 35.0% | |
| ATTTATGTCTCCATCGTTTG+CGG | - | chr6.3:18537131-18537150 | None:intergenic | 35.0% | |
| CAAGAAGATTAGGGAATTGA+CGG | + | chr6.3:18537216-18537235 | MS.gene47245:CDS | 35.0% | |
| CACCCAGAAAAAATAACAAG+AGG | - | chr6.3:18537954-18537973 | None:intergenic | 35.0% | |
| CATATGAGATGAAGACAATG+TGG | + | chr6.3:18538336-18538355 | MS.gene47245:intron | 35.0% | |
| CGAATTGACTATGAGTGATT+TGG | + | chr6.3:18537879-18537898 | MS.gene47245:intron | 35.0% | |
| GAAATCTATGCAGATTGTCA+TGG | + | chr6.3:18537295-18537314 | MS.gene47245:CDS | 35.0% | |
| GAAGGAAAGGTAAGAATAGA+AGG | + | chr6.3:18537730-18537749 | MS.gene47245:intron | 35.0% | |
| GATGATTTCTTCTTCTTACG+AGG | - | chr6.3:18539160-18539179 | None:intergenic | 35.0% | |
| GATGGAACGATTAGCAAAAA+TGG | + | chr6.3:18540150-18540169 | MS.gene47245:CDS | 35.0% | |
| GATTATAAAGAGGCTATGGA+GGG | + | chr6.3:18539025-18539044 | MS.gene47245:CDS | 35.0% | |
| GCACAAATAATATGGGAACA+TGG | - | chr6.3:18538812-18538831 | None:intergenic | 35.0% | |
| GGATGATGATATAAGAGGAT+TGG | + | chr6.3:18537237-18537256 | MS.gene47245:CDS | 35.0% | |
| GTCTCATGGCACAAATAATA+TGG | - | chr6.3:18538820-18538839 | None:intergenic | 35.0% | |
| GTGATTGTAGACAGTTTGAA+CGG | + | chr6.3:18538777-18538796 | MS.gene47245:intron | 35.0% | |
| TAGGAACCAAATGAGCATAA+CGG | - | chr6.3:18537552-18537571 | None:intergenic | 35.0% | |
| TCTAAATGCAGTCAATGAAG+AGG | + | chr6.3:18539261-18539280 | MS.gene47245:CDS | 35.0% | |
| TGAAGAAGGAAAAGAGGATA+TGG | + | chr6.3:18537186-18537205 | MS.gene47245:CDS | 35.0% | |
| TGAATGTTGTGTATACTCAC+AGG | - | chr6.3:18540040-18540059 | None:intergenic | 35.0% | |
| TGATAAACCCCCTGTTAAAA+TGG | + | chr6.3:18539766-18539785 | MS.gene47245:CDS | 35.0% | |
| TGATTATAAAGAGGCTATGG+AGG | + | chr6.3:18539024-18539043 | MS.gene47245:CDS | 35.0% | |
| TGATTTCTTCTTCTTACGAG+GGG | - | chr6.3:18539158-18539177 | None:intergenic | 35.0% | |
| TGGAAGACCAAAATGTAACA+TGG | + | chr6.3:18539786-18539805 | MS.gene47245:CDS | 35.0% | |
| TGTTGAAAGCAAAAACAGTC+TGG | + | chr6.3:18538445-18538464 | MS.gene47245:intron | 35.0% | |
| ! | GTAATCATCCTTTGCTGATT+TGG | - | chr6.3:18538891-18538910 | None:intergenic | 35.0% |
| ! | TGTAACTTTGTTGTCAACAC+AGG | - | chr6.3:18538557-18538576 | None:intergenic | 35.0% |
| ! | TTGACGGATGATGATATAAG+AGG | + | chr6.3:18537232-18537251 | MS.gene47245:CDS | 35.0% |
| ! | TTTCCCATCACATTCAAGTT+CGG | + | chr6.3:18539976-18539995 | MS.gene47245:CDS | 35.0% |
| !! | TTGGTCTTCCATTTTAACAG+GGG | - | chr6.3:18539777-18539796 | None:intergenic | 35.0% |
| AAACACGTGAGACATACAAG+TGG | + | chr6.3:18538024-18538043 | MS.gene47245:intron | 40.0% | |
| AACTCTCGAATCACAAGCAA+TGG | + | chr6.3:18540203-18540222 | MS.gene47245:CDS | 40.0% | |
| AATGGTGAAGATTTAGCCAG+CGG | + | chr6.3:18537148-18537167 | MS.gene47245:CDS | 40.0% | |
| AATGTCCAGAGTCAAGATCA+AGG | + | chr6.3:18539734-18539753 | MS.gene47245:intron | 40.0% | |
| AATTGTCTGCTCGTGGAAAT+TGG | - | chr6.3:18539958-18539977 | None:intergenic | 40.0% | |
| ACTCTCGAATCACAAGCAAT+GGG | + | chr6.3:18540204-18540223 | MS.gene47245:CDS | 40.0% | |
| ACTTTGAATTGGAACACCGT+TGG | - | chr6.3:18539852-18539871 | None:intergenic | 40.0% | |
| AGGAACCAAATGAGCATAAC+GGG | - | chr6.3:18537551-18537570 | None:intergenic | 40.0% | |
| AGTTAACTCATGGTTGTGTG+AGG | - | chr6.3:18537524-18537543 | None:intergenic | 40.0% | |
| ATACTCACAGGTGTATGATG+AGG | - | chr6.3:18540028-18540047 | None:intergenic | 40.0% | |
| ATTAAACACACCATTACCGC+TGG | - | chr6.3:18537167-18537186 | None:intergenic | 40.0% | |
| ATTGTCTGCTCGTGGAAATT+GGG | - | chr6.3:18539957-18539976 | None:intergenic | 40.0% | |
| CAACCGAACTTGAATGTGAT+GGG | - | chr6.3:18539982-18540001 | None:intergenic | 40.0% | |
| GCAAACGATGGAGACATAAA+TGG | + | chr6.3:18537130-18537149 | MS.gene47245:CDS | 40.0% | |
| GGAAAGGTAAGAATAGAAGG+TGG | + | chr6.3:18537733-18537752 | MS.gene47245:intron | 40.0% | |
| GTTAACTCATGGTTGTGTGA+GGG | - | chr6.3:18537523-18537542 | None:intergenic | 40.0% | |
| TACTCACAGGTGTATGATGA+GGG | - | chr6.3:18540027-18540046 | None:intergenic | 40.0% | |
| TCACTCAATTGACGGTTCTT+AGG | - | chr6.3:18537571-18537590 | None:intergenic | 40.0% | |
| TCATAAACAGCCTAAATGGG+TGG | + | chr6.3:18538076-18538095 | MS.gene47245:intron | 40.0% | |
| TCTGACCATGACAAAAACGT+TGG | + | chr6.3:18539298-18539317 | MS.gene47245:CDS | 40.0% | |
| TCTGATAAAGCCCTTGTTGA+TGG | + | chr6.3:18537592-18537611 | MS.gene47245:CDS | 40.0% | |
| TGACAAAAACGTTGGATGTG+AGG | + | chr6.3:18539306-18539325 | MS.gene47245:CDS | 40.0% | |
| TGAGTTTATGTCTTCACACC+CGG | - | chr6.3:18538411-18538430 | None:intergenic | 40.0% | |
| TGCAGAACACTTAGTTCGAA+TGG | - | chr6.3:18537443-18537462 | None:intergenic | 40.0% | |
| TGCATGAAGACCATCAACAA+GGG | - | chr6.3:18537605-18537624 | None:intergenic | 40.0% | |
| TGCTGCGTTGAGTTATTTGT+AGG | + | chr6.3:18537765-18537784 | MS.gene47245:intron | 40.0% | |
| TGTAGACAGTTTGAACGGAT+TGG | + | chr6.3:18538782-18538801 | MS.gene47245:intron | 40.0% | |
| TGTGGCATAAGAACTACATC+CGG | + | chr6.3:18538389-18538408 | MS.gene47245:intron | 40.0% | |
| TTCGAACTAAGTGTTCTGCA+AGG | + | chr6.3:18537443-18537462 | MS.gene47245:CDS | 40.0% | |
| TTGCATTTGACGCAACTTAC+AGG | + | chr6.3:18537910-18537929 | MS.gene47245:intron | 40.0% | |
| TTGCTTGTGATTCGAGAGTT+TGG | - | chr6.3:18540203-18540222 | None:intergenic | 40.0% | |
| ! | AGTCTGGTTGATTTCATGCA+TGG | + | chr6.3:18538461-18538480 | MS.gene47245:intron | 40.0% |
| ! | ATGTTAGTTTATGGGTGCCT+TGG | + | chr6.3:18540126-18540145 | MS.gene47245:intron | 40.0% |
| ! | CACATCCAACGTTTTTGTCA+TGG | - | chr6.3:18539306-18539325 | None:intergenic | 40.0% |
| ! | CATTCAAGTTCGGTTGGATA+TGG | + | chr6.3:18539986-18540005 | MS.gene47245:CDS | 40.0% |
| ! | GTGTTGATAAGAGTTGTGAC+AGG | + | chr6.3:18539415-18539434 | MS.gene47245:CDS | 40.0% |
| ! | TTTTCTGGGTGTAACCATCA+TGG | + | chr6.3:18537963-18537982 | MS.gene47245:intron | 40.0% |
| !! | AATTATTTTACCGGCGCCAA+CGG | + | chr6.3:18539833-18539852 | MS.gene47245:CDS | 40.0% |
| !! | GTTTTTGAGCAGTCTAGTCT+CGG | + | chr6.3:18538665-18538684 | MS.gene47245:intron | 40.0% |
| !! | TGGTCTTCCATTTTAACAGG+GGG | - | chr6.3:18539776-18539795 | None:intergenic | 40.0% |
| !! | TTGGCGCCGGTAAAATAATT+AGG | - | chr6.3:18539833-18539852 | None:intergenic | 40.0% |
| AAGGTGGACCAAATCAGCAA+AGG | + | chr6.3:18538880-18538899 | MS.gene47245:CDS | 45.0% | |
| CAAAACTGTCCAGAACTAGC+TGG | + | chr6.3:18539229-18539248 | MS.gene47245:CDS | 45.0% | |
| CAAAGACGATGCAACGAGTT+TGG | - | chr6.3:18538149-18538168 | None:intergenic | 45.0% | |
| CCAACCGAACTTGAATGTGA+TGG | - | chr6.3:18539983-18540002 | None:intergenic | 45.0% | |
| CCATCAGTAACCACCCATTT+AGG | - | chr6.3:18538089-18538108 | None:intergenic | 45.0% | |
| CCTAAATGGGTGGTTACTGA+TGG | + | chr6.3:18538086-18538105 | MS.gene47245:intron | 45.0% | |
| CGTTGCATCGTCTTTGTTCA+TGG | + | chr6.3:18538153-18538172 | MS.gene47245:intron | 45.0% | |
| GAAGATTTAGCCAGCGGTAA+TGG | + | chr6.3:18537154-18537173 | MS.gene47245:CDS | 45.0% | |
| GTGCATGAAGACCATCAACA+AGG | - | chr6.3:18537606-18537625 | None:intergenic | 45.0% | |
| GTGGCATAAGAACTACATCC+GGG | + | chr6.3:18538390-18538409 | MS.gene47245:intron | 45.0% | |
| TCACTCATAGTCAATTCGGC+TGG | - | chr6.3:18537877-18537896 | None:intergenic | 45.0% | |
| TCCAACCCGTTATGCTCATT+TGG | + | chr6.3:18537543-18537562 | MS.gene47245:CDS | 45.0% | |
| TGCAGATTGTCATGGGTTTG+TGG | + | chr6.3:18537303-18537322 | MS.gene47245:CDS | 45.0% | |
| TGCTAATCGTTCCATCTCCA+AGG | - | chr6.3:18540146-18540165 | None:intergenic | 45.0% | |
| TGGTGATCCTATCAAAGCCA+AGG | + | chr6.3:18539123-18539142 | MS.gene47245:CDS | 45.0% | |
| TTGTCTGCTCGTGGAAATTG+GGG | - | chr6.3:18539956-18539975 | None:intergenic | 45.0% | |
| TTTATGATGGCTCAGCAAGG+AGG | + | chr6.3:18537655-18537674 | MS.gene47245:CDS | 45.0% | |
| ! | CCATCACATTCAAGTTCGGT+TGG | + | chr6.3:18539980-18539999 | MS.gene47245:CDS | 45.0% |
| ! | CTATGAGTGATTTGGGGATG+TGG | + | chr6.3:18537887-18537906 | MS.gene47245:intron | 45.0% |
| !! | AACGGGTTGGAGTTAACTCA+TGG | - | chr6.3:18537534-18537553 | None:intergenic | 45.0% |
| !! | ACCAAATGAGCATAACGGGT+TGG | - | chr6.3:18537547-18537566 | None:intergenic | 45.0% |
| !! | ATGAGAGTCTGGGATTTTGC+AGG | + | chr6.3:18537680-18537699 | MS.gene47245:CDS | 45.0% |
| !! | GGTTTTATGATGGCTCAGCA+AGG | + | chr6.3:18537652-18537671 | MS.gene47245:CDS | 45.0% |
| !! | GTTGATGGTCTTCATGCACA+CGG | + | chr6.3:18537607-18537626 | MS.gene47245:CDS | 45.0% |
| ACATCACGTCCAGCTAGTTC+TGG | - | chr6.3:18539241-18539260 | None:intergenic | 50.0% | |
| AGTCATGTGCTCGTGTCTCA+TGG | - | chr6.3:18538834-18538853 | None:intergenic | 50.0% | |
| CAAGGAGGTCATGAGAGTCT+GGG | + | chr6.3:18537670-18537689 | MS.gene47245:CDS | 50.0% | |
| CAGCACCTTGATCTTGACTC+TGG | - | chr6.3:18539742-18539761 | None:intergenic | 50.0% | |
| CCTATCAAAGCCAAGGCCAA+AGG | + | chr6.3:18539130-18539149 | MS.gene47245:CDS | 50.0% | |
| GATGGGAAATTGTCTGCTCG+TGG | - | chr6.3:18539965-18539984 | None:intergenic | 50.0% | |
| GTTTATGGGTGCCTTGGAGA+TGG | + | chr6.3:18540132-18540151 | MS.gene47245:intron | 50.0% | |
| TCTGGGTGTAACCATCATGG+AGG | + | chr6.3:18537966-18537985 | MS.gene47245:intron | 50.0% | |
| TGTCTGCTCGTGGAAATTGG+GGG | - | chr6.3:18539955-18539974 | None:intergenic | 50.0% | |
| !! | ATAAAGAGGCGTCGTGAGAG+TGG | + | chr6.3:18539070-18539089 | MS.gene47245:CDS | 50.0% |
| !! | CCTTTGGCCTTGGCTTTGAT+AGG | - | chr6.3:18539133-18539152 | None:intergenic | 50.0% |
| !! | GAGTCTGGGATTTTGCAGGA+AGG | + | chr6.3:18537684-18537703 | MS.gene47245:CDS | 50.0% |
| AATTGGAACACCGTTGGCGC+CGG | - | chr6.3:18539846-18539865 | None:intergenic | 55.0% | |
| GCAAGGAGGTCATGAGAGTC+TGG | + | chr6.3:18537669-18537688 | MS.gene47245:CDS | 55.0% | |
| !! | CTTCTTACGAGGGGCACCTT+TGG | - | chr6.3:18539149-18539168 | None:intergenic | 55.0% |
| !! | ACGAGGGGCACCTTTGGCCT+TGG | - | chr6.3:18539143-18539162 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 18537124 | 18540243 | 18537124 | ID=MS.gene47245 |
| chr6.3 | mRNA | 18537124 | 18540243 | 18537124 | ID=MS.gene47245.t1;Parent=MS.gene47245 |
| chr6.3 | exon | 18537124 | 18537738 | 18537124 | ID=MS.gene47245.t1.exon1;Parent=MS.gene47245.t1 |
| chr6.3 | CDS | 18537124 | 18537738 | 18537124 | ID=cds.MS.gene47245.t1;Parent=MS.gene47245.t1 |
| chr6.3 | exon | 18538791 | 18539327 | 18538791 | ID=MS.gene47245.t1.exon2;Parent=MS.gene47245.t1 |
| chr6.3 | CDS | 18538791 | 18539327 | 18538791 | ID=cds.MS.gene47245.t1;Parent=MS.gene47245.t1 |
| chr6.3 | exon | 18539414 | 18539506 | 18539414 | ID=MS.gene47245.t1.exon3;Parent=MS.gene47245.t1 |
| chr6.3 | CDS | 18539414 | 18539506 | 18539414 | ID=cds.MS.gene47245.t1;Parent=MS.gene47245.t1 |
| chr6.3 | exon | 18539579 | 18539650 | 18539579 | ID=MS.gene47245.t1.exon4;Parent=MS.gene47245.t1 |
| chr6.3 | CDS | 18539579 | 18539650 | 18539579 | ID=cds.MS.gene47245.t1;Parent=MS.gene47245.t1 |
| chr6.3 | exon | 18539743 | 18540039 | 18539743 | ID=MS.gene47245.t1.exon5;Parent=MS.gene47245.t1 |
| chr6.3 | CDS | 18539743 | 18540039 | 18539743 | ID=cds.MS.gene47245.t1;Parent=MS.gene47245.t1 |
| chr6.3 | exon | 18540133 | 18540243 | 18540133 | ID=MS.gene47245.t1.exon6;Parent=MS.gene47245.t1 |
| chr6.3 | CDS | 18540133 | 18540243 | 18540133 | ID=cds.MS.gene47245.t1;Parent=MS.gene47245.t1 |
| Gene Sequence |
| Protein sequence |
