AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47262

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47262.t1 MTR_6g027370 95.506 267 12 0 1 267 81 347 0.0 505
MS.gene47262.t1 MTR_6g027360 61.004 259 78 8 11 267 71 308 3.80e-94 280
MS.gene47262.t1 MTR_6g027340 54.475 257 57 6 11 267 9 205 1.72e-81 244
MS.gene47262.t1 MTR_7g086960 54.945 273 106 4 10 265 80 352 6.54e-75 232
MS.gene47262.t1 MTR_4g082040 68.333 120 38 0 12 131 98 217 6.63e-57 188
MS.gene47262.t1 MTR_5g041570 51.397 179 78 3 5 183 122 291 4.01e-54 181
MS.gene47262.t1 MTR_6g074860 70.192 104 31 0 19 122 4 107 1.16e-51 169
MS.gene47262.t1 MTR_3g089045 70.909 110 32 0 13 122 10 119 2.36e-51 170
MS.gene47262.t1 MTR_4g019370 54.902 102 46 0 18 119 37 138 1.57e-38 138
MS.gene47262.t1 MTR_4g094982 48.062 129 60 1 18 139 4 132 6.56e-38 134
MS.gene47262.t1 MTR_5g016510 45.455 132 66 1 18 149 4 129 1.14e-36 132
MS.gene47262.t1 MTR_6g015455 50.980 102 50 0 18 119 4 105 4.37e-33 127
MS.gene47262.t1 MTR_5g082910 42.975 121 69 0 18 138 18 138 5.39e-33 122
MS.gene47262.t1 MTR_3g101290 49.020 102 52 0 18 119 36 137 3.70e-32 118
MS.gene47262.t1 MTR_3g110028 45.763 118 63 1 9 126 76 192 4.13e-31 122
MS.gene47262.t1 MTR_1g026870 44.915 118 64 1 9 126 76 192 8.64e-30 118
MS.gene47262.t1 MTR_7g061330 46.847 111 58 1 9 119 104 213 1.55e-28 114
MS.gene47262.t1 MTR_7g461410 46.847 111 58 1 9 119 104 213 1.55e-28 114
MS.gene47262.t1 MTR_7g061330 46.847 111 58 1 9 119 68 177 1.99e-28 113
MS.gene47262.t1 MTR_3g463400 48.039 102 53 0 18 119 132 233 7.42e-28 111
MS.gene47262.t1 MTR_5g070020 38.286 175 97 3 14 178 117 290 9.39e-28 109
MS.gene47262.t1 MTR_5g049190 46.667 105 53 1 18 122 18 119 4.47e-27 105
MS.gene47262.t1 MTR_7g451170 46.078 102 55 0 18 119 190 291 5.09e-26 105
MS.gene47262.t1 MTR_7g037260 44.660 103 57 0 18 120 144 246 8.66e-26 104
MS.gene47262.t1 MTR_2g067420 49.485 97 48 1 19 114 16 112 6.17e-25 101
MS.gene47262.t1 MTR_2g097910 44.144 111 61 1 19 128 22 132 2.64e-24 99.8
MS.gene47262.t1 MTR_4g105660 43.137 102 58 0 18 119 179 280 3.57e-24 100
MS.gene47262.t1 MTR_5g010650 44.762 105 57 1 9 113 101 204 7.69e-24 100
MS.gene47262.t1 MTR_3g077650 47.059 102 54 0 18 119 180 281 8.16e-24 100
MS.gene47262.t1 MTR_4g088015 44.554 101 56 0 18 118 220 320 1.93e-23 99.0
MS.gene47262.t1 MTR_7g037130 46.392 97 52 0 18 114 144 240 2.22e-23 97.8
MS.gene47262.t1 MTR_2g089450 45.098 102 53 2 19 118 14 114 2.46e-23 95.9
MS.gene47262.t1 MTR_4g065017 42.453 106 60 1 19 123 19 124 3.40e-23 97.1
MS.gene47262.t1 MTR_3g074520 45.631 103 53 2 19 119 14 115 3.61e-23 97.1
MS.gene47262.t1 MTR_7g450950 39.535 129 75 1 8 133 146 274 3.65e-23 97.1
MS.gene47262.t1 MTR_2g089620 31.034 203 137 3 19 218 14 216 4.80e-23 96.3
MS.gene47262.t1 MTR_3g052450 42.991 107 60 1 19 124 42 148 5.46e-23 98.2
MS.gene47262.t1 MTR_1g100667 40.351 114 67 1 19 131 15 128 6.32e-23 95.1
MS.gene47262.t1 MTR_5g042030 43.137 102 57 1 19 119 9 110 6.33e-23 95.5
MS.gene47262.t1 MTR_6g055910 41.748 103 59 1 19 120 16 118 8.29e-23 95.1
MS.gene47262.t1 MTR_7g115650 38.129 139 80 3 19 151 14 152 1.18e-22 92.8
MS.gene47262.t1 MTR_7g110830 41.905 105 60 1 19 122 14 118 1.19e-22 95.9
MS.gene47262.t1 MTR_7g035350 45.361 97 53 0 17 113 223 319 1.20e-22 96.7
MS.gene47262.t1 MTR_0008s0390 44.118 102 56 1 19 119 15 116 1.47e-22 94.0
MS.gene47262.t1 MTR_3g052430 40.517 116 68 1 19 133 43 158 1.53e-22 97.1
MS.gene47262.t1 MTR_7g010210 41.176 102 59 1 19 119 14 115 1.65e-22 94.0
MS.gene47262.t1 MTR_7g010210 41.176 102 59 1 19 119 14 115 1.88e-22 94.7
MS.gene47262.t1 MTR_0008s0470 44.118 102 56 1 19 119 15 116 2.37e-22 94.0
MS.gene47262.t1 MTR_4g063100 42.593 108 59 2 15 120 5 111 2.55e-22 93.2
MS.gene47262.t1 MTR_1g057980 45.745 94 51 0 19 112 80 173 4.16e-22 93.2
MS.gene47262.t1 MTR_1g076150 26.172 256 163 5 19 266 14 251 4.77e-22 92.4
MS.gene47262.t1 MTR_3g461490 34.483 174 97 4 19 182 14 180 5.21e-22 93.6
MS.gene47262.t1 MTR_3g028740 41.026 117 67 2 6 121 12 127 5.28e-22 94.0
MS.gene47262.t1 MTR_1g085640 40.952 105 61 1 19 122 14 118 6.06e-22 94.4
MS.gene47262.t1 MTR_8g017440 43.689 103 55 2 19 119 14 115 6.63e-22 93.6
MS.gene47262.t1 MTR_5g029840 42.157 102 58 1 19 119 14 115 8.48e-22 93.2
MS.gene47262.t1 MTR_0251s0050 43.137 102 57 1 19 119 15 116 9.19e-22 92.0
MS.gene47262.t1 MTR_7g087130 33.775 151 92 2 19 168 14 157 1.11e-21 92.8
MS.gene47262.t1 MTR_8g060940 44.340 106 58 1 13 117 3 108 2.03e-21 90.5
MS.gene47262.t1 MTR_3g039990 38.679 106 64 1 19 123 15 120 2.13e-21 91.7
MS.gene47262.t1 MTR_5g010020 45.263 95 51 1 19 112 14 108 2.25e-21 92.0
MS.gene47262.t1 MTR_4g105130 41.176 102 59 1 19 119 14 115 2.25e-21 92.4
MS.gene47262.t1 MTR_8g098860 40.952 105 61 1 19 122 14 118 2.28e-21 91.7
MS.gene47262.t1 MTR_6g012180 41.237 97 56 1 19 114 14 110 2.34e-21 91.7
MS.gene47262.t1 MTR_4g100720 42.857 112 62 2 10 119 5 116 3.03e-21 88.2
MS.gene47262.t1 MTR_1g085040 40.566 106 60 2 19 122 14 118 3.15e-21 92.0
MS.gene47262.t1 MTR_0140s0030 41.121 107 61 2 15 119 10 116 3.39e-21 91.3
MS.gene47262.t1 MTR_0489s0020 41.121 107 61 2 15 119 10 116 3.39e-21 91.3
MS.gene47262.t1 MTR_1g100653 39.252 107 64 1 19 124 14 120 4.18e-21 90.5
MS.gene47262.t1 MTR_2g089420 40.870 115 62 3 19 131 13 123 4.54e-21 92.4
MS.gene47262.t1 MTR_7g017260 33.974 156 97 2 19 171 27 179 5.10e-21 90.1
MS.gene47262.t1 MTR_2g064160 41.748 103 57 2 19 119 13 114 5.32e-21 90.5
MS.gene47262.t1 MTR_2g011660 43.137 102 57 1 19 119 15 116 5.74e-21 90.9
MS.gene47262.t1 MTR_1g017000 28.514 249 140 9 19 265 14 226 6.38e-21 89.4
MS.gene47262.t1 MTR_1g112760 40.777 103 58 2 19 119 15 116 8.87e-21 88.6
MS.gene47262.t1 MTR_7g111290 46.809 94 47 2 19 110 14 106 9.18e-21 90.9
MS.gene47262.t1 MTR_8g017540 32.124 193 98 6 19 193 60 237 1.01e-20 90.9
MS.gene47262.t1 MTR_4g091490 44.118 102 56 1 19 119 15 116 1.02e-20 90.5
MS.gene47262.t1 MTR_4g082230 42.157 102 58 1 19 119 14 115 1.09e-20 90.9
MS.gene47262.t1 MTR_6g012690 29.344 259 142 6 19 264 14 244 1.14e-20 90.1
MS.gene47262.t1 MTR_5g014990 42.718 103 57 2 19 119 14 116 1.22e-20 89.7
MS.gene47262.t1 MTR_7g096930 39.669 121 68 2 19 134 14 134 1.44e-20 89.0
MS.gene47262.t1 MTR_5g079220 42.157 102 58 1 19 119 23 124 1.69e-20 88.6
MS.gene47262.t1 MTR_1g110460 34.146 164 98 4 9 164 15 176 2.02e-20 89.0
MS.gene47262.t1 MTR_2g096380 41.509 106 59 2 19 122 8 112 2.09e-20 87.4
MS.gene47262.t1 MTR_7g117730 41.176 102 59 1 19 119 14 115 2.53e-20 87.8
MS.gene47262.t1 MTR_8g042410 37.097 124 77 1 2 124 22 145 2.92e-20 90.1
MS.gene47262.t1 MTR_3g077110 40.777 103 58 2 19 119 14 115 3.29e-20 89.0
MS.gene47262.t1 MTR_4g082290 42.157 102 58 1 19 119 14 115 4.23e-20 89.4
MS.gene47262.t1 MTR_2g099740 41.748 103 57 2 19 119 14 115 4.27e-20 89.0
MS.gene47262.t1 MTR_8g027345 40.385 104 61 1 19 121 14 117 7.43e-20 87.4
MS.gene47262.t1 MTR_8g095390 40.196 102 60 1 19 119 14 115 7.60e-20 87.4
MS.gene47262.t1 MTR_4g125520 40.566 106 62 1 19 123 14 119 7.99e-20 87.4
MS.gene47262.t1 MTR_0001s0360 41.176 102 59 1 19 119 9 110 8.62e-20 86.3
MS.gene47262.t1 MTR_5g078950 40.777 103 60 1 13 114 3 105 8.93e-20 86.3
MS.gene47262.t1 MTR_5g079670 42.718 103 56 2 19 119 13 114 9.71e-20 85.1
MS.gene47262.t1 MTR_8g017340 41.748 103 58 1 19 119 14 116 1.06e-19 88.6
MS.gene47262.t1 MTR_4g073420 42.157 102 58 1 19 119 14 115 1.12e-19 86.7
MS.gene47262.t1 MTR_7g061550 37.719 114 68 1 19 129 7 120 1.12e-19 87.4
MS.gene47262.t1 MTR_5g078860 42.157 102 58 1 19 119 9 110 1.13e-19 86.7
MS.gene47262.t1 MTR_4g478180 37.288 118 70 3 19 133 15 131 1.19e-19 87.4
MS.gene47262.t1 MTR_5g007370 40.187 107 61 2 19 123 14 119 1.30e-19 86.7
MS.gene47262.t1 MTR_6g009430 42.157 102 58 1 19 119 14 115 1.30e-19 87.0
MS.gene47262.t1 MTR_1g083630 42.453 106 59 2 19 123 14 118 1.59e-19 88.2
MS.gene47262.t1 MTR_1g043080 41.176 102 59 1 19 119 14 115 1.63e-19 85.5
MS.gene47262.t1 MTR_3g103570 41.748 103 58 2 19 119 14 116 1.92e-19 86.7
MS.gene47262.t1 MTR_0008s0280 41.237 97 54 2 19 113 14 109 1.95e-19 84.7
MS.gene47262.t1 MTR_1g062940 39.806 103 59 2 19 119 8 109 2.16e-19 84.3
MS.gene47262.t1 MTR_1g086530 35.537 121 75 2 13 131 29 148 2.24e-19 85.5
MS.gene47262.t1 MTR_8g017500 40.777 103 58 2 19 119 14 115 2.27e-19 86.7
MS.gene47262.t1 MTR_5g078800 41.176 102 59 1 19 119 9 110 2.49e-19 85.1
MS.gene47262.t1 MTR_3g011610 40.367 109 60 2 19 124 39 145 2.58e-19 87.4
MS.gene47262.t1 MTR_5g079290 40.196 102 60 1 19 119 19 120 3.39e-19 84.7
MS.gene47262.t1 MTR_4g097570 43.878 98 52 2 19 113 14 111 3.68e-19 85.1
MS.gene47262.t1 MTR_7g011170 35.246 122 77 2 19 138 14 135 4.36e-19 85.1
MS.gene47262.t1 MTR_8g017390 41.748 103 58 1 19 119 14 116 4.74e-19 86.7
MS.gene47262.t1 MTR_3g097450 40.196 102 60 1 19 119 14 115 5.60e-19 84.7
MS.gene47262.t1 MTR_2g088170 44.444 108 57 2 19 124 31 137 5.84e-19 86.3
MS.gene47262.t1 MTR_6g055910 49.275 69 35 0 52 120 21 89 6.06e-19 84.0
MS.gene47262.t1 MTR_1g073170 33.582 134 79 3 12 136 8 140 6.23e-19 84.0
MS.gene47262.t1 MTR_1g043050 34.667 150 85 4 19 161 14 157 6.77e-19 84.0
MS.gene47262.t1 MTR_0063s0090 36.134 119 68 3 19 130 14 131 7.55e-19 83.2
MS.gene47262.t1 MTR_0197s0010 36.364 132 78 3 22 148 6 136 8.19e-19 83.2
MS.gene47262.t1 MTR_5g078910 40.196 102 60 1 19 119 9 110 9.90e-19 84.0
MS.gene47262.t1 MTR_5g062790 38.462 117 70 2 19 133 11 127 1.05e-18 84.0
MS.gene47262.t1 MTR_1g017140 40.777 103 59 2 19 119 14 116 1.07e-18 84.7
MS.gene47262.t1 MTR_8g017350 42.308 104 56 3 19 119 14 116 1.13e-18 85.9
MS.gene47262.t1 MTR_1g021230 38.462 104 63 1 19 121 59 162 1.24e-18 85.1
MS.gene47262.t1 MTR_8g020490 42.157 102 58 1 19 119 10 111 1.34e-18 83.2
MS.gene47262.t1 MTR_4g029540 40.000 105 61 2 19 121 12 116 1.43e-18 83.6
MS.gene47262.t1 MTR_4g485530 41.748 103 57 2 19 119 14 115 1.92e-18 81.3
MS.gene47262.t1 MTR_5g079120 33.548 155 93 4 19 172 63 208 2.04e-18 83.2
MS.gene47262.t1 MTR_8g006470 40.187 107 62 2 19 123 12 118 2.54e-18 82.8
MS.gene47262.t1 MTR_7g076740 38.889 108 62 3 19 123 14 120 2.58e-18 83.2
MS.gene47262.t1 MTR_4g097570 43.299 97 53 2 19 113 14 110 2.89e-18 82.8
MS.gene47262.t1 MTR_5g088080 40.952 105 57 3 19 121 14 115 3.61e-18 82.0
MS.gene47262.t1 MTR_5g088150 40.952 105 57 3 19 121 14 115 3.61e-18 82.0
MS.gene47262.t1 MTR_5g488210 40.952 105 57 3 19 121 14 115 3.61e-18 82.0
MS.gene47262.t1 MTR_5g488170 40.952 105 57 3 19 121 14 115 3.68e-18 81.6
MS.gene47262.t1 MTR_1g045610 40.000 105 60 2 19 121 23 126 3.68e-18 82.0
MS.gene47262.t1 MTR_1g086510 35.965 114 72 1 19 131 23 136 3.74e-18 82.0
MS.gene47262.t1 MTR_0247s0040 42.718 103 58 1 11 112 1 103 3.92e-18 80.1
MS.gene47262.t1 MTR_5g088640 40.952 105 57 3 19 121 14 115 4.82e-18 82.0
MS.gene47262.t1 MTR_4g128670 41.837 98 55 2 19 114 14 111 6.91e-18 82.4
MS.gene47262.t1 MTR_7g035075 35.965 114 72 1 19 131 16 129 7.41e-18 80.1
MS.gene47262.t1 MTR_4g057635 37.607 117 70 3 19 132 14 130 7.46e-18 82.0
MS.gene47262.t1 MTR_3g065440 39.252 107 62 2 19 123 14 119 9.03e-18 81.6
MS.gene47262.t1 MTR_5g088610 29.255 188 130 3 19 203 11 198 9.10e-18 82.0
MS.gene47262.t1 MTR_3g083540 39.216 102 61 1 19 119 43 144 9.30e-18 81.6
MS.gene47262.t1 MTR_7g102110 36.842 114 70 2 19 130 14 127 9.53e-18 80.9
MS.gene47262.t1 MTR_2g034790 30.719 153 104 2 19 170 14 165 1.05e-17 81.6
MS.gene47262.t1 MTR_5g078930 37.963 108 66 1 13 119 5 112 1.61e-17 79.3
MS.gene47262.t1 MTR_5g078140 39.252 107 62 2 19 123 14 119 1.73e-17 80.9
MS.gene47262.t1 MTR_8g031360 38.462 104 60 3 19 119 15 117 2.02e-17 80.5
MS.gene47262.t1 MTR_2g033170 36.842 114 71 1 19 131 26 139 2.14e-17 80.9
MS.gene47262.t1 MTR_2g095520 40.816 98 56 2 19 114 14 111 2.80e-17 80.5
MS.gene47262.t1 MTR_4g102380 39.806 103 59 2 19 119 14 115 4.64e-17 79.0
MS.gene47262.t1 MTR_4g121460 36.036 111 70 1 19 128 14 124 7.14e-17 79.3
MS.gene47262.t1 MTR_0193s0090 29.577 213 130 5 11 214 1 202 7.22e-17 77.4
MS.gene47262.t1 MTR_4g123040 36.842 114 71 1 19 131 26 139 7.87e-17 79.0
MS.gene47262.t1 MTR_7g111290 57.627 59 25 0 52 110 6 64 9.39e-17 79.0
MS.gene47262.t1 MTR_6g006030 41.053 95 55 1 19 112 16 110 1.20e-16 76.6
MS.gene47262.t1 MTR_6g090405 39.806 103 60 2 19 119 14 116 7.01e-16 75.5
MS.gene47262.t1 MTR_4g063100 46.377 69 37 0 52 120 14 82 7.23e-16 75.1
MS.gene47262.t1 MTR_8g468380 31.304 115 78 1 22 136 25 138 3.08e-15 75.5
MS.gene47262.t1 MTR_2g096380 43.662 71 40 0 52 122 23 93 5.44e-15 72.4
MS.gene47262.t1 MTR_3g045430 34.906 106 68 1 19 123 15 120 9.16e-15 73.2
MS.gene47262.t1 MTR_5g007300 44.000 75 41 1 19 92 66 140 1.72e-14 69.3
MS.gene47262.t1 MTR_5g038910 30.702 114 77 1 22 135 29 140 3.68e-14 72.0
MS.gene47262.t1 MTR_5g038910 30.702 114 77 1 22 135 29 140 4.02e-14 72.0
MS.gene47262.t1 MTR_6g080360 34.737 95 61 1 18 112 478 571 6.79e-14 71.6
MS.gene47262.t1 MTR_6g080360 34.737 95 61 1 18 112 258 351 8.90e-14 71.2
MS.gene47262.t1 MTR_7g109320 39.216 102 61 1 19 119 14 115 7.40e-13 67.8
MS.gene47262.t1 MTR_1g008970 40.278 72 42 1 38 109 111 181 2.10e-12 65.9
MS.gene47262.t1 MTR_4g128190 40.964 83 47 2 52 133 34 115 8.11e-12 63.9
MS.gene47262.t1 MTR_7g115550 32.990 97 64 1 20 116 8 103 8.34e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47262.t1 AT1G69560 51.892 185 76 3 19 193 107 288 4.70e-58 188
MS.gene47262.t1 AT1G69560 51.892 185 76 3 19 193 123 304 6.68e-58 188
MS.gene47262.t1 AT1G26780 39.338 272 128 6 19 265 98 357 1.14e-56 186
MS.gene47262.t1 AT1G17950 40.079 252 135 7 19 267 5 243 2.59e-56 181
MS.gene47262.t1 AT1G26780 65.873 126 42 1 19 144 98 222 2.21e-54 177
MS.gene47262.t1 AT4G33450 40.541 259 129 8 11 265 10 247 1.64e-53 174
MS.gene47262.t1 AT5G17800 40.590 271 107 7 13 265 87 321 2.10e-52 173
MS.gene47262.t1 AT1G73410 40.076 262 118 6 19 267 6 241 1.36e-49 164
MS.gene47262.t1 AT1G73410 72.115 104 29 0 19 122 6 109 3.35e-49 161
MS.gene47262.t1 AT3G29020 63.248 117 43 0 14 130 60 176 4.23e-49 162
MS.gene47262.t1 AT3G29020 63.248 117 43 0 14 130 62 178 2.76e-48 162
MS.gene47262.t1 AT3G55730 55.660 106 47 0 18 123 55 160 6.51e-37 135
MS.gene47262.t1 AT5G39700 60.606 99 39 0 20 118 57 155 6.79e-37 129
MS.gene47262.t1 AT2G39880 54.054 111 51 0 12 122 43 153 4.72e-36 132
MS.gene47262.t1 AT4G37260 53.922 102 47 0 18 119 12 113 3.56e-35 128
MS.gene47262.t1 AT5G67300 52.941 102 48 0 18 119 5 106 4.03e-35 128
MS.gene47262.t1 AT3G50060 49.020 102 52 0 18 119 5 106 1.36e-33 124
MS.gene47262.t1 AT3G09230 51.961 102 49 0 18 119 54 155 1.73e-33 125
MS.gene47262.t1 AT2G23290 50.980 102 50 0 18 119 12 113 7.74e-33 122
MS.gene47262.t1 AT3G09370 50.000 102 51 0 18 119 134 235 5.32e-30 117
MS.gene47262.t1 AT3G09370 50.000 102 51 0 18 119 129 230 5.77e-30 117
MS.gene47262.t1 AT5G02320 35.079 191 114 3 18 198 66 256 6.20e-30 117
MS.gene47262.t1 AT5G02320 35.079 191 114 3 18 198 126 316 6.83e-30 117
MS.gene47262.t1 AT5G02320 35.079 191 114 3 18 198 126 316 6.83e-30 117
MS.gene47262.t1 AT3G09370 50.000 102 51 0 18 119 142 243 7.52e-30 117
MS.gene47262.t1 AT5G11510 42.373 118 67 1 9 126 72 188 8.56e-29 115
MS.gene47262.t1 AT5G11510 42.373 118 67 1 9 126 72 188 8.56e-29 115
MS.gene47262.t1 AT5G11510 42.373 118 67 1 9 126 72 188 8.56e-29 115
MS.gene47262.t1 AT5G11510 42.373 118 67 1 9 126 72 188 1.48e-28 114
MS.gene47262.t1 AT5G11510 42.373 118 67 1 9 126 72 188 1.59e-28 114
MS.gene47262.t1 AT4G32730 43.243 111 62 1 9 119 78 187 1.75e-27 111
MS.gene47262.t1 AT4G32730 43.243 111 62 1 9 119 78 187 2.01e-27 111
MS.gene47262.t1 AT4G32730 43.243 111 62 1 9 119 78 187 2.01e-27 111
MS.gene47262.t1 AT4G32730 43.243 111 62 1 9 119 78 187 2.01e-27 111
MS.gene47262.t1 AT4G32730 43.243 111 62 1 9 119 78 187 2.01e-27 111
MS.gene47262.t1 AT5G11050 48.039 102 53 0 18 119 104 205 5.07e-26 105
MS.gene47262.t1 AT5G58850 43.103 116 66 0 4 119 90 205 9.86e-26 105
MS.gene47262.t1 AT3G48920 48.958 96 48 1 19 113 20 115 3.20e-25 100
MS.gene47262.t1 AT5G40360 43.590 117 61 2 19 135 158 269 5.43e-25 102
MS.gene47262.t1 AT1G79180 46.078 102 54 1 19 119 16 117 2.70e-24 99.4
MS.gene47262.t1 AT2G25230 44.554 101 54 2 21 120 28 127 3.09e-24 97.8
MS.gene47262.t1 AT1G18570 44.118 102 56 1 19 119 15 116 5.53e-24 99.4
MS.gene47262.t1 AT4G25560 46.078 102 54 1 19 119 12 113 5.65e-24 98.2
MS.gene47262.t1 AT3G27785 36.364 154 89 3 18 168 188 335 5.92e-24 100
MS.gene47262.t1 AT3G53200 45.192 104 54 2 19 120 11 113 7.18e-24 97.1
MS.gene47262.t1 AT5G14750 37.415 147 80 4 19 157 18 160 1.03e-23 95.5
MS.gene47262.t1 AT5G62470 40.000 105 63 0 19 123 14 118 1.40e-23 98.2
MS.gene47262.t1 AT4G26930 41.121 107 62 1 19 124 21 127 2.85e-23 97.8
MS.gene47262.t1 AT4G01680 42.308 104 59 1 19 121 14 117 3.07e-23 95.1
MS.gene47262.t1 AT4G28110 45.631 103 53 2 19 119 14 115 3.29e-23 96.3
MS.gene47262.t1 AT5G54230 45.098 102 55 1 19 119 14 115 3.53e-23 96.7
MS.gene47262.t1 AT4G17785 44.860 107 56 2 19 123 15 120 3.63e-23 97.1
MS.gene47262.t1 AT3G23250 37.931 145 76 2 19 162 14 145 3.91e-23 95.9
MS.gene47262.t1 AT4G17785 44.860 107 56 2 19 123 15 120 3.93e-23 97.1
MS.gene47262.t1 AT3G11440 42.056 107 61 1 19 124 43 149 4.09e-23 98.6
MS.gene47262.t1 AT3G11440 42.056 107 61 1 19 124 43 149 4.09e-23 98.6
MS.gene47262.t1 AT3G11440 42.056 107 61 1 19 124 43 149 4.09e-23 98.6
MS.gene47262.t1 AT3G11440 42.056 107 61 1 19 124 43 149 5.28e-23 97.8
MS.gene47262.t1 AT5G40330 44.118 102 56 1 19 119 14 115 7.19e-23 94.0
MS.gene47262.t1 AT3G12720 43.689 103 55 2 19 119 24 125 7.62e-23 95.5
MS.gene47262.t1 AT4G01680 42.308 104 59 1 19 121 14 117 1.23e-22 95.5
MS.gene47262.t1 AT3G47600 40.566 106 62 1 19 123 14 119 1.34e-22 95.5
MS.gene47262.t1 AT4G18770 43.137 102 58 0 18 119 216 317 1.38e-22 96.3
MS.gene47262.t1 AT1G63910 42.105 114 65 1 19 131 14 127 1.58e-22 95.5
MS.gene47262.t1 AT4G05100 44.118 102 56 1 19 119 15 116 1.84e-22 94.7
MS.gene47262.t1 AT1G56160 43.689 103 55 2 19 119 16 117 2.52e-22 94.0
MS.gene47262.t1 AT3G27920 40.171 117 63 2 4 119 7 117 2.66e-22 92.4
MS.gene47262.t1 AT5G52600 44.118 102 56 1 19 119 14 115 3.43e-22 91.7
MS.gene47262.t1 AT5G52260 46.552 116 55 3 19 128 14 128 3.54e-22 93.2
MS.gene47262.t1 AT5G62470 39.623 106 63 1 19 123 14 119 5.18e-22 94.0
MS.gene47262.t1 AT1G57560 32.749 171 95 4 19 172 14 181 6.32e-22 92.4
MS.gene47262.t1 AT3G02940 44.118 102 56 1 19 119 14 115 7.75e-22 92.8
MS.gene47262.t1 AT5G65230 45.631 103 53 2 19 119 14 115 8.41e-22 92.8
MS.gene47262.t1 AT5G06100 41.121 107 62 1 19 124 34 140 8.92e-22 94.7
MS.gene47262.t1 AT5G06100 41.121 107 62 1 19 124 34 140 8.92e-22 94.7
MS.gene47262.t1 AT5G06100 41.121 107 62 1 19 124 34 140 8.92e-22 94.7
MS.gene47262.t1 AT5G06100 41.121 107 62 1 19 124 34 140 8.92e-22 94.7
MS.gene47262.t1 AT5G12870 39.623 106 63 1 19 123 20 125 9.72e-22 92.0
MS.gene47262.t1 AT5G06100 41.121 107 62 1 19 124 34 140 9.77e-22 94.4
MS.gene47262.t1 AT5G10280 44.660 103 54 2 19 119 14 115 9.82e-22 92.8
MS.gene47262.t1 AT3G02940 44.118 102 56 1 19 119 14 115 1.26e-21 92.4
MS.gene47262.t1 AT3G02940 44.118 102 56 1 19 119 14 115 1.26e-21 92.4
MS.gene47262.t1 AT5G60890 40.000 105 62 1 19 122 14 118 1.31e-21 92.0
MS.gene47262.t1 AT1G74080 45.263 95 51 1 19 112 14 108 1.34e-21 92.4
MS.gene47262.t1 AT2G26960 43.269 104 58 1 19 121 22 125 1.53e-21 93.6
MS.gene47262.t1 AT4G01680 39.655 116 57 2 19 121 14 129 1.68e-21 92.4
MS.gene47262.t1 AT4G38620 34.868 152 92 2 19 169 14 159 1.93e-21 91.3
MS.gene47262.t1 AT5G57620 39.831 118 69 2 19 134 14 131 2.30e-21 92.0
MS.gene47262.t1 AT3G08500 41.346 104 60 1 19 121 32 135 2.42e-21 92.0
MS.gene47262.t1 AT1G74430 41.176 102 59 1 19 119 14 115 2.69e-21 90.9
MS.gene47262.t1 AT3G01140 41.176 102 59 1 19 119 14 115 2.79e-21 92.0
MS.gene47262.t1 AT5G16770 42.453 106 60 1 19 123 14 119 3.12e-21 91.7
MS.gene47262.t1 AT5G16770 42.453 106 60 1 19 123 14 119 3.12e-21 91.7
MS.gene47262.t1 AT3G01140 41.176 102 59 1 19 119 57 158 3.62e-21 92.0
MS.gene47262.t1 AT3G30210 39.669 121 66 2 19 132 29 149 3.80e-21 90.5
MS.gene47262.t1 AT2G26950 35.000 120 74 2 3 121 2 118 3.83e-21 92.0
MS.gene47262.t1 AT2G32460 41.346 104 60 1 19 121 20 123 4.01e-21 92.8
MS.gene47262.t1 AT2G32460 41.346 104 60 1 19 121 8 111 4.32e-21 92.4
MS.gene47262.t1 AT3G28910 41.176 102 59 1 19 119 14 115 4.46e-21 90.9
MS.gene47262.t1 AT5G16770 42.453 106 60 1 19 123 14 119 4.68e-21 91.3
MS.gene47262.t1 AT5G16770 42.453 106 60 1 19 123 14 119 4.68e-21 91.3
MS.gene47262.t1 AT1G16490 44.118 102 56 1 19 119 16 117 4.75e-21 90.1
MS.gene47262.t1 AT5G15310 41.748 103 57 2 19 119 14 115 4.77e-21 90.9
MS.gene47262.t1 AT1G08810 41.176 102 59 1 19 119 14 115 5.02e-21 90.1
MS.gene47262.t1 AT5G15310 41.748 103 57 2 19 119 14 115 5.12e-21 90.9
MS.gene47262.t1 AT1G74650 40.196 102 60 1 19 119 14 115 5.59e-21 90.9
MS.gene47262.t1 AT2G47190 41.509 106 61 1 19 123 22 127 6.15e-21 89.7
MS.gene47262.t1 AT1G34670 44.118 102 56 1 19 119 14 115 6.31e-21 91.3
MS.gene47262.t1 AT3G13890 39.640 111 57 2 19 119 14 124 7.84e-21 90.9
MS.gene47262.t1 AT3G12820 41.748 103 57 2 19 119 16 117 9.45e-21 88.6
MS.gene47262.t1 AT5G15310 41.748 103 57 2 19 119 14 115 9.61e-21 88.6
MS.gene47262.t1 AT5G14340 41.121 107 60 2 19 123 26 131 9.95e-21 89.4
MS.gene47262.t1 AT4G21440 44.118 102 56 1 19 119 14 115 1.00e-20 90.5
MS.gene47262.t1 AT3G46130 40.769 130 66 4 1 128 1 121 1.37e-20 88.6
MS.gene47262.t1 AT5G07690 42.574 101 57 1 19 118 14 114 1.52e-20 89.7
MS.gene47262.t1 AT5G59780 41.509 106 59 2 19 122 10 114 1.61e-20 87.8
MS.gene47262.t1 AT5G07700 42.157 102 58 1 19 119 14 115 1.74e-20 89.7
MS.gene47262.t1 AT5G07700 42.157 102 58 1 19 119 14 115 1.74e-20 89.7
MS.gene47262.t1 AT5G61420 40.952 105 61 1 19 122 14 118 1.95e-20 89.7
MS.gene47262.t1 AT3G13890 40.196 102 60 1 19 119 14 115 2.08e-20 89.7
MS.gene47262.t1 AT5G26660 41.905 105 58 2 19 121 14 117 2.12e-20 89.7
MS.gene47262.t1 AT1G57560 41.748 103 57 2 19 119 14 115 2.48e-20 89.0
MS.gene47262.t1 AT1G68320 39.623 106 63 1 19 123 21 126 3.28e-20 88.2
MS.gene47262.t1 AT5G56110 43.137 102 57 1 19 119 14 115 3.30e-20 88.6
MS.gene47262.t1 AT2G31180 41.176 102 59 1 19 119 14 115 3.39e-20 87.4
MS.gene47262.t1 AT1G25340 40.000 105 59 1 19 123 20 120 4.11e-20 87.8
MS.gene47262.t1 AT1G25340 39.623 106 63 1 19 123 20 125 4.21e-20 87.8
MS.gene47262.t1 AT1G25340 40.000 105 59 1 19 123 20 120 4.78e-20 87.8
MS.gene47262.t1 AT4G00540 36.607 112 68 1 19 127 103 214 5.58e-20 89.0
MS.gene47262.t1 AT5G65790 42.718 103 57 2 19 119 14 116 7.18e-20 88.2
MS.gene47262.t1 AT1G09540 41.509 106 59 2 19 122 14 118 8.17e-20 88.2
MS.gene47262.t1 AT1G35515 40.196 102 60 1 19 119 14 115 8.37e-20 85.5
MS.gene47262.t1 AT3G49690 43.689 103 56 2 19 119 14 116 8.69e-20 87.4
MS.gene47262.t1 AT1G18710 38.235 102 62 1 19 119 14 115 9.18e-20 86.7
MS.gene47262.t1 AT4G00540 36.607 112 68 1 19 127 101 212 1.00e-19 88.6
MS.gene47262.t1 AT1G79180 34.815 135 54 1 19 119 16 150 1.00e-19 87.4
MS.gene47262.t1 AT5G55020 39.252 107 64 1 19 124 28 134 1.79e-19 87.8
MS.gene47262.t1 AT1G22640 42.157 102 58 1 19 119 14 115 2.16e-19 85.1
MS.gene47262.t1 AT5G40430 33.108 148 86 3 19 163 54 191 2.52e-19 85.1
MS.gene47262.t1 AT5G14750 38.938 113 58 3 52 157 18 126 2.94e-19 82.8
MS.gene47262.t1 AT5G35550 45.263 95 51 1 19 112 16 110 3.68e-19 84.7
MS.gene47262.t1 AT3G60460 40.187 107 62 2 19 123 13 119 3.85e-19 85.5
MS.gene47262.t1 AT5G16600 32.370 173 102 4 19 189 14 173 4.89e-19 85.5
MS.gene47262.t1 AT4G09460 39.216 102 61 1 19 119 14 115 5.96e-19 83.6
MS.gene47262.t1 AT2G16720 40.196 102 60 1 19 119 14 115 7.11e-19 84.0
MS.gene47262.t1 AT1G48000 37.719 114 70 1 19 131 34 147 7.69e-19 83.6
MS.gene47262.t1 AT3G53200 52.174 69 33 0 52 120 12 80 1.13e-18 82.0
MS.gene47262.t1 AT4G34990 41.176 102 59 1 19 119 14 115 1.32e-18 83.6
MS.gene47262.t1 AT5G23000 40.777 103 59 2 19 119 14 116 1.64e-18 84.0
MS.gene47262.t1 AT3G28470 44.211 95 52 1 19 112 14 108 2.00e-18 83.6
MS.gene47262.t1 AT3G13540 38.889 108 64 2 14 119 19 126 2.40e-18 82.4
MS.gene47262.t1 AT1G66230 39.252 107 62 2 19 123 14 119 3.61e-18 82.4
MS.gene47262.t1 AT5G49330 40.196 102 60 1 19 119 14 115 3.86e-18 83.2
MS.gene47262.t1 AT5G40350 41.053 95 55 1 19 112 19 113 4.86e-18 80.9
MS.gene47262.t1 AT1G06180 40.777 103 58 2 19 119 14 115 5.19e-18 81.3
MS.gene47262.t1 AT3G01530 40.594 101 59 1 19 118 27 127 5.22e-18 80.5
MS.gene47262.t1 AT4G12350 34.752 141 88 3 19 157 14 152 5.86e-18 82.0
MS.gene47262.t1 AT5G49620 39.623 106 63 1 19 123 28 133 6.08e-18 82.0
MS.gene47262.t1 AT3G18100 43.182 88 50 0 19 106 498 585 8.57e-18 83.2
MS.gene47262.t1 AT3G18100 32.292 96 63 2 18 112 446 540 4.77e-11 63.2
MS.gene47262.t1 AT3G18100 43.182 88 50 0 19 106 546 633 8.71e-18 83.2
MS.gene47262.t1 AT3G18100 32.292 96 63 2 18 112 494 588 5.62e-11 63.2
MS.gene47262.t1 AT3G61250 37.864 103 61 2 19 119 14 115 9.11e-18 81.6
MS.gene47262.t1 AT2G02820 36.585 123 69 1 22 135 33 155 9.51e-18 82.0
MS.gene47262.t1 AT3G24310 37.391 115 69 2 19 131 20 133 9.67e-18 80.9
MS.gene47262.t1 AT1G66370 37.143 105 65 1 19 122 10 114 9.91e-18 80.5
MS.gene47262.t1 AT3G18100 43.182 88 50 0 19 106 333 420 1.30e-17 82.8
MS.gene47262.t1 AT3G18100 32.292 96 63 2 18 112 281 375 7.51e-11 62.4
MS.gene47262.t1 AT3G27810 37.168 113 68 2 19 128 22 134 1.33e-17 79.7
MS.gene47262.t1 AT3G18100 43.182 88 50 0 19 106 385 472 1.43e-17 82.4
MS.gene47262.t1 AT3G18100 32.292 96 63 2 18 112 333 427 9.03e-11 62.4
MS.gene47262.t1 AT2G02820 36.585 123 69 1 22 135 33 155 1.49e-17 82.0
MS.gene47262.t1 AT3G12820 50.000 68 34 0 52 119 2 69 1.49e-17 79.0
MS.gene47262.t1 AT2G02820 36.585 123 69 1 22 135 33 155 2.11e-17 82.0
MS.gene47262.t1 AT4G13480 39.048 105 61 2 19 121 8 111 3.28e-17 79.3
MS.gene47262.t1 AT1G56650 33.758 157 97 3 12 164 3 156 3.40e-17 79.0
MS.gene47262.t1 AT3G06490 39.252 107 62 2 19 123 21 126 3.60e-17 80.1
MS.gene47262.t1 AT4G37780 38.532 109 62 3 19 125 14 119 8.05e-17 79.0
MS.gene47262.t1 AT4G22680 35.714 140 85 3 19 156 14 150 9.87e-17 78.2
MS.gene47262.t1 AT2G37630 37.383 107 64 1 19 122 4 110 1.01e-16 79.3
MS.gene47262.t1 AT2G47460 35.000 120 77 1 19 137 14 133 1.29e-16 79.0
MS.gene47262.t1 AT5G26660 46.835 79 41 1 44 121 8 86 1.47e-16 78.6
MS.gene47262.t1 AT2G36890 40.777 103 59 2 19 119 55 157 2.36e-16 78.2
MS.gene47262.t1 AT2G36890 40.777 103 59 2 19 119 14 116 2.37e-16 77.4
MS.gene47262.t1 AT1G66380 38.532 109 66 1 12 119 3 111 3.02e-16 73.9
MS.gene47262.t1 AT5G59780 46.479 71 38 0 52 122 23 93 3.52e-16 75.5
MS.gene47262.t1 AT3G62610 37.255 102 63 1 19 119 14 115 5.20e-16 77.0
MS.gene47262.t1 AT3G46130 44.156 77 43 0 52 128 23 99 5.33e-16 75.5
MS.gene47262.t1 AT3G46130 44.156 77 43 0 52 128 13 89 5.50e-16 75.5
MS.gene47262.t1 AT5G62320 38.182 110 58 3 19 119 15 123 8.17e-16 75.1
MS.gene47262.t1 AT3G47600 44.444 72 40 0 52 123 42 113 1.35e-15 75.9
MS.gene47262.t1 AT5G35550 54.839 62 28 0 52 113 53 114 2.35e-15 74.3
MS.gene47262.t1 AT1G14350 35.000 100 65 0 22 121 28 127 3.20e-15 75.5
MS.gene47262.t1 AT1G14350 35.000 100 65 0 22 121 28 127 3.20e-15 75.5
MS.gene47262.t1 AT5G40350 49.180 61 31 0 52 112 8 68 3.28e-15 72.0
MS.gene47262.t1 AT1G66390 38.532 109 66 1 12 119 3 111 3.50e-15 73.6
MS.gene47262.t1 AT3G27810 41.772 79 44 1 52 128 7 85 7.87e-15 71.2
MS.gene47262.t1 AT5G49620 35.000 120 63 2 19 123 28 147 2.10e-14 72.4
MS.gene47262.t1 AT5G14750 33.981 103 57 3 62 157 1 99 8.15e-12 62.0
MS.gene47262.t1 AT5G14750 33.981 103 57 3 62 157 1 99 8.15e-12 62.0
MS.gene47262.t1 AT1G66380 47.826 69 36 0 52 120 11 79 1.10e-11 60.8
MS.gene47262.t1 AT3G23250 34.653 101 53 1 62 162 1 88 8.67e-11 60.8
MS.gene47262.t1 AT1G09770 31.655 139 87 4 20 154 8 142 9.85e-11 62.4

Find 54 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACAATGAATCAATTT+TGG 0.098317 6.3:+18761725 MS.gene47262:CDS
AAGGAAGAAAATGAGAAATT+TGG 0.160898 6.3:+18760134 MS.gene47262:CDS
CTAGCTACATTATTCTTTCC+TGG 0.241589 6.3:-18761003 None:intergenic
AAGGGAAAAGTTGCAGATTA+AGG 0.276686 6.3:+18760749 MS.gene47262:intron
GTGTCATTTATTGACTTTCT+TGG 0.290615 6.3:+18761780 MS.gene47262:CDS
TCTCATTGCACTGCAAATTC+TGG 0.302223 6.3:-18761601 None:intergenic
TTGCATGCTCATACACTTCA+TGG 0.308993 6.3:+18760838 MS.gene47262:CDS
AAAGCTGCTCTATTGATTCT+AGG 0.313747 6.3:-18760790 None:intergenic
AACACCAAGCTTTCCATTAG+AGG 0.318928 6.3:+18760158 MS.gene47262:CDS
CACATTTGCAAATTCTTTCC+TGG 0.321921 6.3:+18760874 MS.gene47262:CDS
TAGCTTTCTCTTTCTTGAAA+TGG 0.335783 6.3:-18760968 None:intergenic
CATACTCATTTGTGAATCAT+AGG 0.343634 6.3:-18761115 None:intergenic
TGGTCTCCAATGACCTCTAA+TGG 0.346646 6.3:-18760171 None:intergenic
AGTGCATTGTCTGTCCTTCC+AGG 0.351387 6.3:-18760892 None:intergenic
ATGAATTTGGTCCTCACAAT+TGG 0.357978 6.3:+18760225 MS.gene47262:CDS
AGGAAGAAAATGAGAAATTT+GGG 0.359459 6.3:+18760135 MS.gene47262:CDS
AGCTTTCCATTAGAGGTCAT+TGG 0.384561 6.3:+18760165 MS.gene47262:CDS
TGAGTTTGAATATGAATGAT+TGG 0.387864 6.3:-18761670 None:intergenic
ATAGAAAGAAAGGTAGAAGT+AGG 0.391467 6.3:+18761564 MS.gene47262:CDS
CCAATCTCAACCTCACTACT+AGG 0.403128 6.3:+18761073 MS.gene47262:CDS
AAATGTGAGAGATAAGATTA+AGG 0.412885 6.3:+18761758 MS.gene47262:CDS
TAGCTACATTATTCTTTCCT+GGG 0.420815 6.3:-18761002 None:intergenic
AGGCTTACTTATAGAAAGAA+AGG 0.428586 6.3:+18761554 MS.gene47262:intron
AAGGTAGAAGTAGGGGACTA+TGG 0.428911 6.3:+18761573 MS.gene47262:CDS
GTTGAGTTAGATTCATCAAA+CGG 0.452201 6.3:-18761045 None:intergenic
CCTAGTAGTGAGGTTGAGAT+TGG 0.475467 6.3:-18761073 None:intergenic
TAGAAAGAAAGGTAGAAGTA+GGG 0.480588 6.3:+18761565 MS.gene47262:CDS
ATACACTTCATGGTAACAAA+TGG 0.493137 6.3:+18760848 MS.gene47262:CDS
TCTTGGAGTAGGTGATACAT+AGG 0.495278 6.3:+18761797 MS.gene47262:CDS
GAACAAATACATGGAAGATC+GGG 0.507355 6.3:+18760260 MS.gene47262:CDS
TTTATTGACTTTCTTGGAGT+AGG 0.507502 6.3:+18761786 MS.gene47262:CDS
AAGCTAACATTTCAAATCCC+AGG 0.510479 6.3:+18760985 MS.gene47262:CDS
TGAACAAATACATGGAAGAT+CGG 0.519885 6.3:+18760259 MS.gene47262:CDS
TTGAATATGAATGATTGGAT+TGG 0.524412 6.3:-18761665 None:intergenic
ATGACCTCTAATGGAAAGCT+TGG 0.534815 6.3:-18760162 None:intergenic
TCATTTGTGAATCATAGGCT+TGG 0.536300 6.3:-18761110 None:intergenic
AGAAAGAAAGGTAGAAGTAG+GGG 0.536632 6.3:+18761566 MS.gene47262:CDS
CTTGGAGTAGGTGATACATA+GGG 0.552083 6.3:+18761798 MS.gene47262:CDS
TTAAGCTTAGCATCTTCAGA+TGG 0.553691 6.3:-18760191 None:intergenic
TTCATCAAACGGATTTGTGA+TGG 0.555045 6.3:-18761034 None:intergenic
AGGTTGTTCTCAAGGTCACA+TGG 0.563554 6.3:+18761623 MS.gene47262:CDS
TGATCATGGCTAGGAAGCAA+AGG 0.567964 6.3:+18760932 MS.gene47262:CDS
AACATTGCTGAACAAATACA+TGG 0.572771 6.3:+18760251 MS.gene47262:CDS
GCAATGAGAGGTTGTTCTCA+AGG 0.574721 6.3:+18761615 MS.gene47262:CDS
TTTGCAAATTCTTTCCTGGA+AGG 0.574934 6.3:+18760878 MS.gene47262:CDS
CTTGTCAATGAAAGTTGACA+AGG 0.581911 6.3:+18760115 None:intergenic
GATCATGGCTAGGAAGCAAA+GGG 0.587417 6.3:+18760933 MS.gene47262:CDS
GCAATGTTGTTCCAATTGTG+AGG 0.589775 6.3:-18760236 None:intergenic
TAGGCTTGGTAATTAAGCAA+AGG 0.630274 6.3:-18761096 None:intergenic
CATGGGAAAGCTTAAGAGTG+TGG 0.638298 6.3:+18761641 MS.gene47262:CDS
GGAAAAGTTGCAGATTAAGG+TGG 0.645857 6.3:+18760752 MS.gene47262:CDS
TAAGCAAAGGCCTAGTAGTG+AGG 0.652290 6.3:-18761083 None:intergenic
AGAATTTGCAGTGCAATGAG+AGG 0.669530 6.3:+18761603 MS.gene47262:CDS
GGTTGTTCTCAAGGTCACAT+GGG 0.692971 6.3:+18761624 MS.gene47262:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGTCAAATAAATTAATAT+AGG - chr6.3:18761490-18761509 None:intergenic 10.0%
!!! AAAAATTGAATATTTTCAAA+AGG + chr6.3:18760432-18760451 MS.gene47262:intron 10.0%
!!! TTTTTGTGTTTTATTTTTTT+AGG + chr6.3:18761534-18761553 MS.gene47262:intron 10.0%
!!! AAAATTTTGAAGCAATTTAA+AGG - chr6.3:18761431-18761450 None:intergenic 15.0%
!!! TCATTTGTAATATTTTTTGA+AGG + chr6.3:18760677-18760696 MS.gene47262:intron 15.0%
!! CAAATATAGTAGTATTACAT+TGG + chr6.3:18761223-18761242 MS.gene47262:intron 20.0%
!! CAATGTAATACTACTATATT+TGG - chr6.3:18761225-18761244 None:intergenic 20.0%
!! TTAATTACCATTATCACAAA+AGG - chr6.3:18760730-18760749 None:intergenic 20.0%
!!! AAAAAACTTGTTGATGAATT+TGG + chr6.3:18760212-18760231 MS.gene47262:CDS 20.0%
!!! AATTTGTTATGTTCTAGTTT+AGG - chr6.3:18760292-18760311 None:intergenic 20.0%
!!! AATTTTGTTATTTTCTCTCA+TGG + chr6.3:18761445-18761464 MS.gene47262:intron 20.0%
!!! ATGAACAATGAATCAATTTT+GGG + chr6.3:18761726-18761745 MS.gene47262:CDS 20.0%
!!! TTGTGATAATGGTAATTAAA+GGG + chr6.3:18760731-18760750 MS.gene47262:intron 20.0%
!!! TTTGTGATAATGGTAATTAA+AGG + chr6.3:18760730-18760749 MS.gene47262:intron 20.0%
! AAACACAAAAATCAACAACA+TGG - chr6.3:18761525-18761544 None:intergenic 25.0%
! AAATGTGAGAGATAAGATTA+AGG + chr6.3:18761758-18761777 MS.gene47262:CDS 25.0%
! AAGGAAGAAAATGAGAAATT+TGG + chr6.3:18760134-18760153 MS.gene47262:CDS 25.0%
! AGGAAGAAAATGAGAAATTT+GGG + chr6.3:18760135-18760154 MS.gene47262:CDS 25.0%
! ATTATAATCGCTGTTAAATG+CGG - chr6.3:18761402-18761421 None:intergenic 25.0%
! TGAGTTTGAATATGAATGAT+TGG - chr6.3:18761673-18761692 None:intergenic 25.0%
! TTGAATATGAATGATTGGAT+TGG - chr6.3:18761668-18761687 None:intergenic 25.0%
!! CATGAACAATGAATCAATTT+TGG + chr6.3:18761725-18761744 MS.gene47262:CDS 25.0%
AACATTGCTGAACAAATACA+TGG + chr6.3:18760251-18760270 MS.gene47262:CDS 30.0%
AGGCTTACTTATAGAAAGAA+AGG + chr6.3:18761554-18761573 MS.gene47262:intron 30.0%
ATACACTTCATGGTAACAAA+TGG + chr6.3:18760848-18760867 MS.gene47262:CDS 30.0%
ATAGAAAGAAAGGTAGAAGT+AGG + chr6.3:18761564-18761583 MS.gene47262:CDS 30.0%
CATACTCATTTGTGAATCAT+AGG - chr6.3:18761118-18761137 None:intergenic 30.0%
CATTTGATAAGCTAAAGTGA+AGG - chr6.3:18761149-18761168 None:intergenic 30.0%
GGTTAACATGACTCAAATAT+AGG + chr6.3:18761341-18761360 MS.gene47262:intron 30.0%
GTATTACATTGGAAATTGTG+CGG + chr6.3:18761234-18761253 MS.gene47262:intron 30.0%
GTTGAGTTAGATTCATCAAA+CGG - chr6.3:18761048-18761067 None:intergenic 30.0%
TAGAAAGAAAGGTAGAAGTA+GGG + chr6.3:18761565-18761584 MS.gene47262:CDS 30.0%
TAGCTACATTATTCTTTCCT+GGG - chr6.3:18761005-18761024 None:intergenic 30.0%
TAGCTTTCTCTTTCTTGAAA+TGG - chr6.3:18760971-18760990 None:intergenic 30.0%
TGAACAAATACATGGAAGAT+CGG + chr6.3:18760259-18760278 MS.gene47262:CDS 30.0%
! GAATCATTTTCATGTGATCA+TGG + chr6.3:18760918-18760937 MS.gene47262:CDS 30.0%
! TGAGTTTCCTTTTGTGATAA+TGG + chr6.3:18760720-18760739 MS.gene47262:intron 30.0%
! TTACTCTTTTTGCACTTTTG+TGG - chr6.3:18761266-18761285 None:intergenic 30.0%
!! GTGTCATTTATTGACTTTCT+TGG + chr6.3:18761780-18761799 MS.gene47262:CDS 30.0%
!! TATATCGATTCTAACGCAAT+TGG + chr6.3:18760531-18760550 MS.gene47262:intron 30.0%
!! TTTATTGACTTTCTTGGAGT+AGG + chr6.3:18761786-18761805 MS.gene47262:CDS 30.0%
AAATGCTAACTAGTGTCACA+GGG + chr6.3:18761183-18761202 MS.gene47262:intron 35.0%
AAGCTAACATTTCAAATCCC+AGG + chr6.3:18760985-18761004 MS.gene47262:CDS 35.0%
AAGGGAAAAGTTGCAGATTA+AGG + chr6.3:18760749-18760768 MS.gene47262:intron 35.0%
AGAAAGAAAGGTAGAAGTAG+GGG + chr6.3:18761566-18761585 MS.gene47262:CDS 35.0%
ATGAATTTGGTCCTCACAAT+TGG + chr6.3:18760225-18760244 MS.gene47262:CDS 35.0%
ATGACTCAAATATAGGTCTG+CGG + chr6.3:18761348-18761367 MS.gene47262:intron 35.0%
CACATTTGCAAATTCTTTCC+TGG + chr6.3:18760874-18760893 MS.gene47262:CDS 35.0%
CTAGCTACATTATTCTTTCC+TGG - chr6.3:18761006-18761025 None:intergenic 35.0%
GAACAAATACATGGAAGATC+GGG + chr6.3:18760260-18760279 MS.gene47262:CDS 35.0%
GCAACTTCAATTGAATATCG+TGG - chr6.3:18761374-18761393 None:intergenic 35.0%
TCATTTGTGAATCATAGGCT+TGG - chr6.3:18761113-18761132 None:intergenic 35.0%
TTAAGCTTAGCATCTTCAGA+TGG - chr6.3:18760194-18760213 None:intergenic 35.0%
TTTGCAAATTCTTTCCTGGA+AGG + chr6.3:18760878-18760897 MS.gene47262:CDS 35.0%
! ATTTTCATGTGATCATGGCT+AGG + chr6.3:18760923-18760942 MS.gene47262:CDS 35.0%
! TAGGCTTGGTAATTAAGCAA+AGG - chr6.3:18761099-18761118 None:intergenic 35.0%
! TTCATCAAACGGATTTGTGA+TGG - chr6.3:18761037-18761056 None:intergenic 35.0%
!! AAAGCTGCTCTATTGATTCT+AGG - chr6.3:18760793-18760812 None:intergenic 35.0%
AACACCAAGCTTTCCATTAG+AGG + chr6.3:18760158-18760177 MS.gene47262:CDS 40.0%
AGAATTTGCAGTGCAATGAG+AGG + chr6.3:18761603-18761622 MS.gene47262:CDS 40.0%
AGCTTTCCATTAGAGGTCAT+TGG + chr6.3:18760165-18760184 MS.gene47262:CDS 40.0%
ATGACCTCTAATGGAAAGCT+TGG - chr6.3:18760165-18760184 None:intergenic 40.0%
GAAATGCTAACTAGTGTCAC+AGG + chr6.3:18761182-18761201 MS.gene47262:intron 40.0%
GCAATGTTGTTCCAATTGTG+AGG - chr6.3:18760239-18760258 None:intergenic 40.0%
GGAAAAGTTGCAGATTAAGG+TGG + chr6.3:18760752-18760771 MS.gene47262:CDS 40.0%
TCGATTCTAACGCAATTGGT+TGG + chr6.3:18760535-18760554 MS.gene47262:intron 40.0%
TCTCATTGCACTGCAAATTC+TGG - chr6.3:18761604-18761623 None:intergenic 40.0%
TTGCATGCTCATACACTTCA+TGG + chr6.3:18760838-18760857 MS.gene47262:CDS 40.0%
! AGCTTTTAGTGAGGAAGAAG+AGG + chr6.3:18760807-18760826 MS.gene47262:CDS 40.0%
! CAATAGAGCAGCTTTTAGTG+AGG + chr6.3:18760798-18760817 MS.gene47262:CDS 40.0%
AAGGTAGAAGTAGGGGACTA+TGG + chr6.3:18761573-18761592 MS.gene47262:CDS 45.0%
AGGTTGTTCTCAAGGTCACA+TGG + chr6.3:18761623-18761642 MS.gene47262:CDS 45.0%
CATGGGAAAGCTTAAGAGTG+TGG + chr6.3:18761641-18761660 MS.gene47262:CDS 45.0%
CCAATCTCAACCTCACTACT+AGG + chr6.3:18761073-18761092 MS.gene47262:CDS 45.0%
CCTAGTAGTGAGGTTGAGAT+TGG - chr6.3:18761076-18761095 None:intergenic 45.0%
GATCATGGCTAGGAAGCAAA+GGG + chr6.3:18760933-18760952 MS.gene47262:CDS 45.0%
GCAATGAGAGGTTGTTCTCA+AGG + chr6.3:18761615-18761634 MS.gene47262:CDS 45.0%
GGTTGTTCTCAAGGTCACAT+GGG + chr6.3:18761624-18761643 MS.gene47262:CDS 45.0%
TAAGCAAAGGCCTAGTAGTG+AGG - chr6.3:18761086-18761105 None:intergenic 45.0%
TGATCATGGCTAGGAAGCAA+AGG + chr6.3:18760932-18760951 MS.gene47262:CDS 45.0%
TGGTCTCCAATGACCTCTAA+TGG - chr6.3:18760174-18760193 None:intergenic 45.0%
ACTTCTTCAACCAGTGCTCC+GGG + chr6.3:18761312-18761331 MS.gene47262:intron 50.0%
AGTGCATTGTCTGTCCTTCC+AGG - chr6.3:18760895-18760914 None:intergenic 50.0%
GACTTCTTCAACCAGTGCTC+CGG + chr6.3:18761311-18761330 MS.gene47262:intron 50.0%
GTCATGTTAACCAGTGTCCC+CGG - chr6.3:18761333-18761352 None:intergenic 50.0%
CTTCTTCAACCAGTGCTCCG+GGG + chr6.3:18761313-18761332 MS.gene47262:intron 55.0%
AACCAGTGCTCCGGGGACAC+TGG + chr6.3:18761320-18761339 MS.gene47262:intron 65.0%
AACCAGTGTCCCCGGAGCAC+TGG - chr6.3:18761325-18761344 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 18760122 18761818 18760122 ID=MS.gene47262
chr6.3 mRNA 18760122 18761818 18760122 ID=MS.gene47262.t1;Parent=MS.gene47262
chr6.3 exon 18760122 18760281 18760122 ID=MS.gene47262.t1.exon1;Parent=MS.gene47262.t1
chr6.3 CDS 18760122 18760281 18760122 ID=cds.MS.gene47262.t1;Parent=MS.gene47262.t1
chr6.3 exon 18760752 18761132 18760752 ID=MS.gene47262.t1.exon2;Parent=MS.gene47262.t1
chr6.3 CDS 18760752 18761132 18760752 ID=cds.MS.gene47262.t1;Parent=MS.gene47262.t1
chr6.3 exon 18761556 18761818 18761556 ID=MS.gene47262.t1.exon3;Parent=MS.gene47262.t1
chr6.3 CDS 18761556 18761818 18761556 ID=cds.MS.gene47262.t1;Parent=MS.gene47262.t1
Gene Sequence

>MS.gene47262

ATGAAAGTTGACAAGGAAGAAAATGAGAAATTTGGGAACACCAAGCTTTCCATTAGAGGTCATTGGAGACCATCTGAAGATGCTAAGCTTAAAAAACTTGTTGATGAATTTGGTCCTCACAATTGGAACAACATTGCTGAACAAATACATGGAAGATCGGGTATAATCCTAAACTAGAACATAACAAATTTTATTTATTGAAATTTCAAAAAGATTACTAATTTTTTTTTTTTATATCAAAGTTGTCTTAATAATGTAAATAGTTAACTTTCATTTATTTATTTTTTTGACAAGAAGTTTTATTTAAAAAAAAAATTGAATATTTTCAAAAGGTGCTTTTAATATATTTATTAAAATTGCATTAGTATTGTTTTTTGAATGAAATTCTCTTTAATTTGAATTATTTTTTTATATCGATTCTAACGCAATTGGTTGGTGCACAGTGATGATTTTGTTTTTTTTTTTTTTATGACAGTGTTATAATCATTTTTTTAATTTATTTTTTAAACATCTTGATGTTAGATTTAAATTGTGTTTTCAAGATTTATATTTAATTCATTTGTAATATTTTTTGAAGGAGTTTATGTAATGTAACATTTGAGTTTCCTTTTGTGATAATGGTAATTAAAGGGAAAAGTTGCAGATTAAGGTGGTGTAATCAGCTAGATCCTAGAATCAATAGAGCAGCTTTTAGTGAGGAAGAAGAGGAGAAGCTTTTGCATGCTCATACACTTCATGGTAACAAATGGTCACACATTTGCAAATTCTTTCCTGGAAGGACAGACAATGCACTGAAGAATCATTTTCATGTGATCATGGCTAGGAAGCAAAGGGAACTATTATCATCCATTTCAAGAAAGAGAAAGCTAACATTTCAAATCCCAGGAAAGAATAATGTAGCTAGCAAATCAGCCATCACAAATCCGTTTGATGAATCTAACTCAACTTGCACCAATCTCAACCTCACTACTAGGCCTTTGCTTAATTACCAAGCCTATGATTCACAAATGAGTATGCGTTGAATCCTTCACTTTAGCTTATCAAATGATTTTAAATATGAGAAATGCTAACTAGTGTCACAGGGATATTGATTAAGAAAGCCAAATATAGTAGTATTACATTGGAAATTGTGCGGTCAATGCCACAAAAGTGCAAAAAGAGTAATTTTCAACTTAAAACTTCATCTTTTGACTTCTTCAACCAGTGCTCCGGGGACACTGGTTAACATGACTCAAATATAGGTCTGCGGCCACGATATTCAATTGAAGTTGCATCGACCGCATTTAACAGCGATTATAATTTAAAACCTTTAAATTGCTTCAAAATTTTGTTATTTTCTCTCATGGCTTAATATACACTAAATATCCTATATTAATTTATTTGACATATGCTATATATGACCATGTTGTTGATTTTTGTGTTTTATTTTTTTAGGCTTACTTATAGAAAGAAAGGTAGAAGTAGGGGACTATGGTTTTGCCAGAATTTGCAGTGCAATGAGAGGTTGTTCTCAAGGTCACATGGGAAAGCTTAAGAGTGTGGACCAATCCAATCATTCATATTCAAACTCAGAAGTTTCAGTATCTGAGTCAGTTGCAACAAACATGAACAATGAATCAATTTTGGGAGAAAGTGAAAATGTGAGAGATAAGATTAAGGTGTCATTTATTGACTTTCTTGGAGTAGGTGATACATAG
Protein sequence

>MS.gene47262.t1

MKVDKEENEKFGNTKLSIRGHWRPSEDAKLKKLVDEFGPHNWNNIAEQIHGRSGKSCRLRWCNQLDPRINRAAFSEEEEEKLLHAHTLHGNKWSHICKFFPGRTDNALKNHFHVIMARKQRELLSSISRKRKLTFQIPGKNNVASKSAITNPFDESNSTCTNLNLTTRPLLNYQAYDSQMSLLIERKVEVGDYGFARICSAMRGCSQGHMGKLKSVDQSNHSYSNSEVSVSESVATNMNNESILGESENVRDKIKVSFIDFLGVGDT