AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47258

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47258.t1 MTR_6g027360 86.909 275 35 1 15 288 34 308 6.12e-176 488
MS.gene47258.t1 MTR_6g027340 79.184 245 11 1 44 288 1 205 2.30e-136 384
MS.gene47258.t1 MTR_6g027370 62.300 313 77 8 16 288 36 347 8.74e-115 335
MS.gene47258.t1 MTR_7g086960 45.896 268 103 7 58 286 88 352 4.22e-55 182
MS.gene47258.t1 MTR_4g082040 51.299 154 69 3 58 206 104 256 3.89e-46 160
MS.gene47258.t1 MTR_5g041570 52.482 141 64 2 40 180 117 254 4.72e-46 160
MS.gene47258.t1 MTR_6g074860 36.017 236 138 3 58 286 3 232 1.92e-45 154
MS.gene47258.t1 MTR_3g089045 65.385 104 36 0 59 162 16 119 6.14e-45 154
MS.gene47258.t1 MTR_4g019370 53.465 101 47 0 59 159 38 138 2.72e-35 130
MS.gene47258.t1 MTR_5g082910 36.957 138 87 0 47 184 7 144 7.79e-31 117
MS.gene47258.t1 MTR_3g101290 46.535 101 54 0 59 159 37 137 6.88e-30 113
MS.gene47258.t1 MTR_3g463400 49.505 101 51 0 59 159 133 233 4.86e-29 115
MS.gene47258.t1 MTR_5g016510 38.400 125 77 0 59 183 5 129 1.50e-28 111
MS.gene47258.t1 MTR_4g094982 34.463 177 103 4 59 226 5 177 1.74e-27 107
MS.gene47258.t1 MTR_5g070020 48.515 101 52 0 59 159 122 222 3.04e-27 108
MS.gene47258.t1 MTR_5g049190 42.609 115 61 1 44 158 9 118 3.60e-27 106
MS.gene47258.t1 MTR_3g077650 47.525 101 53 0 59 159 181 281 1.45e-26 108
MS.gene47258.t1 MTR_6g015455 45.833 96 52 0 59 154 5 100 2.41e-26 108
MS.gene47258.t1 MTR_1g100667 47.222 108 54 2 55 159 9 116 3.70e-26 104
MS.gene47258.t1 MTR_4g105660 46.535 101 54 0 59 159 180 280 1.36e-25 105
MS.gene47258.t1 MTR_7g061330 49.474 95 48 0 59 153 113 207 2.96e-25 105
MS.gene47258.t1 MTR_7g461410 49.474 95 48 0 59 153 113 207 2.96e-25 105
MS.gene47258.t1 MTR_4g100720 48.039 102 50 2 58 156 14 115 3.41e-25 99.4
MS.gene47258.t1 MTR_7g061330 49.474 95 48 0 59 153 77 171 3.46e-25 105
MS.gene47258.t1 MTR_7g037260 44.660 103 56 1 59 161 145 246 5.27e-25 102
MS.gene47258.t1 MTR_7g451170 43.564 101 57 0 59 159 191 291 1.00e-24 102
MS.gene47258.t1 MTR_1g110460 44.340 106 58 1 59 163 28 133 1.11e-24 101
MS.gene47258.t1 MTR_3g110028 42.593 108 62 0 59 166 85 192 1.31e-24 103
MS.gene47258.t1 MTR_1g026870 42.593 108 62 0 59 166 85 192 1.67e-24 103
MS.gene47258.t1 MTR_1g026870 34.906 106 64 2 53 153 23 128 3.56e-15 76.3
MS.gene47258.t1 MTR_5g010020 45.918 98 52 1 56 152 11 108 1.76e-24 101
MS.gene47258.t1 MTR_6g055910 46.000 100 53 1 55 153 12 111 4.83e-24 99.0
MS.gene47258.t1 MTR_2g097910 41.964 112 62 2 59 168 22 132 5.79e-24 99.4
MS.gene47258.t1 MTR_8g098860 40.741 108 63 1 56 162 11 118 6.91e-24 99.0
MS.gene47258.t1 MTR_5g042030 43.103 116 64 2 59 172 9 124 1.26e-23 97.8
MS.gene47258.t1 MTR_2g064160 45.455 99 51 2 56 152 10 107 1.70e-23 97.8
MS.gene47258.t1 MTR_4g065017 40.517 116 68 1 49 163 9 124 1.81e-23 98.2
MS.gene47258.t1 MTR_4g088015 43.000 100 57 0 59 158 221 320 1.90e-23 99.4
MS.gene47258.t1 MTR_2g089620 38.776 147 79 3 59 194 14 160 1.99e-23 97.8
MS.gene47258.t1 MTR_3g052450 42.991 107 60 1 59 164 42 148 2.05e-23 100
MS.gene47258.t1 MTR_7g035075 46.316 95 50 1 59 152 16 110 2.29e-23 95.1
MS.gene47258.t1 MTR_2g089450 46.939 98 49 2 59 154 14 110 2.58e-23 96.3
MS.gene47258.t1 MTR_0008s0470 36.879 141 84 3 59 197 15 152 3.18e-23 96.7
MS.gene47258.t1 MTR_7g035350 33.533 167 93 3 53 201 219 385 3.43e-23 99.0
MS.gene47258.t1 MTR_2g089420 36.774 155 84 4 59 200 13 166 3.52e-23 99.0
MS.gene47258.t1 MTR_0008s0390 35.211 142 89 2 59 198 15 155 3.86e-23 96.3
MS.gene47258.t1 MTR_1g085040 42.453 106 58 2 59 162 14 118 4.25e-23 97.8
MS.gene47258.t1 MTR_3g074520 50.000 96 45 2 59 152 14 108 4.68e-23 97.4
MS.gene47258.t1 MTR_5g010650 44.211 95 53 0 59 153 110 204 5.28e-23 98.6
MS.gene47258.t1 MTR_3g011610 42.056 107 61 1 59 164 39 145 5.75e-23 98.6
MS.gene47258.t1 MTR_1g086530 39.640 111 64 2 59 167 35 144 6.00e-23 95.9
MS.gene47258.t1 MTR_3g052430 42.991 107 60 1 59 164 43 149 6.94e-23 98.6
MS.gene47258.t1 MTR_5g029840 45.361 97 52 1 59 154 14 110 7.55e-23 96.7
MS.gene47258.t1 MTR_2g011660 45.045 111 59 2 53 161 9 119 1.21e-22 96.3
MS.gene47258.t1 MTR_7g450950 40.179 112 67 0 45 156 143 254 1.35e-22 95.9
MS.gene47258.t1 MTR_1g100653 42.056 107 61 1 59 164 14 120 1.38e-22 95.1
MS.gene47258.t1 MTR_1g085640 41.905 105 60 1 59 162 14 118 1.56e-22 96.3
MS.gene47258.t1 MTR_0251s0050 41.071 112 62 3 59 167 15 125 1.90e-22 94.4
MS.gene47258.t1 MTR_2g099740 47.312 93 46 2 62 152 17 108 1.93e-22 96.3
MS.gene47258.t1 MTR_6g009430 41.584 101 58 1 55 154 10 110 2.32e-22 95.1
MS.gene47258.t1 MTR_8g017440 45.455 99 51 2 56 152 11 108 2.35e-22 95.1
MS.gene47258.t1 MTR_3g028740 39.344 122 72 2 39 159 5 125 2.48e-22 95.1
MS.gene47258.t1 MTR_6g006030 46.316 95 50 1 59 152 16 110 2.62e-22 92.4
MS.gene47258.t1 MTR_0063s0090 40.000 125 67 3 59 176 14 137 3.19e-22 92.8
MS.gene47258.t1 MTR_7g110830 40.952 105 61 1 59 162 14 118 3.50e-22 95.1
MS.gene47258.t1 MTR_7g115650 43.243 111 61 2 59 167 14 124 3.56e-22 92.0
MS.gene47258.t1 MTR_2g067420 44.330 97 53 1 59 154 16 112 3.98e-22 94.4
MS.gene47258.t1 MTR_1g017000 33.333 156 96 4 56 206 11 163 4.38e-22 92.8
MS.gene47258.t1 MTR_1g112760 45.000 100 52 2 56 153 12 110 4.38e-22 92.4
MS.gene47258.t1 MTR_7g037130 42.857 98 56 0 59 156 145 242 4.77e-22 94.7
MS.gene47258.t1 MTR_8g017540 38.060 134 68 3 56 187 57 177 5.17e-22 95.1
MS.gene47258.t1 MTR_0008s0280 42.308 104 57 2 52 153 7 109 5.33e-22 92.0
MS.gene47258.t1 MTR_3g461490 44.330 97 53 1 59 154 14 110 5.70e-22 94.0
MS.gene47258.t1 MTR_1g083630 39.669 121 69 3 44 163 1 118 6.34e-22 95.9
MS.gene47258.t1 MTR_5g079670 45.361 97 52 1 58 153 12 108 7.38e-22 91.3
MS.gene47258.t1 MTR_1g062940 41.667 108 55 3 49 154 3 104 8.30e-22 91.3
MS.gene47258.t1 MTR_4g063100 41.509 106 57 3 59 160 9 113 8.67e-22 92.0
MS.gene47258.t1 MTR_8g042410 42.056 107 61 1 59 164 39 145 8.93e-22 95.1
MS.gene47258.t1 MTR_4g091490 44.144 111 60 2 53 161 9 119 9.86e-22 94.0
MS.gene47258.t1 MTR_7g111290 46.809 94 47 2 59 150 14 106 1.21e-21 94.0
MS.gene47258.t1 MTR_5g014990 42.241 116 61 4 59 172 14 125 1.38e-21 92.8
MS.gene47258.t1 MTR_5g007370 46.939 98 49 2 59 154 14 110 1.70e-21 92.0
MS.gene47258.t1 MTR_1g086510 37.288 118 73 1 55 171 19 136 1.75e-21 91.7
MS.gene47258.t1 MTR_8g020490 44.792 96 52 1 58 152 9 104 1.77e-21 91.3
MS.gene47258.t1 MTR_4g125520 40.566 106 62 1 59 163 14 119 1.89e-21 92.4
MS.gene47258.t1 MTR_3g077110 45.455 99 51 2 56 152 11 108 1.92e-21 92.8
MS.gene47258.t1 MTR_5g062790 37.190 121 74 2 59 177 11 131 2.03e-21 92.0
MS.gene47258.t1 MTR_4g105130 43.878 98 54 1 56 152 11 108 2.30e-21 92.8
MS.gene47258.t1 MTR_8g027345 37.168 113 68 2 59 168 14 126 3.61e-21 91.3
MS.gene47258.t1 MTR_6g012690 41.379 116 66 2 59 172 14 129 6.11e-21 91.7
MS.gene47258.t1 MTR_6g012180 36.154 130 79 2 59 187 14 140 6.25e-21 90.9
MS.gene47258.t1 MTR_5g088610 37.190 121 74 2 59 177 11 131 7.82e-21 91.3
MS.gene47258.t1 MTR_8g017500 45.161 93 48 2 62 152 17 108 9.49e-21 90.9
MS.gene47258.t1 MTR_1g045610 43.750 96 51 2 59 152 23 117 9.51e-21 89.4
MS.gene47258.t1 MTR_1g057980 41.837 98 57 0 59 156 80 177 1.05e-20 90.1
MS.gene47258.t1 MTR_1g076150 46.316 95 48 2 62 154 17 110 1.11e-20 89.4
MS.gene47258.t1 MTR_0001s0360 44.330 97 53 1 59 154 9 105 1.11e-20 89.0
MS.gene47258.t1 MTR_4g097570 42.857 98 53 2 59 153 14 111 1.27e-20 89.7
MS.gene47258.t1 MTR_0247s0040 45.263 95 51 1 59 152 9 103 1.50e-20 87.0
MS.gene47258.t1 MTR_1g073170 40.816 98 55 2 59 154 22 118 1.63e-20 88.6
MS.gene47258.t1 MTR_3g065440 41.739 115 63 3 59 170 14 127 1.65e-20 89.7
MS.gene47258.t1 MTR_3g103570 42.857 98 54 2 59 154 14 111 1.82e-20 90.1
MS.gene47258.t1 MTR_8g017350 41.964 112 60 2 56 165 11 119 1.89e-20 91.7
MS.gene47258.t1 MTR_2g096380 42.708 96 52 2 59 152 8 102 1.98e-20 88.2
MS.gene47258.t1 MTR_7g010210 42.268 97 55 1 59 154 14 110 2.63e-20 89.4
MS.gene47258.t1 MTR_4g073420 42.268 97 55 1 59 154 14 110 2.68e-20 88.6
MS.gene47258.t1 MTR_4g478180 45.918 98 50 2 59 154 15 111 2.69e-20 89.7
MS.gene47258.t1 MTR_7g010210 42.268 97 55 1 59 154 14 110 2.86e-20 88.2
MS.gene47258.t1 MTR_7g076740 41.667 108 59 3 59 163 14 120 3.24e-20 89.0
MS.gene47258.t1 MTR_7g117730 41.489 94 54 1 62 154 17 110 3.93e-20 87.8
MS.gene47258.t1 MTR_8g017390 43.434 99 54 1 56 152 11 109 4.11e-20 90.1
MS.gene47258.t1 MTR_8g017340 41.071 112 61 2 56 165 11 119 4.39e-20 90.1
MS.gene47258.t1 MTR_5g079290 43.299 97 54 1 59 154 19 115 4.45e-20 87.8
MS.gene47258.t1 MTR_2g095520 43.878 98 53 2 59 154 14 111 4.49e-20 88.6
MS.gene47258.t1 MTR_5g088080 37.168 113 69 2 55 165 10 122 4.64e-20 87.8
MS.gene47258.t1 MTR_5g088150 37.168 113 69 2 55 165 10 122 4.64e-20 87.8
MS.gene47258.t1 MTR_5g488210 37.168 113 69 2 55 165 10 122 4.64e-20 87.8
MS.gene47258.t1 MTR_5g088640 37.168 113 69 2 55 165 10 122 4.79e-20 87.8
MS.gene47258.t1 MTR_1g017140 41.667 108 58 3 59 164 14 118 5.08e-20 89.0
MS.gene47258.t1 MTR_7g011170 39.024 123 71 3 59 178 14 135 5.89e-20 88.2
MS.gene47258.t1 MTR_5g078140 45.918 98 50 2 59 154 14 110 6.24e-20 88.2
MS.gene47258.t1 MTR_8g095390 40.625 96 56 1 59 153 14 109 6.35e-20 88.2
MS.gene47258.t1 MTR_8g031360 43.269 104 55 3 59 159 15 117 6.50e-20 87.8
MS.gene47258.t1 MTR_5g079220 42.268 97 55 1 59 154 23 119 7.59e-20 87.4
MS.gene47258.t1 MTR_5g488170 37.168 113 69 2 55 165 10 122 7.70e-20 86.7
MS.gene47258.t1 MTR_1g043080 42.157 102 58 1 59 159 14 115 8.25e-20 86.7
MS.gene47258.t1 MTR_1g043050 42.157 102 58 1 59 159 14 115 8.28e-20 86.7
MS.gene47258.t1 MTR_4g121460 34.058 138 77 2 59 195 14 138 9.84e-20 87.8
MS.gene47258.t1 MTR_8g060940 44.898 98 51 2 59 154 9 105 1.24e-19 85.9
MS.gene47258.t1 MTR_4g082230 40.517 116 67 2 59 172 14 129 1.27e-19 88.2
MS.gene47258.t1 MTR_4g097570 42.268 97 54 2 59 153 14 110 1.37e-19 87.0
MS.gene47258.t1 MTR_5g078910 42.268 97 55 1 59 154 9 105 1.97e-19 86.7
MS.gene47258.t1 MTR_4g485530 43.299 97 52 2 58 152 13 108 1.98e-19 84.3
MS.gene47258.t1 MTR_4g057635 43.000 100 55 2 55 152 10 109 2.01e-19 87.0
MS.gene47258.t1 MTR_2g034790 38.182 110 67 1 59 167 14 123 2.09e-19 87.0
MS.gene47258.t1 MTR_5g078800 42.268 97 55 1 59 154 9 105 2.30e-19 85.9
MS.gene47258.t1 MTR_5g078860 43.299 97 54 1 59 154 9 105 2.33e-19 86.3
MS.gene47258.t1 MTR_7g087130 35.821 134 84 2 59 191 14 146 2.42e-19 87.0
MS.gene47258.t1 MTR_7g096930 36.601 153 89 3 59 203 14 166 2.51e-19 85.9
MS.gene47258.t1 MTR_3g039990 42.268 97 55 1 59 154 15 111 2.72e-19 86.3
MS.gene47258.t1 MTR_8g006470 37.956 137 71 4 59 181 12 148 3.29e-19 85.9
MS.gene47258.t1 MTR_7g102110 42.857 98 54 2 59 154 14 111 3.40e-19 85.5
MS.gene47258.t1 MTR_2g088170 44.444 108 57 2 59 164 31 137 3.45e-19 87.4
MS.gene47258.t1 MTR_3g097450 38.835 103 62 1 58 159 13 115 4.70e-19 85.5
MS.gene47258.t1 MTR_2g033170 38.596 114 69 1 59 171 26 139 5.08e-19 85.9
MS.gene47258.t1 MTR_4g128670 41.837 98 55 2 59 154 14 111 5.16e-19 85.9
MS.gene47258.t1 MTR_0140s0030 41.176 102 59 1 59 159 15 116 6.21e-19 85.5
MS.gene47258.t1 MTR_0489s0020 41.176 102 59 1 59 159 15 116 6.21e-19 85.5
MS.gene47258.t1 MTR_5g078950 40.777 103 59 2 54 154 3 105 6.48e-19 84.3
MS.gene47258.t1 MTR_3g083540 40.206 97 57 1 59 154 43 139 7.96e-19 84.7
MS.gene47258.t1 MTR_4g082290 40.517 116 67 2 59 172 14 129 9.68e-19 85.9
MS.gene47258.t1 MTR_4g102380 42.857 98 53 2 59 154 14 110 1.12e-18 84.0
MS.gene47258.t1 MTR_6g055910 54.839 62 28 0 92 153 21 82 1.26e-18 83.6
MS.gene47258.t1 MTR_7g061550 35.965 114 70 1 59 169 7 120 1.28e-18 85.1
MS.gene47258.t1 MTR_0193s0090 42.268 97 55 1 59 154 9 105 1.60e-18 82.0
MS.gene47258.t1 MTR_0197s0010 44.211 95 50 2 62 154 6 99 1.64e-18 82.8
MS.gene47258.t1 MTR_7g017260 38.983 118 66 3 45 156 12 129 1.92e-18 83.6
MS.gene47258.t1 MTR_6g090405 42.308 104 54 3 55 154 10 111 2.88e-18 82.4
MS.gene47258.t1 MTR_4g029540 40.000 105 61 2 59 161 12 116 4.81e-18 82.8
MS.gene47258.t1 MTR_5g079120 37.391 115 69 2 59 172 63 175 5.11e-18 82.8
MS.gene47258.t1 MTR_4g123040 38.596 114 69 1 59 171 26 139 6.97e-18 82.4
MS.gene47258.t1 MTR_5g078930 34.058 138 81 2 59 186 11 148 9.94e-18 80.5
MS.gene47258.t1 MTR_1g021230 38.462 104 63 1 59 161 59 162 1.04e-17 83.2
MS.gene47258.t1 MTR_4g063100 46.479 71 36 1 92 160 14 84 5.75e-17 78.2
MS.gene47258.t1 MTR_3g045430 33.010 103 68 1 53 154 9 111 1.63e-16 78.2
MS.gene47258.t1 MTR_8g468380 31.304 115 78 1 62 176 25 138 1.82e-16 79.3
MS.gene47258.t1 MTR_5g038910 32.456 114 75 1 62 175 29 140 2.21e-16 79.3
MS.gene47258.t1 MTR_5g038910 32.456 114 75 1 62 175 29 140 3.01e-16 78.6
MS.gene47258.t1 MTR_7g111290 52.542 59 28 0 92 150 6 64 6.28e-16 77.0
MS.gene47258.t1 MTR_2g096380 49.180 61 31 0 92 152 23 83 6.73e-16 75.1
MS.gene47258.t1 MTR_7g109320 38.235 102 62 1 59 159 14 115 4.29e-14 72.0
MS.gene47258.t1 MTR_5g007300 45.333 75 40 1 59 132 66 140 8.98e-14 67.4
MS.gene47258.t1 MTR_1g008970 46.154 65 35 0 85 149 117 181 1.31e-13 69.3
MS.gene47258.t1 MTR_1g085880 39.623 106 62 2 62 165 17 122 3.08e-13 67.4
MS.gene47258.t1 MTR_6g080360 34.409 93 60 1 60 152 480 571 5.33e-13 69.7
MS.gene47258.t1 MTR_1g085770 39.623 106 62 2 62 165 17 122 8.30e-13 67.8
MS.gene47258.t1 MTR_6g080360 34.409 93 60 1 60 152 260 351 8.49e-13 68.9
MS.gene47258.t1 MTR_4g128190 37.931 87 52 2 92 177 34 119 9.50e-13 67.0
MS.gene47258.t1 MTR_7g035300 46.875 64 33 1 93 156 99 161 3.31e-11 62.4
MS.gene47258.t1 MTR_7g115550 36.957 92 57 1 62 153 10 100 3.69e-11 63.9
MS.gene47258.t1 MTR_7g115550 36.957 92 57 1 62 153 10 100 4.37e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47258.t1 AT1G69560 34.317 271 120 4 42 286 90 328 3.66e-48 163
MS.gene47258.t1 AT1G69560 38.889 252 134 4 42 286 106 344 4.86e-48 163
MS.gene47258.t1 AT4G33450 38.272 243 137 6 52 286 10 247 6.08e-48 160
MS.gene47258.t1 AT1G26780 56.349 126 54 1 59 184 98 222 1.02e-44 153
MS.gene47258.t1 AT1G26780 56.349 126 54 1 59 184 98 222 3.30e-44 154
MS.gene47258.t1 AT1G17950 60.952 105 41 0 58 162 4 108 5.10e-44 150
MS.gene47258.t1 AT5G17800 36.861 274 119 9 41 286 74 321 4.02e-42 147
MS.gene47258.t1 AT3G29020 56.637 113 49 0 58 170 64 176 4.72e-41 142
MS.gene47258.t1 AT1G73410 36.434 258 116 6 58 288 5 241 5.74e-41 142
MS.gene47258.t1 AT3G29020 56.637 113 49 0 58 170 66 178 4.14e-40 142
MS.gene47258.t1 AT1G73410 60.952 105 41 0 58 162 5 109 5.92e-40 138
MS.gene47258.t1 AT3G55730 41.611 149 79 1 59 207 56 196 8.97e-32 122
MS.gene47258.t1 AT5G39700 50.000 110 55 0 60 169 57 166 7.67e-30 112
MS.gene47258.t1 AT2G39880 43.182 132 60 2 47 178 42 158 6.76e-29 113
MS.gene47258.t1 AT5G67300 45.545 101 55 0 59 159 6 106 1.55e-28 111
MS.gene47258.t1 AT4G37260 43.925 107 60 0 53 159 7 113 9.15e-28 109
MS.gene47258.t1 AT3G09230 47.525 101 53 0 59 159 55 155 1.07e-27 110
MS.gene47258.t1 AT2G25230 45.098 102 56 0 59 160 26 127 2.73e-27 106
MS.gene47258.t1 AT5G11050 48.515 101 52 0 59 159 105 205 9.31e-27 108
MS.gene47258.t1 AT5G58850 48.515 101 52 0 59 159 105 205 2.15e-26 107
MS.gene47258.t1 AT5G40360 44.000 100 56 0 59 158 158 257 2.26e-26 106
MS.gene47258.t1 AT3G50060 42.574 101 58 0 59 159 6 106 2.75e-26 105
MS.gene47258.t1 AT2G23290 43.564 101 57 0 59 159 13 113 9.76e-26 103
MS.gene47258.t1 AT3G27785 45.098 102 56 0 59 160 189 290 2.17e-25 105
MS.gene47258.t1 AT4G18770 46.535 101 54 0 59 159 217 317 3.01e-25 104
MS.gene47258.t1 AT5G11510 42.593 108 62 0 59 166 81 188 5.17e-25 105
MS.gene47258.t1 AT5G11510 42.593 108 62 0 59 166 81 188 5.17e-25 105
MS.gene47258.t1 AT5G11510 42.593 108 62 0 59 166 81 188 5.17e-25 105
MS.gene47258.t1 AT3G53200 44.554 101 53 2 62 160 14 113 6.49e-25 100
MS.gene47258.t1 AT5G11510 42.593 108 62 0 59 166 81 188 7.19e-25 104
MS.gene47258.t1 AT5G11510 42.593 108 62 0 59 166 81 188 7.95e-25 104
MS.gene47258.t1 AT1G63910 46.939 98 51 1 56 152 11 108 8.19e-25 102
MS.gene47258.t1 AT3G11440 42.991 107 60 1 59 164 43 149 1.26e-24 103
MS.gene47258.t1 AT3G11440 42.991 107 60 1 59 164 43 149 1.26e-24 103
MS.gene47258.t1 AT3G11440 42.991 107 60 1 59 164 43 149 1.26e-24 103
MS.gene47258.t1 AT3G11440 42.991 107 60 1 59 164 43 149 1.37e-24 103
MS.gene47258.t1 AT2G47190 41.818 110 63 1 59 167 22 131 1.57e-24 100
MS.gene47258.t1 AT3G48920 46.465 99 52 1 56 153 17 115 3.00e-24 99.0
MS.gene47258.t1 AT2G26950 43.119 109 50 3 58 161 17 118 4.07e-24 100
MS.gene47258.t1 AT3G09370 47.368 95 50 0 59 153 135 229 5.55e-24 101
MS.gene47258.t1 AT3G12720 45.455 99 51 2 56 152 21 118 5.92e-24 99.0
MS.gene47258.t1 AT3G09370 47.368 95 50 0 59 153 130 224 6.04e-24 101
MS.gene47258.t1 AT1G18570 39.041 146 69 4 59 195 15 149 6.16e-24 99.8
MS.gene47258.t1 AT3G09370 47.368 95 50 0 59 153 143 237 6.62e-24 101
MS.gene47258.t1 AT4G28110 43.103 116 64 2 59 172 14 129 6.89e-24 98.6
MS.gene47258.t1 AT5G02320 46.316 95 51 0 59 153 67 161 7.31e-24 101
MS.gene47258.t1 AT5G02320 46.316 95 51 0 59 153 127 221 7.39e-24 101
MS.gene47258.t1 AT5G02320 46.316 95 51 0 59 153 127 221 7.39e-24 101
MS.gene47258.t1 AT4G25560 46.875 96 50 1 59 153 12 107 7.61e-24 98.2
MS.gene47258.t1 AT4G05100 47.059 102 53 1 59 159 15 116 8.58e-24 99.0
MS.gene47258.t1 AT5G54230 47.619 105 53 2 59 161 14 118 1.28e-23 98.6
MS.gene47258.t1 AT5G14750 41.509 106 61 1 50 154 9 114 1.63e-23 95.5
MS.gene47258.t1 AT5G06100 43.269 104 58 1 59 161 34 137 1.64e-23 99.8
MS.gene47258.t1 AT5G07700 46.078 102 54 1 59 159 14 115 1.70e-23 98.6
MS.gene47258.t1 AT5G07700 46.078 102 54 1 59 159 14 115 1.70e-23 98.6
MS.gene47258.t1 AT5G06100 42.991 107 60 1 59 164 34 140 1.83e-23 100
MS.gene47258.t1 AT5G06100 42.991 107 60 1 59 164 34 140 1.83e-23 100
MS.gene47258.t1 AT5G06100 42.991 107 60 1 59 164 34 140 1.83e-23 100
MS.gene47258.t1 AT5G06100 42.991 107 60 1 59 164 34 140 1.83e-23 100
MS.gene47258.t1 AT5G61420 42.105 114 64 2 59 170 14 127 2.58e-23 98.2
MS.gene47258.t1 AT1G79180 44.860 107 56 2 55 159 12 117 2.60e-23 97.1
MS.gene47258.t1 AT3G27810 39.231 130 76 2 59 185 22 151 3.07e-23 95.5
MS.gene47258.t1 AT3G23250 44.118 102 56 1 59 159 14 115 3.62e-23 96.7
MS.gene47258.t1 AT5G12870 38.532 109 66 1 56 163 17 125 3.83e-23 96.3
MS.gene47258.t1 AT5G60890 42.105 114 64 2 59 170 14 127 4.18e-23 96.7
MS.gene47258.t1 AT5G40350 36.000 150 87 4 59 202 19 165 5.49e-23 94.4
MS.gene47258.t1 AT1G48000 46.739 92 48 1 62 152 37 128 6.26e-23 95.1
MS.gene47258.t1 AT3G08500 40.351 114 67 1 49 161 22 135 7.27e-23 96.7
MS.gene47258.t1 AT5G65230 51.042 96 44 2 59 152 14 108 8.43e-23 95.9
MS.gene47258.t1 AT1G57560 35.915 142 73 3 59 183 14 154 9.07e-23 95.1
MS.gene47258.t1 AT3G02940 48.421 95 48 1 59 152 14 108 1.00e-22 95.9
MS.gene47258.t1 AT5G40430 39.286 112 67 1 58 169 53 163 1.05e-22 94.7
MS.gene47258.t1 AT5G52600 43.299 97 54 1 59 154 14 110 1.16e-22 93.2
MS.gene47258.t1 AT3G01530 46.316 95 50 1 59 152 27 121 1.17e-22 93.6
MS.gene47258.t1 AT5G40330 34.694 147 89 2 52 191 1 147 1.24e-22 93.6
MS.gene47258.t1 AT3G30210 38.843 121 67 3 59 172 29 149 1.25e-22 95.1
MS.gene47258.t1 AT3G02940 48.421 95 48 1 59 152 14 108 1.35e-22 95.5
MS.gene47258.t1 AT3G02940 48.421 95 48 1 59 152 14 108 1.35e-22 95.5
MS.gene47258.t1 AT4G17785 46.939 98 49 2 59 154 15 111 1.39e-22 96.3
MS.gene47258.t1 AT4G17785 46.939 98 49 2 59 154 15 111 1.52e-22 96.3
MS.gene47258.t1 AT4G01680 33.784 148 86 2 56 202 11 147 1.63e-22 94.0
MS.gene47258.t1 AT3G01140 41.379 116 66 2 59 172 14 129 1.82e-22 95.9
MS.gene47258.t1 AT1G57560 40.870 115 64 3 59 170 14 127 1.93e-22 95.1
MS.gene47258.t1 AT2G32460 42.857 105 57 2 59 161 20 123 1.93e-22 97.1
MS.gene47258.t1 AT4G26930 40.187 107 63 1 59 164 21 127 2.05e-22 96.3
MS.gene47258.t1 AT2G32460 42.857 105 57 2 59 161 8 111 2.29e-22 96.7
MS.gene47258.t1 AT5G26660 36.429 140 85 3 56 192 11 149 2.49e-22 95.5
MS.gene47258.t1 AT3G01140 41.379 116 66 2 59 172 57 172 2.54e-22 95.9
MS.gene47258.t1 AT5G07690 45.361 97 52 1 59 154 14 110 2.55e-22 95.1
MS.gene47258.t1 AT1G25340 40.336 119 70 1 46 163 7 125 2.85e-22 94.0
MS.gene47258.t1 AT1G25340 39.831 118 67 1 46 163 7 120 3.09e-22 94.0
MS.gene47258.t1 AT5G52260 48.544 103 50 2 59 159 14 115 3.53e-22 93.6
MS.gene47258.t1 AT5G15310 41.379 116 66 2 59 172 14 129 4.00e-22 94.4
MS.gene47258.t1 AT5G15310 41.379 116 66 2 59 172 14 129 4.30e-22 94.4
MS.gene47258.t1 AT1G09540 43.119 109 57 3 59 163 14 121 4.42e-22 94.7
MS.gene47258.t1 AT1G25340 39.831 118 67 1 46 163 7 120 4.80e-22 94.0
MS.gene47258.t1 AT4G01680 33.784 148 86 2 56 202 11 147 5.36e-22 94.4
MS.gene47258.t1 AT3G28470 44.211 95 52 1 59 152 14 108 5.57e-22 94.0
MS.gene47258.t1 AT4G21440 47.423 97 50 1 59 154 14 110 5.74e-22 94.4
MS.gene47258.t1 AT1G74430 44.118 102 56 1 59 159 14 115 6.13e-22 92.8
MS.gene47258.t1 AT5G35550 41.818 110 63 1 44 152 1 110 7.03e-22 92.4
MS.gene47258.t1 AT4G32730 42.105 95 55 0 59 153 87 181 7.73e-22 95.9
MS.gene47258.t1 AT4G32730 42.105 95 55 0 59 153 87 181 7.73e-22 95.9
MS.gene47258.t1 AT4G32730 42.105 95 55 0 59 153 87 181 7.73e-22 95.9
MS.gene47258.t1 AT4G32730 42.105 95 55 0 59 153 87 181 7.73e-22 95.9
MS.gene47258.t1 AT4G32730 42.105 95 55 0 59 153 87 181 8.02e-22 95.9
MS.gene47258.t1 AT5G10280 45.918 98 50 2 59 154 14 110 1.10e-21 93.2
MS.gene47258.t1 AT3G53200 52.174 69 33 0 92 160 12 80 1.12e-21 90.9
MS.gene47258.t1 AT1G68320 42.308 104 57 2 62 163 24 126 1.24e-21 92.4
MS.gene47258.t1 AT1G16490 43.396 106 59 1 55 159 12 117 1.30e-21 92.0
MS.gene47258.t1 AT4G00540 40.179 112 64 1 59 167 103 214 1.31e-21 94.0
MS.gene47258.t1 AT5G15310 41.379 116 66 2 59 172 14 129 1.50e-21 91.3
MS.gene47258.t1 AT3G27920 33.835 133 87 1 54 185 11 143 1.52e-21 90.9
MS.gene47258.t1 AT3G13890 44.565 92 50 1 62 152 17 108 1.57e-21 93.2
MS.gene47258.t1 AT4G00540 40.179 112 64 1 59 167 101 212 1.88e-21 94.0
MS.gene47258.t1 AT1G74080 43.137 102 55 2 59 157 14 115 2.91e-21 92.0
MS.gene47258.t1 AT1G18710 42.453 106 59 2 59 162 14 119 3.43e-21 90.9
MS.gene47258.t1 AT1G34670 47.368 95 49 1 59 152 14 108 3.88e-21 92.4
MS.gene47258.t1 AT3G61250 43.689 103 55 2 59 159 14 115 4.55e-21 91.3
MS.gene47258.t1 AT1G66230 45.283 106 53 3 59 160 14 118 5.49e-21 90.5
MS.gene47258.t1 AT3G12820 41.748 103 57 2 59 159 16 117 5.81e-21 89.7
MS.gene47258.t1 AT1G35515 40.196 102 60 1 59 159 14 115 7.61e-21 88.6
MS.gene47258.t1 AT5G23000 43.269 104 53 3 55 154 10 111 1.09e-20 90.5
MS.gene47258.t1 AT1G22640 43.243 111 53 4 59 165 14 118 1.14e-20 89.4
MS.gene47258.t1 AT4G38620 42.268 97 55 1 59 154 14 110 1.21e-20 89.7
MS.gene47258.t1 AT5G65790 42.609 115 60 4 59 171 14 124 1.27e-20 90.9
MS.gene47258.t1 AT3G13890 41.584 101 49 2 62 152 17 117 1.34e-20 90.9
MS.gene47258.t1 AT4G01680 32.500 160 84 3 56 202 11 159 1.38e-20 90.5
MS.gene47258.t1 AT5G16770 45.361 97 52 1 59 154 14 110 1.43e-20 90.1
MS.gene47258.t1 AT5G16770 45.361 97 52 1 59 154 14 110 1.43e-20 90.1
MS.gene47258.t1 AT1G56160 42.453 106 58 2 56 159 13 117 1.70e-20 89.4
MS.gene47258.t1 AT5G56110 43.158 95 53 1 59 152 14 108 1.74e-20 89.7
MS.gene47258.t1 AT5G16770 45.361 97 52 1 59 154 14 110 1.87e-20 90.1
MS.gene47258.t1 AT5G16770 45.361 97 52 1 59 154 14 110 1.87e-20 90.1
MS.gene47258.t1 AT3G49690 42.609 115 60 3 59 171 14 124 2.12e-20 89.4
MS.gene47258.t1 AT4G09460 39.815 108 61 2 59 165 14 118 2.16e-20 88.2
MS.gene47258.t1 AT2G26960 40.952 105 61 1 58 161 21 125 3.78e-20 90.1
MS.gene47258.t1 AT2G16720 41.441 111 55 4 59 165 14 118 3.92e-20 87.8
MS.gene47258.t1 AT5G55020 39.252 107 64 1 59 164 28 134 4.03e-20 90.5
MS.gene47258.t1 AT5G62470 41.667 96 56 0 59 154 14 109 4.57e-20 89.0
MS.gene47258.t1 AT4G34990 42.268 97 55 1 59 154 14 110 5.15e-20 87.8
MS.gene47258.t1 AT5G59780 38.679 106 62 2 59 162 10 114 5.58e-20 87.0
MS.gene47258.t1 AT3G47600 43.299 97 54 1 59 154 14 110 5.60e-20 88.6
MS.gene47258.t1 AT5G57620 43.878 98 53 2 59 154 14 111 5.82e-20 88.6
MS.gene47258.t1 AT4G13480 42.708 96 52 2 59 152 8 102 6.06e-20 87.4
MS.gene47258.t1 AT3G24310 43.750 96 51 2 59 152 20 114 6.18e-20 87.4
MS.gene47258.t1 AT3G46130 39.623 106 61 2 59 162 11 115 8.22e-20 87.0
MS.gene47258.t1 AT5G49620 40.909 110 64 1 59 167 28 137 8.44e-20 87.8
MS.gene47258.t1 AT1G06180 43.689 103 55 2 59 159 14 115 1.29e-19 86.3
MS.gene47258.t1 AT4G12350 43.119 109 57 3 59 163 14 121 1.31e-19 87.0
MS.gene47258.t1 AT5G14340 40.385 104 59 2 62 163 29 131 1.51e-19 86.7
MS.gene47258.t1 AT5G16600 42.056 107 59 2 59 163 14 119 1.54e-19 87.4
MS.gene47258.t1 AT3G13540 40.206 97 57 1 59 154 25 121 1.98e-19 85.5
MS.gene47258.t1 AT1G79180 35.252 139 56 2 55 159 12 150 2.22e-19 87.0
MS.gene47258.t1 AT1G08810 43.299 97 54 1 59 154 14 110 2.85e-19 85.9
MS.gene47258.t1 AT1G74650 43.299 97 54 1 59 154 14 110 3.19e-19 86.7
MS.gene47258.t1 AT4G37780 40.367 109 60 3 59 165 14 119 3.97e-19 85.9
MS.gene47258.t1 AT2G47460 35.246 122 74 2 59 179 14 131 4.14e-19 86.7
MS.gene47258.t1 AT3G62610 39.216 102 61 1 59 159 14 115 4.40e-19 86.3
MS.gene47258.t1 AT5G49330 38.235 102 62 1 59 159 14 115 5.05e-19 85.9
MS.gene47258.t1 AT2G31180 41.346 104 59 2 62 163 17 120 8.00e-19 84.0
MS.gene47258.t1 AT4G22680 44.898 98 51 2 59 154 14 110 8.18e-19 84.3
MS.gene47258.t1 AT3G28910 42.268 97 55 1 59 154 14 110 9.65e-19 85.1
MS.gene47258.t1 AT1G66370 40.000 105 62 1 59 162 10 114 1.05e-18 83.6
MS.gene47258.t1 AT3G60460 41.121 107 61 2 59 163 13 119 1.08e-18 84.7
MS.gene47258.t1 AT5G62470 41.237 97 56 1 59 154 14 110 1.52e-18 84.7
MS.gene47258.t1 AT3G27810 40.625 96 55 1 92 185 7 102 3.80e-18 80.5
MS.gene47258.t1 AT3G06490 38.739 111 65 2 59 167 21 130 5.26e-18 82.8
MS.gene47258.t1 AT5G14750 50.000 62 31 0 92 153 18 79 8.68e-18 79.3
MS.gene47258.t1 AT5G40350 36.207 116 66 3 92 202 8 120 9.62e-18 79.3
MS.gene47258.t1 AT2G36890 38.532 109 62 3 62 168 17 122 1.32e-17 81.6
MS.gene47258.t1 AT2G36890 38.532 109 62 3 62 168 58 163 1.91e-17 81.6
MS.gene47258.t1 AT3G12820 50.000 68 34 0 92 159 2 69 2.10e-17 79.0
MS.gene47258.t1 AT5G59780 45.070 71 39 0 92 162 23 93 4.93e-17 78.2
MS.gene47258.t1 AT5G35550 54.839 62 28 0 92 153 53 114 6.45e-17 79.0
MS.gene47258.t1 AT3G46130 45.070 71 39 0 92 162 23 93 9.68e-17 78.2
MS.gene47258.t1 AT5G26660 40.230 87 51 1 92 177 17 103 9.83e-17 79.3
MS.gene47258.t1 AT2G02820 36.000 100 64 0 62 161 33 132 1.05e-16 79.3
MS.gene47258.t1 AT3G46130 45.070 71 39 0 92 162 13 83 1.12e-16 77.8
MS.gene47258.t1 AT2G37630 33.117 154 84 3 59 209 4 141 1.28e-16 79.3
MS.gene47258.t1 AT2G02820 36.000 100 64 0 62 161 33 132 1.85e-16 79.3
MS.gene47258.t1 AT2G02820 36.000 100 64 0 62 161 33 132 1.86e-16 79.7
MS.gene47258.t1 AT5G49620 36.290 124 64 2 59 167 28 151 2.50e-16 78.2
MS.gene47258.t1 AT1G56650 37.857 140 80 3 59 197 10 143 2.90e-16 77.0
MS.gene47258.t1 AT1G14350 35.000 100 65 0 62 161 28 127 3.17e-16 78.6
MS.gene47258.t1 AT1G14350 35.000 100 65 0 62 161 28 127 3.17e-16 78.6
MS.gene47258.t1 AT1G66380 43.299 97 54 1 59 154 10 106 1.22e-15 72.8
MS.gene47258.t1 AT5G62320 37.500 104 55 3 59 153 15 117 3.25e-15 73.9
MS.gene47258.t1 AT3G18100 37.500 88 55 0 59 146 546 633 3.22e-14 73.2
MS.gene47258.t1 AT3G18100 37.500 88 55 0 59 146 498 585 3.78e-14 73.2
MS.gene47258.t1 AT3G47600 49.206 63 32 0 92 154 42 104 4.75e-14 71.6
MS.gene47258.t1 AT3G18100 37.500 88 55 0 59 146 333 420 4.88e-14 72.4
MS.gene47258.t1 AT3G18100 37.500 88 55 0 59 146 385 472 5.04e-14 72.4
MS.gene47258.t1 AT1G66390 43.299 97 54 1 59 154 10 106 5.47e-14 70.5
MS.gene47258.t1 AT1G66380 53.226 62 29 0 92 153 11 72 3.15e-11 59.7
MS.gene47258.t1 AT1G09770 36.170 94 59 1 62 155 10 102 7.60e-11 63.2

Find 61 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCTTCCTCCTTACTTAA+AGG 0.144161 6.3:-18716049 None:intergenic
CGAAATCCCAAAGGGTGTTT+TGG 0.278766 6.3:-18715506 None:intergenic
TTGATGAGTGAGATATCATT+TGG 0.309155 6.3:-18715083 None:intergenic
TTGCAGCTTCATACACTTCA+TGG 0.319080 6.3:+18716079 MS.gene47258:CDS
CACATTTGCAAACACTTTCC+TGG 0.324885 6.3:+18716115 MS.gene47258:CDS
TCTCATAGCACTGCAAGTTT+TGG 0.326446 6.3:-18716646 None:intergenic
TGAGTTTGAATCTGAATGAT+TGG 0.332521 6.3:-18716718 None:intergenic
AGTGCATTGTCTGTCCTTCC+AGG 0.355828 6.3:-18716133 None:intergenic
CAGGGAAAAGCTGTAGATTA+AGG 0.362895 6.3:+18715990 MS.gene47258:intron
GCCTTTACCTAGTTATCAAA+TGG 0.371964 6.3:+18716300 MS.gene47258:CDS
AGATGGTTTCCAATGAGCTT+TGG 0.402226 6.3:-18715602 None:intergenic
GAAAAGTCCAAAACACCCTT+TGG 0.403018 6.3:+18715499 MS.gene47258:CDS
AGGCCTAGTGAGGTTGAGAT+TGG 0.413476 6.3:-18716281 None:intergenic
TTTGCAAATGTGTGCCCATT+TGG 0.423551 6.3:-18716104 None:intergenic
CTTTGGGATTTCGAACCCTC+TGG 0.427781 6.3:+18715516 MS.gene47258:CDS
TGACCATGCTCTCATTAGGT+TGG 0.427843 6.3:-18715543 None:intergenic
CTAAGCCTTCCAAAGCTCAT+TGG 0.430105 6.3:+18715593 MS.gene47258:CDS
ACTATCATCTATTGCAAGAA+AGG 0.451301 6.3:+18716201 MS.gene47258:CDS
CTGAGTCAGCTGCAACAAAC+AGG 0.456378 6.3:+18716754 MS.gene47258:CDS
TTGAGATTGGATTCATCAAT+GGG 0.459066 6.3:-18716268 None:intergenic
AACATTGCTGAACAACTAGA+AGG 0.460555 6.3:+18715679 MS.gene47258:CDS
GTTGAGATTGGATTCATCAA+TGG 0.467181 6.3:-18716269 None:intergenic
ACCTTTAAGTAAGGAGGAAG+AGG 0.467640 6.3:+18716048 MS.gene47258:CDS
ATACACTTCATGGTACCAAA+TGG 0.473150 6.3:+18716089 MS.gene47258:CDS
AAAAGTCCAAAACACCCTTT+GGG 0.480946 6.3:+18715500 MS.gene47258:CDS
CAAAAGAGAACCTTTAAGTA+AGG 0.489348 6.3:+18716039 MS.gene47258:CDS
TTTGAGGGACAGTGAAAATG+TGG 0.489859 6.3:+18716791 MS.gene47258:CDS
AGTATACCCATTTGATAACT+AGG 0.491035 6.3:-18716307 None:intergenic
GAACAACTAGAAGGAAGAAC+AGG 0.493534 6.3:+18715688 MS.gene47258:CDS
TCTTGGAGTAGGTGATACAT+AGG 0.495278 6.3:+18716845 MS.gene47258:CDS
AAATCATTATCATGTGATCA+AGG 0.497071 6.3:+18716159 MS.gene47258:CDS
CCTTTACCTAGTTATCAAAT+GGG 0.499079 6.3:+18716301 MS.gene47258:CDS
GCTTGACAATGTGAACCAAA+TGG 0.505439 6.3:+18716671 MS.gene47258:CDS
CCCATTTGATAACTAGGTAA+AGG 0.515252 6.3:-18716301 None:intergenic
TACACTTCATGGTACCAAAT+GGG 0.518845 6.3:+18716090 MS.gene47258:CDS
TGATCAAGGCTAGGAGGCAA+AGG 0.526772 6.3:+18716173 MS.gene47258:CDS
TTGAATCTGAATGATTGGAT+TGG 0.533488 6.3:-18716713 None:intergenic
TGATGAGTGAGATATCATTT+GGG 0.541744 6.3:-18715082 None:intergenic
AATCCAATCTCAACCTCACT+AGG 0.546026 6.3:+18716278 MS.gene47258:CDS
AAACAACTTATCGCTGATCA+TGG 0.546186 6.3:+18715640 MS.gene47258:CDS
ACTCCCCTTCAGGGTCATGT+TGG 0.552989 6.3:+18715463 MS.gene47258:intron
TTGAGGGACAGTGAAAATGT+GGG 0.555649 6.3:+18716792 MS.gene47258:CDS
CTTGGAGTAGGTGATACATA+GGG 0.561107 6.3:+18716846 MS.gene47258:CDS
TTCATCAATGGGACTTGTGA+TGG 0.566032 6.3:-18716257 None:intergenic
TTTGCAAACACTTTCCTGGA+AGG 0.569534 6.3:+18716119 MS.gene47258:CDS
GGTTTCCAATGAGCTTTGGA+AGG 0.572161 6.3:-18715598 None:intergenic
CATTCAGATTCAAACTCAGA+AGG 0.574102 6.3:+18716723 MS.gene47258:CDS
AAGAGAACCTTTAAGTAAGG+AGG 0.579559 6.3:+18716042 MS.gene47258:CDS
TTAAGCTTAGCATCTTCAGA+TGG 0.584279 6.3:-18715619 None:intergenic
ATTATCATGTGATCAAGGCT+AGG 0.595859 6.3:+18716164 MS.gene47258:CDS
GATCAAGGCTAGGAGGCAAA+GGG 0.603015 6.3:+18716174 MS.gene47258:CDS
AGAGGGTTCGAAATCCCAAA+GGG 0.606228 6.3:-18715514 None:intergenic
GATCCAACCTAATGAGAGCA+TGG 0.615775 6.3:+18715540 MS.gene47258:CDS
CATTAGGTTGGATCACCAGA+GGG 0.616427 6.3:-18715531 None:intergenic
GCTGCAACAAACAGGAACAA+TGG 0.622569 6.3:+18716762 MS.gene47258:CDS
TCATTAGGTTGGATCACCAG+AGG 0.632806 6.3:-18715532 None:intergenic
ATCATGTGATCAAGGCTAGG+AGG 0.646731 6.3:+18716167 MS.gene47258:CDS
CAGAGGGTTCGAAATCCCAA+AGG 0.650052 6.3:-18715515 None:intergenic
AACTAGGTAAAGGCCTAGTG+AGG 0.660873 6.3:-18716291 None:intergenic
GGAAAAGCTGTAGATTAAGG+TGG 0.661757 6.3:+18715993 MS.gene47258:CDS
GGGTCATGTTGGTAACAATG+AGG 0.688477 6.3:+18715474 MS.gene47258:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTTTTTGTGATAA+TGG + chr6.3:18715961-18715980 MS.gene47258:intron 10.0%
!!! TTTTATTGTGTTATATATTT+AGG + chr6.3:18716588-18716607 MS.gene47258:intron 10.0%
!!! AAAATTTTCAAGCAATTTAA+AGG - chr6.3:18716475-18716494 None:intergenic 15.0%
!! AAATAAGCAAGTAAAAAAGA+AGG - chr6.3:18715277-18715296 None:intergenic 20.0%
!! AACTTAAGTAAAGAGAAAAA+CGG - chr6.3:18715140-18715159 None:intergenic 20.0%
!! CAATAAAAAAATCAACAACA+TGG - chr6.3:18716576-18716595 None:intergenic 20.0%
!!! AAAAATTGAACATTTTCAAG+CGG + chr6.3:18715850-18715869 MS.gene47258:intron 20.0%
! AAATCATTATCATGTGATCA+AGG + chr6.3:18716159-18716178 MS.gene47258:CDS 25.0%
! AACTTGAAAAATGATGGTTA+TGG + chr6.3:18715385-18715404 MS.gene47258:intron 25.0%
! ATCTTTGATTGATGTTGTAT+CGG + chr6.3:18716421-18716440 MS.gene47258:intron 25.0%
! TCACTAAACTTGAAAAATGA+TGG + chr6.3:18715379-18715398 MS.gene47258:intron 25.0%
! TTCTCTTTACTTAAGTTTGT+AGG + chr6.3:18715143-18715162 MS.gene47258:intron 25.0%
!!! AGTAGCATTTTGAAAATAGA+AGG + chr6.3:18715308-18715327 MS.gene47258:intron 25.0%
!!! GAACAATGGATTAATTTTGA+GGG + chr6.3:18716776-18716795 MS.gene47258:CDS 25.0%
AAAAATGTGTCATGTAGTGT+AGG - chr6.3:18715720-18715739 None:intergenic 30.0%
ACTATCATCTATTGCAAGAA+AGG + chr6.3:18716201-18716220 MS.gene47258:CDS 30.0%
ACTCCAAGAAAGTCAAAAAA+TGG - chr6.3:18716834-18716853 None:intergenic 30.0%
AGGTAAAGAAGACAAATCAA+AGG - chr6.3:18715257-18715276 None:intergenic 30.0%
AGGTTTACCTCAAAAAAGAA+TGG + chr6.3:18716608-18716627 MS.gene47258:intron 30.0%
ATGAGAATCGTTGTTAAATG+AGG - chr6.3:18716447-18716466 None:intergenic 30.0%
CAAAAGAGAACCTTTAAGTA+AGG + chr6.3:18716039-18716058 MS.gene47258:CDS 30.0%
CCTTTACCTAGTTATCAAAT+GGG + chr6.3:18716301-18716320 MS.gene47258:CDS 30.0%
TGAGTTTGAATCTGAATGAT+TGG - chr6.3:18716721-18716740 None:intergenic 30.0%
TGATGAGTGAGATATCATTT+GGG - chr6.3:18715085-18715104 None:intergenic 30.0%
TTGAATCTGAATGATTGGAT+TGG - chr6.3:18716716-18716735 None:intergenic 30.0%
TTGAGATTGGATTCATCAAT+GGG - chr6.3:18716271-18716290 None:intergenic 30.0%
TTGATGAGTGAGATATCATT+TGG - chr6.3:18715086-18715105 None:intergenic 30.0%
! AAAACAATGGAGGGAATTTT+AGG + chr6.3:18715566-18715585 MS.gene47258:CDS 30.0%
! AGTATACCCATTTGATAACT+AGG - chr6.3:18716310-18716329 None:intergenic 30.0%
! CAAAAGCACAAATTAAAACG+AGG - chr6.3:18715193-18715212 None:intergenic 30.0%
! CAATCTTAAGCTTTTCCATT+TGG - chr6.3:18716689-18716708 None:intergenic 30.0%
! CAATTTTAAATATTGGTCCG+CGG + chr6.3:18716357-18716376 MS.gene47258:intron 30.0%
!! TTGTGATAATGGTAATTGCA+GGG + chr6.3:18715972-18715991 MS.gene47258:intron 30.0%
!! TTTGTGATAATGGTAATTGC+AGG + chr6.3:18715971-18715990 MS.gene47258:intron 30.0%
!!! ATGCCATTTTTTGACTTTCT+TGG + chr6.3:18716828-18716847 MS.gene47258:CDS 30.0%
!!! GGAACAATGGATTAATTTTG+AGG + chr6.3:18716775-18716794 MS.gene47258:CDS 30.0%
!!! TTTTTTGACTTTCTTGGAGT+AGG + chr6.3:18716834-18716853 MS.gene47258:CDS 30.0%
AAAAGTCCAAAACACCCTTT+GGG + chr6.3:18715500-18715519 MS.gene47258:CDS 35.0%
AAACAACTTATCGCTGATCA+TGG + chr6.3:18715640-18715659 MS.gene47258:CDS 35.0%
AACATTGCTGAACAACTAGA+AGG + chr6.3:18715679-18715698 MS.gene47258:CDS 35.0%
AAGAGAACCTTTAAGTAAGG+AGG + chr6.3:18716042-18716061 MS.gene47258:CDS 35.0%
ATACACTTCATGGTACCAAA+TGG + chr6.3:18716089-18716108 MS.gene47258:CDS 35.0%
ATTATCATGTGATCAAGGCT+AGG + chr6.3:18716164-18716183 MS.gene47258:CDS 35.0%
CATTCAGATTCAAACTCAGA+AGG + chr6.3:18716723-18716742 MS.gene47258:CDS 35.0%
GCCTTTACCTAGTTATCAAA+TGG + chr6.3:18716300-18716319 MS.gene47258:CDS 35.0%
GTTGAGATTGGATTCATCAA+TGG - chr6.3:18716272-18716291 None:intergenic 35.0%
TACACTTCATGGTACCAAAT+GGG + chr6.3:18716090-18716109 MS.gene47258:CDS 35.0%
TTAAGCTTAGCATCTTCAGA+TGG - chr6.3:18715622-18715641 None:intergenic 35.0%
! AAAGGTTCTCTTTTGATGCT+AGG - chr6.3:18716034-18716053 None:intergenic 35.0%
! ATGATGTAAGTTGAGATGGA+AGG - chr6.3:18715435-18715454 None:intergenic 35.0%
! CCCATTTGATAACTAGGTAA+AGG - chr6.3:18716304-18716323 None:intergenic 35.0%
! CTGATCATGGTGCTAAAAAT+TGG + chr6.3:18715653-18715672 MS.gene47258:CDS 35.0%
! GATGATGATGTAAGTTGAGA+TGG - chr6.3:18715439-18715458 None:intergenic 35.0%
! TGATGTAAGTTGAGATGGAA+GGG - chr6.3:18715434-18715453 None:intergenic 35.0%
! TTGTGATGGCAAATTTTGCT+GGG - chr6.3:18716246-18716265 None:intergenic 35.0%
! TTTTTGACCATGCTCTCATT+AGG - chr6.3:18715550-18715569 None:intergenic 35.0%
AATCCAATCTCAACCTCACT+AGG + chr6.3:18716278-18716297 MS.gene47258:CDS 40.0%
ACCTTTAAGTAAGGAGGAAG+AGG + chr6.3:18716048-18716067 MS.gene47258:CDS 40.0%
AGATGGTTTCCAATGAGCTT+TGG - chr6.3:18715605-18715624 None:intergenic 40.0%
AGCATGGTCAAAAACAATGG+AGG + chr6.3:18715556-18715575 MS.gene47258:CDS 40.0%
CACATTTGCAAACACTTTCC+TGG + chr6.3:18716115-18716134 MS.gene47258:CDS 40.0%
CAGGGAAAAGCTGTAGATTA+AGG + chr6.3:18715990-18716009 MS.gene47258:intron 40.0%
GAAAAGTCCAAAACACCCTT+TGG + chr6.3:18715499-18715518 MS.gene47258:CDS 40.0%
GAACAACTAGAAGGAAGAAC+AGG + chr6.3:18715688-18715707 MS.gene47258:CDS 40.0%
GCATGGTCAAAAACAATGGA+GGG + chr6.3:18715557-18715576 MS.gene47258:CDS 40.0%
GCTTGACAATGTGAACCAAA+TGG + chr6.3:18716671-18716690 MS.gene47258:CDS 40.0%
GGAAAAGCTGTAGATTAAGG+TGG + chr6.3:18715993-18716012 MS.gene47258:CDS 40.0%
TCCTCTTCCTCCTTACTTAA+AGG - chr6.3:18716052-18716071 None:intergenic 40.0%
TGCAATTATTGTTCTAGCCG+CGG - chr6.3:18716377-18716396 None:intergenic 40.0%
TTCATCAATGGGACTTGTGA+TGG - chr6.3:18716260-18716279 None:intergenic 40.0%
TTGAGGGACAGTGAAAATGT+GGG + chr6.3:18716792-18716811 MS.gene47258:CDS 40.0%
TTGCAGCTTCATACACTTCA+TGG + chr6.3:18716079-18716098 MS.gene47258:CDS 40.0%
TTTGAGGGACAGTGAAAATG+TGG + chr6.3:18716791-18716810 MS.gene47258:CDS 40.0%
TTTGCAAACACTTTCCTGGA+AGG + chr6.3:18716119-18716138 MS.gene47258:CDS 40.0%
TTTGCAAATGTGTGCCCATT+TGG - chr6.3:18716107-18716126 None:intergenic 40.0%
! CTTGTGATGGCAAATTTTGC+TGG - chr6.3:18716247-18716266 None:intergenic 40.0%
! GAGAGCATGGTCAAAAACAA+TGG + chr6.3:18715553-18715572 MS.gene47258:CDS 40.0%
! TCTCATAGCACTGCAAGTTT+TGG - chr6.3:18716649-18716668 None:intergenic 40.0%
!!! GCTTCTGCCATTCTTTTTTG+AGG - chr6.3:18716618-18716637 None:intergenic 40.0%
AACTAGGTAAAGGCCTAGTG+AGG - chr6.3:18716294-18716313 None:intergenic 45.0%
AGAGGGTTCGAAATCCCAAA+GGG - chr6.3:18715517-18715536 None:intergenic 45.0%
ATCATCTTCTACTCCCCTTC+AGG + chr6.3:18715453-18715472 MS.gene47258:intron 45.0%
ATCATGTGATCAAGGCTAGG+AGG + chr6.3:18716167-18716186 MS.gene47258:CDS 45.0%
CTAAGCCTTCCAAAGCTCAT+TGG + chr6.3:18715593-18715612 MS.gene47258:CDS 45.0%
GATCCAACCTAATGAGAGCA+TGG + chr6.3:18715540-18715559 MS.gene47258:CDS 45.0%
GCTGCAACAAACAGGAACAA+TGG + chr6.3:18716762-18716781 MS.gene47258:CDS 45.0%
GTTACCAACATGACCCTGAA+GGG - chr6.3:18715470-18715489 None:intergenic 45.0%
TCATCTTCTACTCCCCTTCA+GGG + chr6.3:18715454-18715473 MS.gene47258:intron 45.0%
TGACCATGCTCTCATTAGGT+TGG - chr6.3:18715546-18715565 None:intergenic 45.0%
TGTTACCAACATGACCCTGA+AGG - chr6.3:18715471-18715490 None:intergenic 45.0%
TTACCAACATGACCCTGAAG+GGG - chr6.3:18715469-18715488 None:intergenic 45.0%
!! CATTAGGTTGGATCACCAGA+GGG - chr6.3:18715534-18715553 None:intergenic 45.0%
!! GGGTCATGTTGGTAACAATG+AGG + chr6.3:18715474-18715493 MS.gene47258:intron 45.0%
!! GGTTTCCAATGAGCTTTGGA+AGG - chr6.3:18715601-18715620 None:intergenic 45.0%
!! TCATTAGGTTGGATCACCAG+AGG - chr6.3:18715535-18715554 None:intergenic 45.0%
!!! CGAAATCCCAAAGGGTGTTT+TGG - chr6.3:18715509-18715528 None:intergenic 45.0%
!!! TATAAAACAATTTTAAATAT+TGG + chr6.3:18716350-18716369 MS.gene47258:intron 5.0%
!!! TGTTTTATAAAATAAAATAA+AGG - chr6.3:18716339-18716358 None:intergenic 5.0%
AGGCCTAGTGAGGTTGAGAT+TGG - chr6.3:18716284-18716303 None:intergenic 50.0%
AGTGCATTGTCTGTCCTTCC+AGG - chr6.3:18716136-18716155 None:intergenic 50.0%
CAGAGGGTTCGAAATCCCAA+AGG - chr6.3:18715518-18715537 None:intergenic 50.0%
CTGAGTCAGCTGCAACAAAC+AGG + chr6.3:18716754-18716773 MS.gene47258:CDS 50.0%
GATCAAGGCTAGGAGGCAAA+GGG + chr6.3:18716174-18716193 MS.gene47258:CDS 50.0%
TGATCAAGGCTAGGAGGCAA+AGG + chr6.3:18716173-18716192 MS.gene47258:CDS 50.0%
!! CTTTGGGATTTCGAACCCTC+TGG + chr6.3:18715516-18715535 MS.gene47258:CDS 50.0%
ACTCCCCTTCAGGGTCATGT+TGG + chr6.3:18715463-18715482 MS.gene47258:intron 55.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 18715063 18716866 18715063 ID=MS.gene47258
chr6.3 mRNA 18715063 18716866 18715063 ID=MS.gene47258.t1;Parent=MS.gene47258
chr6.3 exon 18715063 18715107 18715063 ID=MS.gene47258.t1.exon1;Parent=MS.gene47258.t1
chr6.3 CDS 18715063 18715107 18715063 ID=cds.MS.gene47258.t1;Parent=MS.gene47258.t1
chr6.3 exon 18715475 18715709 18715475 ID=MS.gene47258.t1.exon2;Parent=MS.gene47258.t1
chr6.3 CDS 18715475 18715709 18715475 ID=cds.MS.gene47258.t1;Parent=MS.gene47258.t1
chr6.3 exon 18715993 18716322 18715993 ID=MS.gene47258.t1.exon3;Parent=MS.gene47258.t1
chr6.3 CDS 18715993 18716322 18715993 ID=cds.MS.gene47258.t1;Parent=MS.gene47258.t1
chr6.3 exon 18716610 18716866 18716610 ID=MS.gene47258.t1.exon4;Parent=MS.gene47258.t1
chr6.3 CDS 18716610 18716866 18716610 ID=cds.MS.gene47258.t1;Parent=MS.gene47258.t1
Gene Sequence

>MS.gene47258

ATGTGGGCTTTACTCTCATCCCAAATGATATCTCACTCATCAAGAGTAAACAAACTCTTTTTGTTTTCTTTGCTCCGTTTTTCTCTTTACTTAAGTTTGTAGGAAATGAGAATAACTAAATAATTCACCTCGTTTTAATTTGTGCTTTTGCTTTTTTTTTAAATGTTGTCTTTCTTCTCTTATTCATGTATCCTTTGATTTGTCTTCTTTACCTTCTTTTTTACTTGCTTATTTTCTTCACTACTAGTAGCATTTTGAAAATAGAAGGAAAAAAAATCATTTTTCTAAAGTTAAAGCTTTTCTTTTTATCGCGAGTTCACTAAACTTGAAAAATGATGGTTATGGTTTCTCTTTAGACTTGAAAATTTCCCTTCCATCTCAACTTACATCATCATCTTCTACTCCCCTTCAGGGTCATGTTGGTAACAATGAGGCTGAAAAGTCCAAAACACCCTTTGGGATTTCGAACCCTCTGGTGATCCAACCTAATGAGAGCATGGTCAAAAACAATGGAGGGAATTTTAGGAACACTAAGCCTTCCAAAGCTCATTGGAAACCATCTGAAGATGCTAAGCTTAAACAACTTATCGCTGATCATGGTGCTAAAAATTGGAACAACATTGCTGAACAACTAGAAGGAAGAACAGGTTTGATCCTACACTACATGACACATTTTTATTTATTAAATTTTAAAAAAATTTACTAATTTATTTTTTAACGAAATGTTTTTTTTAATATTGTTAATAATTAATTTTTAATTTAATTTTTTTACAAAAATAAGTATTTAAAAAATTGAACATTTTCAAGCGGTACGTTTAGTATTTTTATTAAAATTGCATAAGTATTTTATTTTGATTAGACATTTCTTTAATTTCGATATTTATTTGTAATTTAACATTTAATTTTTTTTTGTGATAATGGTAATTGCAGGGAAAAGCTGTAGATTAAGGTGGCTTAATCAGCTAGATCCTAGCATCAAAAGAGAACCTTTAAGTAAGGAGGAAGAGGAGATGCTTTTGCAGCTTCATACACTTCATGGTACCAAATGGGCACACATTTGCAAACACTTTCCTGGAAGGACAGACAATGCACTGAAAAATCATTATCATGTGATCAAGGCTAGGAGGCAAAGGGAACTACTATCATCTATTGCAAGAAAGGAAAAGCTAACATATGAAATCCCAGCAAAATTTGCCATCACAAGTCCCATTGATGAATCCAATCTCAACCTCACTAGGCCTTTACCTAGTTATCAAATGGGTATACTTTGAATCCTTTATTTTATTTTATAAAACAATTTTAAATATTGGTCCGCGGCTAGAACAATAATTGCAATATCATTTTTTTTATGTCTTTGCATCTTTGATTGATGTTGTATCGGCCTCATTTAACAACGATTCTCATTTAAACCTTTAAATTGCTTGAAAATTTTGTTATCTTCTCTCATGTCTTAGTTTATGTTAAATATCATATACAGTATTAATTTACTTGACATATGATATATTTTTGACCATGTTGTTGATTTTTTTATTGTGTTATATATTTAGGTTTACCTCAAAAAAGAATGGCAGAAGCTGAATTTGCCAAAACTTGCAGTGCTATGAGAGAGCTTGACAATGTGAACCAAATGGAAAAGCTTAAGATTGCAGACCAATCCAATCATTCAGATTCAAACTCAGAAGGTTCATCATCTGAGTCAGCTGCAACAAACAGGAACAATGGATTAATTTTGAGGGACAGTGAAAATGTGGGAGATATGATTAAGATGCCATTTTTTGACTTTCTTGGAGTAGGTGATACATAG
Protein sequence

>MS.gene47258.t1

MWALLSSQMISHSSRGHVGNNEAEKSKTPFGISNPLVIQPNESMVKNNGGNFRNTKPSKAHWKPSEDAKLKQLIADHGAKNWNNIAEQLEGRTGKSCRLRWLNQLDPSIKREPLSKEEEEMLLQLHTLHGTKWAHICKHFPGRTDNALKNHYHVIKARRQRELLSSIARKEKLTYEIPAKFAITSPIDESNLNLTRPLPSYQMGLPQKRMAEAEFAKTCSAMRELDNVNQMEKLKIADQSNHSDSNSEGSSSESAATNRNNGLILRDSENVGDMIKMPFFDFLGVGDT